mRNA_H-canaliculatus_F_contig12116.1835.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12116.1835.1
Unique NamemRNA_H-canaliculatus_F_contig12116.1835.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig12116.1835.1 vs. uniprot
Match: D7G754_ECTSI (Protein kinase domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G754_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 2.100e-147
Identity = 276/439 (62.87%), Postives = 314/439 (71.53%), Query Frame = 1
Query:    1 KVPVGGYGEDQNLRYLVMSRLGPDVEAAQGKGEAWSLAQKAGYARQMLALLRTLHEKCKMVFVDVKPENFMFGLAGSANEDKIFLIDFGLSSRYTGPGGTIKPQEQRAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGSTVLPWSGSTSVASGLAVKKSTTLEALCQGCPSGMLRYMEAVRGMKHEEEPDYDGLDAMLKSMQSSAAAAEPARRGSKAVKGKPKATGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARAQRGSTVVAAAAKVPATPVTNGKRATPAVRRSGRLSSPRD-EKFFDALQEHGSNKKDXXXXXXXXXPMVTKVVKGAAKRTA--RGT------ATTARAASKATVKSKA-------VFLLEVLAGPHKGETLRLSAGGAEVRVGRNAPRKNGLRLDEDFEVSDK 1269
            ++P GGYGEDQNLRYLVMSRLGPDVEAA  K E WS+A+KAGYARQMLALLRTLHE C+MVF+DVKPENFMFG+  SA+EDKIFLIDFGLS+RYTGP G IKPQ Q AQ+QGTPEFLSLKCHGGASAGRCDDLESLGYVIV+MLKEG   LPWSGSTSV  GLA KKSTTLE +C+GCP+GML+YM+AVRG+++EE PDYD LDAMLKSM+S  A                     XXXXXXXXXXXX               XXXXXXXXXX             + K         +RAT AVRRS RLSSP+D E+F DALQEHG ++ +           VTKVV GAA +    RGT      +T A AA K + ++KA       VFLLEV++GPH+GETLR+ A GAEVRVGRNAPR+NGLRLD+DFEVSDK
Sbjct:   98 EIPPGGYGEDQNLRYLVMSRLGPDVEAALKKSEGWSVARKAGYARQMLALLRTLHESCRMVFIDVKPENFMFGVPDSADEDKIFLIDFGLSARYTGPAGAIKPQGQSAQIQGTPEFLSLKCHGGASAGRCDDLESLGYVIVAMLKEGDRALPWSGSTSVKDGLASKKSTTLEEVCEGCPAGMLKYMKAVRGLEYEETPDYDSLDAMLKSMESGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEERDVGACVDDGKXXXXXXXXXXXXXXXXXXXXXXGSPK---------QRATTAVRRSRRLSSPKDGEEFHDALQEHGMDEGEEEEEEDL---QVTKVVNGAANKGTGRRGTKPTEKLSTAAAAAVKKSTRAKATKAKANGVFLLEVVSGPHEGETLRMKASGAEVRVGRNAPRRNGLRLDKDFEVSDK 524          
BLAST of mRNA_H-canaliculatus_F_contig12116.1835.1 vs. uniprot
Match: D7FQK2_ECTSI (Protein kinase domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK2_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 4.940e-112
Identity = 167/217 (76.96%), Postives = 187/217 (86.18%), Query Frame = 1
Query:    1 KVPVGGYGEDQNLRYLVMSRLGPDVEAAQGKGEAWSLAQKAGYARQMLALLRTLHEKCKMVFVDVKPENFMFGLAGSANEDKIFLIDFGLSSRYTGPGGTIKPQEQRAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGSTVLPWSGSTSVASGLAVKKSTTLEALCQGCPSGMLRYMEAVRGMKHEEEPDYDGLDAMLKSMQSSAAAA 651
            ++P  GYGEDQNLRYLVM+RLG DVEAA    + WS+A+K GYARQMLALLR LHEKC+MVF+DVKPENFMFG+ GSA+EDKIFLIDFGLS+RY  P G IKPQ Q AQ+QGT EFLSLKCHGGASAGRCDDLESLGYVIVSMLKEG   LPWSGS+SV  GLA KKS TLEALC+GCP+GML YM+AVRGM+ EE PDYD LDA+LKSM+S+ AAA
