mRNA_H-canaliculatus_F_contig1224.1923.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1224.1923.1
Unique NamemRNA_H-canaliculatus_F_contig1224.1923.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1923.1 vs. uniprot
Match: D7FVP5_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVP5_ECTSI)

HSP 1 Score: 494 bits (1272), Expect = 5.230e-162
Identity = 287/441 (65.08%), Postives = 325/441 (73.70%), Query Frame = 2 
Query: 1193 VKVMTKAPTIEIKAAIVVQAEIDTLARMQHPFIVHLFAVHQDDARCMLVLEYAAGGELLHRIRKRLRLPDGEAKFYAAEIADALQYMHNEAGIIYHDLKPENILLAADGHVKVVDFGLALDAEAKQWDECRMGTSMYMAPELANHRVQGAHAPAVDWWSFGCVVYEMLSGTLPFGDSADLSKYEIYTNITEKRLRFGKVFRSRSRGLLKRLLDKNPETRMSWDGVKEHKWFRNVDWVALHNRRIFPPWIPPTMKPGCTECFLRWKPEXXXXXXXXXXXXXXXXXXXXGGGDKQHPIHHPSLSDQVLQHECYYTRIKIPPGCTLRPPXXXXQSPAPGQTRRDGSREMNGASSNFQRAAIEPAVRRSSLKNNARAPLATGRHSASLLDHSAAVSSNKRSSDDGEGGEGGMEEEGVDVAAPPRRTPSGPRAAGMRRGASSPQLR 2515
            VKVMTKA   E ++ +V+QAEIDTLARMQHPFIVHLF VHQDD RCMLVLEYAAGGELL+RIR RLRLPD EAKFYAAEIADALQYMHNE GIIYHDLKPENILLAADGHVKVVDFGLALD EA++WDECRMGTS YMAPELA HRVQGAHAPAVDWWSFGCVVYE+L G  PFGDSADL+KYEIYTNITEK+LRFGK F +R+RGLL+RLLDKNP TR+ W GV+EHKWFRNVDWVAL +RRIFPPW+PP+MKPGCT+CFL+WKPE    XXXXXXXXXXXXX      D+ HP      +D+   HE  Y+R+K+PPG  LRPP XX Q P  G+  +   R+ +  +     AA  P  RR   +                L ++ A ++          GEG    +GVDV     RTPSG R  G  R AS+PQ R
Sbjct:   69 VKVMTKARVSERRSILVIQAEIDTLARMQHPFIVHLFGVHQDDVRCMLVLEYAAGGELLYRIRARLRLPDAEAKFYAAEIADALQYMHNEVGIIYHDLKPENILLAADGHVKVVDFGLALDKEAREWDECRMGTSAYMAPELAKHRVQGAHAPAVDWWSFGCVVYELLGGCSPFGDSADLTKYEIYTNITEKKLRFGKGFGARARGLLRRLLDKNPATRLGWQGVQEHKWFRNVDWVALRDRRIFPPWVPPSMKPGCTQCFLQWKPEPPAGXXXXXXXXXXXXX------DQSHPP-----ADRA--HE--YSRVKVPPGYALRPPPXX-QPPVAGERLQ---RQADIVAQAPAAAAWHPWTRRPPPR----------------LANAVATTAKV--------GEG----QGVDVRT--ARTPSGRRGQGTPRDASNPQAR 460
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1923.1 vs. uniprot
Match: A0A6H5KU84_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU84_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 1.040e-121
Identity = 188/240 (78.33%), Postives = 207/240 (86.25%), Query Frame = 2 
Query: 1187 DQVKVMTKAPTIEIKAAIVVQAEIDTLARMQHPFIVHLFAVHQDDARCMLVLEYAAGGELLHRIRKRLRLPDGEAKFYAAEIADALQYMHNEA------------GIIYHDLKPENILLAADGHVKVVDFGLALDAEAKQWDECRMGTSMYMAPELANHRVQGAHAPAVDWWSFGCVVYEMLSGTLPFGDSADLSKYEIYTNITEKRLRFGKVFRSRSRGLLKRLLDKNPETRMSWDGVK 1870
            +QVKVMTKA   E ++ +V+QAEIDTLARMQHPFIVHLF VHQDD RCMLVLEYAAGGELLHRI+ RLRLPD EAKFYAAEIADALQYMHNE             GIIYHDLKPENILLAADGHVKVVDFGLALD EA++WDECRMGTS YMAPELA ++VQGAHAPAVDWWSFGCVVYE+L G  PFGDSADL+KYEIYTNITEK+LRFGK F +++RGLL+RLLDKNP TR+ W GV+
Sbjct:    8 EQVKVMTKARVSEGRSILVIQAEIDTLARMQHPFIVHLFGVHQDDVRCMLVLEYAAGGELLHRIQTRLRLPDAEAKFYAAEIADALQYMHNEVPLTLNPRSQSKVGIIYHDLKPENILLAADGHVKVVDFGLALDKEARKWDECRMGTSAYMAPELAKYKVQGAHAPAVDWWSFGCVVYELLGGCSPFGDSADLTKYEIYTNITEKKLRFGKGFGAKARGLLRRLLDKNPATRLGWQGVQ 247
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1923.1 vs. uniprot
Match: C5M1E1_PERM5 (cAMP-dependent protein kinase catalytic subunit, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5M1E1_PERM5)

HSP 1 Score: 202 bits (514), Expect = 1.920e-54
Identity = 111/272 (40.81%), Postives = 163/272 (59.93%), Query Frame = 2 
Query: 1184 PDQVKVMTKAPTIEIKAAIVVQAEIDTLARMQHPFIVHLFAVHQDDARCMLVLEYAAGGELLHRIRKRLRLPDGEAKFYAAEIADALQYMHNEAGIIYHDLKPENILLAADGHVKVVDFGLALDAEAKQWDECRMGTSMYMAPELANHRVQGAHAPAVDWWSFGCVVYEMLSGTLPFGDSADLSKYEIYTNITEKRLRFGKVFRSRSRGLLKRLLDKNPETRMSW--DGV---KEHKWFRNVDWVALHNRRIFPPWIPPTMKPGCTECFLRW 1984
            P  +K++ K+  + ++    V+AE   L  + HPFIV+LFA  +DD R  +++EY  GGEL   +RK  RLP+ +A+FYAAEI  A QYMH+   ++Y DLKPEN+L+  +GH+K+ DFG A     + W  C  GT  Y+APE+   +    H  AVDWW+ G +++EM++G  PF D    + + IY  +   R+ F K F S+++ L+KRLL ++   R     DGV   K+HKWF+++DW A  NR I  P+IP    P  T  F R+
Sbjct:   33 PFALKILKKSEIVRLRQVEHVRAERAILENLSHPFIVNLFATFRDDKRLFMLMEYVNGGELFSHLRKEGRLPNEDARFYAAEIVLAFQYMHS-LNVVYRDLKPENLLIDFEGHIKITDFGFAKVVTDRTWTLC--GTPEYLAPEIIQSK---GHGQAVDWWALGILIFEMIAGYPPFYDE---NPFGIYQKVLVGRIDFPKHFDSKAKDLVKRLLVRDRVKRYGSLRDGVEDIKQHKWFKSIDWEAAINREIPAPFIPQVRGPDDTSMFDRY 295
