mRNA_H-canaliculatus_F_contig1213.1848.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1213.1848.1
Unique NamemRNA_H-canaliculatus_F_contig1213.1848.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1213.1848.1 vs. uniprot
Match: D7FQI5_ECTSI (PseudoU_synth_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQI5_ECTSI)

HSP 1 Score: 942 bits (2436), Expect = 0.000e+0
Identity = 536/776 (69.07%), Postives = 591/776 (76.16%), Query Frame = 1
Query:  247 PLTTCTFCGEEFPTRSSMFRHLERASDTCPAPRQDSGQKVLLLVGYDSCSMI--EAGLGRATAPPTQLLR------------GGVIGGEGAAAFVLKAMGVGVERGTEGTAVSGGDNSSRYCFSRPKGGFSQASSVASRTCPLLAQEAEVSATADTICLRAPTTIPLEGLRGWLDETNDAL-RRDENGKGAVQLLGRMAVPTTFHAEIHAKRRRYEYLLPAWLLDETADGPWPGPPRGQENIIPLLRRLRRMGLLPFGHCNGDHDGTRRRCPLWHNFSASALPHSPSSQRRLYRFFAMEVIQSSP----GGDADA--VDYVVLSVNADAFMSQQVRGMVALAVAGVRGLISADDIAACIFPAAEDIADLLPVPLAPAAPCSLAEVGYSTWQMRLGVGGGGVCMSPGAQQRGCLPLEGWSDEKTRSEGAKFRRRVLESAAKWWENHHGGVSWLRDVLQPGALQLGREVEASSRRTLASVGGKMVGGNEDECRGNGEGDVGGSRDGSSDSKRAGA----APLCSEELSSLSAAPAAFAKVLRLLREADALGDWPMSTVSRSLVILGERGGGRDVGGGSDAGRTEITE--GC----DSDGSTWIGAAEPA---TLGEESRQPXXXXXXXXXXXXXXXXXXXXXXXXGSFTLGAFPPPCPPPRGNRLFPELARAAFELEAVLLSDRPPSTTIAVNRNAQFKPHVDSGSGAGQSRSLIVGLGDYTGGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFAGERYSLVWFTPKGCEGITGDARF 2472
            P+TTC+FC E FPTRS+MFRHLER   TCPAPR+D G+KVLL+VGYDS  M   + G G  T P +                   +GG  AA+ VLKAMG+ VER  +           +   SRP GGFSQASSV SRTCPLLAQE EVSATADTICLRAPTT+P EG+R WLD+TN AL   D N + A++LLGRMAVP+TFHAEIHAKRRRYEYLLPAW+LDETA+GPW GPPRGQEN+IPLLRRLR  GL PFGHCNG+HDGTRRRCPLWHNFSASALPHSPSS RRL+RF+AMEVIQSSP    GGDA A   DYV LS+N DAFMSQQVRGMVALAVAG RGLISA+ IAA I P  ++  DLLPVPLAPAAPCSLAEVGYS WQMRLGVGG GVCMSPGA+QRGC PLEGWSDE +RSEGA+FRR+VL+SAA+WWE   GGV WL+DVLQPGA++LGREV+ S  R      G + G   +E RG  E D  G R GS D  R GA    APL +E+LSSL  AP  +AKVL LLREA A G WP ST SRSLVI GERG   D    S  GR++ T+  GC    DSD +     A PA   T+GEE+           XXXXXXXXXXXXXXXX SFTLGAFPPPCPPPRGNRLF ELARAAFELEA LL +RPPSTTIAVNRNA+FKPHVDSGSGAGQSRSLIVGLGDY  GELVVEGEE DIRYRPLEFNGWTQRHWTRPF+GERYSLVWFTPKGCEGI+GDARF
Sbjct:   31 PVTTCSFCSERFPTRSAMFRHLERPCATCPAPREDYGEKVLLVVGYDSRLMAGDKGGEGAVTPPTSDTYNMPTPPVGTSSGTAAAVGGASAASSVLKAMGIEVERRRDXXXXXXXXXXXQSYCSRP-GGFSQASSVGSRTCPLLAQEEEVSATADTICLRAPTTVPQEGIRKWLDDTNAALDNSDGNAREAIRLLGRMAVPSTFHAEIHAKRRRYEYLLPAWMLDETAEGPWEGPPRGQENLIPLLRRLRARGLRPFGHCNGEHDGTRRRCPLWHNFSASALPHSPSSLRRLFRFYAMEVIQSSPSSSQGGDAGASGADYVCLSINGDAFMSQQVRGMVALAVAGARGLISAEGIAATIDPTRQE--DLLPVPLAPAAPCSLAEVGYSGWQMRLGVGGQGVCMSPGAEQRGCRPLEGWSDEASRSEGARFRRQVLDSAARWWEERDGGVGWLKDVLQPGAVKLGREVQVSDMRA-----GDLEGDRSNEGRG--EEDGCGGRSGSRDESRRGAGADGAPLSAEDLSSLEEAPVLYAKVLGLLREASASGQWPTSTASRSLVIFGERGDRADEMC-SGTGRSKQTDLAGCAKGRDSDKTALAEEAPPAMARTVGEENASAATEPDGQQXXXXXXXXXXXXXXXXXSFTLGAFPPPCPPPRGNRLFAELARAAFELEAALLPERPPSTTIAVNRNARFKPHVDSGSGAGQSRSLIVGLGDYVRGELVVEGEEADIRYRPLEFNGWTQRHWTRPFSGERYSLVWFTPKGCEGISGDARF 795          
BLAST of mRNA_H-canaliculatus_F_contig1213.1848.1 vs. uniprot
Match: A0A835YK11_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK11_9STRA)

HSP 1 Score: 271 bits (693), Expect = 4.510e-76
Identity = 279/815 (34.23%), Postives = 350/815 (42.94%), Query Frame = 1
Query:  259 CTFCGEEFPTRSSMFRHLERASDTCPA---------PRQDSGQKVLLLVGYDSCSMIEAGLGRATAPPTQLLRGGVIGGEGAAAFVLKAMGVGVERGTEGTAVSGGDNSSRYCFSRPKGGFSQASSVASRTCPLLAQEAEVSATADTICLRAPTTIPLEGLRGWLDETNDALRRDENGKGAVQLLGRMAVPTTFHAEIHAKRRRYEYLLPAWLLDETADGPWPGPPR---------GQENIIPLLRRLRRMGLLPFGHCNGDHDGTRRRCPLWHNFSASALPHSPSSQRRLYRFFAMEVIQSSPGGDADAVDYVVLSVNADAFMSQQVRGMVALAVAGVRGLISADDIAACIFPAAEDIADLLPVPLAPAAPCSLAEVGYSTWQM-RLGVG---------------------------GGGVCMSPGAQQRGCLPLEGWSDEKTRSEGAKFRRRVLESAAKWWENHHGGVSWLRDVLQPGALQLGREVEA-SSRRTLASVGGKMVGGNEDECRGNGEGDVGGSRDGSSDSKRAGAAPLCSEELSSLSAAPAAFAKVLRLLREADALGDWPMSTVSRSLVILGERGGGRDVGGGSDAGRTEITEGCDSDGSTWIGAAEPATLGEESR----------------------------QPXXXXXXXXXXXXXXXXXXXXXXXXGSFTLGAFPPPCPPPRGNRLFPELARAAFELEAVLLSDRPPSTTIAVNRNAQFKPHVDSGSGAGQSRSLIVGLGDYTGGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFAGERYSLVWFTPKGCE-GITGDARFL 2475
            C  C + F TR+++FRHL   +  C A              G+K+ LL GY   S   A                          V    G          A++G         + P  G + ASS  +     LAQE EV+A AD +            LRG L + N  L R       V++LG M V   FHAE  A+RRRY+YLLP  LL   AD                 G+ ++  +++R++ +    +G    D  G R  C   HNF AS  P  P + RRL+RF   +   ++  G A     VVLSV  +AF+SQQ R MV L +A  RG +  D I A +   A+    +   P APA    LAEVGYS     + G+                                                                       W E  H G  W+   LQ     L   ++     + LA  G                                    L   E ++L  AP  +A+VLRLLREADA G WP S+  R  VI     G     G  D    ++    ++     +  A+ AT G  +                               XXXXXXXXXXXXXXXXXXXXX   GSF++G  P  C  PRGN LFPEL RAAFELE VL+ +R PS+TIA+NR+AQF+PH DSG+G+GQS SLIVGLGDY GGELVVEG E DIRYRPLEFNGWTQRHWT PF GERYSLVWFTPK        ++RFL