Sbjct:   99 EIPRNGYGEDQNLRYLVMTRLGLDVEAALKTSKGWSVARKTGYARQMLALLRALHEKCQMVFIDVKPENFMFGVPGSADEDKIFLIDFGLSTRYVAPRGGIKPQGQSAQIQGTAEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGDRALPWSGSSSVKDGLAAKKSATLEALCRGCPAGMLEYMKAVRGMEFEEAPDYDKLDAVLKSMESAGAAA 315          
BLAST of mRNA_H-canaliculatus_F_contig12116.1835.1 vs. uniprot
Match: A0A835YU45_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU45_9STRA)

HSP 1 Score: 186 bits (471), Expect = 4.080e-50
Identity = 103/228 (45.18%), Postives = 142/228 (62.28%), Query Frame = 1
Query:    1 KVPV----GGYGEDQN--LRYLVMSRLGPDVEA--AQGKGEAWSLAQKAGYARQMLALLRTLHEKCKMVFVDVKPENFMFGLAGSANEDKIFLIDFGLSSRYTGPGGTIKPQEQRAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGSTVLPWSGSTSVASGLAVKKSTTLEALCQGCPSGMLRYMEAVRGMKHEEEPDYDGLDAMLKSMQSSAAAAEPA 660
            KVP     GG+G+D N  LR+L++ RLGPD+EA  ++ KG     AQ   Y RQ+L+ L+TLH+  K+VFVD KPENFM GL G++  D IF+ DFGL+  Y G GG  +P    A V+GTP++LSL CH G S GR DDLESLGYV++ +L+     LPW+ + S A GLA+K++  L  LC   P+ +  ++   R   +E  PDYD   A+L  + ++   A  A
Sbjct:   84 KVPALPLDGGFGDDPNALLRFLIIERLGPDLEALLSRHKGHGMPPAQVQNYGRQILSALKTLHDDHKVVFVDTKPENFMAGLPGTSKADTIFMADFGLARCYLGSGGGHRPFAT-AGVEGTPQYLSLSCHAGGSPGRRDDLESLGYVLLHLLQGPRQPLPWACAKSDAEGLALKRAADLRTLCAAAPA-LQEWIALARATPYEARPDYDRFFAILDKLAAAGVTATAA 309          
BLAST of mRNA_H-canaliculatus_F_contig12116.1835.1 vs. uniprot
Match: A0A7S2CWP9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CWP9_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.580e-38
Identity = 92/220 (41.82%), Postives = 130/220 (59.09%), Query Frame = 1
Query:    1 KVPVGG----YGEDQNLRYLVMSRLGPDV---EAAQGKGEAWSLAQKAGYARQMLALLRTLHEKCKMVFVDVKPENFMFGLAGSANEDKIFLIDFGLSSRYTGPGGTIKPQEQRAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGSTVLPWSGSTSVASGLAVKKSTTLEALCQGCPSG---MLRYMEAVRGMKHEEEPDYDGLDAMLKSM 630
            K+P GG    YG D  LRYLVM RLGPD+     +QG G   S +Q +G A QML  LR +HE+ K+VFVDVKP+NF  G+ GS   D + ++DFG++ ++   GG  + ++      GTP F+S++ H G +A R DDLESLG V++  L  GS  LPW  + S  + L  KK+    ALC+   +G   + RY E V+ M  + +PDY  L ++L  +
Sbjct:   25 KIPTGGSGTSYGSDHGLRYLVMERLGPDLMRYAESQGNGCLLSPSQLSGIAVQMLDALRRVHER-KLVFVDVKPDNFSLGIPGSKQSDTVHILDFGVAEKFM-IGGKHRDRDASGGG-GTPSFMSVEVHEGKAASRRDDLESLGLVLLKFLI-GS--LPWENAKSDKACLDCKKTADFHALCKSAAAGGDYLARYFEVVQSMAFDADPDYATLSSILSDL 238          
BLAST of mRNA_H-canaliculatus_F_contig12116.1835.1 vs. uniprot
Match: W7TN39_9STRA (Casein kinase n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN39_9STRA)

HSP 1 Score: 154 bits (389), Expect = 6.380e-38
Identity = 86/207 (41.55%), Postives = 126/207 (60.87%), Query Frame = 1
Query:   19 YGEDQNLRYLVMSRLGPDV-EAAQGKGEAWSLAQKAGYARQMLALLRTLHEKCKMVFVDVKPENFMFGLAGSANEDKIFLIDFGLSSRYTGPGGTIKPQEQRAQVQG---TPEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGSTVLPWSGSTSVASGLAVKKSTTLEALCQGCPSGML--RYMEAVRGMKHEEEPDYDGLDAML 621
