mRNA_H-canaliculatus_F_contig1214.1851.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1214.1851.1
Unique NamemRNA_H-canaliculatus_F_contig1214.1851.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A6H5L9R7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9R7_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 7.190e-110
Identity = 183/250 (73.20%), Postives = 201/250 (80.40%), Query Frame = 1
Query:    1 LPVDYLPEEEA----EEALGSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
            LP +   EEE     EEAL SPV IKVVGVGGGGGNAVDGMITTATR+L GV+F+AMNTDTQAL KSHAEVK+ LGSTVTRGLGAGGKPEVG AAA+ESLPEIEK LAGAD+VF+TAG+GG                          EPF FEGRQR RQAA+GLAELR+AADTVLVVAND LLEIVPG+MTM+DAFLVADD+LRQGVIGTSELIVRPGLINVDFADVR++I  SG ALIG+GTG+GK R
Sbjct:   14 LPPEDGEEEEVGFHEEEALVSPVSIKVVGVGGGGGNAVDGMITTATRKLSGVDFIAMNTDTQALTKSHAEVKIALGSTVTRGLGAGGKPEVGLAAAMESLPEIEKTLAGADLVFVTAGMGGGTGTGAAPVIASAAKGMGCVTVAVVTEPFGFEGRQRYRQAAAGLAELREAADTVLVVANDKLLEIVPGRMTMKDAFLVADDVLRQGVIGTSELIVRPGLINVDFADVRQVITKSGEALIGIGTGSGKTR 263          
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: D7FW93_ECTSI (Plastid division protein FtsZ n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW93_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 1.090e-109
Identity = 179/234 (76.50%), Postives = 194/234 (82.91%), Query Frame = 1
Query:   37 EALGSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
            EAL SPV IKVVGVGGGGGNAVDGMITTATR+L GVEF+AMNTDTQAL KSHAEVK+ LGS VTRGLGAGGKPEVG AAA ESLPEIEK LAGAD+VF+TAG+GG                          EPF FEGRQRSRQAA+GLAELR+AADTVLVVAND LLEIVPG+MTM+DAFLVADD+LRQGVIGTSELIVRPGLINVDFADVR++I NSGTALIG+G G+GK R
Sbjct:   95 EALVSPVSIKVVGVGGGGGNAVDGMITTATRKLSGVEFVAMNTDTQALTKSHAEVKIALGSKVTRGLGAGGKPEVGLAAATESLPEIEKTLAGADLVFVTAGMGGGTGTGAAPVIASAAKGMGCVTVAVVTEPFGFEGRQRSRQAAAGLAELREAADTVLVVANDKLLEIVPGRMTMKDAFLVADDVLRQGVIGTSELIVRPGLINVDFADVRQVITNSGTALIGIGMGSGKTR 328          
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A835Z1V3_9STRA (Tubulin/FtsZ, GTPase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V3_9STRA)

HSP 1 Score: 258 bits (659), Expect = 2.910e-81
Identity = 144/229 (62.88%), Postives = 168/229 (73.36%), Query Frame = 1
Query:   52 PVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
            PV IKVVGVGG GGNA++GM++T T+ L GVEF+AMNTD QAL  S A  KL LG + T GLGAGG+PEVG+AAA ES  EI + L GADMVFITAG+GG                           PF+FEGR R+RQAA GLA L K AD +LVVAND LL+I+P +M+M DAFLVADDILRQGVIGTSELI+RPGLINVDFADVR +++NSG+ALIG+GTG G  R
Sbjct:    2 PVLIKVVGVGGAGGNAINGMVST-TQNLQGVEFIAMNTDQQALHTSLAGRKLALGHSSTGGLGAGGRPEVGEAAAKESRQEITELLVGADMVFITAGMGGGTGTGAAPVVAEIAKGLGCLTVGVVTSPFQFEGRSRARQAAVGLAALEKHADALLVVANDRLLQIIPSRMSMTDAFLVADDILRQGVIGTSELILRPGLINVDFADVRSVVQNSGSALIGIGTGVGPTR 229          
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A7S2GNE8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GNE8_9STRA)