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1923.1 vs. uniprot
Match: A0A7J6LSC0_PERCH (Uncharacterized protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6LSC0_PERCH)

HSP 1 Score: 204 bits (518), Expect = 1.120e-53
Identity = 111/269 (41.26%), Postives = 159/269 (59.11%), Query Frame = 2 
Query: 1184 PDQVKVMTKAPTIEIKAAIVVQAEIDTLARMQHPFIVHLFAVHQDDARCMLVLEYAAGGELLHRIRKRLRLPDGEAKFYAAEIADALQYMHNEAGIIYHDLKPENILLAADGHVKVVDFGLALDAEAKQWDECRMGTSMYMAPELANHRVQGAHAPAVDWWSFGCVVYEMLSGTLPFGDSADLSKYEIYTNITEKRLRFGKVFRSRSRGLLKRLLDKNPETRMSW--DGV---KEHKWFRNVDWVALHNRRIFPPWIPPTMKPGCTECF 1975
            P  +K++ K+  I +K    V+AE   L ++ HPFIV+LFA  QD+ R  +++EY  GGEL   +RK  RLP+ +AKFYAAEI  A +YMH+   ++Y DLKPEN+L+  +GH+K+ DFG A     + W  C  GT  Y+APE+   +    H  AVDWW+ G +++EML+G  PF D    + + IY  +   R+ F K F +++R L+K LL ++   R     DGV   K HKWF+ +DW A  NR +  P+IP    P  T  F
Sbjct:  128 PFALKILKKSEVIRLKQIEHVRAERQILEKLSHPFIVNLFATFQDEKRLFMLMEYVNGGELFSHLRKEGRLPNDDAKFYAAEIVLAFEYMHS-LDVVYRDLKPENLLIDFEGHIKITDFGFAKVVTDRTWTLC--GTPEYLAPEIIQSK---GHGKAVDWWALGILIFEMLAGYPPFYDE---NPFGIYQKVLLGRIDFPKHFDTKARDLVKHLLTRDRTKRYGCLKDGVEDIKRHKWFKGIDWTAAANRELPAPFIPQVRGPDDTSMF 387
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1923.1 vs. uniprot
Match: A0A139A5I3_GONPJ (Camp-dependent protein kinase catalytic subunit n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A5I3_GONPJ)

HSP 1 Score: 200 bits (508), Expect = 6.660e-53
Identity = 112/277 (40.43%), Postives = 160/277 (57.76%), Query Frame = 2 
Query: 1193 VKVMTKAPTIEIKAAIVVQAEIDTLARMQHPFIVHLFAVHQDDARCMLVLEYAAGGELLHRIRKRLRLPDGEAKFYAAEIADALQYMHNEAGIIYHDLKPENILLAADGHVKVVDFGLALDAEAKQWDECRMGTSMYMAPELANHRVQGAHAPAVDWWSFGCVVYEMLSGTLPFGDSADLSKYEIYTNITEKRLRFGKVFRSRSRGLLKRLLDKNPETRMS-----WDGVKEHKWFRNVDWVALHNRRIFPPWIPPTMKPGCTECFLR------WKP 1990
            +KV+ KA  + +K    + +E D L+++ HPFIV+LF   QD+    ++LEY  GGEL   +R+  R  +   KFYAAEI  A+++MH    IIY DLKPEN+LL + GHVK+ DFG A   + + W  C  GT  Y+APE+   +    H  AVDWW+ G ++YEML+G  PF D    + + IY  I   ++ F   F   ++ L+KRLL  +   R+       + VK+HKWF+NV+WVAL +++I  P IP    PG T  F R      W+P
Sbjct:  110 MKVLKKAEVVRLKQVEHINSEKDILSQLNHPFIVNLFCTFQDEKCVYMLLEYVCGGELFSHLRRAGRFSNDMTKFYAAEIVSAIEFMHAR-NIIYRDLKPENLLLDSKGHVKIADFGFAKKVDDRTWTLC--GTPEYLAPEIIQSK---GHGKAVDWWALGILIYEMLAGYPPFYDE---NPFGIYEKILAGKIAFPSNFDVNAKDLIKRLLTADRTKRLGNLKGGAEDVKQHKWFKNVNWVALVHKQIRAPIIPTIRHPGDTSNFGRMRRCNIWRP 377
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1923.1 vs. uniprot
Match: C5L7G3_PERM5 (cAMP-dependent protein kinase catalytic subunit, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L7G3_PERM5)

HSP 1 Score: 199 bits (507), Expect = 1.520e-52
Identity = 110/272 (40.44%), Postives = 161/272 (59.19%), Query Frame = 2 
Query: 1184 PDQVKVMTKAPTIEIKAAIVVQAEIDTLARMQHPFIVHLFAVHQDDARCMLVLEYAAGGELLHRIRKRLRLPDGEAKFYAAEIADALQYMHNEAGIIYHDLKPENILLAADGHVKVVDFGLALDAEAKQWDECRMGTSMYMAPELANHRVQGAHAPAVDWWSFGCVVYEMLSGTLPFGDSADLSKYEIYTNITEKRLRFGKVFRSRSRGLLKRLLDKNPETRMSW--DGV---KEHKWFRNVDWVALHNRRIFPPWIPPTMKPGCTECFLRW 1984
            P  +K++ K+  + ++    V+AE   L  + HPFIV+LFA  +DD R  +++EY  GGEL   +RK  RLP+ +A+FYAAEI  A QYMH+   ++Y DLKPEN+L+  +GH+K+ DFG A     + W  C  GT  Y+APE+   +    H  AVDWW+ G +++EM++G  PF D    + + IY  +   R+ F K F S+++ L+K LL ++   R     DGV   K HKWF+++DW A  NR I  P+IP    P  T  F R+
Sbjct:  114 PFALKILKKSEIVRLRQVEHVRAERAILENLSHPFIVNLFATFRDDKRLFMLMEYVNGGELFSHLRKEGRLPNEDARFYAAEIVLAFQYMHS-LNVVYRDLKPENLLIDFEGHIKITDFGFAKVVTDRTWTLC--GTPEYLAPEIIQSK---GHGQAVDWWALGILIFEMIAGYPPFYDE---NPFGIYQKVLVGRIDFPKHFDSKAKDLVKHLLVRDRVKRYGSLRDGVEDIKRHKWFKSIDWEAAINREIPAPFIPQVRGPDDTSMFDRY 376
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1923.1 vs. uniprot
Match: A0A197JM78_9FUNG (Kinase-like protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JM78_9FUNG)