Sbjct:    5 CKLCAQPFDTRNALFRHLLDLNTECGAFCASKGMKSTATTRGRKIALLFGYHGVSSDAA--------------------------VAAIWG----------AITGS--------TEPPDGLTAASSWIASNNRALAQEPEVAAVADVMTFNM--------LRGSLSDVNARLPR------GVRVLGHMEVGVDFHAERMARRRRYDYLLPLSLLRGAADSGGSSAHSSDQQQRAECGEGDVAAVMQRIKPLLRRFYG--GTDQRGRRVCC---HNFCASTAPTEPIATRRLFRFKHTD--SAALRGRA----CVVLSVTCNAFLSQQARRMVGLLIACARGALPPDAIDAALD--AQYTEHMAVAPAAPACGVHLAEVGYSPAHSDKFGLSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEEEEHWGSKWVDGPLQESLPALRAFLQRWRDSKQLAQSGPPQP-----------------------------PLSLSPAEAAALPPAPEVYARVLRLLREADASGLWPDSSKGRQTVIAN---GAAAAVGEEDESEEQVP--AEAAAVELLVPAQLATSGPGATVAAGISTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGGSFSVGRMPATCAVPRGNDLFPELMRAAFELERVLMPNRTPSSTIAINRHAQFRPHKDSGAGSGQSLSLIVGLGDYAGGELVVEGVECDIRYRPLEFNGWTQRHWTLPFRGERYSLVWFTPKSAALTYRNNSRFL 714          
BLAST of mRNA_H-canaliculatus_F_contig1213.1848.1 vs. uniprot
Match: A0A1Z5JI73_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JI73_FISSO)

HSP 1 Score: 270 bits (689), Expect = 1.760e-75
Identity = 253/824 (30.70%), Postives = 350/824 (42.48%), Query Frame = 1
Query:  256 TCTFCGEEFPTRSSMFRHLERASDTCPAPRQDSG----------QKVLLLVGYDSCSMIEAGLGRATAPPTQLLRGGVIGGEGAAAFVLKAMGVGVERGTEGTAVSGGDNSSRYCFSRPKGGFSQASSVASRTCPLLAQEAEVSATADTICLRAPTTIPLEGLRGWLDETNDALRRDENGKGAVQLLGRMAVPT---TFHAEIHAKRRRYEYLLPAWLL----------DETADGPWPGPPRGQENI----------------IPLLRRLRRMGLLPFGHCNGDHDGTRRRCPL----------------------------WHNFSASALPHSPSSQRRLYRFFAMEVIQSSPGGDADAVDYVVLSVNADAFMSQQVRGMVALAVAGVRGLISADDIAACIFPAAEDIADLLPVPLAPAAPCSLAEVGYSTWQMRLGVGGGGVCMSPGAQQRGCLPLEGWSDEKTRSEGAKFRRRVLESAAKWWENHHGGVS----------WLRDVLQPGALQLGREVEASSRRTLASVGGKMVGGNEDECRGNGEGDVGGSRDGSSDSKRAGAAPLCSEELSSLS----AAPAAFAKVLRLLREADALGDWPMSTVSRSLVILGERGGGRDVGGGSDAGRTEITEGCDSDGSTWIGAAEPATLGEESRQPXXXXXXXXXXXXXXXXXXXXXXXXGSFTLGAFPPP-CPPPRGNRLFPELARAAFELEAVLLSDRPPSTTIAVNRNAQFKPHVDSGSGAGQSRSLIVGLGDYTGGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFAGERYSLVWFTPKGCEGITGDARFLCR 2481
            TC  CGEEFP+RS++FRHL+  S  C +  +  G           KVLLL GY      EA                       A  +LK +        +G  V     +  Y             ++  RT  +   E      ++ +  R P+   LE +  W+D  N  L  +      + L+GR  +     TF+AEI    RR EY+LP   L          DE  D   P      E +                  L R+++ +          +HD + ++                               +HNF+ S + H   + RR+ R +    I+     D +   ++VLS+  D F+  QV  ++ + +A  RGL+   D+  C+F   E    L+P P AP+      E  Y  W+ ++        +SP    R     EGW+D  T      ++  V E  A+ W    GG            W   VL+P + +  +++E   +   AS+   +V                          R  AA + SE + SL+      PA F KVLR LREADA G WP +T  R +V++            +D   T+     D   ++   A   A   +  R                          GSF++GA P   C  P+GN LFPEL +AAFELE VL  DR PS+TIA+NRNAQF+PH DSG+GAGQS SLIVGLG Y GGELVVEGE+ DIRY+ +EFNGWTQRHWT PF GER+SLVWFTPKGCEG+ G    LCR
Sbjct:    5 TCHGCGEEFPSRSAIFRHLKETSGQCLSKEEYQGYLQYLQEQDRHKVLLLYGYCGLEGTEA-----------------------AQKLLKIV--------QGEDVKPDKINRSYA------------NIGRRTQLVKQDEGTGGVISEVLATRLPSI--LEPVDNWIDRMNTQLEPE-----GIYLIGRHEMKGKGGTFNAEIDVTHRRVEYMLPLDFLYCSNIENMSRDEFFDT-LPDFTETSEYVSKVGRDYPTLATVKYLFGLKRKMQSLTTQIIPMDADEHDSSAKKMEREQQSKRPKSQQKSKNGNKPKTNLLKRRRFHNFTPSCMAHEYVAYRRMDRVYHRATIRF----DGERRPFLVLSLTGDLFLHGQVCRVIGVFLALARGLVD-QDMVECLFD--EKYGSLIPTPAAPSMGMIAGEAYYVNWEGKVK-----AVLSPRIADRFS---EGWNDANTIKRYEYWKDLVRERVARAWLT--GGFDEDGRLLAEREWTETVLEPWSQRANQQLEEYRQWKQASL---VV-------------------------SRKSAAEV-SELIPSLNLVDPTVPAVFEKVLRCLREADASGLWPSTTPKRQMVMISSL---------TDPNATDE----DFLPNSLADAHGKAKNNKGQRS------------SAYIFAEGEGGASGSFSVGAMPGDRCIQPKGNSLFPELMKAAFELEMVLRPDREPSSTIAINRNAQFRPHTDSGAGAGQSTSLIVGLGTYAGGELVVEGEKKDIRYKAVEFNGWTQRHWTMPFKGERFSLVWFTPKGCEGVHGID--LCR 704          
BLAST of mRNA_H-canaliculatus_F_contig1213.1848.1 vs. uniprot
Match: B7FNZ7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FNZ7_PHATC)

HSP 1 Score: 268 bits (686), Expect = 2.010e-74
Identity = 259/868 (29.84%), Postives = 374/868 (43.09%), Query Frame = 1
