mRNA_H-canaliculatus_F_contig1214.1853.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1214.1853.1 vs. uniprot
Match: D7FW90_ECTSI (Glyco_hydro_114 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW90_ECTSI) HSP 1 Score: 260 bits (664), Expect = 2.740e-77 Identity = 124/146 (84.93%), Postives = 131/146 (89.73%), Query Frame = 1
Query: 1 DVEVSTFDEIKAKGSVVICYFSAGTKEDWREDADDFPEEALGEPLGDWEGEVWLDVNNEGVRDVMAARLDTAALKGCDGVEPDNVQVYAEAMWGADTGVNVTADEQLDYNLFLAREAHSRNLSIGLKNDLDHLTDLEPFFDWAINE 438
DV+ S FDEIKA+GSVVICYFSAGT+EDWREDADDFPEE LG PL DW+GEVW+DVNNE VR VMAARLD A KGCDGVEPDNVQVYAE +WGADTGVNVTADEQLDYN FLA EAHSRNLSIGLKNDLDHL +LEP FDWAINE
Sbjct: 8 DVDTSVFDEIKAQGSVVICYFSAGTREDWREDADDFPEEGLGAPLADWDGEVWVDVNNEEVRAVMAARLDKAVEKGCDGVEPDNVQVYAEILWGADTGVNVTADEQLDYNTFLATEAHSRNLSIGLKNDLDHLAELEPLFDWAINE 153
BLAST of mRNA_H-canaliculatus_F_contig1214.1853.1 vs. uniprot
Match: A0A150SSH0_SORCE (Endo alpha-1,4 polygalactosaminidase n=3 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150SSH0_SORCE) HSP 1 Score: 214 bits (545), Expect = 1.100e-59 Identity = 114/204 (55.88%), Postives = 133/204 (65.20%), Query Frame = 1
Query: 13 STFDEIKAKGSVVICYFSAGTKEDWREDADDFPEEALGEPLGDWEGEVWLDVNNEGVRDVMAARLDTAALKGCDGVEPDNVQVYAEAMWGADTGVNVTADEQLDYNLFLAREAHSRNLSIGLKNDLDHLTDLEPFFDWAINESCFEWDECEGYMSTFIAKGKAVFHAEY----ETNLTFCAEANAMGLSSLLKAYDLGPARCSC 612
+T D ++A G VICYFSAG+ EDWR DA FP ALG PL W GE WLD + GVRDVM ARLD A K CDGVEPDNV Y +G +TA QLDYN FLA EAH+R LSIGLKNDLD + DL FDWA+NE C +DECE ++ FI GKAVFHAEY + N CA+ +GLS+L+K DL R +C
Sbjct: 35 ATIDALRAAGKKVICYFSAGSSEDWRSDASRFPAAALGNPLDGWPGERWLDTRSAGVRDVMKARLDLAVQKRCDGVEPDNVDGYTNG-----SGFPLTAATQLDYNRFLAAEAHARGLSIGLKNDLDQVRDLVGHFDWALNEECHAYDECE-MLTPFIRAGKAVFHAEYVAASQANAV-CADTKPLGLSTLIKRLDLDAWRVAC 231
BLAST of mRNA_H-canaliculatus_F_contig1214.1853.1 vs. uniprot
Match: A0A7V4LGC7_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4LGC7_9DELT) HSP 1 Score: 214 bits (546), Expect = 1.700e-58 Identity = 109/208 (52.40%), Postives = 138/208 (66.35%), Query Frame = 1
Query: 1 DVEVSTFDEIKAKGSVVICYFSAGTKEDWREDADDFPEEALGEPLGDWEGEVWLDVNNEGVRDVMAARLDTAALKGCDGVEPDNVQVYAEAMWGADTGVNVTADEQLDYNLFLAREAHSRNLSIGLKNDLDHLTDLEPFFDWAINESCFEWDECEGYMSTFIAKGKAVFHAEY-ETNLT--FCAEANAMGLSSLLKAYDLGPARCSCQ 615
D + D ++A+G VICYFSAG++EDWREDA DFP A+GEPL W GE WLD+ + VR +M ARLD A + CDGVEPDNV YA D+G +TA QLDYN FLA EAH+R LS+GLKNDL+ + DL FDWA++E CF+WDEC+ + F+A GKAVF EY + +L C ANA+ +L+K DL R C+
Sbjct: 131 DAPQAVIDGLRARGVAVICYFSAGSREDWREDAGDFPPAAVGEPLDGWPGERWLDIRSPDVRRIMQARLDRAVARRCDGVEPDNVDAYAN-----DSGFPLTAAHQLDYNRFLAAEAHARGLSVGLKNDLEQVEDLLADFDWALDEECFQWDECD-LLRPFVAAGKAVFQVEYGDASLAADVCPRANALDFDTLIKRLDLDAWRIPCR 332