            YGED+  R+LVM RLG D+ +  + +G  +S A  A Y +QML  ++ +HE+ +++F+DVKPENFM GL G+    ++FL+D GL  +YTG  G  KPQE +    G   TP F SL CH G  AGR DDLE+LG+V++   + G  VLPW+ +TS +  L +K+S  ++ L +G   G L  +++E  R   +E  P Y     +L
Sbjct:  120 YGEDKGFRFLVMQRLGQDLSQLFESQGRYFSPATLADYGKQMLDGIQQMHER-QLLFIDVKPENFMLGLPGTRASKRVFLVDLGLVEKYTGSNGVHKPQEGQGAAGGGVGTPLFSSLACHEGRPAGRRDDLEALGWVLLYFARGG--VLPWASATSDSECLKMKRSALVKDLSRGVVGGDLLAQFLEMARKTAYEAAPKYAAFAGLL 323          
BLAST of mRNA_H-canaliculatus_F_contig12116.1835.1 vs. uniprot
Match: W2HS82_PHYPR (CK1/CK1 protein kinase, variant 2 n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2HS82_PHYPR)

HSP 1 Score: 147 bits (370), Expect = 5.260e-37
Identity = 81/200 (40.50%), Postives = 119/200 (59.50%), Query Frame = 1
Query:    4 VPVGGYGEDQNLRYLVMSRLGPDVEAAQGKGEAWSLAQKAGYARQMLALLRTLHEKCKMVFVDVKPENFMFGLAGSANEDKIFLIDFGLSSRYTGPGGTIKPQEQRAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGSTVLPWSGSTSVASGLAVKKSTTLEALCQGCPSGMLRYMEAVRGMKHEEEPDYD 603
            VP+GGYGED+  RYLV+ RLG  +E    +      A  A    ++L  L+ +H K  +++VDVKPENFM     +  E+K++ +DFG+S RY    G  K  ++   V GTP FLSL CH GA++ R DD+ESL YV++ +++     LPW  ++S A G  +KK+T++E LC   PS     ++ +R    E+ PDYD
Sbjct:   95 VPMGGYGEDKGYRYLVIERLGRTLETVLMEQGPVPSATAARLGLEILETLQQMHVK-NILYVDVKPENFMLD---THRENKVYCVDFGISDRYVTATGKHKDYKE-GTVVGTPTFLSLSCHNGATSSRRDDIESLLYVLIYLMRGD---LPWQQASSDAEGAKIKKTTSVEHLCASLPSEWSTMLKQIRECGFEDRPDYD 286          
BLAST of mRNA_H-canaliculatus_F_contig12116.1835.1 vs. uniprot
Match: A0A4D9CRV9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRV9_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.330e-36
Identity = 86/207 (41.55%), Postives = 126/207 (60.87%), Query Frame = 1
Query:   19 YGEDQNLRYLVMSRLGPDV-EAAQGKGEAWSLAQKAGYARQMLALLRTLHEKCKMVFVDVKPENFMFGLAGSANEDKIFLIDFGLSSRYTGPGGTIKPQEQRAQVQG---TPEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGSTVLPWSGSTSVASGLAVKKSTTLEALCQGCPSGML--RYMEAVRGMKHEEEPDYDGLDAML 621
            YGED+  R+LVM RLG D+ +  + +G  +S A  A Y +QML  ++ +HE+ +++F+DVKPENFM GL G+   + +FL+D GL  +YTG  G  KPQE +    G   TP F SL CH G  AGR DDLE+LG+V++   + G  VLPW+ +TS +  L +K+S  ++ L +G   G L  +++E  R   +E  P Y     +L
Sbjct:  778 YGEDKGFRFLVMQRLGQDLSQLFESQGRYFSPATLADYGKQMLDGIQQMHER-QLLFIDVKPENFMLGLPGTRASNWVFLVDLGLVEKYTGSNGVHKPQEGQGAAGGGVGTPLFSSLACHEGRPAGRRDDLEALGWVLLYFARGG--VLPWASATSDSECLKMKRSALVKDLSRGVVGGDLLAQFLEMARKTAYEAAPKYAAFAGLL 981          
BLAST of mRNA_H-canaliculatus_F_contig12116.1835.1 vs. uniprot
Match: W2FLA2_PHYPR (CK1/CK1 protein kinase n=11 Tax=Phytophthora TaxID=4783 RepID=W2FLA2_PHYPR)

HSP 1 Score: 147 bits (370), Expect = 4.680e-36
Identity = 81/200 (40.50%), Postives = 119/200 (59.50%), Query Frame = 1
Query:    4 VPVGGYGEDQNLRYLVMSRLGPDVEAAQGKGEAWSLAQKAGYARQMLALLRTLHEKCKMVFVDVKPENFMFGLAGSANEDKIFLIDFGLSSRYTGPGGTIKPQEQRAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGSTVLPWSGSTSVASGLAVKKSTTLEALCQGCPSGMLRYMEAVRGMKHEEEPDYD 603