Query:  253 TTCTFCGEEFPTRSSMFRHLERASDTCPAPRQ----------DSGQKVLLLVGYDSCSMIEAGLGRATAPPTQLLRGGVIGGEGAAAFVLKAMGVGVERGTEGTAVSGG-----DNSSRYCFSRPKGGFSQASSVASRTCPLLAQEAEVSATADTICLRAPTTIPLEGLRGWLDETNDALRRD-ENGKGAVQLLGRMAVPTT-FHAEIHAKRRRYEYLLPAWLL------------------------------------------DETADGPWPGPP--RGQENIIPLLRRL--------------------RRMGLLPFGHCNG---DHDGTRR---------------------------RCPLWHNFSASALPHSPSSQRRLYRFF---AMEVIQSSPG-----GDADAV-DYVVLSVNADAFMSQQVRGMVALAVAGVRGLISADDIAACIFPAAEDIADLLPVPLAPAAPCSLAEVGYSTWQMRLGVGGGGVCMSPGAQQRGCLPLEGWSDEKTRSEGAKFRRRVLESAAKWW----ENHHGGV----SWLRDVLQPGALQLGREVEASSRRTLA---SVGGKMVGGNEDECRGNGEGDVGGSRDGSSDSKRAGAAPLCSEELSSLSAAPAAFAKVLRLLREADALGDWPMSTVSRSLVILGERGGGRDVGGGSDAGRTEITEGCDSDGSTWIGAAEPATLGEESRQPXXXXXXXXXXXXXXXXXXXXXXXXGSFTLGAFP-PPCPPPRGNRLFPELARAAFELEAVLLSDRPPSTTIAVNRNAQFKPHVDSGSGAGQSRSLIVGLGDYTGGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFAGERYSLVWFTPKGCEGITG 2460
            T C  CG+E  +R+++FRHL+     C    Q             +K ++L GY +         +   PP  +L  G      AA  +L+     +E+ +    ++ G     D +S    +R  G  ++ +SV       L Q++   A  + +C R P     +    W DE N  L    ++  G + + GR  +  + F+AE+    RR EYLLPA  L                                          D + D   P P   R   N+  L++RL                     R       H N    +  G RR                           R   +HNF+ S L H   + RRL R +    +   QS+ G      +A+    ++VLS++ D F++ QV  +V L +A  +G+I  +D   C+F   E    L+  P AP       E  Y + +        G C +    ++  +  +GW+D+KT  +   +++RV   AA  W    E+  G +     W ++VL+P A++   +++   +  ++   +V     GG E                      RA   P+ S E    +A P+ F KVLR LR+AD  G WP +T  R LV++     G+             +E CD   + +   A PA+L     +                         GSF++GA P   C  P+GN LFPEL RAAFELE  L  +R PS+TIA+NRNAQF+PH DSG+GAGQS SLIVGLG Y+GGELVVEGE+ DIRYR LEFNGW QRHWT PF GER+SLVWFTPKGCEG+ G
Sbjct:    3 TCCEGCGKECGSRNAIFRHLKDNKGECLDKEQYQDFLRYVQNQKREKTMVLYGYLTA--------KDEVPPEAILHNG----HDAANLLLQI----IEQHSSSFNITPGVPSQTDENSNTKLTRSYGNTARNTSV-------LEQDSYTGAITEALCARLPPIGVSDST--WSDEINKILDEQLQSTPGQMMVFGRRKMTISKFNAEMDVTHRRVEYLLPADFLFAPNATPNDNRSDFLSSLPSFTDGSYRDRSEGQVNFQGAPSYDSSNDRRRPDPETLRYLHNLKKLMQRLTTHIEKLDTNDKAAVLEKDFNRQKRHKNRHANSLKKEAKGERRLEKSQNTLVQPETKRPKKEDKKGQNVLRRKRYHNFTPSVLAHDFLAYRRLDRIYHRATLRFSQSTKGVLTLSQNAETKRPFLVLSLSGDIFLTGQVCRIVGLFIALSKGVID-EDFCDCVFD--EAYPHLVSTPAAPTTGMYAGEAYYMSME--------GKCKAVLTPRKSTIFQDGWNDDKTLQKVYSWQQRVRADAAAAWMALGEDKEGRLLAERDWTKEVLEPWAIRAKEQLKEYRQWKMSKKTNVLHATTGGAE---------------------TRALEPPIASIE----TAIPSLFEKVLRYLRDADKSGFWPSTTPKRQLVMVSTVVEGK-------------SESCD---NPFESGAMPASLSVAHMK---ARSNKIDKSSAYIYVEGEGGASGSFSVGAMPGEACTQPKGNELFPELMRAAFELEIALCPNREPSSTIAINRNAQFRPHTDSGAGAGQSSSLIVGLGSYSGGELVVEGEQKDIRYRALEFNGWKQRHWTMPFHGERFSLVWFTPKGCEGVRG 790          
BLAST of mRNA_H-canaliculatus_F_contig1213.1848.1 vs. uniprot
Match: A0A7S2Y9F9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y9F9_9STRA)

HSP 1 Score: 242 bits (617), Expect = 5.980e-67
Identity = 193/536 (36.01%), Postives = 255/536 (47.57%), Query Frame = 1
Query:  982 NGDHDGT---RRRCPLWHNFSASALPHSPSSQRRLYRFFAMEVIQSSPGGDADAV----------------------DYVVLSVNADAFMSQQVRGMVALAVAGVRGLISADDIAACIFPAAEDIADLLPVPLAPAAPCSLAEVGYSTWQMRLGVGGGGVCMSPGAQQRGCLPLEGWSDEKTRSEGAKFRRRVLESAAKWW-------ENHHGGV----SWLRDVLQPGALQLGREVEASSRRTLASVGGKMVGGNEDECRGNGEGDVGGSRDGSSDSKRAGAAPLCSEELSSLSA----APAAFAKVLRLLREADALGDWPMSTVSRSLVILGERGGGRDVGGGSDAGRTEITEGCDSDGST-WIGAAEPATLGEESRQPXXXXXXXXXXXXXXXXXXXXXXXXGSFTLGAFP-PPCPP-PRGNRLFPELARAAFELEAVLLSDRPPSTTIAVNRNAQFKPHVDSGSGAGQSRSLIVGLGDYTGGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFAGERYSLVWFTPKGCEGITG 2460
            NGD   T   RRR   +HNF+ S + H   S RRL R      ++  P  +A                          ++VLS++AD F++ QV  +V L VA  RGLI  D +  C+F   E+   L+P P AP       +  Y +W+     G     +SP    R   P  GW+D  T      ++ RV + A + W       +  +G +     W   +L P A +  + ++    R   S+ GK                        SDS     + + S  + S S+     P  F +VL LL+EAD  G WP +T  R LV++        V  G D          D D S  +    +P +L     +                         GSF++G+ P   CP  P+ N LFP+L +AAFELE  L  DR PS+TIA+NRNAQF+PH DSGSGAGQS SLIVG+G Y+GGELVVEGE+ DIRY+ +EFNGWTQRHWT PF GERYSLVWFTPKGCEGI G
Sbjct:   54 NGDTKTTQVLRRR--RYHNFTPSVMAHEYLSYRRLDRVHHRATLRFDPRDNATTACFSENTSVHNPQQQHSNSQQQRPFMVLSLSADLFLTGQVPRVVGLFVALARGLIDKDFVE-CVFD--ENYLHLVPTPPAPLIGMYSKDAFYMSWE-----GKAKSVLSPRQTDR--YP-GGWNDTATLQRVEAWQARVRQHAVQQWNAKGDNQDASNGRLVLEQEWTESILLPWAEKARKHLQ--DYRQWKSLQGKTP---------------------LSDSS---ISQMVSNNIISNSSLDPTVPKVFQRVLSLLQEADKSGSWPSTTPKRQLVMVSNH-----VDSGKDG---------DKDTSNPFQSYQQPKSLSVAHMK---AKSNRDIRSSAYEFEEGQGGASGSFSVGSMPGEQCPQQPKANSLFPQLMKAAFELEVALCPDREPSSTIAINRNAQFRPHTDSGSGAGQSTSLIVGIGTYSGGELVVEGEQKDIRYKAIEFNGWTQRHWTMPFVGERYSLVWFTPKGCEGIRG 533          
BLAST of mRNA_H-canaliculatus_F_contig1213.1848.1 vs. uniprot
