mRNA_H-canaliculatus_F_contig121.1822.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig121.1822.1
Unique NamemRNA_H-canaliculatus_F_contig121.1822.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig121.1822.1 vs. uniprot
Match: A0A6H5KHX6_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX6_9PHAE)

HSP 1 Score: 546 bits (1406), Expect = 3.680e-187
Identity = 273/356 (76.69%), Postives = 301/356 (84.55%), Query Frame = 1 
Query:   22 MAPCARLCLPVLLFAVSFSEGFVLPFSAPRSGGGTRSRGCDGVPTAATPSFRRRVAASHHVHQRRRPDSSLSVLGPDGKEIDIIRHREAYSYSEYWDDFYAGGEAGSLKDGEAYDWFFGYARLAVHLNLHVGGARAGRVLVLGCGNSEVSPLMWENGWKNIVSIDFCSPVIEAMQKVHSDKAGMEWKVMDARDMSAFDTGSFDAVIDKGMTDSVMFNDNFATMMAKVSFEVARVLKPGGVYLLTDYRDPERVQELFERDEWESGSLTHEGKITPKVHLFKGKRSETIAQAPDFLDELIEEVEGEAVSGEVLQGTP-EDSQEWLTDAIAQGAVSIPDEGPEDEVPHKDVGQDKPFKF 1086
            MAP +RLC+P LL AVS   GF+LP S P + G  R RGC+G+PT      R   A+S H + R R DS  S LGPDGKEIDIIRHREAYSY+EYWD+FYAGGEAGSLKDGE+YDWFFGY+RLAV+LNLHVGGARAGRVLVLGCGNSEVSP MWENGWK+IVSIDFC+PVIEAMQ  H+DK GMEWKVMDARDM+  +TGSFDAVIDKG+TDSVM+ND F+ MMAKVS+EVARVLKPGGVYL+ DYRDPER+QELFERDEWE GSLT EGKIT KVHLFKGKRS    Q PDFL+ELIEEVEG+ V GEVL+  P EDSQEWL DAIAQG +SIPDEGP DEVPHKDVGQDKPFKF
Sbjct:    1 MAPGSRLCVPALLAAVSCVGGFILPSSGPTNRGTLRKRGCNGLPTV-----RGSPASSAHDYCRPRRDSRRSALGPDGKEIDIIRHREAYSYAEYWDEFYAGGEAGSLKDGESYDWFFGYSRLAVYLNLHVGGARAGRVLVLGCGNSEVSPKMWENGWKDIVSIDFCNPVIEAMQSAHADKPGMEWKVMDARDMAELETGSFDAVIDKGLTDSVMYNDKFSVMMAKVSYEVARVLKPGGVYLMADYRDPERIQELFERDEWEGGSLTQEGKITSKVHLFKGKRSSVEPQTPDFLEELIEEVEGD-VQGEVLEAIPQEDSQEWLVDAIAQGTISIPDEGPVDEVPHKDVGQDKPFKF 350
[Close]
BLAST of mRNA_H-canaliculatus_F_contig121.1822.1 vs. uniprot
Match: D7G816_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G816_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 5.870e-110
Identity = 168/204 (82.35%), Postives = 183/204 (89.71%), Query Frame = 1 
Query:  478 MWENGWKNIVSIDFCSPVIEAMQKVHSDKAGMEWKVMDARDMSAFDTGSFDAVIDKGMTDSVMFNDNFATMMAKVSFEVARVLKPGGVYLLTDYRDPERVQELFERDEWESGSLTHEGKITPKVHLFKGKRSETIAQAPDFLDELIEEVEGEAVSGEVLQGTP-EDSQEWLTDAIAQGAVSIPDEGPEDEVPHKDVGQDKPFKF 1086
            MWENGWK+IVSIDFC+PVIEAMQ  H+DK GMEWKVMDARDM  F+TGSFDAVIDKG+TDSVM+ND F+ MMAKVS+EVARVLKPGGVYL+TDYRDPERVQELFERDEWESGSLT EGKIT KVHLFKGKRS    Q PDFL+ELIEEVEG+ V GEVL+ +P EDSQEWL DAIAQG ++IPDEGP DEVPHKDVGQDKPFKF
Sbjct:    1 MWENGWKDIVSIDFCNPVIEAMQSAHADKPGMEWKVMDARDMVEFETGSFDAVIDKGLTDSVMYNDKFSVMMAKVSYEVARVLKPGGVYLMTDYRDPERVQELFERDEWESGSLTQEGKITSKVHLFKGKRSSVEPQTPDFLEELIEEVEGD-VQGEVLEASPQEDSQEWLADAIAQGTITIPDEGPADEVPHKDVGQDKPFKF 203
[Close]
BLAST of mRNA_H-canaliculatus_F_contig121.1822.1 vs. uniprot