            VP+GGYGED+  RYLV+ RLG  +E    +      A  A    ++L  L+ +H K  +++VDVKPENFM     +  E+K++ +DFG+S RY    G  K  ++   V GTP FLSL CH GA++ R DD+ESL YV++ +++     LPW  ++S A G  +KK+T++E LC   PS     ++ +R    E+ PDYD
Sbjct:   92 VPMGGYGEDKGYRYLVIERLGRTLETVLMEQGPVPSATAARLGLEILETLQQMHVK-NILYVDVKPENFMLD---THRENKVYCVDFGISDRYVTATGKHKDYKE-GTVVGTPTFLSLSCHNGATSSRRDDIESLLYVLIYLMRGD---LPWQQASSDAEGAKIKKTTSVEHLCASLPSEWSTMLKQIRECGFEDRPDYD 283          
BLAST of mRNA_H-canaliculatus_F_contig12116.1835.1 vs. uniprot
Match: D0N9V7_PHYIT (Casein kinase I, putative n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0N9V7_PHYIT)

HSP 1 Score: 145 bits (366), Expect = 1.720e-35
Identity = 82/218 (37.61%), Postives = 125/218 (57.34%), Query Frame = 1
Query:    4 VPVGGYGEDQNLRYLVMSRLGPDVEAAQGKGEAWSLAQKAGYARQMLALLRTLHEKCKMVFVDVKPENFMFGLAGSANEDKIFLIDFGLSSRYTGPGGTIKPQEQRAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGSTVLPWSGSTSVASGLAVKKSTTLEALCQGCPSGMLRYMEAVRGMKHEEEPDYDGLDAMLKSMQSSAAAAEP 657
            VP+G YGED+  R+LV+ RLG  +E    +    S A  A   +++L  L+ +H K  +++VDVKPENFM  +    +E+ ++ +DFG+S RY    G  K  ++   V GTP FLS+ CH GA++ R DD+ESL YV+V +++     LPW  ++S A G  +KKST++E LC   P+     ++ +R    E+ PDYD     L  +  S   + P
Sbjct:   92 VPMGAYGEDKGYRFLVIERLGRTLETVLQEQGPVSSATAARLGQEILETLQQMHVK-NILYVDVKPENFMLDMR---SENTVYCVDFGISDRYVTATGKHKEYKE-GTVVGTPTFLSINCHDGATSSRRDDIESLLYVLVYLMRGN---LPWQKASSDAEGAKIKKSTSVEQLCASLPNAWGAMLKNIRYCGFEDRPDYDFFVMQLSKLGGSKGLSTP 301          
BLAST of mRNA_H-canaliculatus_F_contig12116.1835.1 vs. uniprot
Match: G5AB04_PHYSP (Protein kinase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AB04_PHYSP)

HSP 1 Score: 143 bits (360), Expect = 1.250e-34
Identity = 78/200 (39.00%), Postives = 117/200 (58.50%), Query Frame = 1
Query:    4 VPVGGYGEDQNLRYLVMSRLGPDVEAAQGKGEAWSLAQKAGYARQMLALLRTLHEKCKMVFVDVKPENFMFGLAGSANEDKIFLIDFGLSSRYTGPGGTIKPQEQRAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGSTVLPWSGSTSVASGLAVKKSTTLEALCQGCPSGMLRYMEAVRGMKHEEEPDYD 603
            VP+G YGED+  R+LV+ RLG  +E    +      A  A   +++L  L+ +H K  +++VDVKPENFM     +  ED ++ +DFG+S RY    G  K  ++   V GTP FLSL CH GA++ R DD+ESL YV++ +++     LPW  ++S A G  +KKST+++ LC   P      ++ +R    E+ PDYD
Sbjct:   92 VPMGAYGEDKGYRFLVIERLGRTLETVLQEQGPVPSATAARLGQEILDTLQQMHVK-NILYVDVKPENFMLD---TDKEDTVYCVDFGISDRYVAATGKHKDYKE-GTVVGTPTFLSLNCHNGATSSRRDDIESLLYVLIYLMRGD---LPWQQASSDAEGAKIKKSTSVDQLCASLPREWAAMLKNIRECGFEDRPDYD 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12116.1835.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G754_ECTSI2.100e-14762.87Protein kinase domain containing protein n=2 Tax=E... [more]
D7FQK2_ECTSI4.940e-11276.96Protein kinase domain containing protein n=1 Tax=E... [more]
A0A835YU45_9STRA4.080e-5045.18Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S2CWP9_9STRA3.580e-3841.82Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