Match: B8C5S1_THAPS (PseudoU_synth_1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5S1_THAPS)

HSP 1 Score: 241 bits (616), Expect = 1.010e-64
Identity = 181/514 (35.21%), Postives = 247/514 (48.05%), Query Frame = 1
Query: 1021 WHNFSASALPHSPSSQRRLYRFF--------------AMEVIQSSPGGDADAV----DYVVLSVNADAFMSQQVRGMVALAVAGVRGLISADDIAACIFPAAEDIADLLPVPLAPAAPCSLAEVGYSTWQMRLGVGGGGVCMSPGAQQRGCLPLE-GWSDEKTRSEGAKFRRRVLESAAKWW-------------ENHHGGVSWLRDVLQPGALQLGREVEASSRRTLASVGGKMVGGNEDECRGNGEGDVGGSRDGSSDSKRAGAAPLCSEELSSLSAAPAAFAKVLRLLREADALGDWPMSTVSRSLVILGERGGGRDVGGGSDAGRTEITEG-CDSDGSTWIGAAEPATLGEESRQPXXXXXXXXXXXXXXXXXXXXXXXXGSFTLGAFPP-PCPPPRGNRLFPELARAAFELEAVLLSDRPPSTTIAVNRNAQFKPHVDSGSGAGQSRSLIVGLGDYTGGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFAGERYSLVWFTPKGCEGITG 2460
            +HNFS + L H   + RRL R +               +E   S+P  ++ A+     ++V S+  D F+ +Q R ++ L +A  RG+I ++ I  C+F   E+ A+L+P P AP+      E  Y TW+ RL        +SP    R C   + GW++E+  S    +   ++   A  W             EN+     WL DVL P A +    ++   R   A      + G   E                         P+ S +    +  P  +AKVL  LR AD+ G+WP +T  R LV++    G   V   S A      +    SD  T+      A+                                GSF++GA P   C  P+GN LFPEL +AAFELE  L   R PS+TIA+NRNAQF+PH D+G+GAGQS SLIVGLGDY GGEL+VEG + DIRY P+EFNGW QRHWT PF GER+SLVWFTPKGC+G+ G
Sbjct:  352 FHNFSPNTLAHDYLAYRRLDRIYHRGTVRLEDSPSTGVVEEQPSAPSNESTAIVKNRPFLVFSLTGDVFLHEQARRVIGLLIAICRGVIDSE-IIECMFD--EEYANLVPAPPAPSCGLVAGESTYMTWEGRLK-----TILSP----RRCDRYDKGWNEEEVVSAVELWEESLVRDVAAGWLWNGVTKDGRLNAENY-----WLDDVLNPWATKTRVILDDYRRWKTAKEESSAIDGTLAESL---------------------LPPVSSID----TMVPELYAKVLYHLRLADSSGNWPTTTPKRQLVMVSTSNGESQVKPLSVAMHVAKKKNDLRSDAYTFQEGEGGAS--------------------------------GSFSVGAMPGGQCEQPKGNILFPELVKAAFELEVALCPGREPSSTIAINRNAQFRPHTDNGAGAGQSTSLIVGLGDYVGGELMVEGAKKDIRYNPIEFNGWKQRHWTLPFRGERFSLVWFTPKGCDGVRG 791          
BLAST of mRNA_H-canaliculatus_F_contig1213.1848.1 vs. uniprot
Match: A0A7S2NHH0_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2NHH0_9DINO)

HSP 1 Score: 212 bits (539), Expect = 6.410e-60
Identity = 120/246 (48.78%), Postives = 139/246 (56.50%), Query Frame = 1
Query: 1723 APLCSEELSSLSAAPAAFAKVLRLLREADALGDWPMSTVSRSLVILGERGGGRDVGGGSDAGRTEITEGCDSDGSTWIGAAEPATLGEESRQPXXXXXXXXXXXXXXXXXXXXXXXXGSFTLGAFPPPCPPPRGNRLFPELARAAFELEAVLLSDRPPSTTIAVNRNAQFKPHVDSGSGAGQSRSLIVGLGDYTGGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFAGERYSLVWFTPKGCEGITG 2460
            AP C E +  +  AP A+ +VLRLLREA   G WP  +  R  VI G+                                    TL E                             GSF++G+ PPP   P GNRLFPELA  AFELE +LL  RPPS+TIA+N++AQF PHVDSG+GAGQ  SLIVGLGDY GGELVVEG  +DIRY P+EFNGWTQRHWT PF+GER+SLVWFTP GCEG  G
Sbjct:   22 APRC-ESILRVGGAPEAYVEVLRLLREAADSGRWPGISPGREKVIKGQ------------------------------------TLSENG------------------------GLGGSFSVGSMPPPLQAPAGNRLFPELAARAFELEGLLLPGRPPSSTIAINKHAQFLPHVDSGAGAGQGVSLIVGLGDYAGGELVVEGSALDIRYTPVEFNGWTQRHWTLPFSGERFSLVWFTPLGCEGQPG 206          
BLAST of mRNA_H-canaliculatus_F_contig1213.1848.1 vs. uniprot
Match: A0A7S1BDW6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BDW6_9STRA)

HSP 1 Score: 205 bits (521), Expect = 4.350e-58
Identity = 95/130 (73.08%), Postives = 110/130 (84.62%), Query Frame = 1
Query: 2074 GSFTLGAFPP-PCPPPRGNRLFPELARAAFELEAVLLSDRPPSTTIAVNRNAQFKPHVDSGSGAGQSRSLIVGLGDYTGGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFAGERYSLVWFTPKGCEGITG 2460
            GSF++G  P   C PP+GN LFPEL +AAFELE VL  +RPPS+TIA+NRNAQF+PH+DSG+GAGQS SLIVG+G Y+GGELVVEG+  DIRYRPLEF+GWTQRHWT PF GER+SLVWFTPKGCE   G
Sbjct:   31 GSFSVGIMPGIGCEPPKGNTLFPELTKAAFELEQVLCPNRPPSSTIAINRNAQFRPHIDSGAGAGQSTSLIVGIGAYSGGELVVEGKREDIRYRPLEFDGWTQRHWTLPFTGERFSLVWFTPKGCEDRRG 160          
BLAST of mRNA_H-canaliculatus_F_contig1213.1848.1 vs. uniprot
Match: A0A7S4ELS6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ELS6_9STRA)

HSP 1 Score: 221 bits (563), Expect = 2.330e-57
Identity = 167/512 (32.62%), Postives = 243/512 (47.46%), Query Frame = 1
Query: 1009 RCPLWHNFSASALPHSPSSQRRLYRFFAMEVIQ------SSPGGDADAVDYVVLSVNADAFMSQQVRGMVALAVAGVRGLISADDIAACIFPAAEDIADLLPVPLAPAAPCSLAEVGYSTWQMRLGVGGGGVCMSPGAQQRGCLPLEGWSDEKTRSEGAKFRRRVLESAAKWWENHHGGVS--------WLRDVLQPGALQLGREVEASSR------RTLASVGGKMVGGNEDECRGNGEGDVGGSRDGSSDSKRAGAAPLCSEELSSLS-------AAPAAFAKVLRLLREADALGDWPMSTVSRSLVILGERGGGRDVGGGSDAGRTEITEGCDSDGSTWIGAAEPATLGEESRQPXXXXXXXXXXXXXXXXXXXXXXXXGSFTLGAFPPPCPP-PRGNRLFPELARAAFELEAVLLSDRPPSTTIAVNRNAQFKPHVDSGSGAGQSRSLIVGLGDYTGGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFAGERYSLVWFTPKGCEGITG 2460
