mRNA_H-canaliculatus_F_contig1214.1851.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A6H5L9R7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9R7_9PHAE) HSP 1 Score: 332 bits (850), Expect = 7.190e-110 Identity = 183/250 (73.20%), Postives = 201/250 (80.40%), Query Frame = 1
Query: 1 LPVDYLPEEEA----EEALGSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
LP + EEE EEAL SPV IKVVGVGGGGGNAVDGMITTATR+L GV+F+AMNTDTQAL KSHAEVK+ LGSTVTRGLGAGGKPEVG AAA+ESLPEIEK LAGAD+VF+TAG+GG EPF FEGRQR RQAA+GLAELR+AADTVLVVAND LLEIVPG+MTM+DAFLVADD+LRQGVIGTSELIVRPGLINVDFADVR++I SG ALIG+GTG+GK R
Sbjct: 14 LPPEDGEEEEVGFHEEEALVSPVSIKVVGVGGGGGNAVDGMITTATRKLSGVDFIAMNTDTQALTKSHAEVKIALGSTVTRGLGAGGKPEVGLAAAMESLPEIEKTLAGADLVFVTAGMGGGTGTGAAPVIASAAKGMGCVTVAVVTEPFGFEGRQRYRQAAAGLAELREAADTVLVVANDKLLEIVPGRMTMKDAFLVADDVLRQGVIGTSELIVRPGLINVDFADVRQVITKSGEALIGIGTGSGKTR 263
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: D7FW93_ECTSI (Plastid division protein FtsZ n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW93_ECTSI) HSP 1 Score: 331 bits (849), Expect = 1.090e-109 Identity = 179/234 (76.50%), Postives = 194/234 (82.91%), Query Frame = 1
Query: 37 EALGSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
EAL SPV IKVVGVGGGGGNAVDGMITTATR+L GVEF+AMNTDTQAL KSHAEVK+ LGS VTRGLGAGGKPEVG AAA ESLPEIEK LAGAD+VF+TAG+GG EPF FEGRQRSRQAA+GLAELR+AADTVLVVAND LLEIVPG+MTM+DAFLVADD+LRQGVIGTSELIVRPGLINVDFADVR++I NSGTALIG+G G+GK R
Sbjct: 95 EALVSPVSIKVVGVGGGGGNAVDGMITTATRKLSGVEFVAMNTDTQALTKSHAEVKIALGSKVTRGLGAGGKPEVGLAAATESLPEIEKTLAGADLVFVTAGMGGGTGTGAAPVIASAAKGMGCVTVAVVTEPFGFEGRQRSRQAAAGLAELREAADTVLVVANDKLLEIVPGRMTMKDAFLVADDVLRQGVIGTSELIVRPGLINVDFADVRQVITNSGTALIGIGMGSGKTR 328
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A835Z1V3_9STRA (Tubulin/FtsZ, GTPase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V3_9STRA) HSP 1 Score: 258 bits (659), Expect = 2.910e-81 Identity = 144/229 (62.88%), Postives = 168/229 (73.36%), Query Frame = 1
Query: 52 PVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
PV IKVVGVGG GGNA++GM++T T+ L GVEF+AMNTD QAL S A KL LG + T GLGAGG+PEVG+AAA ES EI + L GADMVFITAG+GG PF+FEGR R+RQAA GLA L K AD +LVVAND LL+I+P +M+M DAFLVADDILRQGVIGTSELI+RPGLINVDFADVR +++NSG+ALIG+GTG G R
Sbjct: 2 PVLIKVVGVGGAGGNAINGMVST-TQNLQGVEFIAMNTDQQALHTSLAGRKLALGHSSTGGLGAGGRPEVGEAAAKESRQEITELLVGADMVFITAGMGGGTGTGAAPVVAEIAKGLGCLTVGVVTSPFQFEGRSRARQAAVGLAALEKHADALLVVANDRLLQIIPSRMSMTDAFLVADDILRQGVIGTSELILRPGLINVDFADVRSVVQNSGSALIGIGTGVGPTR 229
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A7S2GNE8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GNE8_9STRA) HSP 1 Score: 229 bits (583), Expect = 4.560e-70 Identity = 127/240 (52.92%), Postives = 160/240 (66.67%), Query Frame = 1
Query: 19 PEEEAEEALGSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
P+ GSP IKV+GVGGGGGNAV+ M+ T + GVEF +NTD QAL KS A+ L +G VTRGLGAGG P VG++AA ES EI + GAD+VF+TAG+GG +PF FEGR+R +QA +AEL+ DT++VV+ND LL+IVP + DAFLVADDILRQGV+G SE+IV+PGLINVDFADVR ++ ++GTAL+G+GTG GK R