W7TN39_9STRA6.380e-3841.55Casein kinase n=3 Tax=Nannochloropsis gaditana Tax... [more]
W2HS82_PHYPR5.260e-3740.50CK1/CK1 protein kinase, variant 2 n=8 Tax=Phytopht... [more]
A0A4D9CRV9_9STRA1.330e-3641.55Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W2FLA2_PHYPR4.680e-3640.50CK1/CK1 protein kinase n=11 Tax=Phytophthora TaxID... [more]
D0N9V7_PHYIT1.720e-3537.61Casein kinase I, putative n=3 Tax=Phytophthora inf... [more]
G5AB04_PHYSP1.250e-3439.00Protein kinase domain-containing protein n=1 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12116contigH-canaliculatus_F_contig12116:167..3373 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score446.8
Seed ortholog evalue1.1e-122
Seed eggNOG ortholog2880.D7G754
KEGG koko:K02218
KEGG Pathwayko04011,ko04392,map04011,map04392
EggNOG free text desc.peptidyl-serine phosphorylation
EggNOG OGsKOG1164@1,KOG1165@2759
Ec32 ortholog descriptionProtein kinase domain containing protein
Ec32 orthologEc-01_009000.1
EC2.7.11.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Exons6
Model size1272
Cds size1272
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12116.1835.1prot_H-canaliculatus_F_contig12116.1835.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12116 167..3373 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928925.3893666-CDS-H-canaliculatus_F_contig12116:166..3681622928925.3893666-CDS-H-canaliculatus_F_contig12116:166..368Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12116 167..368 +
1696845614.7802038-CDS-H-canaliculatus_F_contig12116:166..3681696845614.7802038-CDS-H-canaliculatus_F_contig12116:166..368Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12116 167..368 +
1622928925.405372-CDS-H-canaliculatus_F_contig12116:860..9361622928925.405372-CDS-H-canaliculatus_F_contig12116:860..936Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12116 861..936 +
1696845614.7937028-CDS-H-canaliculatus_F_contig12116:860..9361696845614.7937028-CDS-H-canaliculatus_F_contig12116:860..936Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12116 861..936 +
1622928925.4286044-CDS-H-canaliculatus_F_contig12116:1542..16501622928925.4286044-CDS-H-canaliculatus_F_contig12116:1542..1650Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12116 1543..1650 +
1696845614.803472-CDS-H-canaliculatus_F_contig12116:1542..16501696845614.803472-CDS-H-canaliculatus_F_contig12116:1542..1650Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12116 1543..1650 +
1622928925.4438474-CDS-H-canaliculatus_F_contig12116:2060..24331622928925.4438474-CDS-H-canaliculatus_F_contig12116:2060..2433Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12116 2061..2433 +