HSP 1 Score: 229 bits (583), Expect = 4.560e-70
Identity = 127/240 (52.92%), Postives = 160/240 (66.67%), Query Frame = 1
Query:   19 PEEEAEEALGSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
            P+       GSP  IKV+GVGGGGGNAV+ M+ T    + GVEF  +NTD QAL KS A+  L +G  VTRGLGAGG P VG++AA ES  EI   + GAD+VF+TAG+GG                          +PF FEGR+R +QA   +AEL+   DT++VV+ND LL+IVP    + DAFLVADDILRQGV+G SE+IV+PGLINVDFADVR ++ ++GTAL+G+GTG GK R
Sbjct:   23 PQSSPAMTTGSPCIIKVIGVGGGGGNAVNRMVET---NINGVEFWTVNTDAQALEKSTAKNTLNIGGIVTRGLGAGGNPSVGKSAADESRDEIAAVVRGADLVFVTAGMGGGTGSGAAPVVAEVAKDMGALTVGVVTKPFGFEGRKRMQQANDAIAELQSKVDTLIVVSNDKLLQIVPENTPLADAFLVADDILRQGVVGISEIIVKPGLINVDFADVRAVMGDAGTALMGIGTGKGKTR 259          
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A7S2KCL3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCL3_9STRA)

HSP 1 Score: 226 bits (577), Expect = 3.250e-69
Identity = 125/232 (53.88%), Postives = 158/232 (68.10%), Query Frame = 1
Query:   49 SPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAE--VKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
            SP  IKV+GVGGGG NA+D M+ T   R+ GVEF A+NTD QAL +S A+    L +G+TVTRGLGAGG PEVG+ AA ES  EI    AGAD+VF+T+G+GG                          +PF FEGR+R +QA   +A LRKA DTV++V+N+ LLEI+P    +  +F VADDILRQGV+G SE+I+RPGLINVDFADVR ++  +GTAL+G+G GTGK R
Sbjct:   55 SPCVIKVIGVGGGGSNAIDRMLET---RIGGVEFWAVNTDAQALGRSKAKGAAVLNIGTTVTRGLGAGGNPEVGRLAAEESREEIAAVCAGADLVFVTSGMGGGTGSGAAPVVAEIAKESGALTVAIVTKPFAFEGRRRMKQATDAIARLRKAVDTVIIVSNNKLLEIIPENTPLERSFAVADDILRQGVVGISEIIIRPGLINVDFADVRSVMYEAGTALMGIGMGTGKTR 283          
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A7S2CTQ1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTQ1_9STRA)

HSP 1 Score: 227 bits (579), Expect = 9.660e-69
Identity = 127/230 (55.22%), Postives = 157/230 (68.26%), Query Frame = 1
Query:   49 SPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
            SP  IKVVGVGGGGGNAV+ M+ T    + GVEF A+NTD QAL KS A+  L +G T TRGLGAGG P  G+AAA ES  EI   + G+D+VF+TAG+GG                          +PF FEGR+R +QA   +AEL+   DT++VV+ND LL+IVP    + DAFLVADDILRQGV+G SE+IV+PGLINVDFADVR ++ N+GTAL+G+GTG GK R
Sbjct:   91 SPCIIKVVGVGGGGGNAVNRMVET---NIEGVEFWAVNTDAQALTKSAAKKVLNIGKTSTRGLGAGGNPAQGKAAADESRDEIANVVRGSDLVFVTAGMGGGTGSGAAPVVAEVSKDMGALTVGVVTKPFGFEGRKRMQQANDAIAELQSKVDTLIVVSNDKLLQIVPENTPLADAFLVADDILRQGVVGISEIIVKPGLINVDFADVRTVMGNAGTALMGIGTGKGKTR 317          
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A4D9DAM3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAM3_9STRA)

HSP 1 Score: 228 bits (580), Expect = 1.480e-68
Identity = 124/231 (53.68%), Postives = 158/231 (68.40%), Query Frame = 1
Query:   46 GSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
            GSP RIKV+GVGGGG NAV+ M+T   + + GVEF A+NTD QALAKS    KL +G+ +TRGLGAGGKP VG+ AA ES  EI +A+AGAD+VF+TAG+GG                           PF FEGRQR  QA + + E++   DT++ V+ND LL+IVP    + DAFLVAD+ LR GV+G S++IV+PGLINVDFADVR +++N+GTAL+G G G GK R