Match: A0A835YJ55_9STRA (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ55_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.840e-49
Identity = 92/211 (43.60%), Postives = 125/211 (59.24%), Query Frame = 1 
Query:  238 VLGPDGKEIDIIRHREAYSYSEYWDDFYAGGEAGSLKDGEAYDWFFGYARLAVHLNLHVGGAR--AGRVLVLGCGNSEVSPLMWENGWKNIVSIDFCSPVIEAMQKVHSDKAGMEWKVMDARDMSAFDTGSFDAVIDKGMTDSVMFNDNFATMMAKVSFEVARVLKPGGVYLLTDYRDPERVQELFERDEWESGSLTHEGKITPKVHLFKG 864
              G   ++ D    R+ YS  E+WD FY   + G  + GE YDWF GY ++   L  H   AR  AG VL+LGCGNSE+S  M+++GW   ++IDF  PVI+ M+  H+DK GMEW VMDARDMS    GS   VIDKG+ D++  +D +   + KV  E ARVL+PGG Y+ T +  PE +  L   + W+S  +   G +TP V L+ G
Sbjct:   10 TAGSAEEQRDYFLSRQQYSLREFWDAFYTPYDEGESEAGETYDWFLGYPKMREALLEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLLSNNAWQSEGVECRGNLTPTVLLYVG 220
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BLAST of mRNA_H-canaliculatus_F_contig121.1822.1 vs. uniprot
Match: A0A0D6R812_ARACU (Methyltransf_11 domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R812_ARACU)

HSP 1 Score: 128 bits (321), Expect = 4.800e-30
Identity = 74/175 (42.29%), Postives = 107/175 (61.14%), Query Frame = 1 
Query:  283 EAYSYSEYWDDFYAGGEAGSLKDGEAYDWFFGYARLAVHLNLHVGGARAGRVLVLGCGNSEVSPLMWENGWKNIVSIDFCSPVIEAMQKVHSDKAGMEWKVMDARDMSAFDTGSFDAVIDKGMTDSVMFNDNFATMMAKVSFEVARVLKPGGVYLLTDYRDPE-RVQELFERDEW 804
            +AY  + YWD+ Y        +D  A+DW+  ++ L   L+L++   +  R+L++GCGN+ +S  M  +G++ IV+ID  S VIEAMQK + D   + +  MD RDMSAF++ SFD+VIDKGM DS+M   N      K+  EV RVLKPGGVY+L  Y  P  R+  L  ++ W
Sbjct:   21 QAYGEAAYWDNRYR-------QDNGAFDWYQQFSGLVPLLHLYI--PKRHRILMVGCGNAVLSEDMVNDGYEEIVNIDISSVVIEAMQKKYQDYPQLIYATMDVRDMSAFESSSFDSVIDKGMLDSLMCGHNAQQSARKMLDEVRRVLKPGGVYMLVTYGGPHVRMPHLKAQELW 186
[Close]
BLAST of mRNA_H-canaliculatus_F_contig121.1822.1 vs. uniprot
Match: A0A059B5Q4_EUCGR (Methyltransf_11 domain-containing protein n=3 Tax=Myrtoideae TaxID=1699513 RepID=A0A059B5Q4_EUCGR)

HSP 1 Score: 127 bits (319), Expect = 1.660e-29
Identity = 91/229 (39.74%), Postives = 124/229 (54.15%), Query Frame = 1 
Query:  283 EAYSYSEYWDDFYAGGEAGSLKDGEAYDWFFGYARLAVHLNLHVGGARAGRVLVLGCGNSEVSPLMWENGWKNIVSIDFCSPVIEAMQKVHSDKAGMEWKVMDARDMSAFDTGSFDAVIDKGMTDSVMFNDNFATMMAKVSFEVARVLKPGGVYLLTDYRDPE-RVQELFERDEWESGSLTHEGKITPKVHLFKGKRSETIAQAPDFLDELIEEV--EGEAVSGEVLQG 960
            +AY    YWD  Y         D  A+DW+  Y+ LA  +NL+V   R  RVLV+GCGNSE S  M ++G++++V+ID  S VIEAMQK +S++  +++  MD R+MS FD+ SF+AVIDKG  DS++   N     AK+  EV RVLK  GVY+L  Y  P  R+  L E   W           T K+H+      E +    D L EL   +  + E  S E L G