BLAST of mRNA_H-canaliculatus_F_contig1214.1853.1 vs. uniprot
Match: A0A832BEU9_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A832BEU9_9DELT) HSP 1 Score: 216 bits (549), Expect = 4.070e-58 Identity = 114/212 (53.77%), Postives = 141/212 (66.51%), Query Frame = 1
Query: 1 DVEVSTFDEIKAKGSVVICYFSAGTKEDWREDADDFPEEALGEPLGDWEGEVWLDVNNEGVRDVMAARLDTAALKGCDGVEPDNVQVYAEAMWGADTGVNVTADEQLDYNLFLAREAHSRNLSIGLKNDLDHLTDLEPFFDWAINESCFEWDECEGYMSTFIAKGKAVFHAEYETNLT--------FCAEANAMGLSSLLKAYDLGPARCSC 612
D E+ST +K G VVICYFSAG+ E+WR DA DFPEEALG PL W GE WLD+ + GVR V AARLD A +GCDGVEPDNV YA + G+ +T +QLDYNL+LA +AH+R LS+GLKNDLD L L FDWA+NE C +DECE ++ FI GKAVF+ Y ++ CA A +G S+L+K +DLGP R +C
Sbjct: 195 DAELST---LKTDGRVVICYFSAGSYEEWRPDAADFPEEALGTPLDGWPGERWLDIRDPGVRKVQAARLDLAEARGCDGVEPDNVDGYAN-----NNGLGLTGRDQLDYNLWLAAQAHARGLSVGLKNDLDQLDALVSAFDWALNEECAAYDECE-VLTPFIDSGKAVFNVAYVDDIADGPALADEVCAAALGLGFSTLIKEWDLGPWRIAC 397
BLAST of mRNA_H-canaliculatus_F_contig1214.1853.1 vs. uniprot
Match: A0A7X9IZM4_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X9IZM4_9DELT) HSP 1 Score: 213 bits (543), Expect = 4.600e-58 Identity = 108/204 (52.94%), Postives = 136/204 (66.67%), Query Frame = 1
Query: 13 STFDEIKAKGSVVICYFSAGTKEDWREDADDFPEEALGEPLGDWEGEVWLDVNNEGVRDVMAARLDTAALKGCDGVEPDNVQVYAEAMWGADTGVNVTADEQLDYNLFLAREAHSRNLSIGLKNDLDHLTDLEPFFDWAINESCFEWDECEGYMSTFIAKGKAVFHAEY-ETNL--TFCAEANAMGLSSLLKAYDLGPARCSCQ 615
+ D ++A+G VVICYFSAG++E+WREDA DFP A+GEPL W GE WLD+ + VR +M ARLD A + CDGVEPDNV YA D+G + A QLDYN FLA EAH+R LS+GLKNDL+ + DL FDWA+NE CF+WDEC+ + F+ GKAVF EY + L T C ANA+ +L+K DL R C+
Sbjct: 137 AVIDGLRARGVVVICYFSAGSREEWREDAGDFPAAAVGEPLDGWPGERWLDIRSPDVRRIMQARLDRAVARRCDGVEPDNVDAYAN-----DSGFPLIAAHQLDYNRFLAAEAHARGLSVGLKNDLEQVEDLLADFDWALNEECFQWDECD-LLRPFVVAGKAVFQVEYGDAGLAGTICPRANALDFDTLIKRLDLDAWRIPCR 334
BLAST of mRNA_H-canaliculatus_F_contig1214.1853.1 vs. uniprot
Match: A0A4R3HPG2_9GAMM (Glyco_hydro_114 domain-containing protein n=1 Tax=Reinekea marinisedimentorum TaxID=230495 RepID=A0A4R3HPG2_9GAMM) HSP 1 Score: 211 bits (537), Expect = 2.380e-57 Identity = 110/213 (51.64%), Postives = 143/213 (67.14%), Query Frame = 1
Query: 1 DVEVSTFDEIKAKGSVVICYFSAGTKEDWREDADDFPEEALGEPLGDWEGEVWLDVNNEGVRDVMAARLDTAALKGCDGVEPDNVQVYAEAMWGADTGVNVTADEQLDYNLFLAREAHSRNLSIGLKNDLDHLTDLEPFFDWAINESCFEWDECEGYMSTFIAKGKAVFHAEY---ETNLT-----FCAEANAMGLSSLLKAYDLGPA-RCSC 612
D S +E++A G VICYFSAG+ EDWRED DFPEEALG+ L W+GE WLD+ NE VR +MAAR+D AA KGCDGVEPDNV Y+ TG +++ D+QLDYN+FLA AH R L++ LKND++ + DL +FD++INE CFE+DECE + FI +GK VFH Y E+ L+ C EA A+ +L+ +DL + R SC