1696845614.8132672-CDS-H-canaliculatus_F_contig12116:2060..24331696845614.8132672-CDS-H-canaliculatus_F_contig12116:2060..2433Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12116 2061..2433 +
1622928925.4643235-CDS-H-canaliculatus_F_contig12116:2493..28741622928925.4643235-CDS-H-canaliculatus_F_contig12116:2493..2874Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12116 2494..2874 +
1696845614.8230815-CDS-H-canaliculatus_F_contig12116:2493..28741696845614.8230815-CDS-H-canaliculatus_F_contig12116:2493..2874Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12116 2494..2874 +
1622928925.4873643-CDS-H-canaliculatus_F_contig12116:3241..33731622928925.4873643-CDS-H-canaliculatus_F_contig12116:3241..3373Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12116 3242..3373 +
1696845614.833212-CDS-H-canaliculatus_F_contig12116:3241..33731696845614.833212-CDS-H-canaliculatus_F_contig12116:3241..3373Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12116 3242..3373 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12116.1835.1

>prot_H-canaliculatus_F_contig12116.1835.1 ID=prot_H-canaliculatus_F_contig12116.1835.1|Name=mRNA_H-canaliculatus_F_contig12116.1835.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=424bp
KVPVGGYGEDQNLRYLVMSRLGPDVEAAQGKGEAWSLAQKAGYARQMLAL
LRTLHEKCKMVFVDVKPENFMFGLAGSANEDKIFLIDFGLSSRYTGPGGT
IKPQEQRAQVQGTPEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGSTV
LPWSGSTSVASGLAVKKSTTLEALCQGCPSGMLRYMEAVRGMKHEEEPDY
DGLDAMLKSMQSSAAAAEPARRGSKAVKGKPKATGGGGGSGKSASARGAS
TKTEEEEEEAVEVCEVEKKGKGRAARAQRGSTVVAAAAKVPATPVTNGKR
ATPAVRRSGRLSSPRDEKFFDALQEHGSNKKDQEEEEEEEEPMVTKVVKG
AAKRTARGTATTARAASKATVKSKAVFLLEVLAGPHKGETLRLSAGGAEV
RVGRNAPRKNGLRLDEDFEVSDK*
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mRNA from alignment at H-canaliculatus_F_contig12116:167..3373+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12116.1835.1 ID=mRNA_H-canaliculatus_F_contig12116.1835.1|Name=mRNA_H-canaliculatus_F_contig12116.1835.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3207bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12116:167..3373+ (Hapterophycus canaliculatus Oshoro5f female)
AAGGTTCCTGTCGGGGGTTACGGCGAGGACCAAAACCTCCGCTACCTGGT GATGAGCAGGCTCGGGCCCGACGTGGAGGCCGCGCAAGGGAAGGGGGAGG CCTGGTCGCTGGCTCAGAAAGCCGGATACGCGAGGCAGATGCTCGCCCTC CTGCGTACCCTGCACGAGAAGTGCAAGATGGTTTTTGTTGACGTCAAGCC AGGTGTGTACATGAGAGAGGGAGGGCCACGGAGCAACACGAGGGGATTTT CCGCCAAGCATGATTGGGTCGGGAGGGCCACGGGAAATCAGCGAGGCATC GCAAAGGCGGTTTCGTGTTCGAGGGAGGGGGGCGCCTCTAGCTTGGACGC ATCGCTTCATTAGGGTCCGTGTCCATTTTTTGTGTGGAGTGGGGAGAAAG AGGCTGGTCTCTTTTTTGTCTTTGAACGGAAACGAACAAAAAAACCCTCC ATCGCAAGCTGATACCCTGCGAACTCTGCATGGTCGCGAGCAAAGCCACT CGTTGCTGTTGCGTTTCAGGAGCGACCTTAATGCGCACGCAAGGAGAAAT GCACACGTGCAGCGGCAGGAGCAGCACTGTCGCCATGATCGATAATACTG AAGAAATGAATCGAAGCAGCTCCACTCATTTTGCCAACCCAACATCATCA CACCCCGCCACCCTCTGCTGCCGCCGCCTTCCCTTCCCTCGCAGAGAACT