            +C  +HNF+   + H   + RR+ R +    ++       +P    +   Y+VLS++ D F++ Q   +V + VA   G+I  + I  C+F   ED   L+P P AP      +EV Y+  + R         +SP    R     EGW +E T      +++ V +     W+ +    S        W  +VL P A +  R +E   R      ++L      +                       S  + +GAA   + EL            AP  +  VL  LR+ D  G+WP ++  R +V++            S++   ++ +     GS  I  A+ A   E+++                          GSF++G  P      P+ N +FP+L RAAFELE  L  +R PS+TIA+NRNAQF+PH DSG+GAGQS SLIVGLG Y GGEL+VEG++ DIRY+ LEF+GW QRHWT PF GER+SLVWFTPKGCEG+ G
Sbjct:  370 KCRRYHNFTEKLMAHDYLTSRRVDRIYHRATLKFPMKNCEAPESTTENTTYMVLSMSGDVFLTGQACRLVGVIVALGNGMIDPEFID-CVFD--EDYPHLIPTPPAPHYGMVSSEVHYANQEGRTK-----RILSPRMSTR---YKEGWCNETTIRRMKDWQKEVYKFVDSKWKKNGRDESGRLKSEQEWTENVLLPWADKAKRHLEDYKRWKKNQEQSLTKPNFSLA----------------------STKEASGAASSSAPELPPAPQIEPIDPTAPDIYHDVLSHLRKLDKSGEWPSTSSKRQIVMV------------SNSATGDLNDKNSGPGSLAIACAK-AKRNEQTKS------------CAYSFVEGQGGASGSFSVGIMPGGLQKQPKANSMFPDLVRAAFELETKLFPEREPSSTIAINRNAQFRPHTDSGAGAGQSTSLIVGLGTYDGGELMVEGDQHDIRYKALEFDGWKQRHWTMPFNGERFSLVWFTPKGCEGMKG 823          
BLAST of mRNA_H-canaliculatus_F_contig1213.1848.1 vs. uniprot
Match: A0A7S4QKS2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QKS2_9STRA)

HSP 1 Score: 213 bits (542), Expect = 8.510e-57
Identity = 166/492 (33.74%), Postives = 239/492 (48.58%), Query Frame = 1
Query: 1021 WHNFSASALPHSPSSQRRLYRFFAMEVIQSSPGGDADAVD---------------YVVLSVNADAFMSQQVRGMVALAVAGVRGLISADDIAACIFPAAEDIADLLPVPLAPAAPCSLAEVGYSTWQMRLGVGGGGVCMSPGAQQRGCLPLEGWSDEKTRSEGAKFRRRVLESAAKWW-----ENHHGGV----SWLRDVLQPGALQLGREVEASSRRTLASVGGKMVGGNEDECRGNGEGDVGGSRDGSSDSKRAGAAPLCSEELSSL-SAAPAAFAKVLRLLREADALGDWPMSTVSRSLVILGERGGGRDVGGGSDAGRTEITEGCDSDGSTWIGAAEPATLGEESRQPXXXXXXXXXXXXXXXXXXXXXXXXGSFTLGAFPPP-CPPPRGNRLFPELARAAFELEAVLLSDRPPSTTIAVNRNAQFKPHVDSGSGAGQSRSLIVGLGDYTGGELVVEGEEVDIRYRPLEFNGWTQRHWTRPFAGERYS 2418
            +HNF+++ + H   + RRL RFF    ++    G AD  +               ++ L++  D F++ Q R ++AL +A  RG I  +DI  C+F   E+  +L+P+   P+         Y +W+ ++        +SP   ++  L   G++DE T      F+  V    A  W     +N  G +     W  +VLQP A++   +++   +   A    ++V  +  E                        A   +  L S+ ++ P  F KVL+ LREAD+ G WP +T  R LV++  +          DA  T+     D++GS  I    P      S                           GSF++GA P      P+GN LFPEL +AAFELE  L  +R PS+TIAVNRNAQF+PH DSG+GAGQS SLIVGLG YTGGEL+VEGE+ DIRY+ +EFNGW QRHWT PF GER+S
Sbjct:   68 FHNFTSTVMAHEFLAYRRLDRFFHRATVRFDENGAADKEEELPEGSNNAFHSKRPFLALTLTGDLFLNGQARRVIALFLAICRGCID-EDILDCVFD--EEYTNLVPIVPLPSFGMYAEGSTYMSWEGKIK-----AILSP---RKADLYDRGFNDEDTIRSVEHFQHDVFREVASAWCRKGEDNVTGRLVSEQKWTEEVLQPWAVKAKEQLQDYRKWKEAK---RLVSDSNTETE--------------------MVAETLAPSLESVDTSVPHLFQKVLKYLREADSSGLWPTTTPKRQLVMVSTKE--------EDATGTQN----DNNGSDTI--VSPKINTSLSAAHMRAKSNKEIRSSAYAFVEGQGGASGSFSIGAMPKKQSEQPKGNTLFPELMKAAFELEIALCPEREPSSTIAVNRNAQFRPHTDSGAGAGQSTSLIVGLGTYTGGELMVEGEKKDIRYKAIEFNGWKQRHWTLPFHGERFS 511          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1213.1848.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQI5_ECTSI0.000e+069.07PseudoU_synth_1 domain-containing protein n=2 Tax=... [more]
A0A835YK11_9STRA4.510e-7634.23Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A1Z5JI73_FISSO1.760e-7530.70Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B7FNZ7_PHATC2.010e-7429.84Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2Y9F9_9STRA5.980e-6736.01Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B8C5S1_THAPS1.010e-6435.21PseudoU_synth_1 domain-containing protein n=1 Tax=... [more]
A0A7S2NHH0_9DINO6.410e-6048.78Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
A0A7S1BDW6_9STRA4.350e-5873.08Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S4ELS6_9STRA2.330e-5732.62Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4QKS2_9STRA8.510e-5733.74Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1213contigH-canaliculatus_F_contig1213:2990..6531 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score945.7
Seed ortholog evalue1.5e-272
Seed eggNOG ortholog2880.D7FQI5
Preferred namePUS1
KEGG koko:K06173,ko:K20674
KEGG Pathwayko04624,map04624
GOsGO:0000049,GO:0000959,GO:0000963,GO:0001522,GO:0002153,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003723,GO:0003727,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009889,GO:0009891,GO:0009893,GO:0009982,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0019219,GO:0019222,GO:0030374,GO:0031119,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070013,GO:0070525,GO:0070900,GO:0070902,GO:0071704,GO:0080090,GO:0090304,GO:0090646,GO:0097159,GO:0106029,GO:0140053,GO:0140098,GO:0140101,GO:0140110,GO:1900864,GO:1901360,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990481,GO:2000112,GO:2001141