Sbjct: 23 PQSSPAMTTGSPCIIKVIGVGGGGGNAVNRMVET---NINGVEFWTVNTDAQALEKSTAKNTLNIGGIVTRGLGAGGNPSVGKSAADESRDEIAAVVRGADLVFVTAGMGGGTGSGAAPVVAEVAKDMGALTVGVVTKPFGFEGRKRMQQANDAIAELQSKVDTLIVVSNDKLLQIVPENTPLADAFLVADDILRQGVVGISEIIVKPGLINVDFADVRAVMGDAGTALMGIGTGKGKTR 259
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A7S2KCL3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCL3_9STRA) HSP 1 Score: 226 bits (577), Expect = 3.250e-69 Identity = 125/232 (53.88%), Postives = 158/232 (68.10%), Query Frame = 1
Query: 49 SPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAE--VKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
SP IKV+GVGGGG NA+D M+ T R+ GVEF A+NTD QAL +S A+ L +G+TVTRGLGAGG PEVG+ AA ES EI AGAD+VF+T+G+GG +PF FEGR+R +QA +A LRKA DTV++V+N+ LLEI+P + +F VADDILRQGV+G SE+I+RPGLINVDFADVR ++ +GTAL+G+G GTGK R
Sbjct: 55 SPCVIKVIGVGGGGSNAIDRMLET---RIGGVEFWAVNTDAQALGRSKAKGAAVLNIGTTVTRGLGAGGNPEVGRLAAEESREEIAAVCAGADLVFVTSGMGGGTGSGAAPVVAEIAKESGALTVAIVTKPFAFEGRRRMKQATDAIARLRKAVDTVIIVSNNKLLEIIPENTPLERSFAVADDILRQGVVGISEIIIRPGLINVDFADVRSVMYEAGTALMGIGMGTGKTR 283
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A7S2CTQ1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTQ1_9STRA) HSP 1 Score: 227 bits (579), Expect = 9.660e-69 Identity = 127/230 (55.22%), Postives = 157/230 (68.26%), Query Frame = 1
Query: 49 SPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
SP IKVVGVGGGGGNAV+ M+ T + GVEF A+NTD QAL KS A+ L +G T TRGLGAGG P G+AAA ES EI + G+D+VF+TAG+GG +PF FEGR+R +QA +AEL+ DT++VV+ND LL+IVP + DAFLVADDILRQGV+G SE+IV+PGLINVDFADVR ++ N+GTAL+G+GTG GK R
Sbjct: 91 SPCIIKVVGVGGGGGNAVNRMVET---NIEGVEFWAVNTDAQALTKSAAKKVLNIGKTSTRGLGAGGNPAQGKAAADESRDEIANVVRGSDLVFVTAGMGGGTGSGAAPVVAEVSKDMGALTVGVVTKPFGFEGRKRMQQANDAIAELQSKVDTLIVVSNDKLLQIVPENTPLADAFLVADDILRQGVVGISEIIVKPGLINVDFADVRTVMGNAGTALMGIGTGKGKTR 317
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A4D9DAM3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAM3_9STRA) HSP 1 Score: 228 bits (580), Expect = 1.480e-68 Identity = 124/231 (53.68%), Postives = 158/231 (68.40%), Query Frame = 1
Query: 46 GSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
GSP RIKV+GVGGGG NAV+ M+T + + GVEF A+NTD QALAKS KL +G+ +TRGLGAGGKP VG+ AA ES EI +A+AGAD+VF+TAG+GG PF FEGRQR QA + + E++ DT++ V+ND LL+IVP + DAFLVAD+ LR GV+G S++IV+PGLINVDFADVR +++N+GTAL+G G G GK R
Sbjct: 89 GSPCRIKVIGVGGGGSNAVNRMVT---QDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTR 316
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A7S4A4G9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4G9_9STRA) HSP 1 Score: 224 bits (570), Expect = 3.180e-67 Identity = 126/230 (54.78%), Postives = 158/230 (68.70%), Query Frame = 1
Query: 49 SPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
+P IKVVGVGGGGGNAV+ M+ T V +F AMNTD QAL++S A + +G TRGLGAGG P+VGQAAA ES EI AL+GADMVF+TAG+GG +PF FEGR+R++QAA A L++A DT++V++ND LL+IVP TM AFLVADDILRQGV+G SE+I++PGLINVDFADVR I+ ++GTAL+G+G GK R