TCATGTTTGGGCTGGCGGGCTCTGCTAATGAGGACAAGATTTTTCTTATC GACTTCGGACTGAGCTCTAGGTCAGCCGATCATTCGGGGCGTGCGTCGAT TGTGCTTTTTGCCCGCGCTCATTTTGGGCGCTCTTTCGCGGACCGCACAT CGGCAACCTTTGCGTCCAGGCGTCCAGGCATGCTTCAATTTTTTGCATTG TGCAGCGGAGGATGAAGCACGCATGAAGACGCTCGCCCGCTTTCCAACAC CTTCTGGGTGCCGTCGGCCGATCATCCCGCTGGTTGACCTTGACTGGTTT CCGTTGGGGCAATGGCAGTACTTGGAACAGGCCGTCATTGTTGCAAGTCA CGAGAAGCCACTCGCGTACCTAGAATTTTCTGCGCCATGCGAAGCGAGCT TAGTTTTACGCCGTTCGCAAGAACCTCGACCCTTCTTGGATCGAGAACAC CTTCATCCTTCGGGATGCCACTGGAGCAAAACGTAACCGAGCTGCCGAAA GCGACAGTTTTACGTGTATAGATAGATGGACAGCGCTGGAAAGCATCGGA TGGTTCGGGTCAGAACCAACTCGAATGCATGTGAACGATGTTGGAATATA AATCACTCAAGCTCTTGAAATGAATTCGTGGTTGCCCCCATACAAGGAAG ACTATCCTCTCTTGGTGTTTGGGCAGGTATACCGGGCCAGGCGGAACAAT TAAGCCGCAGGAGCAACGCGCTCAGGTCCAGGGCACCCCGGAGTTCCTGT CCCTCAAATGCCATGGCGGTGCCAGTGCTGGAAGGTGGGAGATCGATCAG CGCCACACACTGATCATGAAGATACAGTCGAGAAGAAGGAAACGTAAACC GTTGAATGGGGATGATGCCCAAGCTGCCGCTTGAAGGAAGCGCTTGTTGG AGAGTTGAAGAGAGAGCGATGCGTTCTGCGCGTTGCCACTTCCTCGACTT GCCCTCGCTAATTTAAGAATTTATCTTGCGCTTATGCGGTTCTGCTCCTG CTACTCATGCCCCACGTGCATGTGTCTCATTCGTTGTACTACAATCTTGC TTATCGTTTCGCGCGCCTCGTTTTATCGTGGCTGCTGCAATACGTCCTCT CGCCTGTCCCTTTCTGAACTTTGATACTTGTAATTCCCAGCTGGCAATTC CTTCCGTGATTTTTTTTTTTCCCGGATGAACACGTACCTGGTAGGTGCGA CGACCTCGAATCTCTTGGCTACGTGATCGTTTCCATGCTGAAGGAGGGGT CCACCGTCCTCCCCTGGAGCGGTTCGACGAGCGTCGCAAGTGGCCTCGCT GTCAAGAAATCCACCACGCTCGAAGCCCTTTGCCAGGGCTGCCCCTCGGG CATGCTTAGATACATGGAGGCAGTGCGCGGGATGAAGCACGAAGAAGAGC CGGACTACGACGGGCTTGATGCCATGCTCAAGTCGATGCAGAGCTCAGCG GCGGCAGCAGAGCCAGCAAGAAGAGGCTCGAAGGCCGTGAAAGGAAAGCC GAAGGCAACTGGCGGCGGCGGCGGCAGCGGCAAGAGCGCTTCGGCCCGCG GAGCATCAACAAAAACTGTCGCGAAGAAGAAATCTGCTAAGGCAACCGAG GCTCAAGAAGAGGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAAGCGGT GGAGGTGTGTGAGGTTGAGAAGAAGGGGAAGGGGCGGGCGGCCAGGGCGC AAAGGGGCTCGACGGTGGTGGCGGCGGCTGCGAAGGTGCCCGCGACGCCC GTGACCAACGGGAAGCGCGCCACGCCGGCGGTCAGGCGGAGCGGGCGGCT GTCGTCGCCGAGAGACGAAAAGTTCTTCGACGCGCTGCAAGAACATGGTA GCAACAAGAAGGACCAGGAGGAGGAAGAAGAGGAGGAAGAGCCTATGGTG ACGAAGGTGGTGAAAGGGGCAGCCAAAAGGACCGCCAGAGGCACAGCCAC GACGGCCCGGGCCGCTTCTAAGGCTACGGTCAAGTCGAAGGCGGTCTTTC TCCTTGAGGTGGGGATGAGTGTGTCGCGGTATGCGTGACGGAATAGCTCA GCAAGTGTCAGCGTTCGTCAGAATGGATGGCTCCCGTGTGCTCCTTTTTT ACTCGACAGTATTGGGGCTCGGGTACAGAGACATCGGCTGGAGACGCCGA GGGATCCCTCCGTCGATGCGTGAAGCGCGGCTGCAGTAGCGGCCTCCGCG CCGCGACGTTGCCGTTGGAAACACTTTTTCTCGAAGTTCCATGTCTTTCA CGAGATTGAGCATTTGCAATACATCACAGAAGAAGCCCGTGTTCACGTGC CATCTAATCCTTGCAGTCCTGGACTGCACACATCGGGACCCCACTCGGCG TTCGTCGCGCTCTGCGTTCATGCAGGTTCTCGCAGGACCTCACAAGGGGG AGACGCTCCGGTTGAGCGCCGGGGGGGCAGAAGTCCGCGTGGGACGCAAC GCCCCGAGGAAGAACGGACTGCGGCTCGACGAAGACTTCGAGGTTTCGGA TAAGTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12116:167..3373+

>mRNA_H-canaliculatus_F_contig12116.1835.1 ID=mRNA_H-canaliculatus_F_contig12116.1835.1|Name=mRNA_H-canaliculatus_F_contig12116.1835.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2544bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12116:167..3373+ (Hapterophycus canaliculatus Oshoro5f female)