HSP 1 Score: 189 bits (479), Expect = 7.690e-50
Identity = 103/266 (38.72%), Postives = 153/266 (57.52%), Query Frame = 2 
Query: 1193 VKVMTKAPTIEIKAAIVVQAEIDTLARMQHPFIVHLFAVHQDDARCMLVLEYAAGGELLHRIRKRLRLPDGEAKFYAAEIADALQYMHNEAGIIYHDLKPENILLAADGHVKVVDFGLALDAEAKQWDECRMGTSMYMAPELANHRVQGAHAPAVDWWSFGCVVYEMLSGTLPFGDSADLSKYEIYTNITEKRLRFGKVFRSRSRGLLKRLLDKNPETRMS-----WDGVKEHKWFRNVDWVALHNRRIFPPWIPPTMKPGCTECF 1975
            +KV+ K+  + +K    + +E   LA++ +PFIV+LF   QDD    ++LEY  GGEL   +RK  +  +   +FYAAEI  A++Y+H++  IIY DLKPEN+LL + GHVK+ DFG A     + W  C  GT  Y+APE+   +    H  AVDWW+ G +++EML+G  PF D    + + IY  I   R+ F       ++ L+K+LL  +   R+       D +K HKWFR VDW  L ++ +  P +PP++ PG T  F
Sbjct:   26 MKVLKKSEVVRLKQVEHINSEKQILAQVHYPFIVNLFTTFQDDRHLYMLLEYVIGGELFSHLRKAGQFTNDMTRFYAAEIVLAIEYLHSK-DIIYRDLKPENLLLDSAGHVKITDFGFAKHVVDRTWTLC--GTPEYLAPEIIQSK---GHGKAVDWWALGILIFEMLAGYPPFFDD---NPFGIYEKILAGRIYFPPHIDPTAKDLIKKLLTADRTKRLGNLKGGSDDIKNHKWFRGVDWQGLLDKTVGAPIVPPSIHPGDTSNF 282
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1923.1 vs. uniprot
Match: A0A1Y1YYZ7_9FUNG (Camp-dependent protein kinase 9 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YYZ7_9FUNG)

HSP 1 Score: 190 bits (482), Expect = 1.040e-49
Identity = 106/281 (37.72%), Postives = 156/281 (55.52%), Query Frame = 2 
Query: 1166 HNDNDGPDQVKVMTKAPTIEIKAAIVVQAEIDTLARMQHPFIVHLFAVHQDDARCMLVLEYAAGGELLHRIRKRLRLPDGEAKFYAAEIADALQYMHNEAGIIYHDLKPENILLAADGHVKVVDFGLALDAEAKQWDECRMGTSMYMAPELANHRVQGAHAPAVDWWSFGCVVYEMLSGTLPFGDSADLSKYEIYTNITEKRLRFGKVFRSRSRGLLKRLLDKNPETRM-----SWDGVKEHKWFRNVDWVALHNRRIFPPWIPPTMKPGCTECFLRWKPE 1993
            H   D    +KV+ K   + +K    + +E   L  +  PF+V+LF   QDD    ++LEY  GGE+   +R+  R  +   +FYAAEI  A++Y+H++  IIY DLKPEN+LL   GH+K+ DFG A   E + W  C  GT  Y+APE+   +    H  AVDWW+ G +++EML+G  PF D    + + IY  I + R+ F   F   +R L+K+LL  +   R+     + + VK HKWFR +DW  +H+R+I  P +P    PG T  F R+  E
Sbjct:   63 HKGTDNYYAMKVLKKEVVVRLKQVEHINSEKQILTLIDFPFVVNLFCAFQDDHNLYMLLEYVIGGEVFSHLRRAGRFTNDMTRFYAAEIVLAIEYLHSK-DIIYRDLKPENLLLNERGHIKITDFGFAKIVEDRTWTLC--GTPEYLAPEIIQSK---GHGKAVDWWALGILIFEMLAGYPPFFDD---NPFGIYEKILDGRIMFPSHFDPAARDLIKKLLTNDRTKRLGNLKGASEDVKNHKWFRGIDWQTVHDRKIPAPIVPLFRHPGDTSNFDRYPEE 334
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1923.1 vs. uniprot
Match: U6GSW2_EIMAC (AGC kinase, putative n=1 Tax=Eimeria acervulina TaxID=5801 RepID=U6GSW2_EIMAC)

HSP 1 Score: 190 bits (482), Expect = 2.100e-49
Identity = 109/269 (40.52%), Postives = 152/269 (56.51%), Query Frame = 2 
Query: 1184 PDQVKVMTKAPTIEIKAAIVVQAEIDTLARMQHPFIVHLFAVHQDDARCMLVLEYAAGGELLHRIRKRLRLPDGEAKFYAAEIADALQYMHNEAGIIYHDLKPENILLAADGHVKVVDFGLALDAEAKQWDECRMGTSMYMAPELANHRVQGAHAPAVDWWSFGCVVYEMLSGTLPFGDSADLSKYEIYTNITEKRLRFGKVFRSRSRGLLKRLLDKNPETRMSW--DG---VKEHKWFRNVDWVALHNRRIFPPWIPPTMKPGCTECF 1975
            P  +K+++K   I +K    V+ E   LA++ HPFIV+L A  QD+ R  L++EY  GGEL   +RK++ +P  +A+ YAAEI  A QY+H E  I+Y DLKPEN+L+ A GH+K+ DFG A     + W  C  GT  Y+APE    R    H   VDWW+ G +++EML+G  PF D   L    IY  I   ++ F  +F   ++ L+KRLL   P  R     DG   VK HK+FR +DW   + R+I PP+ P    P  +  F
Sbjct:   94 PMALKILSKQKVITMKQVEHVKDERRILAQLSHPFIVNLLASFQDEKRLFLLMEYVNGGELFSYLRKQISVPVEQARLYAAEITLAFQYLH-ERSIVYRDLKPENLLIDAQGHIKITDFGFAKVVVGRTWTLC--GTHEYLAPESITRR---GHGLQVDWWALGILLFEMLAGRPPFVDDTPLG---IYKKIIAGKIEFPALFDCSAKSLIKRLLIHEPNKRYGCLKDGAEDVKNHKFFRGIDWELCYQRKIRPPYKPNIQGPRDSSMF 353
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1923.1 vs. uniprot
Match: A0A7R9UVA8_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UVA8_DIALT)

HSP 1 Score: 188 bits (478), Expect = 3.220e-49
Identity = 102/264 (38.64%), Postives = 152/264 (57.58%), Query Frame = 2 
Query: 1166 HNDNDGPDQVKVMTKAPTIEIKAAIVVQAEIDTLARMQHPFIVHLFAVHQDDARCMLVLEYAAGGELLHRIRKRLRLPDGEAKFYAAEIADALQYMHNEAGIIYHDLKPENILLAADGHVKVVDFGLALDAEAKQWDECRMGTSMYMAPELANHRVQGAHAPAVDWWSFGCVVYEMLSGTLPFGDSADLSKYEIYTNITEKRLRFGKVFRSRSRGLLKRLLDKNPETRMS-----WDGVKEHKWFRNVDWVALHNRRIFPPWIP 1942