Sbjct: 113 APCCIKVVGVGGGGGNAVNRMVETDAGSFV--DFWAMNTDAQALSRSLAGNTMNIGRETTRGLGAGGTPDVGQAAAEESRAEIAAALSGADMVFVTAGMGGGTGSGAAPIVASVAKELGALTVGVVTKPFGFEGRKRAQQAAQATARLQEAVDTLIVISNDRLLQIVPEGTTMEGAFLVADDILRQGVVGISEIIIKPGLINVDFADVRSIMTDAGTALMGIGQSKGKDR 340
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A7S2XJI3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJI3_9STRA) HSP 1 Score: 225 bits (574), Expect = 4.430e-67 Identity = 128/236 (54.24%), Postives = 160/236 (67.80%), Query Frame = 1
Query: 34 EEALGSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXX-EPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
E GSP IKV+GVGGGGGNAV+ MI T R+ GV F AMNTD QAL S A L +G +VTRGLGAGG P +G+ AA+E+ E++ GADMVFITAG+GG +PF FEGRQR +QA + +AELRK DT++VV+ND LL IVP + DAFLVADDILRQGV+G SE+I++ GL+NVDFAD+R +++++GTAL+GVGTG GK R
Sbjct: 110 EGGAGSPCVIKVLGVGGGGGNAVNRMIQT---RIEGVSFWAMNTDAQALRTSLAPNTLNIGRSVTRGLGAGGDPGMGKKAALENAEEVKAVCMGADMVFITAGMGGGTGSGAAPVVAEIAKKECGCLTVGVVTKPFRFEGRQRMKQAEAAIAELRKHVDTLIVVSNDKLLRIVPDNTPVTDAFLVADDILRQGVVGISEIIIKTGLVNVDFADIRAVMKDAGTALMGVGTGVGKSR 342
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: K0T255_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T255_THAOC) HSP 1 Score: 224 bits (571), Expect = 4.530e-67 Identity = 128/251 (51.00%), Postives = 167/251 (66.53%), Query Frame = 1
Query: 4 PVDYLPEEEAE------EALGSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
P Y P E + E +P IKV+GVGGGGGNAV+ MI T R+ GV F A+NTD QALAKS + L +G ++TRGLGAGG P+VG+ +A+E+ EI++ G+DMVFITAG+GG +PF FEGR+R +QA + + ELRK DT++VV+ND LL IVP + DAFLVADDILRQGV+G SE+I++ GL+NVDFADVR +++++GTAL+GVGTG GK R
Sbjct: 75 PSTYNPPIETQGGAIMPEGGANPCVIKVLGVGGGGGNAVNRMIQT---RIDGVSFWAVNTDAQALAKSLSPNVLNIGRSLTRGLGAGGVPDVGKESALENTAEIKEICRGSDMVFITAGMGGGTGSGAGPIVAEIARDEGCLTVGVVTKPFAFEGRKRMKQAEAAIVELRKHVDTLIVVSNDKLLRIVPENTPVTDAFLVADDILRQGVVGISEIIIKTGLVNVDFADVRAVMKDAGTALMGVGTGAGKTR 322 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1214.1851.1 >prot_H-canaliculatus_F_contig1214.1851.1 ID=prot_H-canaliculatus_F_contig1214.1851.1|Name=mRNA_H-canaliculatus_F_contig1214.1851.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=246bp LPVDYLPEEEAEEALGSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFback to top mRNA from alignment at H-canaliculatus_F_contig1214:421..2826- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1214.1851.1 ID=mRNA_H-canaliculatus_F_contig1214.1851.1|Name=mRNA_H-canaliculatus_F_contig1214.1851.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2406bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1214:421..2826- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1214:421..2826- >mRNA_H-canaliculatus_F_contig1214.1851.1 ID=mRNA_H-canaliculatus_F_contig1214.1851.1|Name=mRNA_H-canaliculatus_F_contig1214.1851.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1476bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1214:421..2826- (Hapterophycus canaliculatus Oshoro5f female)back to top |