Sbjct:   12 QAYGEPWYWDRRYE-------TDSGAFDWYQKYSALAPLVNLYV--PREDRVLVVGCGNSEFSEGMVDDGYEDVVNIDISSVVIEAMQKKYSNRPQLKYMKMDVREMSGFDSHSFNAVIDKGTLDSLLCGHNSRQNAAKMLEEVGRVLKDKGVYILITYGAPTYRLNLLKEMGSW-----------TIKLHVI-----EKLVGKSDHLWELTNPLPLDNEGSSAETLLG 215
[Close]
BLAST of mRNA_H-canaliculatus_F_contig121.1822.1 vs. uniprot
Match: V4NNW0_EUTSA (Methyltransf_11 domain-containing protein n=5 Tax=Brassicaceae TaxID=3700 RepID=V4NNW0_EUTSA)

HSP 1 Score: 125 bits (313), Expect = 1.330e-28
Identity = 80/200 (40.00%), Postives = 114/200 (57.00%), Query Frame = 1 
Query:  283 EAYSYSEYWDDFYAGGEAGSLKDGEAYDWFFGYARLAVHLNLHVGGARAGRVLVLGCGNSEVSPLMWENGWKNIVSIDFCSPVIEAMQKVHSDKAGMEWKVMDARDMSAFDTGSFDAVIDKGMTDSVMFNDNFATMMAKVSFEVARVLKPGGVYLLTDYRDPERVQELFERD-EWESG------SLTHEGKITPKVHLFK 861
            ++YS   YWDD Y+        + E +DW+  Y+ LA  +NL+V   R   VLV+GCGNS  S  M ++G++++V+ID  S VI++M K +SD+  +++  MD RDM AF++ SFDAVIDKG  DS++   N      ++  EV RVLK  GVY+L  Y  P     LF+    W +       SLT +   TPK  L K
Sbjct:    8 QSYSEQWYWDDRYS-------NESEPFDWYQKYSALAPLINLYVP-RRNHPVLVIGCGNSAFSEGMVDDGYEDVVNIDISSVVIDSMIKKYSDRPQLKYLKMDVRDMKAFESDSFDAVIDKGTLDSILCGSNSRQYSTQMLEEVWRVLKDKGVYILITYGAPNYRLRLFKESCSWTTKLHVIDKSLTEQPLETPKWELTK 199
[Close]
BLAST of mRNA_H-canaliculatus_F_contig121.1822.1 vs. uniprot
Match: A0A067K6U1_JATCU (Methyltransf_11 domain-containing protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067K6U1_JATCU)

HSP 1 Score: 125 bits (315), Expect = 1.480e-28
Identity = 81/205 (39.51%), Postives = 115/205 (56.10%), Query Frame = 1 
Query:  283 EAYSYSEYWDDFYAGGEAGSLKDGEAYDWFFGYARLAVHLNLHVGGARAGRVLVLGCGNSEVSPLMWENGWKNIVSIDFCSPVIEAMQKVHSDKAGMEWKVMDARDMSAFDTGSFDAVIDKGMTDSVMFNDNFATMMAKVSFEVARVLKPGGVYLLTDYRDP-ERVQELFERDEWESGSLTHEGKITPKVHLFKGKRSETIAQAP 894
            +AY    YWD+ YA   A        +DW+  YA LA  +NL++      RVLV+GCGNS  S  M ++G++++V++D  S VI AMQ  +S++  +++  MD RDMSAF TGSFDAVIDKG  DS+M  +  A  M +   E  RVLK  GVY+L  Y  P  R++ L E   W +           K+H+ +   S  ++Q P
Sbjct:   15 QAYGEPSYWDNRYANESA-------PFDWYQKYASLAPVINLYIPRHLNPRVLVIGCGNSAFSEGMVDDGYEDVVNVDISSVVINAMQNKYSNRPQLKYIQMDVRDMSAFQTGSFDAVIDKGTLDSIMCGEQNAVSMLE---ETWRVLKDKGVYILITYGTPASRLRLLKESCLWRT-----------KLHVIEKLLSGRVSQHP 198
[Close]
BLAST of mRNA_H-canaliculatus_F_contig121.1822.1 vs. uniprot
Match: A0A5J9U7X1_9POAL (Methyltransf_11 domain-containing protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9U7X1_9POAL)

HSP 1 Score: 125 bits (313), Expect = 2.150e-28
Identity = 72/169 (42.60%), Postives = 104/169 (61.54%), Query Frame = 1 
