mRNA_H-canaliculatus_F_contig12190.1884.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12190.1884.1 vs. uniprot
Match: D7G0B6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B6_ECTSI) HSP 1 Score: 233 bits (595), Expect = 6.330e-66 Identity = 119/137 (86.86%), Postives = 126/137 (91.97%), Query Frame = 1
Query: 178 APRVSLAGAVSAEGSNLSVGQRQLMCMARALLRRAAVLVMDEATANVDPETDSLIQEAMKEGFGDCTILCIAHRLHTVAFYDRVLVLDQGKVAEYDTPLALLQNPYSQFRAMCEKTGDLEGLKRVARESARNSASKS 588
A + L AVSAEGSNLSVGQRQLMCMARALLRRAAVLVMDEATANVDPETD+LIQEAMKEGFGDCTILCIAHRLHTVAFYDRVLVLDQG+VAEYDTPLALLQ+PYSQFR MCEK GDLEGLKRVA+E+A S+ S
Sbjct: 1362 AQELKLQHAVSAEGSNLSVGQRQLMCMARALLRRAAVLVMDEATANVDPETDALIQEAMKEGFGDCTILCIAHRLHTVAFYDRVLVLDQGQVAEYDTPLALLQDPYSQFRGMCEKAGDLEGLKRVAQEAAAKSSGSS 1498
BLAST of mRNA_H-canaliculatus_F_contig12190.1884.1 vs. uniprot
Match: A0A835YUJ8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ8_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.510e-44 Identity = 84/123 (68.29%), Postives = 103/123 (83.74%), Query Frame = 1
Query: 193 LAGAVSAEGSNLSVGQRQLMCMARALLRRAAVLVMDEATANVDPETDSLIQEAMKEGFGDCTILCIAHRLHTVAFYDRVLVLDQGKVAEYDTPLALLQNPYSQFRAMCEKTGDLEGLKRVARE 561
L+ +S GSNLSVGQRQLMCMARALLRRAAVL++DEATAN+D ETD++IQE MKEGF DCTILCIAHRLHTV +YD++LVL+ G+VAEYDTP LL++ S+F +C ++GDL L R+A E
Sbjct: 1205 LSHEISDAGSNLSVGQRQLMCMARALLRRAAVLILDEATANIDRETDTIIQETMKEGFQDCTILCIAHRLHTVVYYDKILVLEAGRVAEYDTPRHLLKDKSSRFYGLCRQSGDLRTLIRMAEE 1327
BLAST of mRNA_H-canaliculatus_F_contig12190.1884.1 vs. uniprot
Match: A0A836CNA1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA1_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.710e-43 Identity = 82/115 (71.30%), Postives = 98/115 (85.22%), Query Frame = 1
Query: 217 GSNLSVGQRQLMCMARALLRRAAVLVMDEATANVDPETDSLIQEAMKEGFGDCTILCIAHRLHTVAFYDRVLVLDQGKVAEYDTPLALLQNPYSQFRAMCEKTGDLEGLKRVARE 561
GSNLS+GQRQLMCMARAL+RRA++LVMDEATA VDPETD LIQE M+ DCTILCIAHRLHT+ FYDR+LVL++G+VAEY PLALL++P+S FRA+CEK+G L L VA +
Sbjct: 590 GSNLSMGQRQLMCMARALVRRASILVMDEATAAVDPETDILIQEVMRSELRDCTILCIAHRLHTIIFYDRILVLERGRVAEYAPPLALLRDPHSLFRALCEKSGALAELLAVAED 704
BLAST of mRNA_H-canaliculatus_F_contig12190.1884.1 vs. uniprot
Match: A0A6H5K4L0_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4L0_9PHAE) HSP 1 Score: 161 bits (408), Expect = 6.190e-41 Identity = 78/118 (66.10%), Postives = 96/118 (81.36%), Query Frame = 1
Query: 205 VSAEGSNLSVGQRQLMCMARALLRRAAVLVMDEATANVDPETDSLIQEAMKEGFGDCTILCIAHRLHTVAFYDRVLVLDQGKVAEYDTPLALLQNPYSQFRAMCEKTGDLEGLKRVAR 558
V G N SVG+RQLMCMARALLR+++VLVMDEATANVDPETD LIQ M+E F +CT+LCIAHRLHT+ +YDRV+VL++G++ EY +PL LL +P S F A+C+KTG LE LK AR