Sbjct:   89 GSPCRIKVIGVGGGGSNAVNRMVT---QDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTR 316          
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A7S4A4G9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4G9_9STRA)

HSP 1 Score: 224 bits (570), Expect = 3.180e-67
Identity = 126/230 (54.78%), Postives = 158/230 (68.70%), Query Frame = 1
Query:   49 SPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
            +P  IKVVGVGGGGGNAV+ M+ T     V  +F AMNTD QAL++S A   + +G   TRGLGAGG P+VGQAAA ES  EI  AL+GADMVF+TAG+GG                          +PF FEGR+R++QAA   A L++A DT++V++ND LL+IVP   TM  AFLVADDILRQGV+G SE+I++PGLINVDFADVR I+ ++GTAL+G+G   GK R
Sbjct:  113 APCCIKVVGVGGGGGNAVNRMVETDAGSFV--DFWAMNTDAQALSRSLAGNTMNIGRETTRGLGAGGTPDVGQAAAEESRAEIAAALSGADMVFVTAGMGGGTGSGAAPIVASVAKELGALTVGVVTKPFGFEGRKRAQQAAQATARLQEAVDTLIVISNDRLLQIVPEGTTMEGAFLVADDILRQGVVGISEIIIKPGLINVDFADVRSIMTDAGTALMGIGQSKGKDR 340          
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: A0A7S2XJI3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJI3_9STRA)

HSP 1 Score: 225 bits (574), Expect = 4.430e-67
Identity = 128/236 (54.24%), Postives = 160/236 (67.80%), Query Frame = 1
Query:   34 EEALGSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXX-EPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
            E   GSP  IKV+GVGGGGGNAV+ MI T   R+ GV F AMNTD QAL  S A   L +G +VTRGLGAGG P +G+ AA+E+  E++    GADMVFITAG+GG                           +PF FEGRQR +QA + +AELRK  DT++VV+ND LL IVP    + DAFLVADDILRQGV+G SE+I++ GL+NVDFAD+R +++++GTAL+GVGTG GK R
Sbjct:  110 EGGAGSPCVIKVLGVGGGGGNAVNRMIQT---RIEGVSFWAMNTDAQALRTSLAPNTLNIGRSVTRGLGAGGDPGMGKKAALENAEEVKAVCMGADMVFITAGMGGGTGSGAAPVVAEIAKKECGCLTVGVVTKPFRFEGRQRMKQAEAAIAELRKHVDTLIVVSNDKLLRIVPDNTPVTDAFLVADDILRQGVVGISEIIIKTGLVNVDFADIRAVMKDAGTALMGVGTGVGKSR 342          
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Match: K0T255_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T255_THAOC)

HSP 1 Score: 224 bits (571), Expect = 4.530e-67
Identity = 128/251 (51.00%), Postives = 167/251 (66.53%), Query Frame = 1
Query:    4 PVDYLPEEEAE------EALGSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEFLAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIEKALAGADMVFITAGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXEPFEFEGRQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDILRQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR 738
            P  Y P  E +      E   +P  IKV+GVGGGGGNAV+ MI T   R+ GV F A+NTD QALAKS +   L +G ++TRGLGAGG P+VG+ +A+E+  EI++   G+DMVFITAG+GG                          +PF FEGR+R +QA + + ELRK  DT++VV+ND LL IVP    + DAFLVADDILRQGV+G SE+I++ GL+NVDFADVR +++++GTAL+GVGTG GK R