            H D      +K+M K+  + +K    +++E + L  +QHPFI+ L+ V QD+    +VLEY  GGEL   +RK  +  + + +FYAA+I  A+Q +H ++ I+Y DLKPEN+LL  DG++K+ DFG A   E + W  C  GT  Y+APE+   R    H  AVDWW+ G ++YEML+G  PF D   L    IY  I E +++F   F   S+ ++KRLL  +   R+       D +K+HKWF  +DW  LH + +  P +P
Sbjct:   58 HTDTGRYQALKIMKKSEVVRLKQVDHIKSEKEILTAVQHPFIITLYGVFQDERNLYMVLEYVPGGELFTHLRKAGKFTNDQTRFYAAQIVMAVQALHADS-IVYRDLKPENLLLDEDGYLKITDFGFAKYVEDRTWTLC--GTPEYLAPEIIQSR---GHGKAVDWWALGILIYEMLAGYPPFYDEDPLG---IYQKILEGKIKFPWHFDRHSKDVIKRLLTADLTKRIGNLKGGADDIKKHKWFVGLDWEQLHAKELSAPILP 312
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1224.1923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVP5_ECTSI5.230e-16265.08Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KU84_9PHAE1.040e-12178.33Protein kinase domain-containing protein n=1 Tax=E... [more]
C5M1E1_PERM51.920e-5440.81cAMP-dependent protein kinase catalytic subunit, p... [more]
A0A7J6LSC0_PERCH1.120e-5341.26Uncharacterized protein n=1 Tax=Perkinsus chesapea... [more]
A0A139A5I3_GONPJ6.660e-5340.43Camp-dependent protein kinase catalytic subunit n=... [more]
C5L7G3_PERM51.520e-5240.44cAMP-dependent protein kinase catalytic subunit, p... [more]
A0A197JM78_9FUNG7.690e-5038.72Kinase-like protein n=1 Tax=Linnemannia elongata A... [more]
A0A1Y1YYZ7_9FUNG1.040e-4937.72Camp-dependent protein kinase 9 n=1 Tax=Basidiobol... [more]
U6GSW2_EIMAC2.100e-4940.52AGC kinase, putative n=1 Tax=Eimeria acervulina Ta... [more]
A0A7R9UVA8_DIALT3.220e-4938.64Hypothetical protein n=1 Tax=Diacronema lutheri Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1224contigH-canaliculatus_F_contig1224:5406..12439 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score495.0
Seed ortholog evalue4.2e-137
Seed eggNOG ortholog2880.D7FVP5
KEGG koko:K04345
KEGG Pathwayko01522,ko04010,ko04014,ko04020,ko04024,ko04062,ko04113,ko04114,ko04138,ko04140,ko04211,ko04213,ko04261,ko04270,ko04310,ko04340,ko04341,ko04371,ko04530,ko04540,ko04611,ko04713,ko04714,ko04720,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04740,ko04742,ko04750,ko04910,ko04911,ko04912,ko04913,ko04914,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04923,ko04924,ko04925,ko04926,ko04927,ko04934,ko04961,ko04962,ko04970,ko04971,ko04976,ko05012,ko05020,ko05030,ko05031,ko05032,ko05110,ko05146,ko05165,ko05166,ko05169,ko05200,ko05203,ko05205,ko05414,map01522,map04010,map04014,map04020,map04024,map04062,map04113,map04114,map04138,map04140,map04211,map04213,map04261,map04270,map04310,map04340,map04341,map04371,map04530,map04540,map04611,map04713,map04714,map04720,map04723,map04724,map04725,map04726,map04727,map04728,map04740,map04742,map04750,map04910,map04911,map04912,map04913,map04914,map04915,map04916,map04918,map04919,map04921,map04922,map04923,map04924,map04925,map04926,map04927,map04934,map04961,map04962,map04970,map04971,map04976,map05012,map05020,map05030,map05031,map05032,map05110,map05146,map05165,map05166,map05169,map05200,map05203,map05205,map05414
KEGG ModuleM00695
EggNOG free text desc.cAMP-dependent protein kinase activity
EggNOG OGsKOG0616@1,KOG0616@2759
EC2.7.11.11
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-01_005980.1
Exons9
Model size3070
Cds size1509
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928940.335575-UTR-H-canaliculatus_F_contig1224:5405..66061622928940.335575-UTR-H-canaliculatus_F_contig1224:5405..6606Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1224 5406..6606 +
1696845620.5114462-UTR-H-canaliculatus_F_contig1224:5405..66061696845620.5114462-UTR-H-canaliculatus_F_contig1224:5405..6606Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1224 5406..6606 +
1622928940.4492595-UTR-H-canaliculatus_F_contig1224:12079..124391622928940.4492595-UTR-H-canaliculatus_F_contig1224:12079..12439Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1224 12080..12439 +