Sbjct: 1459 VDESGGNFSVGERQLMCMARALLRKSSVLVMDEATANVDPETDLLIQSTMREEFRNCTVLCIAHRLHTIIYYDRVMVLERGELMEYASPLELLDDPNSLFYALCKKTGALEQLKETAR 1576
BLAST of mRNA_H-canaliculatus_F_contig12190.1884.1 vs. uniprot
Match: A0A7S3Y0L7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0L7_HETAK) HSP 1 Score: 157 bits (396), Expect = 1.510e-40 Identity = 75/131 (57.25%), Postives = 102/131 (77.86%), Query Frame = 1
Query: 193 LAGAVSAEGSNLSVGQRQLMCMARALLRRAAVLVMDEATANVDPETDSLIQEAMKEGFGDCTILCIAHRLHTVAFYDRVLVLDQGKVAEYDTPLALLQNPYSQFRAMCEKTGDLEGLKRVARESARNSASK 585
L AV+ G NLSVGQRQL+C+ARA LRRA +LVMDEATANVDP+TD L+QEA++ F T+LCIAHRLHTV +YDRV+VL++G++AEYD+P LL+ S F +CE++GDL+ L+ A ++ ++ S+
Sbjct: 385 LGAAVAEGGGNLSVGQRQLLCLARAALRRAPILVMDEATANVDPDTDELLQEALRTEFAGATVLCIAHRLHTVIYYDRVMVLERGQLAEYDSPAVLLRQKGSLFFKLCERSGDLDQLRATAEDAEASALSE 515
BLAST of mRNA_H-canaliculatus_F_contig12190.1884.1 vs. uniprot
Match: A0A7S3GMW8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GMW8_9STRA) HSP 1 Score: 146 bits (369), Expect = 6.130e-39 Identity = 74/132 (56.06%), Postives = 97/132 (73.48%), Query Frame = 1
Query: 184 RVSLAGAVSAE-GSNLSVGQRQLMCMARALLRRAAVLVMDEATANVDPETDSLIQEAMKEGFGDCTILCIAHRLHTVAFYDRVLVLDQGKVAEYDTPLALLQNPYSQFRAMCEKTGDLEGLKRVARESARNS 576
R SLA AE G+N S+GQRQL+CMARA+LR+A+VLV+DE TA+VD ETD+LIQE ++ G CT++CIAHRLHT+A+YD VLV+DQG+ AE+ P L+Q S FR MC +GD E L A ++ + S
Sbjct: 118 RGSLANKQVAEKGANFSLGQRQLLCMARAILRKASVLVLDECTASVDHETDALIQETVRRELGHCTVICIAHRLHTIAYYDNVLVMDQGRKAEFAPPFELIQQENSLFRQMCVTSGDYEELYATAEDAYKQS 249
BLAST of mRNA_H-canaliculatus_F_contig12190.1884.1 vs. uniprot
Match: A0A7S0XFK2_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XFK2_9STRA) HSP 1 Score: 152 bits (383), Expect = 4.280e-38 Identity = 72/121 (59.50%), Postives = 97/121 (80.17%), Query Frame = 1
Query: 205 VSAEGSNLSVGQRQLMCMARALLRRAAVLVMDEATANVDPETDSLIQEAMKEGFGDCTILCIAHRLHTVAFYDRVLVLDQGKVAEYDTPLALLQNPYSQFRAMCEKTGDLEGLKRVARESA 567
++ +GSNLSVGQRQL+CMARALLR+A +LV+DE TANVD ETDSLIQ+ ++ + T+LCIAHRLHT+AFYD VLV+D+G VAEYD+PL L+Q+ S F +MC +GD + L +A+ ++
Sbjct: 524 IAEKGSNLSVGQRQLLCMARALLRKAPILVLDECTANVDHETDSLIQDTVRNELTNITVLCIAHRLHTIAFYDLVLVMDKGSVAEYDSPLKLMQDDKSIFYSMCMNSGDFDNLYNIAKAAS 644
BLAST of mRNA_H-canaliculatus_F_contig12190.1884.1 vs. uniprot
Match: A0A4V1IPH2_9FUNG (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4V1IPH2_9FUNG) HSP 1 Score: 142 bits (359), Expect = 2.810e-37 Identity = 73/128 (57.03%), Postives = 94/128 (73.44%), Query Frame = 1
Query: 190 SLAGAVSAEGSNLSVGQRQLMCMARALLRRAAVLVMDE--ATANVDPETDSLIQEAMKEGFGDCTILCIAHRLHTVAFYDRVLVLDQGKVAEYDTPLALLQNPYSQFRAMCEKTGDLEGLKRVARESA 567
SL AV+ G N S GQRQL+C+ARALLRR+ ++V+DE ATA+VD TD+ IQE+++ F +CT+LC+AHRL TVA YDR+LVLD G+V E TP ALLQ P FR MCE+T DL L +A ++A