Query:  274 RHREAYSYSEYWDDFYAGGEAGSLKDGEAYDWFFGYARLAVHLNLHVGGARAGRVLVLGCGNSEVSPLMWENGWKNIVSIDFCSPVIEAMQKVHSDKAGMEWKVMDARDMSAFDTGSFDAVIDKGMTDSVMFNDNFATMMAKVSFEVARVLKPGGVYLLTDYRDP-ERV 777
            R    Y  + YWD  Y+ G + +  DGE +DW+  Y+ L   L  HV  +   RVL+LGCGNS +S  M ++G+++IV+ID  S VIE M++ H++   + +  MD RDMS FD  SFD V+DKG  D++M  D+     +K+  EVAR+L+P G+YLL  Y  P ER+
Sbjct:    6 RKSNDYGAAAYWDARYSSGSSPAGGDGEFFDWYQKYSALRPLLRAHVPASS--RVLMLGCGNSLLSEDMAKDGYQDIVNIDISSVVIEQMREKHAEIKQLTYMQMDVRDMSLFDDESFDCVLDKGTLDAMMCADDTPHGASKMLAEVARLLRPRGIYLLITYGAPKERI 172
[Close]
BLAST of mRNA_H-canaliculatus_F_contig121.1822.1 vs. uniprot
Match: A0A843WVK7_COLES (Methyltransf_11 domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843WVK7_COLES)

HSP 1 Score: 126 bits (316), Expect = 3.180e-28
Identity = 74/173 (42.77%), Postives = 102/173 (58.96%), Query Frame = 1 
Query:  286 AYSYSEYWDDFYAGGEAGSLKDGEAYDWFFGYARLAVHLNLHVGGARAGRVLVLGCGNSEVSPLMWENGWKNIVSIDFCSPVIEAMQKVHSDKAGMEWKVMDARDMSAFDTGSFDAVIDKGMTDSVMFNDNFATMMAKVSFEVARVLKPGGVYLLTDYRDPERVQELFERDEW 804
            AY  + YWD  Y        +D   +DW+  YA L   L+L++G +R  RVL++GCGNS +   M ++G+K++V+ID  S VIEAMQK + D+  M +  MD RDMS F++ SFD VIDKG  DS+M   N      K+  EV R+LK  GVY+L  Y DP+    L +   W
Sbjct:   92 AYGEASYWDQRYR-------QDQGPFDWYQKYAALRPLLDLYLGRSR--RVLLVGCGNSVLGEEMIDDGYKDVVNIDISSVVIEAMQKKYLDRPEMNYIKMDVRDMSIFESNSFDGVIDKGTLDSLMCGHNAQQNATKMLEEVDRILKDKGVYILITYGDPKYRLYLLKALSW 255
[Close]
BLAST of mRNA_H-canaliculatus_F_contig121.1822.1 vs. uniprot
Match: A0A6A1VLL0_9ROSI (Methyltransferase-like protein 13 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VLL0_9ROSI)

HSP 1 Score: 124 bits (310), Expect = 3.360e-28
Identity = 73/163 (44.79%), Postives = 100/163 (61.35%), Query Frame = 1 
Query:  283 EAYSYSEYWDDFYAGGEAGSLKDGEAYDWFFGYARLAVHLNLHVGGA-RAGRVLVLGCGNSEVSPLMWENGWKNIVSIDFCSPVIEAMQKVHSDKAGMEWKVMDARDMSAFDTGSFDAVIDKGMTDSVMFNDNFATMMAKVSFEVARVLKPGGVYLLTDYRDP 768
            +AY  + YWD  YA        +   +DW+  Y+ LA  +NL++  + R   VLV+GCGNS  S  M ++G+  +V+ID  S VIEAMQK +S+++ + +K MD RDMS F TGSF+AVIDKG  DS++  DN      K+  EV RVLK  GVY+L  Y  P
Sbjct:    7 QAYGEAWYWDKRYA-------DESGPFDWYQKYSSLAPLINLYIPRSHRQNPVLVVGCGNSAFSEGMVDDGYAEVVNIDISSVVIEAMQKKYSNRSQLIYKNMDVRDMSYFQTGSFEAVIDKGTLDSLLCGDNSRQNAVKMLEEVWRVLKEKGVYILVTYGAP 162
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig121.1822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHX6_9PHAE3.680e-18776.69Methyltransf_11 domain-containing protein n=1 Tax=... [more]