Sbjct:   75 PSTYNPPIETQGGAIMPEGGANPCVIKVLGVGGGGGNAVNRMIQT---RIDGVSFWAVNTDAQALAKSLSPNVLNIGRSLTRGLGAGGVPDVGKESALENTAEIKEICRGSDMVFITAGMGGGTGSGAGPIVAEIARDEGCLTVGVVTKPFAFEGRKRMKQAEAAIVELRKHVDTLIVVSNDKLLRIVPENTPVTDAFLVADDILRQGVVGISEIIIKTGLVNVDFADVRAVMKDAGTALMGVGTGAGKTR 322          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1214.1851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L9R7_9PHAE7.190e-11073.20Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FW93_ECTSI1.090e-10976.50Plastid division protein FtsZ n=1 Tax=Ectocarpus s... [more]
A0A835Z1V3_9STRA2.910e-8162.88Tubulin/FtsZ, GTPase domain-containing protein n=1... [more]
A0A7S2GNE8_9STRA4.560e-7052.92Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2KCL3_9STRA3.250e-6953.88Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2CTQ1_9STRA9.660e-6955.22Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A4D9DAM3_9STRA1.480e-6853.68Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4A4G9_9STRA3.180e-6754.78Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2XJI3_9STRA4.430e-6754.24Hypothetical protein n=1 Tax=Attheya septentrional... [more]
K0T255_THAOC4.530e-6751.00Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1214contigH-canaliculatus_F_contig1214:421..2826 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.9
Seed ortholog evalue1.1e-56
Seed eggNOG ortholog159749.K0T255
KEGG koko:K03531
KEGG Pathwayko04112,map04112
EggNOG free text desc.FtsZ family, C-terminal domain
EggNOG OGs2QRFN@2759,2XB9F@2836,COG0206@1
COG Functional cat.Z
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02048,ko03036,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionplastid division protein FtsZ
Ec32 orthologEc-01_003840.1
Exons4
Model size738
Cds size738
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1214.1851.1prot_H-canaliculatus_F_contig1214.1851.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1214 421..2826 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928927.269822-CDS-H-canaliculatus_F_contig1214:420..5491622928927.269822-CDS-H-canaliculatus_F_contig1214:420..549Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1214 421..549 -
1696845615.562509-CDS-H-canaliculatus_F_contig1214:420..5491696845615.562509-CDS-H-canaliculatus_F_contig1214:420..549Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1214 421..549 -
1622928927.6518297-CDS-H-canaliculatus_F_contig1214:1187..14561622928927.6518297-CDS-H-canaliculatus_F_contig1214:1187..1456Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1214 1188..1456 -
1696845615.578425-CDS-H-canaliculatus_F_contig1214:1187..14561696845615.578425-CDS-H-canaliculatus_F_contig1214:1187..1456Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1214 1188..1456 -
1622928927.665753-CDS-H-canaliculatus_F_contig1214:1899..20411622928927.665753-CDS-H-canaliculatus_F_contig1214:1899..2041Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1214 1900..2041 -
1696845615.5947218-CDS-H-canaliculatus_F_contig1214:1899..20411696845615.5947218-CDS-H-canaliculatus_F_contig1214:1899..2041Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1214 1900..2041 -