Sbjct: 142 SLESAVAENGGNFSQGQRQLLCLARALLRRSRIVVLDELRATASVDDRTDAAIQESIRTEFKNCTVLCVAHRLRTVADYDRILVLDDGRVVELGTPHALLQKPDGWFRRMCEETADLSALVELAGQAA 269
BLAST of mRNA_H-canaliculatus_F_contig12190.1884.1 vs. uniprot
Match: A0A4Y2L9K4_ARAVE (Multidrug resistance-associated protein 4 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2L9K4_ARAVE) HSP 1 Score: 142 bits (358), Expect = 2.040e-36 Identity = 76/128 (59.38%), Postives = 92/128 (71.88%), Query Frame = 1
Query: 205 VSAEGSNLSVGQRQLMCMARALLRRAAVLVMDEATANVDPETDSLIQEAMKEGFGDCTILCIAHRLHTVAFYDRVLVLDQGKVAEYDTPLALLQNPYSQFRAMCEKTGDLEGLKRVARESARNSASKS 588
VS G N SVGQRQL+C+ARA+LRR VLV+DEATANVDP TDSLIQE +++ F CT+L IAHRLHT+ DRVLVLD G+V E+D P LLQN S F M + TG G+ + RE ARN+ K+
Sbjct: 166 VSEGGGNFSVGQRQLICLARAILRRNRVLVLDEATANVDPNTDSLIQETIRDRFAHCTVLTIAHRLHTIMDSDRVLVLDAGEVKEFDAPFTLLQNRNSLFSHMVQMTGP--GMAQQLREVARNAYLKN 291
BLAST of mRNA_H-canaliculatus_F_contig12190.1884.1 vs. uniprot
Match: T1GCD1_MEGSC (ABC transporter domain-containing protein n=1 Tax=Megaselia scalaris TaxID=36166 RepID=T1GCD1_MEGSC) HSP 1 Score: 135 bits (340), Expect = 3.210e-36 Identity = 70/122 (57.38%), Postives = 89/122 (72.95%), Query Frame = 1
Query: 205 VSAEGSNLSVGQRQLMCMARALLRRAAVLVMDEATANVDPETDSLIQEAMKEGFGDCTILCIAHRLHTVAFYDRVLVLDQGKVAEYDTPLALLQNPYSQFRAMCEKTG--DLEGLKRVARES 564
V+ GSN SVGQRQL+C+ARA+LR VLV+DEATANVDP+TD+LIQ+ ++ F +CT+L +AHRLHTV DR+LV+D G E+D P LLQN R M + TG D E LKRVA+E+
Sbjct: 2 VTERGSNFSVGQRQLICLARAILRNNKVLVLDEATANVDPQTDALIQKTIRRKFKECTVLTVAHRLHTVMDSDRILVMDAGFAKEFDAPHLLLQNSRGLLRQMVDATGAYDSEQLKRVAKET 123 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12190.1884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12190.1884.1 >prot_H-canaliculatus_F_contig12190.1884.1 ID=prot_H-canaliculatus_F_contig12190.1884.1|Name=mRNA_H-canaliculatus_F_contig12190.1884.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=136bp MCMARALLRRAAVLVMDEATANVDPETDSLIQEAMKEGFGDCTILCIAHRback to top mRNA from alignment at H-canaliculatus_F_contig12190:473..2617- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12190.1884.1 ID=mRNA_H-canaliculatus_F_contig12190.1884.1|Name=mRNA_H-canaliculatus_F_contig12190.1884.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2145bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12190:473..2617- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12190:473..2617- >mRNA_H-canaliculatus_F_contig12190.1884.1 ID=mRNA_H-canaliculatus_F_contig12190.1884.1|Name=mRNA_H-canaliculatus_F_contig12190.1884.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=816bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12190:473..2617- (Hapterophycus canaliculatus Oshoro5f female)back to top |