EggNOG free text desc.pseudouridine synthase activity
EggNOG OGsCOG0101@1,KOG2553@2759
EC5.4.99.12
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03016
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPseudouridine synthase
Ec32 orthologEc-01_008790.1
Exons5
Model size2484
Cds size2484
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1213.1848.1prot_H-canaliculatus_F_contig1213.1848.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1213 2990..6531 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928926.77897-CDS-H-canaliculatus_F_contig1213:2989..36511622928926.77897-CDS-H-canaliculatus_F_contig1213:2989..3651Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1213 2990..3651 +
1696845615.419247-CDS-H-canaliculatus_F_contig1213:2989..36511696845615.419247-CDS-H-canaliculatus_F_contig1213:2989..3651Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1213 2990..3651 +
1622928926.7927125-CDS-H-canaliculatus_F_contig1213:4045..42051622928926.7927125-CDS-H-canaliculatus_F_contig1213:4045..4205Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1213 4046..4205 +
1696845615.4371567-CDS-H-canaliculatus_F_contig1213:4045..42051696845615.4371567-CDS-H-canaliculatus_F_contig1213:4045..4205Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1213 4046..4205 +
1622928926.810903-CDS-H-canaliculatus_F_contig1213:4522..48851622928926.810903-CDS-H-canaliculatus_F_contig1213:4522..4885Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1213 4523..4885 +
1696845615.4458108-CDS-H-canaliculatus_F_contig1213:4522..48851696845615.4458108-CDS-H-canaliculatus_F_contig1213:4522..4885Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1213 4523..4885 +
1622928926.9046123-CDS-H-canaliculatus_F_contig1213:5178..59861622928926.9046123-CDS-H-canaliculatus_F_contig1213:5178..5986Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1213 5179..5986 +
1696845615.4539044-CDS-H-canaliculatus_F_contig1213:5178..59861696845615.4539044-CDS-H-canaliculatus_F_contig1213:5178..5986Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1213 5179..5986 +
1622928926.9219372-CDS-H-canaliculatus_F_contig1213:6040..65311622928926.9219372-CDS-H-canaliculatus_F_contig1213:6040..6531Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1213 6041..6531 +
1696845615.4621084-CDS-H-canaliculatus_F_contig1213:6040..65311696845615.4621084-CDS-H-canaliculatus_F_contig1213:6040..6531Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1213 6041..6531 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1213.1848.1

>prot_H-canaliculatus_F_contig1213.1848.1 ID=prot_H-canaliculatus_F_contig1213.1848.1|Name=mRNA_H-canaliculatus_F_contig1213.1848.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=828bp
GRLEENETEDKADLTGLSNCSTPLLAMPSRDDTEGGPPHRRGRRGKMDPR
SPKLALEREDPVLPSPPPETPAAELASTSVTQPLTTCTFCGEEFPTRSSM
FRHLERASDTCPAPRQDSGQKVLLLVGYDSCSMIEAGLGRATAPPTQLLR
GGVIGGEGAAAFVLKAMGVGVERGTEGTAVSGGDNSSRYCFSRPKGGFSQ
ASSVASRTCPLLAQEAEVSATADTICLRAPTTIPLEGLRGWLDETNDALR
RDENGKGAVQLLGRMAVPTTFHAEIHAKRRRYEYLLPAWLLDETADGPWP
GPPRGQENIIPLLRRLRRMGLLPFGHCNGDHDGTRRRCPLWHNFSASALP
HSPSSQRRLYRFFAMEVIQSSPGGDADAVDYVVLSVNADAFMSQQVRGMV
ALAVAGVRGLISADDIAACIFPAAEDIADLLPVPLAPAAPCSLAEVGYST
WQMRLGVGGGGVCMSPGAQQRGCLPLEGWSDEKTRSEGAKFRRRVLESAA
KWWENHHGGVSWLRDVLQPGALQLGREVEASSRRTLASVGGKMVGGNEDE
CRGNGEGDVGGSRDGSSDSKRAGAAPLCSEELSSLSAAPAAFAKVLRLLR
EADALGDWPMSTVSRSLVILGERGGGRDVGGGSDAGRTEITEGCDSDGST
WIGAAEPATLGEESRQPPPERQQQQQQQQQQKEEHRGGGGSGSFTLGAFP
PPCPPPRGNRLFPELARAAFELEAVLLSDRPPSTTIAVNRNAQFKPHVDS
GSGAGQSRSLIVGLGDYTGGELVVEGEEVDIRYRPLEFNGWTQRHWTRPF
AGERYSLVWFTPKGCEGITGDARFLCR*
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mRNA from alignment at H-canaliculatus_F_contig1213:2990..6531+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1213.1848.1 ID=mRNA_H-canaliculatus_F_contig1213.1848.1|Name=mRNA_H-canaliculatus_F_contig1213.1848.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3542bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1213:2990..6531+ (Hapterophycus canaliculatus Oshoro5f female)