1696845620.635273-UTR-H-canaliculatus_F_contig1224:12079..124391696845620.635273-UTR-H-canaliculatus_F_contig1224:12079..12439Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1224 12080..12439 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928940.3486962-CDS-H-canaliculatus_F_contig1224:6606..67201622928940.3486962-CDS-H-canaliculatus_F_contig1224:6606..6720Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 6607..6720 +
1696845620.52898-CDS-H-canaliculatus_F_contig1224:6606..67201696845620.52898-CDS-H-canaliculatus_F_contig1224:6606..6720Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 6607..6720 +
1622928940.3578935-CDS-H-canaliculatus_F_contig1224:7350..74971622928940.3578935-CDS-H-canaliculatus_F_contig1224:7350..7497Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 7351..7497 +
1696845620.5393713-CDS-H-canaliculatus_F_contig1224:7350..74971696845620.5393713-CDS-H-canaliculatus_F_contig1224:7350..7497Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 7351..7497 +
1622928940.3680413-CDS-H-canaliculatus_F_contig1224:8300..84741622928940.3680413-CDS-H-canaliculatus_F_contig1224:8300..8474Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 8301..8474 +
1696845620.5493312-CDS-H-canaliculatus_F_contig1224:8300..84741696845620.5493312-CDS-H-canaliculatus_F_contig1224:8300..8474Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 8301..8474 +
1622928940.3807838-CDS-H-canaliculatus_F_contig1224:9116..93501622928940.3807838-CDS-H-canaliculatus_F_contig1224:9116..9350Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 9117..9350 +
1696845620.5590973-CDS-H-canaliculatus_F_contig1224:9116..93501696845620.5590973-CDS-H-canaliculatus_F_contig1224:9116..9350Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 9117..9350 +
1622928940.3911824-CDS-H-canaliculatus_F_contig1224:10115..104431622928940.3911824-CDS-H-canaliculatus_F_contig1224:10115..10443Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 10116..10443 +
1696845620.5688279-CDS-H-canaliculatus_F_contig1224:10115..104431696845620.5688279-CDS-H-canaliculatus_F_contig1224:10115..10443Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 10116..10443 +
1622928940.4014535-CDS-H-canaliculatus_F_contig1224:10857..109421622928940.4014535-CDS-H-canaliculatus_F_contig1224:10857..10942Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 10858..10942 +
1696845620.5787816-CDS-H-canaliculatus_F_contig1224:10857..109421696845620.5787816-CDS-H-canaliculatus_F_contig1224:10857..10942Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 10858..10942 +
1622928940.4119008-CDS-H-canaliculatus_F_contig1224:11178..113051622928940.4119008-CDS-H-canaliculatus_F_contig1224:11178..11305Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 11179..11305 +
1696845620.5979614-CDS-H-canaliculatus_F_contig1224:11178..113051696845620.5979614-CDS-H-canaliculatus_F_contig1224:11178..11305Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 11179..11305 +
1622928940.4255433-CDS-H-canaliculatus_F_contig1224:11363..114621622928940.4255433-CDS-H-canaliculatus_F_contig1224:11363..11462Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 11364..11462 +
1696845620.6069913-CDS-H-canaliculatus_F_contig1224:11363..114621696845620.6069913-CDS-H-canaliculatus_F_contig1224:11363..11462Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 11364..11462 +
1622928940.4368653-CDS-H-canaliculatus_F_contig1224:11878..120791622928940.4368653-CDS-H-canaliculatus_F_contig1224:11878..12079Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 11879..12079 +
1696845620.6215565-CDS-H-canaliculatus_F_contig1224:11878..120791696845620.6215565-CDS-H-canaliculatus_F_contig1224:11878..12079Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 11879..12079 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1224.1923.1prot_H-canaliculatus_F_contig1224.1923.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1224 6607..12079 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1224.1923.1