1622928927.6810281-CDS-H-canaliculatus_F_contig1214:2628..28261622928927.6810281-CDS-H-canaliculatus_F_contig1214:2628..2826Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1214 2629..2826 -
1696845615.6089485-CDS-H-canaliculatus_F_contig1214:2628..28261696845615.6089485-CDS-H-canaliculatus_F_contig1214:2628..2826Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1214 2629..2826 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1214.1851.1

>prot_H-canaliculatus_F_contig1214.1851.1 ID=prot_H-canaliculatus_F_contig1214.1851.1|Name=mRNA_H-canaliculatus_F_contig1214.1851.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=246bp
LPVDYLPEEEAEEALGSPVRIKVVGVGGGGGNAVDGMITTATRRLVGVEF
LAMNTDTQALAKSHAEVKLTLGSTVTRGLGAGGKPEVGQAAAVESLPEIE
KALAGADMVFITAGLGGGTGTGAAPVIAAAARGMGCVTVAVVTEPFEFEG
RQRSRQAASGLAELRKAADTVLVVANDNLLEIVPGKMTMRDAFLVADDIL
RQGVIGTSELIVRPGLINVDFADVREIIRNSGTALIGVGTGTGKVR
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mRNA from alignment at H-canaliculatus_F_contig1214:421..2826-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1214.1851.1 ID=mRNA_H-canaliculatus_F_contig1214.1851.1|Name=mRNA_H-canaliculatus_F_contig1214.1851.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2406bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1214:421..2826- (Hapterophycus canaliculatus Oshoro5f female)
TTGCCTGTGGACTACTTGCCGGAGGAAGAAGCTGAGGAAGCGTTGGGGTC ACCGGTGCGCATCAAGGTCGTCGGCGTCGGCGGGGGAGGGGGCAACGCCG TGGACGGGATGATTACCACCGCCACGCGGAGGCTGGTTGGGGTGGAGTTT TTGGCGATGAACACGGACACACAGGCTTTGGCCAAATCGCACGCAGAGGT ACGCGTTTCGACGGTGTTCGGGGGGTGTTCGTGGAGGGGGGCGGACAAAG CGCGGAGAGCGAGGCGTTTTGGTGCGGACATGGGGGCCAGCTCCATCAAT GCTATGGTGGTCGAAAGGAGAAATAGAAGCCAAGAGAGCCTTGTTCCTCT GAACACTGAAAGCGAGGGTCGCAATTTGAAATTTGAGACCCTCGTTCACG TCAAGTCTCGTCCTGCATGCAGCCAGCCAGCGACCAGCTCTTCGTATGAC TTCCCTCCGGGCTTTGCGTCGTGTTGTTGAGTTGATGGGATGGCATAATT GGTTGACTTTTGCCGTGTCCGATCCTTGCCTTCGCACGCATCAGCTTTAT TTGAGGTGTTTCCCGATTGTAACAAAGCAAGAAGGTCTTTGATCCGATTG ATACGCCGTCAAGACACCACTCTCCGCCGCTGCAGCTGTTGCGAAACACA TCCTCCACCGCTGGCCAGCCTGCTTTGTTGCCCCCCTCCCACCAGGCACG CTAAGAAGCAGGAAGAATCAGATTTCCCAGGCTGAGTGGGCTCTGTCGTT GTTCATTCCGCACCGGCAAACTCGACCCCTCCCAGGTCAAGCTCACGCTC GGATCGACCGTTACACGAGGCCTCGGTGCCGGGGGAAAACCCGAGGTGGG GCAGGCTGCCGCCGTGGAGTCTCTGCCGGAGATCGAGAAAGCACTGGCGG GTGCCGATATGGTGTTCATCACGGCGGGTGAGGACCTTCATTTTCTCCTG CGCATGCGGATTCTCGTTGCACACTTCGGAAAGCGGAGGCAGTCGAAGGA GAGCGACGCTCCTCCGAGCACTCTGTCTCTGAGGGCGAATGTAGAGGGAA ATGTGGCAAAATGCTTACATGGGAGTGCAGCCCCATGGTGAGAGCATGGA ACGCCTTCCAAAAAATCAAACGTCCAAGGGTCGAAATGATGAAAACCCCG TCTTGCTTCAGTCGCGCGGGAAATGCAGAGCACCACGGAAATCCAATCCT GAATGTAGGATCTACAGATTACTTGCACTGGTCACGCGTGCTTCACGCGT GTTGATGTGGGAACCACCAACTGACGATCTTTCCGAAAGTCGCTATTTCT TTCGCCTCTTTTATCCGCCCCTTCCCTTCCCTCCCCTCCCCTCCCCTCTC CCGACTTGATGCTCTTAAAGGTTTGGGGGGAGGTACCGGAACAGGCGCAG CGCCGGTGATCGCGGCCGCAGCGAGAGGCATGGGGTGCGTTACCGTAGCC