GGCAGACTTGAAGAAAATGAGACAGAAGACAAGGCAGACTTGACGGGACT CTCAAACTGCTCTACACCACTACTAGCTATGCCAAGCAGAGATGACACCG AGGGAGGACCGCCCCACCGAAGAGGAAGGCGAGGAAAAATGGACCCTCGC AGTCCGAAGCTTGCCCTCGAGCGAGAAGACCCGGTGTTGCCGTCGCCTCC ACCAGAAACACCGGCCGCGGAACTTGCCTCTACTTCTGTAACCCAGCCTC TCACCACATGTACGTTTTGCGGTGAGGAATTCCCAACGAGAAGCTCGATG TTCCGCCACCTGGAGCGGGCCTCTGACACCTGCCCGGCGCCACGGCAGGA CAGCGGTCAGAAAGTTCTTCTTCTGGTTGGATACGATTCCTGTTCCATGA TCGAGGCGGGGCTGGGGCGGGCAACCGCACCACCGACGCAGCTGCTTCGG GGAGGGGTTATTGGAGGAGAAGGTGCGGCGGCTTTTGTGCTCAAGGCCAT GGGCGTTGGCGTGGAGAGGGGGACAGAGGGTACTGCTGTTTCGGGCGGCG ACAATAGCTCCCGGTACTGCTTTAGTCGACCAAAAGGGGGGTTCAGTCAG GCCAGCTCGGTGGCTTCTCGTACGTGCCCCCTGCTGGCGCAGGAGGCCGA AGTCAGCGCGACGTGAGTTCGCAGGTCGAGGCGCTTCCTTGCTGCTCCGC ACCAACAAACGACGAACAACCAGCGTACCAAGCAGCAGGACAGTCGTGTT GGACCACGACTTTGGACTGTTGATACCGGCTAGTCGGAATAGCAGGATGA GCAGCATCAGTGTGCAACGTGCTCTGTATCCTGAGTATCGGAGGAGGCGG AAACCAGTCAACGCTCTTGGCGCGAACCAGGTACACCATGGAGCGCTGAG AAGATGCTGTGCCTCCCTGTGATACAAACGCGCAGGCATCTCGCGTGCGA GTACCTGCGGCAGCTTTAGTGGCATGCCTTAGCGACTCATCTGCTGACCC CGCTCGCGACCCCCCCTCCATGCTGTTTCCTATCGGCCGTCACCCACCAT AACCAGAGCGGATACCATATGCTTAAGAGCACCGACAACAATACCCTTGG AGGGGCTCCGAGGGTGGCTCGATGAAACCAACGACGCTCTCCGAAGAGAC GAGAACGGAAAGGGGGCAGTCCAGCTTCTGGGGCGAATGGCCGTCCCGAC CACCTTCCACGCGGAGGTGATCTCGGACGCCAACCTCCTCAATCCTCGTA ACACTTGGACCCCTACTTTTGTGTTGCCGCCGTTGGGCGCCAGAGATGCT TTGTGCAGAGCGCGAATGCTGTCGGTTCCCATCAAGCCAACGGAGAAGAG AATGAGCACACATCAGATGAGGCTGCTGCTGCAATGCACCTTGGTAGCGT CTGGCACAAGCGTCTTCGATTAAGCGAACGACTGATCTCAAGTGCGTTTT TATGCCCATCGTATTTATTCCTGCCTGGCAGCAGCGTCGCCAAACCTTGC TCACCCGCATCTGCGAACTCCTCACTTCGGCAGATTCACGCCAAGAGGCG ACGGTACGAGTACCTTCTGCCGGCTTGGTTGCTCGATGAGACCGCTGACG GTCCCTGGCCAGGGCCGCCCAGGGGGCAGGAGAATATTATCCCGTTGCTG AGACGCCTCCGACGGATGGGGCTGCTGCCTTTTGGGCACTGCAACGGCGA CCACGATGGCACGCGGCGGCGGTGCCCCCTCTGGCACAACTTCAGCGCGA GCGCGCTCCCGCACAGCCCCTCCTCTCAGCGCCGCCTCTACCGCTTCTTC GCGATGGAGGTTATTCAGTCATCGCCAGGGGGTGACGCGGATGCGGTGGA TTACGTGGTCCTCTCCGTCAACGCCGATGCGTTCATGAGCCAGCAGGTGA GGGAGGCTGCAGGATAACCAAAAGTCATCGTACTCCAGCCCTCTTGTTGC GTGATTGGAGCAGACGCCTCCATTCTCGCACAGCTAGCCGTGAGACGACA GTCACGCCCTCTCAGTTTGTTCTCCTTGAGCTGACTGCACGGGATCTATC CGCCACCAGATCCGACGTACGCGGAACTACCCCTTGTGCCTCGTGTTCCC TCTCGCGCGCGTTCACCGACTCCGCGCGGCGCCTGTTGCACCGACTCCGC TCGGCGCCTGTTGTTGTACGTATTTCCACGCCACCCTAGGTCAGAGGGAT GGTGGCTCTCGCCGTTGCCGGGGTGAGGGGTCTCATCTCGGCAGATGACA TCGCGGCGTGTATCTTTCCCGCCGCCGAGGATATCGCGGACCTTCTGCCG GTCCCGCTCGCTCCCGCGGCGCCTTGCTCGCTGGCGGAGGTGGGTTACTC GACCTGGCAGATGAGGCTCGGCGTCGGGGGGGGAGGCGTGTGCATGTCCC CGGGCGCGCAGCAGCGGGGGTGCCTTCCGTTGGAGGGATGGAGCGACGAG AAGACGAGGTCGGAGGGCGCGAAATTTCGGCGCCGCGTCCTCGAAAGCGC GGCGAAGTGGTGGGAGAACCATCACGGCGGGGTCAGCTGGCTGCGGGACG TTCTTCAGCCGGGCGCGCTCCAGCTTGGGAGGGAGGTGGAGGCCTCAAGC AGGCGAACTCTTGCCTCGGTAGGCGGCAAGATGGTGGGTGGGAACGAGGA CGAATGCCGTGGCAACGGTGAGGGTGATGTCGGGGGGTCTAGAGACGGCT CGAGCGACAGCAAGAGGGCGGGCGCGGCCCCGTTGTGTTCCGAAGAGTTG TCCTCACTGAGCGCTGCGCCCGCCGCCTTCGCGAAGGTTTTGCGATTGCT GAGAGAAGCGGACGCCTTGGGGGATTGGCCCATGAGCACAGTGTCGCGCA GCCTGGTCATCTTGGGGGAGAGAGGAGGCGGTCGAGACGTGGGAGGTGGC TCTGATGCTGGTCGGACGGAAATTACGGAAGGCTGCGATTCCGATGGCTC AACGTGGATAGGAGCAGCAGAACCAGCAACCCTGGGAGAAGAATCCCGTA GGAAGGAGGTCGAGAGCGTTACCGCAGCGCACACGGACGACCAGGAACAA GGGCAGCCCCCTCCGGAACGTCAGCAGCAGCAGCAGCAGCAGCAGCAGCA GAAGGAGGAGCACCGTGGTGGCGGCGGGTCCGGCTCGTTCACCCTCGGCG CCTTCCCGCCTCCCTGCCCCCCGCCTCGCGGCAACCGCTTGTTCCCCGAG CTCGCGAGAGCGGCGTTCGAGCTGGAGGCCGTCCTGCTCTCCGACCGACC GCCGTCCACCACCATAGCCGTCAACAGGAACGCGCAGTTCAAGCCGCACG TGGACAGCGGGTCTGGGGCCGGACAGAGCAGGAGCCTTATAGTGGGGCTT GGCGACTACACCGGCGGAGAGCTCGTCGTGGAGGGCGAAGAGGTGGACAT CCGTTACCGCCCGCTGGAGTTCAACGGGTGGACCCAGAGGCACTGGACGA GGCCGTTCGCCGGCGAGAGGTATTCGCTGGTCTGGTTCACCCCGAAGGGC TGCGAAGGGATCACCGGCGATGCGCGCTTTTTGTGTCGTTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1213:2990..6531+

>mRNA_H-canaliculatus_F_contig1213.1848.1 ID=mRNA_H-canaliculatus_F_contig1213.1848.1|Name=mRNA_H-canaliculatus_F_contig1213.1848.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4968bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1213:2990..6531+ (Hapterophycus canaliculatus Oshoro5f female)
GGCAGACTTGAAGAAAATGAGACAGAAGACAAGGCAGACTTGACGGGACT
CTCAAACTGCTCTACACCACTACTAGCTATGCCAAGCAGAGATGACACCG
AGGGAGGACCGCCCCACCGAAGAGGAAGGCGAGGAAAAATGGACCCTCGC
AGTCCGAAGCTTGCCCTCGAGCGAGAAGACCCGGTGTTGCCGTCGCCTCC
ACCAGAAACACCGGCCGCGGAACTTGCCTCTACTTCTGTAACCCAGCCTC
TCACCACATGTACGTTTTGCGGTGAGGAATTCCCAACGAGAAGCTCGATG
TTCCGCCACCTGGAGCGGGCCTCTGACACCTGCCCGGCGCCACGGCAGGA
CAGCGGTCAGAAAGTTCTTCTTCTGGTTGGATACGATTCCTGTTCCATGA
TCGAGGCGGGGCTGGGGCGGGCAACCGCACCACCGACGCAGCTGCTTCGG
GGAGGGGTTATTGGAGGAGAAGGTGCGGCGGCTTTTGTGCTCAAGGCCAT
GGGCGTTGGCGTGGAGAGGGGGACAGAGGGTACTGCTGTTTCGGGCGGCG
ACAATAGCTCCCGGTACTGCTTTAGTCGACCAAAAGGGGGGTTCAGTCAG
GCCAGCTCGGTGGCTTCTCGTACGTGCCCCCTGCTGGCGCAGGAGGCCGA
AGTCAGCGCGACGGCAGACTTGAAGAAAATGAGACAGAAGACAAGGCAGA