>prot_H-canaliculatus_F_contig1224.1923.1 ID=prot_H-canaliculatus_F_contig1224.1923.1|Name=mRNA_H-canaliculatus_F_contig1224.1923.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=503bp
MTKAPTIEIKAAIVVQAEIDTLARMQHPFIVHLFAVHQDDARCMLVLEYA
AGGELLHRIRKRLRLPDGEAKFYAAEIADALQYMHNEAGIIYHDLKPENI
LLAADGHVKVVDFGLALDAEAKQWDECRMGTSMYMAPELANHRVQGAHAP
AVDWWSFGCVVYEMLSGTLPFGDSADLSKYEIYTNITEKRLRFGKVFRSR
SRGLLKRLLDKNPETRMSWDGVKEHKWFRNVDWVALHNRRIFPPWIPPTM
KPGCTECFLRWKPEPPPGAGAGARARARTAGGCGGGGDKQHPIHHPSLSD
QVLQHECYYTRIKIPPGCTLRPPPPPPQSPAPGQTRRDGSREMNGASSNF
QRAAIEPAVRRSSLKNNARAPLATGRHSASLLDHSAAVSSNKRSSDDGEG
GEGGMEEEGVDVAAPPRRTPSGPRAAGMRRGASSPQLRAWLPATVASPQH
PAAVEAKGTIGSRRTMPLFLVPAIGEPVRAEAVAVVARRIRATRLCPSRA
LP*
back to top

mRNA from alignment at H-canaliculatus_F_contig1224:5406..12439+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1224.1923.1 ID=mRNA_H-canaliculatus_F_contig1224.1923.1|Name=mRNA_H-canaliculatus_F_contig1224.1923.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7034bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1224:5406..12439+ (Hapterophycus canaliculatus Oshoro5f female)
GGGTATGTGGGGGGTTGACCTTCGGGATGGGAACGGGGTCTTCCTACCAA
ATGGTGGTCGATCAGAGCAACAGGCGGACGAACGATAAGTGAGACGGCCA
GCTTCCATGCCTCTCCGCGAAGTAGCGGAAGTTGTGTAGCGGTTCACCGT
TTGGGGTGTGACGTCAAACTAGCCGTCGCGAGTTCCTCTCGTGGGCGTTT
AATGCATGATCGGTTGAACGCGTTTTTGCTCCTCGAGCTCTATAGACTAG
AAGAACTTTCCCTTGGTCAGATATAGACTGTGTAGCTTTTTTTCCGCCAC
CAAATGCCAGGATGTGAAAGTGCCAAAATGCGTTGTCGCGGATGTACTGT
ACTGGAGCTCCTAAACTTGATTTATTCCTTGCACGGCAACCCCACCCCCT
TATGACTGTGTTCACGTCGCCTTATTCCCGCCAATGAGAGGTAGTACTGC
ACTGAAATGGTTACACCATTTTCACAAGTATCTTTGGAGAAAATATTTGA
ACGACAAGAAAAATCTCCCGTACGAGTATGCCCTCTGTGGGTGTTTAATT
CTACTCTATTGATTGGTTGGCTCGCAGCGACCTCGACTGGATCGCGAAGC
CTCCGAAAAAAGGGGAAGCACGCGTTCCTCCCCTGTTCGAGAAGGATCTG
ATTGCCGGGGACGGGCCGATCCTGGGAAAGGGCGCTTACGGCGTGACGCG
CTTGTCGAAGAGCTCGTTCACGGGAGAGTATTACGCGGTAGGAGAGCGAA
AGGGGGTGCCGCAAAGATACGGAGAAAGAAGGAGACACAAAATGTAGAGC
GGGGGCTAGGGGCGAACAGCGGTGGAAGAAGGGGTAAAGAGAGGGAAAGG
GAGGAGGGTGGGAAACAAAAAGTGCATCATGCTGAAAACGAGGAGCATCG
TACATCTCTCGAAAACCTATATCTAACCGCAATGTTTTGAAGGTGATGTG
CCACAAAACCACAAGTATAACAAGGCATATACTCCGAGTACTATTTTGCG
AATAGAAAAGGTCCCCCTTCCGTCATCGTTGAAAAAGATCACACCGCCGC
GAGTAGAATGGTATGCTGCAACACATATCGTTGTTGGACCTTTTCCTCGC
TTGGTATCCCGACACCTGGTGGTGCGGGTATATCAAAATGATACCAACAC
GATGGCGACGATGGCCACAACGACAACGATGGCCCTGACCAGGTCAAGGT
GATGACCAAGGCTCCCACTATCGAGATAAAAGCTGCCATTGTCGTCCAGG
CAGAGATCGACACGCTCGCGCGGATGCAGCACCCTTTTATTGTACACCTG
TTCGCGGTACATCAGGTGGGTTAATGGATCACACGCGGTCATAAGTTTTA
TGCTTCTGCATTATCACTCGACTACATATATTGGCCCGCTAGCACAAAGG
GATGTGACTTTCAGGTGCTGGATCAGCGCAGATAGATACGACAACATGAA
TTCATCAGTTTGGGGTATCAAACTCACCTTTTCTCGGAGTATTATCCGCT
TTTTATGTCAATTTTATCGATGTTGTTGTTTGTCTTGGTGTCGACCTTTT
CATGAGAGCAGTAACAATCGTCTACACGGTACACTGCATAAACTTTGTCT
TCATTTGTGTGCCTCAGGTCGACCCCTCCAAAAAGCAAATGCCGAGGCAT
TTGCGGCTTTAGAAGGAAGCAGCAACAAAAAATACGTCGCCACCGCGTTG
GAGCGCCACCCAAACTGCGGTTCGAGCTGCGAAGAGCTAGGAAGAGCGAA
AAACAATTTCCACAAACGCCGAAGAAACAGTGCGCAAACGCTTGACGAGC
AAGGGAGAGAGTAGCAATCACGCGCAGACGCTCAGCCACACACCACAGTA
GTGACGATAAGCGCCCCGAGGTGACGTCTCTGCGTACCCTTCTCAACTGC
CGAGTTTCTTGTCTTTGGTGATCTTTTTGCCACTCTATTTTGTAGGACGA
TGCACGCTGCATGTTGGTTCTGGAGTATGCGGCGGGCGGAGAGCTCCTGC
ACAGAATCCGGAAGAGGCTGCGCCTCCCGGACGGGGAAGCCAAGTTTTAC
GCCGCGGAAATAGCAGACGCGCTACAATACATGCACAACGAGGTGTGCGA
GCGTGTATCTGTATGTTTGATTTGTGTTTCCTTTTTCCTTTTTCTTATGT
TGTTGGCCGCGCCACAACGGGTGATCAGCGTTGGGTTTCACTAGGTCTCG
TCGGAAAAGCAAGAGGTTTGCCTTGAATGCGCGAGATCTCTATTCGTTGG
AGTCTAGCCGAAGGTCCCGCCGGTAGCATTTTTGTGTCTGCATTGCCCTG
AGTACGAGAAGCTACACAAGCAACCTCCCTTTCTTCATTTTATGATCAAC
CTACGCAAGGAAGTCCTTGTGTGTGGACGAAGGTGCAAACGACAGAGATC
CTCGTATCCATCAACTTTGCAAATGTGTACGCAAAACTTTCGTGGAGAGA
CAAATGTTGGGTGGCTTCCGGTCAAGGAGGAGTACAAAATCATGTTTGTT
TGTGTGCTATGACGACCAGAATCGTAGACGGGGAGGCGTTGGCACTACGA
TAGCTGGTCCCGAAGGATTCACCTACCTCCAGAGAGTATGCCAAACGCAC
ATCGTCGATAAGTAGAAGAAGACTGTGCTCGAGCTGAAGAGACGTGACGA
AACTGGTGTTATTTTCCGGATATTACTATTTCTGTGCCCTCGGTCAAGTT
GAACGAGGAAGGCAAAGCATAGAGGAACGGACTTACAGGGCTGCGCTAGG