GTTGTGACCGAGCCTTTCGAGTTCGAGGGGCGGCAGAGGTCCAGGCAGGC GGCGTCCGGGTTGGCCGAGCTCCGAAAGGCCGCCGATACGGTGCTTGTGG TGGCGAACGACAACCTACTGGAGATCGTGCCGGGCAAGATGACAATGCGT GACGCCTTCCTCGTAGCGGACGATATCCTTCGGCAGGGGGTGAGTTCCGT GTTGGTAGTTTGGTTGTGGGTTACGGTGCGTTTCCAGAGGAGGAGATAAG GCAAGTGACCAACGGATGTGGACAAGAGGGGGGCCGGTCGGATTGTCGCC GTTCTGTTCTCTGAGTGTCTGAACGCCGACACCTTCATACAGACCTGGAA GGGCTAGTTATTTGTTCTTTTGACCGGGATGATTCATCGCACAATTGCAC AGCGTTGGCACGTGGGGATGGCACCGTGATTGACCTGGTGAAACCTGACC AGGCTTTCGGTGGCGTTTACTCTAGCAGGCATTTGGTGAACAACAACGGG TGATTTGCCGTGGAGTCAGTGAAACGTTGTCGTCGGCGTCTTTTGTAGAC GGCAGCGGACGCCACGTGGAAACTCGATAGTCCCTCCCACGCCCAGATAG CCCCCTCCTGCCTCCTCGACGGGCTTCGCCTGGCTTCGAGAACAGCACTT CCATAGCATCGATGTCGCCCATACGGATGTGGTAGCTCTCAATACCGCTG ACCCTTGGCCACGGGGCAGCAGAGGCTCACAGATGTAAGACGCACGTTTC ATTTTTCGTCGACTTTATCGGTGCGATTGGCTCCCGGTCGGCGGCGTGGC GAACGACATCGTCTTTGTGTTTGGCAGGTGATCGGTACCTCGGAGCTGAT CGTCCGACCGGGTCTGATCAACGTGGACTTCGCGGACGTGCGCGAAATCA TCAGAAACTCGGGCACGGCTCTCATTGGCGTAGGGACGGGCACGGGAAAG GTACGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1214:421..2826-

>mRNA_H-canaliculatus_F_contig1214.1851.1 ID=mRNA_H-canaliculatus_F_contig1214.1851.1|Name=mRNA_H-canaliculatus_F_contig1214.1851.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1476bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1214:421..2826- (Hapterophycus canaliculatus Oshoro5f female)
TTGCCTGTGGACTACTTGCCGGAGGAAGAAGCTGAGGAAGCGTTGGGGTC
ACCGGTGCGCATCAAGGTCGTCGGCGTCGGCGGGGGAGGGGGCAACGCCG
TGGACGGGATGATTACCACCGCCACGCGGAGGCTGGTTGGGGTGGAGTTT
TTGGCGATGAACACGGACACACAGGCTTTGGCCAAATCGCACGCAGAGTT
GCCTGTGGACTACTTGCCGGAGGAAGAAGCTGAGGAAGCGTTGGGGTCAC
CGGTGCGCATCAAGGTCGTCGGCGTCGGCGGGGGAGGGGGCAACGCCGTG
GACGGGATGATTACCACCGCCACGCGGAGGCTGGTTGGGGTGGAGTTTTT
GGCGATGAACACGGACACACAGGCTTTGGCCAAATCGCACGCAGAGGTCA
AGCTCACGCTCGGATCGACCGTTACACGAGGCCTCGGTGCCGGGGGAAAA
CCCGAGGTGGGGCAGGCTGCCGCCGTGGAGTCTCTGCCGGAGATCGAGAA
AGCACTGGCGGGTGCCGATATGGTGTTCATCACGGCGGGTCAAGCTCACG
CTCGGATCGACCGTTACACGAGGCCTCGGTGCCGGGGGAAAACCCGAGGT
GGGGCAGGCTGCCGCCGTGGAGTCTCTGCCGGAGATCGAGAAAGCACTGG
CGGGTGCCGATATGGTGTTCATCACGGCGGGTTTGGGGGGAGGTACCGGA
ACAGGCGCAGCGCCGGTGATCGCGGCCGCAGCGAGAGGCATGGGGTGCGT
TACCGTAGCCGTTGTGACCGAGCCTTTCGAGTTCGAGGGGCGGCAGAGGT
CCAGGCAGGCGGCGTCCGGGTTGGCCGAGCTCCGAAAGGCCGCCGATACG
GTGCTTGTGGTGGCGAACGACAACCTACTGGAGATCGTGCCGGGCAAGAT
GACAATGCGTGACGCCTTCCTCGTAGCGGACGATATCCTTCGGCAGGGGG
TTTGGGGGGAGGTACCGGAACAGGCGCAGCGCCGGTGATCGCGGCCGCAG
CGAGAGGCATGGGGTGCGTTACCGTAGCCGTTGTGACCGAGCCTTTCGAG
TTCGAGGGGCGGCAGAGGTCCAGGCAGGCGGCGTCCGGGTTGGCCGAGCT
CCGAAAGGCCGCCGATACGGTGCTTGTGGTGGCGAACGACAACCTACTGG
AGATCGTGCCGGGCAAGATGACAATGCGTGACGCCTTCCTCGTAGCGGAC
GATATCCTTCGGCAGGGGGTGATCGGTACCTCGGAGCTGATCGTCCGACC
GGGTCTGATCAACGTGGACTTCGCGGACGTGCGCGAAATCATCAGAAACT
CGGGCACGGCTCTCATTGGCGTAGGGACGGGCACGGGAAAGGTACGAGTG
ATCGGTACCTCGGAGCTGATCGTCCGACCGGGTCTGATCAACGTGGACTT
CGCGGACGTGCGCGAAATCATCAGAAACTCGGGCACGGCTCTCATTGGCG
TAGGGACGGGCACGGGAAAGGTACGA
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