CTTGACGGGACTCTCAAACTGCTCTACACCACTACTAGCTATGCCAAGCA
GAGATGACACCGAGGGAGGACCGCCCCACCGAAGAGGAAGGCGAGGAAAA
ATGGACCCTCGCAGTCCGAAGCTTGCCCTCGAGCGAGAAGACCCGGTGTT
GCCGTCGCCTCCACCAGAAACACCGGCCGCGGAACTTGCCTCTACTTCTG
TAACCCAGCCTCTCACCACATGTACGTTTTGCGGTGAGGAATTCCCAACG
AGAAGCTCGATGTTCCGCCACCTGGAGCGGGCCTCTGACACCTGCCCGGC
GCCACGGCAGGACAGCGGTCAGAAAGTTCTTCTTCTGGTTGGATACGATT
CCTGTTCCATGATCGAGGCGGGGCTGGGGCGGGCAACCGCACCACCGACG
CAGCTGCTTCGGGGAGGGGTTATTGGAGGAGAAGGTGCGGCGGCTTTTGT
GCTCAAGGCCATGGGCGTTGGCGTGGAGAGGGGGACAGAGGGTACTGCTG
TTTCGGGCGGCGACAATAGCTCCCGGTACTGCTTTAGTCGACCAAAAGGG
GGGTTCAGTCAGGCCAGCTCGGTGGCTTCTCGTACGTGCCCCCTGCTGGC
GCAGGAGGCCGAAGTCAGCGCGACAGCGGATACCATATGCTTAAGAGCAC
CGACAACAATACCCTTGGAGGGGCTCCGAGGGTGGCTCGATGAAACCAAC
GACGCTCTCCGAAGAGACGAGAACGGAAAGGGGGCAGTCCAGCTTCTGGG
GCGAATGGCCGTCCCGACCACCTTCCACGCGGAGAGCGGATACCATATGC
TTAAGAGCACCGACAACAATACCCTTGGAGGGGCTCCGAGGGTGGCTCGA
TGAAACCAACGACGCTCTCCGAAGAGACGAGAACGGAAAGGGGGCAGTCC
AGCTTCTGGGGCGAATGGCCGTCCCGACCACCTTCCACGCGGAGATTCAC
GCCAAGAGGCGACGGTACGAGTACCTTCTGCCGGCTTGGTTGCTCGATGA
GACCGCTGACGGTCCCTGGCCAGGGCCGCCCAGGGGGCAGGAGAATATTA
TCCCGTTGCTGAGACGCCTCCGACGGATGGGGCTGCTGCCTTTTGGGCAC
TGCAACGGCGACCACGATGGCACGCGGCGGCGGTGCCCCCTCTGGCACAA
CTTCAGCGCGAGCGCGCTCCCGCACAGCCCCTCCTCTCAGCGCCGCCTCT
ACCGCTTCTTCGCGATGGAGGTTATTCAGTCATCGCCAGGGGGTGACGCG
GATGCGGTGGATTACGTGGTCCTCTCCGTCAACGCCGATGCGTTCATGAG
CCAGCAGATTCACGCCAAGAGGCGACGGTACGAGTACCTTCTGCCGGCTT
GGTTGCTCGATGAGACCGCTGACGGTCCCTGGCCAGGGCCGCCCAGGGGG
CAGGAGAATATTATCCCGTTGCTGAGACGCCTCCGACGGATGGGGCTGCT
GCCTTTTGGGCACTGCAACGGCGACCACGATGGCACGCGGCGGCGGTGCC
CCCTCTGGCACAACTTCAGCGCGAGCGCGCTCCCGCACAGCCCCTCCTCT
CAGCGCCGCCTCTACCGCTTCTTCGCGATGGAGGTTATTCAGTCATCGCC
AGGGGGTGACGCGGATGCGGTGGATTACGTGGTCCTCTCCGTCAACGCCG
ATGCGTTCATGAGCCAGCAGGTCAGAGGGATGGTGGCTCTCGCCGTTGCC
GGGGTGAGGGGTCTCATCTCGGCAGATGACATCGCGGCGTGTATCTTTCC
CGCCGCCGAGGATATCGCGGACCTTCTGCCGGTCCCGCTCGCTCCCGCGG
CGCCTTGCTCGCTGGCGGAGGTGGGTTACTCGACCTGGCAGATGAGGCTC
GGCGTCGGGGGGGGAGGCGTGTGCATGTCCCCGGGCGCGCAGCAGCGGGG
GTGCCTTCCGTTGGAGGGATGGAGCGACGAGAAGACGAGGTCGGAGGGCG
CGAAATTTCGGCGCCGCGTCCTCGAAAGCGCGGCGAAGTGGTGGGAGAAC
CATCACGGCGGGGTCAGCTGGCTGCGGGACGTTCTTCAGCCGGGCGCGCT
CCAGCTTGGGAGGGAGGTGGAGGCCTCAAGCAGGCGAACTCTTGCCTCGG
TAGGCGGCAAGATGGTGGGTGGGAACGAGGACGAATGCCGTGGCAACGGT
GAGGGTGATGTCGGGGGGTCTAGAGACGGCTCGAGCGACAGCAAGAGGGC
GGGCGCGGCCCCGTTGTGTTCCGAAGAGTTGTCCTCACTGAGCGCTGCGC
CCGCCGCCTTCGCGAAGGTTTTGCGATTGCTGAGAGAAGCGGACGCCTTG
GGGGATTGGCCCATGAGCACAGTGTCGCGCAGCCTGGTCATCTTGGGGGA
GAGAGGAGGCGGTCGAGACGTGGGAGGTGGCTCTGATGCTGGTCGGACGG
AAATTACGGAAGGCTGCGATTCCGATGGCTCAACGTGGATAGGAGCAGCA
GAACCAGCAACCCTGGGAGAAGAATCCCGTCAGAGGGATGGTGGCTCTCG
CCGTTGCCGGGGTGAGGGGTCTCATCTCGGCAGATGACATCGCGGCGTGT
ATCTTTCCCGCCGCCGAGGATATCGCGGACCTTCTGCCGGTCCCGCTCGC
TCCCGCGGCGCCTTGCTCGCTGGCGGAGGTGGGTTACTCGACCTGGCAGA
TGAGGCTCGGCGTCGGGGGGGGAGGCGTGTGCATGTCCCCGGGCGCGCAG
CAGCGGGGGTGCCTTCCGTTGGAGGGATGGAGCGACGAGAAGACGAGGTC
GGAGGGCGCGAAATTTCGGCGCCGCGTCCTCGAAAGCGCGGCGAAGTGGT
GGGAGAACCATCACGGCGGGGTCAGCTGGCTGCGGGACGTTCTTCAGCCG
GGCGCGCTCCAGCTTGGGAGGGAGGTGGAGGCCTCAAGCAGGCGAACTCT
TGCCTCGGTAGGCGGCAAGATGGTGGGTGGGAACGAGGACGAATGCCGTG
GCAACGGTGAGGGTGATGTCGGGGGGTCTAGAGACGGCTCGAGCGACAGC
AAGAGGGCGGGCGCGGCCCCGTTGTGTTCCGAAGAGTTGTCCTCACTGAG
CGCTGCGCCCGCCGCCTTCGCGAAGGTTTTGCGATTGCTGAGAGAAGCGG
ACGCCTTGGGGGATTGGCCCATGAGCACAGTGTCGCGCAGCCTGGTCATC
TTGGGGGAGAGAGGAGGCGGTCGAGACGTGGGAGGTGGCTCTGATGCTGG
TCGGACGGAAATTACGGAAGGCTGCGATTCCGATGGCTCAACGTGGATAG
GAGCAGCAGAACCAGCAACCCTGGGAGAAGAATCCCGGCAGCCCCCTCCG
GAACGTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAAGGAGGAGCACCG
TGGTGGCGGCGGGTCCGGCTCGTTCACCCTCGGCGCCTTCCCGCCTCCCT
GCCCCCCGCCTCGCGGCAACCGCTTGTTCCCCGAGCTCGCGAGAGCGGCG
TTCGAGCTGGAGGCCGTCCTGCTCTCCGACCGACCGCCGTCCACCACCAT
AGCCGTCAACAGGAACGCGCAGTTCAAGCCGCACGTGGACAGCGGGTCTG
GGGCCGGACAGAGCAGGAGCCTTATAGTGGGGCTTGGCGACTACACCGGC
GGAGAGCTCGTCGTGGAGGGCGAAGAGGTGGACATCCGTTACCGCCCGCT
GGAGTTCAACGGGTGGACCCAGAGGCACTGGACGAGGCCGTTCGCCGGCG
AGAGGTATTCGCTGGTCTGGTTCACCCCGAAGGGCTGCGAAGGGATCACC
GGCGATGCGCGCTTTTTGTGTCGTTAGGGCAGCCCCCTCCGGAACGTCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGAAGGAGGAGCACCGTGGTGGCGG
CGGGTCCGGCTCGTTCACCCTCGGCGCCTTCCCGCCTCCCTGCCCCCCGC
CTCGCGGCAACCGCTTGTTCCCCGAGCTCGCGAGAGCGGCGTTCGAGCTG
GAGGCCGTCCTGCTCTCCGACCGACCGCCGTCCACCACCATAGCCGTCAA
CAGGAACGCGCAGTTCAAGCCGCACGTGGACAGCGGGTCTGGGGCCGGAC
AGAGCAGGAGCCTTATAGTGGGGCTTGGCGACTACACCGGCGGAGAGCTC
GTCGTGGAGGGCGAAGAGGTGGACATCCGTTACCGCCCGCTGGAGTTCAA
CGGGTGGACCCAGAGGCACTGGACGAGGCCGTTCGCCGGCGAGAGGTATT
CGCTGGTCTGGTTCACCCCGAAGGGCTGCGAAGGGATCACCGGCGATGCG
CGCTTTTTGTGTCGTTAG
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