TCGGTACAGTCGAGGCCAGCTGAACATCTTCATGTGAAGACACTGATGCA
GGCTACGTGTTTCTGTTTCTTTTTCGACGCCCTCCGCCCTACTTTGCCCT
GCTCGACGTGTCCCGCCTCAAATCCGCAAAACTAAACTGAGAAAGGCGGG
CATCATCTATCACGACTTGAAACCGGAAAATATTTTGCTTGCAGCGGATG
GGCACGTCAAAGTCGTCGATTTCGGCCTCGCCCTCGACGCCGAGGCGAAA
CAGTGGGACGAGTGCCGGATGGGGACCTCCATGTACATGGCGCCCGAGCT
GGCCAACCACAGGGTTCAGGTGCTGTGGTTGTTCATTTGAATAGTTGTTG
TTGGATCGCTTGCTCCCTTGTATGTTGGGTGCCTCGTTTGTTGTTCGCAG
GAGCGCTTGTTTCCTCAAATGCGTGTCGGTTGTGCTCCTGTTTGCGTTTC
TGTAGCATTTGCTTGTACGCGCCCGCTGTAGACGAGAAAGGCCTGCGCCT
GCGCCGACCGTGGCCTGACCGATTGTCATCACGGTCGGCCGCACTCTGTA
GGCGCGGGAGCAGACCACGCCCGAAGCGCGAACCCTCCGTTGAAATTCCT
CCGCACACCCCGCTCGCCTTTCCTCCTTCCTTCTCTGGACCAGGCATCTA
TGAAAATTGTTTGGCGCCTCCGTTTCTGTAACGTTCAACGTTTGTGTACA
AGGGGGTCTACGAGGAGTCTAATATAAGGCTATCATACTATGTGGTGCCG
AATGATGCCTTGGTTACATTGTCATGTCAGAAAAGAGACTCATGCCAATC
GCATATCCTAAGCTAATCACTACACAAAACTCCATCTGCCAAGTCCTCGG
AGTCGAAATCGCGCCACGCAAAACACTTCATCGCGCAAACTCAGCACACC
CGTATGGCACCCACACAACCAACAAAACCAACACACACAACACACGCGCG
CGCGCCTCCAGGGAGCACACGCGCCGGCAGTGGACTGGTGGTCCTTCGGG
TGCGTGGTATACGAAATGCTGTCCGGCACACTCCCGTTCGGAGACTCGGC
CGATCTGAGCAAGTACGAGATCTACACCAACATCACGGAGAAGCGCCTAC
GGTTCGGGAAGGTCTTCCGGTCGAGGTCAAGAGGGCTGCTGAAGCGGCTC
CTGGATAAGAATCCGGAGACGAGAATGAGTTGGGACGGGGTCAAGGTAAT
TCGAAGCACGCCAAGAAAGATCTAAATCATTGGGTGTTGATGAGTAGGAG
ATGCGCTCGGCGAGGAATTGTCTAGCGAAATTCGTGGCTAAATGTAGGGT
CCAGGGGGCTGCATGTACATGTAGGCAGGATCATATATTTCTGACTGCTG
CACATGCCCTCGTAGATCTCTTTGGTTGTTTACCTGATTTTGGATACGCC
TGCGTATGACCGCATTATTCGGCTGGTCTATAAATCCTCGTGCTGAGGCA
CTTCTCACCGTCAACCAAAAAATGAGGGCCGCGACTTCAACGCGTGCCGT
TGTCGCCAGCCCTGTGTAGCTTTTGTATTTCCTGCATAAGCCACGCTCTC
GGATGTGGCGTGTTCCTCAGCGTTCGCACGTTGCATCTCCCTCAGCGTTT
TTCGGATGAAGGTTTAGCCGCAAGACTCCTGACGGGTCCATTGACAGGGG
GGGGGGATATCAGTAAGCCCATTTGAGACTGCAGAAAGTGGTGCGAGCAA
GGTCCTTTTTTTATGTACACACATCGCTGCAAGGTCGATGGCAGGTGGCC
CACTCTTTCGTTTCATCTCTGCAATTGTGCTGCAGCATGCAGGCCTTGAC
CCCGGTTCGGAAGCCAAGGGATTGATTCGATGTTGATCTTGATCTTAATT
TGTTCTGGCTTGTTCTCTTCTGGTCTGTTCTGATCTGATGTGCTGCTGGT
GACGCTGTTGCTGTTGATGCCTCTGTTGTGCCGTCTTCGCCGTTCTTGTC
GCAACACAAGGAGCACAAGTGGTTCCGCAACGTGGACTGGGTGGCCCTGC
ACAACAGACGCATTTTCCCGCCATGGATCCCCCCCACGATGAAACCCGGC
TGTACAGAATGCTTCCTCCGGTGGAAACCCGAACCCCCTCCAGGGGCTGG
GGCTGGGGCTAGGGCTCGGGCTAGGACGGCCGGTGGCTGCGGTGGGGGGG
GGGACAAGCAACACCCTATCCATCACCCGTCCCTGTCCGATCAAGTGCTG
CAGCACGAGTGCTACTACACCCGAATAAAGATCCCACCAGGGTGCACCCT
TCGCCCACCGCCACCCCCTCCTCAGTCGCCGGCGCCCGGTGAGACGGAGG
CAGCGGACAAACGCAGCGCGCGGAGTACTTTTGAGAGTTGACAATCTTTC
TATTGTCGAGGGGGAAAAGTTGTCACGAAGCAAGAGCCAAGCCGCGGCAT
CGGTACAGAATAATCCTGCTCGGTTCTTGGCTGAGTGGTCGCCGGTAGCC
TGTAGCAGTCGTAGAAATGTCGATGGACAGATTGATACGGCGGGTCGTCG
TGGTTTCCCTGCCGGCCTGGCTTGTTGAGCGGGAGGTAGGTTGTACGCAG
GAGAGAGGCGGGACAAGCGAGATTAAAACACCGAGTTCGATTTGCTTGTG
AACCTTTCTTTGTCCGTGCTTTCGCGCGCCGTGTCCGAGTGCTGAATGCC
CTAAGGCTATTGCGCGTCTTCGCCCCATGCATAATGCGCACAATCACATC
AGGCCAAACGAGAAGGGACGGGAGCAGGGAGATGAACGGTGCGAGCAGTA
ACTTTCAACGGGCTGCGATAGAACCTGCGGTCAGGAGGTGAGAGCGAACA
AACGGATAATACCGCATGCCCCTTGTCTAACGGCCGCTGCTGCCATGTTT
GTGTGTACGGCGTTTTTTGTTTTTGTCGCAGTAAACATGCCGCTCGATCA
CAAATAACCCCGAGTGCCTCCTCCGTCCTGGGGCAAGACGGTACAAACTT
GAACCCTCAGTCGAATCTAAACGGCGCAAATCGCCCCTTCCCCTGCCCGA
CGTCGTCTTCTGCCGTTCCAAAGATCCTCTTTGAAGAACAACGCACGTGC
ACCCCTGGCTACGGGTAGGCATAGCGCCAGTTTATTGGATCACTCGGCCG
CGGTGTCCAGCAACAAACGGAGCAGCGACGACGGGGAAGGTGGGGAGGGG
GCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGCGGGAGGGGATGGAGGAGGAGGGCGTCGATGTCGCGGCGCCTCCTCGC
CGAACGCCGTCGGGTCCCCGGGCGGCGGGAATGCGAAGAGGCGCTTCAAG
TCCGCAGGTGAGAGGAAGGACCCGAGTTAAGGGATAAAGAATACCTCATA
TTCATCAGGGAGACGGAGGGAGGGAAGGAGAGAGAGATGGGGGCGGGGCT
GAACGGGGTGTTGGAAACGATGGTGAATGTTGATCTTCACAGAAAAACAC
GCTGTGACTCGTCTCCTCACTAGAAACAAAGGCAAACGACGGCACGGACA
AGCTCCTCCCTCGATCACTTCTCGACTTGTCTCCCGTATTGAACGCCACA
TCACAGCCTAAGCATGACGCGTTGTCGCGCAGATTACTGTTGACACGCCA
GTCACAGAGCAGAGAAAGTATCAACGCTCTCGTTTCTAGTCTTTGGGACC
CATCTAACTAGCCGACGTTGCGTGCCTCTCTGTTTTCCGCGGCGTTCTCG
TGTCCTGTTTTCTATCAATGCAGCTGCGCGCGTGGCTGCCGGCGACGGTC
GCTTCGCCGCAACATCCGGCGGCGGTGGAGGCAAAGGGAACCATAGGGTC
ACGTCGCACGATGCCACTGTTCCTCGTACCAGCCATCGGCGAGCCAGTCC