Sbjct: 119 DTHTSVIEELQADGKAVICYFSAGSYEDWREDEADFPEEALGKDLDGWDGENWLDITNETVRKIMAARMDLAAEKGCDGVEPDNVDGYSNK-----TGFDLSYDDQLDYNIFLAEAAHERGLAVALKNDVEQVDDLVDYFDFSINEECFEYDECET-LEPFIEQGKPVFHTSYVDEESELSDKAGEICTEALALQFRALILPWDLDDSFRYSC 325
BLAST of mRNA_H-canaliculatus_F_contig1214.1853.1 vs. uniprot
Match: A0A7V5U264_9BACT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Thermodesulfatator atlanticus TaxID=501497 RepID=A0A7V5U264_9BACT) HSP 1 Score: 207 bits (528), Expect = 1.070e-56 Identity = 110/199 (55.28%), Postives = 133/199 (66.83%), Query Frame = 1
Query: 22 DEIKAKGSVVICYFSAGTKEDWREDADDFPEEALGEPLGDWEGEVWLDVNNEGVRD-VMAARLDTAALKGCDGVEPDNVQVYAEAMWGADTGVNVTADEQLDYNLFLAREAHSRNLSIGLKNDLDHLTDLEPFFDWAINESCFEWDECEGYMSTFIAKGKAVFHAEYETNLT-FCAEANAMGLSSLLKAYDLGPARCSC 612
+E+ G VVICYFSAGT E WR DA+ FPEE LGEPL DW E WLD+ V +M ARLD A KGCDGVEPDNV Y ++G +T ++QL+YNL+LA +AH R LS+GLKNDLD + LEP+FDWA+NE CF + ECE + FI KGKAVF EY + FC EANAMG SS+ K +L R +C
Sbjct: 86 EELHRLGKVVICYFSAGTYEPWRPDAEKFPEEILGEPLVDWPDERWLDIRRLDVLGPIMEARLDLAVEKGCDGVEPDNVDAYQN-----ESGFPLTYEDQLNYNLWLAEQAHKRGLSVGLKNDLDQIPALEPYFDWALNEECFYYGECEK-LRPFIEKGKAVFQVEYYLDPEDFCPEANAMGFSSMKKRPELDAWRIAC 278
BLAST of mRNA_H-canaliculatus_F_contig1214.1853.1 vs. uniprot
Match: A0A6H5JZ77_9PHAE (Glyco_hydro_114 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ77_9PHAE) HSP 1 Score: 210 bits (535), Expect = 2.230e-56 Identity = 99/213 (46.48%), Postives = 139/213 (65.26%), Query Frame = 1
Query: 1 DVEVSTFDEIKAKGSVVICYFSAGTKEDWREDADDFPEEALGEPLGDWEGEVWLDVNNEGVRDVMAARLDTAALKGCDGVEPDNVQVYAEAMWGADTGVNVTADEQLDYNLFLAREAHSRNLSIGLKNDLDHLTDLEPFFDWAINESCFEWDECEGYMSTFIAKGKAVFHAEYETNLTFCAEANAMGLSSLLKAYDLGPARCSCQDPSTNSQC 639
D DE+ KG V+CY S GT EDWR+DA +FP A+G + W GE W+DVN++ VR++M AR++ A+ CD VEPDN+ VY E G+ TGV+V+ EQ++YN + A H+ + +GLKN ++ + L FD+A+NE C EW+EC Y TF+A+GK V++ EY + C EANA+GL ++LK+YDL A CSC DPS + C
Sbjct: 173 DAGQGVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYTE---GSSTGVSVSEAEQIEYNSWFADIVHAYGMGVGLKNAVELVPILVNKFDFALNEECHEWNECNVYEDTFLAEGKPVYNVEYNLGNSVCDEANALGLDTILKSYDLDAAFCSCVDPSRDVDC 382
BLAST of mRNA_H-canaliculatus_F_contig1214.1853.1 vs. uniprot
Match: A6GAS5_9DELT (Putative endo alpha-1,4 polygalactosaminidase n=2 Tax=Plesiocystis pacifica TaxID=191768 RepID=A6GAS5_9DELT) HSP 1 Score: 207 bits (527), Expect = 3.090e-56 Identity = 110/212 (51.89%), Postives = 133/212 (62.74%), Query Frame = 1
Query: 1 DVEVSTFDEIKAKGSVVICYFSAGTKEDWREDADDFPEEALGEPLGDWEGEVWLDVNNEGVRDVMAARLDTAALKGCDGVEPDNVQVYAEAMWGADTGVNVTADEQLDYNLFLAREAHSRNLSIGLKNDLDHLTDLEPFFDWAINESCFEWDECEGYMSTFIAKGKAVFHAEYETNL--------TFCAEANAMGLSSLLKAYDLGPARCSC 612