AAGGTTCCTGTCGGGGGTTACGGCGAGGACCAAAACCTCCGCTACCTGGT
GATGAGCAGGCTCGGGCCCGACGTGGAGGCCGCGCAAGGGAAGGGGGAGG
CCTGGTCGCTGGCTCAGAAAGCCGGATACGCGAGGCAGATGCTCGCCCTC
CTGCGTACCCTGCACGAGAAGTGCAAGATGGTTTTTGTTGACGTCAAGCC
AGAAGGTTCCTGTCGGGGGTTACGGCGAGGACCAAAACCTCCGCTACCTG
GTGATGAGCAGGCTCGGGCCCGACGTGGAGGCCGCGCAAGGGAAGGGGGA
GGCCTGGTCGCTGGCTCAGAAAGCCGGATACGCGAGGCAGATGCTCGCCC
TCCTGCGTACCCTGCACGAGAAGTGCAAGATGGTTTTTGTTGACGTCAAG
CCAGAGAACTTCATGTTTGGGCTGGCGGGCTCTGCTAATGAGGACAAGAT
TTTTCTTATCGACTTCGGACTGAGCTCTAGAGAACTTCATGTTTGGGCTG
GCGGGCTCTGCTAATGAGGACAAGATTTTTCTTATCGACTTCGGACTGAG
CTCTAGGTATACCGGGCCAGGCGGAACAATTAAGCCGCAGGAGCAACGCG
CTCAGGTCCAGGGCACCCCGGAGTTCCTGTCCCTCAAATGCCATGGCGGT
GCCAGTGCTGGAAGGTATACCGGGCCAGGCGGAACAATTAAGCCGCAGGA
GCAACGCGCTCAGGTCCAGGGCACCCCGGAGTTCCTGTCCCTCAAATGCC
ATGGCGGTGCCAGTGCTGGAAGGTGCGACGACCTCGAATCTCTTGGCTAC
GTGATCGTTTCCATGCTGAAGGAGGGGTCCACCGTCCTCCCCTGGAGCGG
TTCGACGAGCGTCGCAAGTGGCCTCGCTGTCAAGAAATCCACCACGCTCG
AAGCCCTTTGCCAGGGCTGCCCCTCGGGCATGCTTAGATACATGGAGGCA
GTGCGCGGGATGAAGCACGAAGAAGAGCCGGACTACGACGGGCTTGATGC
CATGCTCAAGTCGATGCAGAGCTCAGCGGCGGCAGCAGAGCCAGCAAGAA
GAGGCTCGAAGGCCGTGAAAGGAAAGCCGAAGGCAACTGGCGGCGGCGGC
GGCAGCGGCAAGAGCGCTTCGGCCCGCGGAGCATCAACAAAAACTGTGCG
ACGACCTCGAATCTCTTGGCTACGTGATCGTTTCCATGCTGAAGGAGGGG
TCCACCGTCCTCCCCTGGAGCGGTTCGACGAGCGTCGCAAGTGGCCTCGC
TGTCAAGAAATCCACCACGCTCGAAGCCCTTTGCCAGGGCTGCCCCTCGG
GCATGCTTAGATACATGGAGGCAGTGCGCGGGATGAAGCACGAAGAAGAG
CCGGACTACGACGGGCTTGATGCCATGCTCAAGTCGATGCAGAGCTCAGC
GGCGGCAGCAGAGCCAGCAAGAAGAGGCTCGAAGGCCGTGAAAGGAAAGC
CGAAGGCAACTGGCGGCGGCGGCGGCAGCGGCAAGAGCGCTTCGGCCCGC
GGAGCATCAACAAAAACTGAGGAGGAGGAGGAGGAAGCGGTGGAGGTGTG
TGAGGTTGAGAAGAAGGGGAAGGGGCGGGCGGCCAGGGCGCAAAGGGGCT
CGACGGTGGTGGCGGCGGCTGCGAAGGTGCCCGCGACGCCCGTGACCAAC
GGGAAGCGCGCCACGCCGGCGGTCAGGCGGAGCGGGCGGCTGTCGTCGCC
GAGAGACGAAAAGTTCTTCGACGCGCTGCAAGAACATGGTAGCAACAAGA
AGGACCAGGAGGAGGAAGAAGAGGAGGAAGAGCCTATGGTGACGAAGGTG
GTGAAAGGGGCAGCCAAAAGGACCGCCAGAGGCACAGCCACGACGGCCCG
GGCCGCTTCTAAGGCTACGGTCAAGTCGAAGGCGGTCTTTCTCCTTGAGG
AGGAGGAGGAGGAGGAAGCGGTGGAGGTGTGTGAGGTTGAGAAGAAGGGG
AAGGGGCGGGCGGCCAGGGCGCAAAGGGGCTCGACGGTGGTGGCGGCGGC
TGCGAAGGTGCCCGCGACGCCCGTGACCAACGGGAAGCGCGCCACGCCGG
CGGTCAGGCGGAGCGGGCGGCTGTCGTCGCCGAGAGACGAAAAGTTCTTC
GACGCGCTGCAAGAACATGGTAGCAACAAGAAGGACCAGGAGGAGGAAGA
AGAGGAGGAAGAGCCTATGGTGACGAAGGTGGTGAAAGGGGCAGCCAAAA
GGACCGCCAGAGGCACAGCCACGACGGCCCGGGCCGCTTCTAAGGCTACG
GTCAAGTCGAAGGCGGTCTTTCTCCTTGAGGTTCTCGCAGGACCTCACAA
GGGGGAGACGCTCCGGTTGAGCGCCGGGGGGGCAGAAGTCCGCGTGGGAC
GCAACGCCCCGAGGAAGAACGGACTGCGGCTCGACGAAGACTTCGAGGTT
TCGGATAAGTAAGTTCTCGCAGGACCTCACAAGGGGGAGACGCTCCGGTT
GAGCGCCGGGGGGGCAGAAGTCCGCGTGGGACGCAACGCCCCGAGGAAGA
ACGGACTGCGGCTCGACGAAGACTTCGAGGTTTCGGATAAGTAA
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