GGGCGGAAGCGGTGGCAGTGGTGGCGCGGAGAATCAGGGCAACGCGCCTC
TGTCCAAGCCGTGCCCTTCCGTAAAAAAGAAGCGCAGTGCTGTCGCCTAC
CGATGACAGGGTGCCCGTTTTCTCGGATGCTGGACGTACGCGCGCCCAGT
GTGTGTTCATGTTGCCACGCTGTTCGTCTGCGTGTGTGTGTGTGTGTGTG
TATGTTACTGCGGCGTTCCCTTCTCGTCACGATAAACCCTCTAGCGTGTG
TGTTGGTGAGAGGGCCGTGGGTCCCCGGCCGGTTTCGCGAGGGAAACATC
TTGGAACGGACAGGGTAAGACAGCGGATAGGATAAGACAGCGGCGAAGGG
GTACAACGCGATTGTGGACCACCATGCGCTGCGGTAAGGGGAGATCCGCC
GACTTGGAACACGCGAGATTTTACAGGATCGCCC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1224:5406..12439+

>mRNA_H-canaliculatus_F_contig1224.1923.1 ID=mRNA_H-canaliculatus_F_contig1224.1923.1|Name=mRNA_H-canaliculatus_F_contig1224.1923.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3018bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1224:5406..12439+ (Hapterophycus canaliculatus Oshoro5f female)
ATGACCAAGGCTCCCACTATCGAGATAAAAGCTGCCATTGTCGTCCAGGC
AGAGATCGACACGCTCGCGCGGATGCAGCACCCTTTTATTGTACACCTGT
TCGCGGTACATCAGATGACCAAGGCTCCCACTATCGAGATAAAAGCTGCC
ATTGTCGTCCAGGCAGAGATCGACACGCTCGCGCGGATGCAGCACCCTTT
TATTGTACACCTGTTCGCGGTACATCAGGACGATGCACGCTGCATGTTGG
TTCTGGAGTATGCGGCGGGCGGAGAGCTCCTGCACAGAATCCGGAAGAGG
CTGCGCCTCCCGGACGGGGAAGCCAAGTTTTACGCCGCGGAAATAGCAGA
CGCGCTACAATACATGCACAACGAGGACGATGCACGCTGCATGTTGGTTC
TGGAGTATGCGGCGGGCGGAGAGCTCCTGCACAGAATCCGGAAGAGGCTG
CGCCTCCCGGACGGGGAAGCCAAGTTTTACGCCGCGGAAATAGCAGACGC
GCTACAATACATGCACAACGAGGCGGGCATCATCTATCACGACTTGAAAC
CGGAAAATATTTTGCTTGCAGCGGATGGGCACGTCAAAGTCGTCGATTTC
GGCCTCGCCCTCGACGCCGAGGCGAAACAGTGGGACGAGTGCCGGATGGG
GACCTCCATGTACATGGCGCCCGAGCTGGCCAACCACAGGGTTCAGGCGG
GCATCATCTATCACGACTTGAAACCGGAAAATATTTTGCTTGCAGCGGAT
GGGCACGTCAAAGTCGTCGATTTCGGCCTCGCCCTCGACGCCGAGGCGAA
ACAGTGGGACGAGTGCCGGATGGGGACCTCCATGTACATGGCGCCCGAGC
TGGCCAACCACAGGGTTCAGGGAGCACACGCGCCGGCAGTGGACTGGTGG
TCCTTCGGGTGCGTGGTATACGAAATGCTGTCCGGCACACTCCCGTTCGG
AGACTCGGCCGATCTGAGCAAGTACGAGATCTACACCAACATCACGGAGA
AGCGCCTACGGTTCGGGAAGGTCTTCCGGTCGAGGTCAAGAGGGCTGCTG
AAGCGGCTCCTGGATAAGAATCCGGAGACGAGAATGAGTTGGGACGGGGT
CAAGGGAGCACACGCGCCGGCAGTGGACTGGTGGTCCTTCGGGTGCGTGG
TATACGAAATGCTGTCCGGCACACTCCCGTTCGGAGACTCGGCCGATCTG
AGCAAGTACGAGATCTACACCAACATCACGGAGAAGCGCCTACGGTTCGG
GAAGGTCTTCCGGTCGAGGTCAAGAGGGCTGCTGAAGCGGCTCCTGGATA
AGAATCCGGAGACGAGAATGAGTTGGGACGGGGTCAAGGAGCACAAGTGG
TTCCGCAACGTGGACTGGGTGGCCCTGCACAACAGACGCATTTTCCCGCC
ATGGATCCCCCCCACGATGAAACCCGGCTGTACAGAATGCTTCCTCCGGT
GGAAACCCGAACCCCCTCCAGGGGCTGGGGCTGGGGCTAGGGCTCGGGCT
AGGACGGCCGGTGGCTGCGGTGGGGGGGGGGACAAGCAACACCCTATCCA
TCACCCGTCCCTGTCCGATCAAGTGCTGCAGCACGAGTGCTACTACACCC
GAATAAAGATCCCACCAGGGTGCACCCTTCGCCCACCGCCACCCCCTCCT
CAGTCGCCGGCGCCCGGAGCACAAGTGGTTCCGCAACGTGGACTGGGTGG
CCCTGCACAACAGACGCATTTTCCCGCCATGGATCCCCCCCACGATGAAA
CCCGGCTGTACAGAATGCTTCCTCCGGTGGAAACCCGAACCCCCTCCAGG
GGCTGGGGCTGGGGCTAGGGCTCGGGCTAGGACGGCCGGTGGCTGCGGTG
GGGGGGGGGACAAGCAACACCCTATCCATCACCCGTCCCTGTCCGATCAA
GTGCTGCAGCACGAGTGCTACTACACCCGAATAAAGATCCCACCAGGGTG
CACCCTTCGCCCACCGCCACCCCCTCCTCAGTCGCCGGCGCCCGGCCAAA
CGAGAAGGGACGGGAGCAGGGAGATGAACGGTGCGAGCAGTAACTTTCAA
CGGGCTGCGATAGAACCTGCGGTCAGGAGGCCAAACGAGAAGGGACGGGA
GCAGGGAGATGAACGGTGCGAGCAGTAACTTTCAACGGGCTGCGATAGAA
CCTGCGGTCAGGAGATCCTCTTTGAAGAACAACGCACGTGCACCCCTGGC
TACGGGTAGGCATAGCGCCAGTTTATTGGATCACTCGGCCGCGGTGTCCA
GCAACAAACGGAGCAGCGACGACGGGGAAGGTGGGGAGGGGATCCTCTTT
GAAGAACAACGCACGTGCACCCCTGGCTACGGGTAGGCATAGCGCCAGTT
TATTGGATCACTCGGCCGCGGTGTCCAGCAACAAACGGAGCAGCGACGAC
GGGGAAGGTGGGGAGGGGGGGATGGAGGAGGAGGGCGTCGATGTCGCGGC
GCCTCCTCGCCGAACGCCGTCGGGTCCCCGGGCGGCGGGAATGCGAAGAG
GCGCTTCAAGTCCGCAGGGGATGGAGGAGGAGGGCGTCGATGTCGCGGCG
CCTCCTCGCCGAACGCCGTCGGGTCCCCGGGCGGCGGGAATGCGAAGAGG
CGCTTCAAGTCCGCAGCTGCGCGCGTGGCTGCCGGCGACGGTCGCTTCGC
CGCAACATCCGGCGGCGGTGGAGGCAAAGGGAACCATAGGGTCACGTCGC
ACGATGCCACTGTTCCTCGTACCAGCCATCGGCGAGCCAGTCCGGGCGGA
AGCGGTGGCAGTGGTGGCGCGGAGAATCAGGGCAACGCGCCTCTGTCCAA
GCCGTGCCCTTCCGTAACTGCGCGCGTGGCTGCCGGCGACGGTCGCTTCG
CCGCAACATCCGGCGGCGGTGGAGGCAAAGGGAACCATAGGGTCACGTCG
CACGATGCCACTGTTCCTCGTACCAGCCATCGGCGAGCCAGTCCGGGCGG
AAGCGGTGGCAGTGGTGGCGCGGAGAATCAGGGCAACGCGCCTCTGTCCA
AGCCGTGCCCTTCCGTAA
back to top