D7G816_ECTSI5.870e-11082.35Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A835YJ55_9STRA1.840e-4943.60S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A0D6R812_ARACU4.800e-3042.29Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A059B5Q4_EUCGR1.660e-2939.74Methyltransf_11 domain-containing protein n=3 Tax=... [more]
V4NNW0_EUTSA1.330e-2840.00Methyltransf_11 domain-containing protein n=5 Tax=... [more]
A0A067K6U1_JATCU1.480e-2839.51Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A5J9U7X1_9POAL2.150e-2842.60Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A843WVK7_COLES3.180e-2842.77Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A6A1VLL0_9ROSI3.360e-2844.79Methyltransferase-like protein 13 n=1 Tax=Morella ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig121contigH-canaliculatus_F_contig121:47079..52536 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score344.7
Seed ortholog evalue5e-92
Seed eggNOG ortholog2880.D7G816
EggNOG free text desc.methyltransferase activity
EggNOG OGsKOG2352@1,KOG2352@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionMethyltransferase type 11
Ec32 orthologEc-06_009800.1
Exons6
Model size2318
Cds size1068
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig121.1822.1prot_H-canaliculatus_F_contig121.1822.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig121 48308..52515 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928923.330563-UTR-H-canaliculatus_F_contig121:47078..483071622928923.330563-UTR-H-canaliculatus_F_contig121:47078..48307Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig121 47079..48307 -
1696845613.9825647-UTR-H-canaliculatus_F_contig121:47078..483071696845613.9825647-UTR-H-canaliculatus_F_contig121:47078..48307Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig121 47079..48307 -
1622928923.4376261-UTR-H-canaliculatus_F_contig121:52515..525361622928923.4376261-UTR-H-canaliculatus_F_contig121:52515..52536Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig121 52516..52536 -
1696845614.066243-UTR-H-canaliculatus_F_contig121:52515..525361696845614.066243-UTR-H-canaliculatus_F_contig121:52515..52536Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig121 52516..52536 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928923.34895-CDS-H-canaliculatus_F_contig121:48307..485751622928923.34895-CDS-H-canaliculatus_F_contig121:48307..48575Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig121 48308..48575 -
1696845614.0006433-CDS-H-canaliculatus_F_contig121:48307..485751696845614.0006433-CDS-H-canaliculatus_F_contig121:48307..48575Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig121 48308..48575 -