D E T E++A+G VICYFSAG+ EDWR DAD FP ALGEPL W GE WLDV +E VRD+M ARLD A +GCD VEPDNV Y D+G +TA +QLDYN FLA EAH+R+LS+GLKNDL+ + +L FDWA++E C WDEC + F+ GKAV H EY C + A G SSL+K +DL P C
Sbjct: 103 DNEAQTVAELQAQGRAVICYFSAGSFEDWRPDADAFPPAALGEPLDGWPGERWLDVRDEAVRDIMRARLDLAVERGCDAVEPDNVDGYIN-----DSGFPLTASDQLDYNRFLAEEAHARDLSVGLKNDLEQIPELVDDFDWALDEECLAWDEC-ALLQPFLDAGKAVLHVEYVDEPRQGQAAADALCPQVPA-GFSSLIKTWDLDPWVIPC 307
BLAST of mRNA_H-canaliculatus_F_contig1214.1853.1 vs. uniprot
Match: A0A150Q0F2_SORCE (Endo alpha-1,4 polygalactosaminidase n=3 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150Q0F2_SORCE) HSP 1 Score: 203 bits (517), Expect = 3.440e-56 Identity = 107/207 (51.69%), Postives = 130/207 (62.80%), Query Frame = 1
Query: 1 DVEVSTFDEIKAKGSVVICYFSAGTKEDWREDADDFPEEALGEPLGDWEGEVWLDVNNEGVRDVMAARLDTAALKGCDGVEPDNVQVYAEAMWGADTGVNVTADEQLDYNLFLAREAHSRNLSIGLKNDLDHLTDLEPFFDWAINESCFEWDECEGYMSTFIAKGKAVFHAEY---ETNLTFCAEANAMGLSSLLKAYDLGPARCSC 612
D ST D ++A G V+CYFS G+ EDWR DA FP ALG L W GE WLD + VRD+M ARLD AA K CDGVEPDNV Y + G +T+ QLDYN FLA EAH+R LSIGLKNDLD + DL FDWA+NE C+ +DEC+ ++ FI GKAVFHAEY C+ +GLS+++K DL R +C
Sbjct: 8 DTPQSTIDALRAAGKKVVCYFSGGSYEDWRSDASKFPAAALGNALDGWPGERWLDTRSAAVRDLMKARLDLAARKRCDGVEPDNVDGYQN-----NPGFPLTSATQLDYNRFLAAEAHARGLSIGLKNDLDQVRDLVGSFDWALNEECYAYDECD-MLTPFIRAGKAVFHAEYVDASQASAVCSATKPLGLSTVIKRLDLDAWRIAC 208 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1214.1853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1214.1853.1 >prot_H-canaliculatus_F_contig1214.1853.1 ID=prot_H-canaliculatus_F_contig1214.1853.1|Name=mRNA_H-canaliculatus_F_contig1214.1853.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=211bp MAARLDTAALKGCDGVEPDNVQVYAEAMWGADTGVNVTADEQLDYNLFLAback to top mRNA from alignment at H-canaliculatus_F_contig1214:17761..26896- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1214.1853.1 ID=mRNA_H-canaliculatus_F_contig1214.1853.1|Name=mRNA_H-canaliculatus_F_contig1214.1853.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=9136bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1214:17761..26896- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1214:17761..26896- >mRNA_H-canaliculatus_F_contig1214.1853.1 ID=mRNA_H-canaliculatus_F_contig1214.1853.1|Name=mRNA_H-canaliculatus_F_contig1214.1853.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1266bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1214:17761..26896- (Hapterophycus canaliculatus Oshoro5f female)back to top |