1622928923.3650014-CDS-H-canaliculatus_F_contig121:48866..489881622928923.3650014-CDS-H-canaliculatus_F_contig121:48866..48988Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig121 48867..48988 -
1696845614.0125918-CDS-H-canaliculatus_F_contig121:48866..489881696845614.0125918-CDS-H-canaliculatus_F_contig121:48866..48988Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig121 48867..48988 -
1622928923.381841-CDS-H-canaliculatus_F_contig121:49436..495531622928923.381841-CDS-H-canaliculatus_F_contig121:49436..49553Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig121 49437..49553 -
1696845614.0236094-CDS-H-canaliculatus_F_contig121:49436..495531696845614.0236094-CDS-H-canaliculatus_F_contig121:49436..49553Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig121 49437..49553 -
1622928923.3960166-CDS-H-canaliculatus_F_contig121:50095..501801622928923.3960166-CDS-H-canaliculatus_F_contig121:50095..50180Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig121 50096..50180 -
1696845614.033167-CDS-H-canaliculatus_F_contig121:50095..501801696845614.033167-CDS-H-canaliculatus_F_contig121:50095..50180Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig121 50096..50180 -
1622928923.4096596-CDS-H-canaliculatus_F_contig121:50817..509881622928923.4096596-CDS-H-canaliculatus_F_contig121:50817..50988Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig121 50818..50988 -
1696845614.0447583-CDS-H-canaliculatus_F_contig121:50817..509881696845614.0447583-CDS-H-canaliculatus_F_contig121:50817..50988Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig121 50818..50988 -
1622928923.4235249-CDS-H-canaliculatus_F_contig121:52210..525151622928923.4235249-CDS-H-canaliculatus_F_contig121:52210..52515Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig121 52211..52515 -
1696845614.052779-CDS-H-canaliculatus_F_contig121:52210..525151696845614.052779-CDS-H-canaliculatus_F_contig121:52210..52515Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig121 52211..52515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig121.1822.1

>prot_H-canaliculatus_F_contig121.1822.1 ID=prot_H-canaliculatus_F_contig121.1822.1|Name=mRNA_H-canaliculatus_F_contig121.1822.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=356bp
MAPCARLCLPVLLFAVSFSEGFVLPFSAPRSGGGTRSRGCDGVPTAATPS
FRRRVAASHHVHQRRRPDSSLSVLGPDGKEIDIIRHREAYSYSEYWDDFY
AGGEAGSLKDGEAYDWFFGYARLAVHLNLHVGGARAGRVLVLGCGNSEVS
PLMWENGWKNIVSIDFCSPVIEAMQKVHSDKAGMEWKVMDARDMSAFDTG
SFDAVIDKGMTDSVMFNDNFATMMAKVSFEVARVLKPGGVYLLTDYRDPE
RVQELFERDEWESGSLTHEGKITPKVHLFKGKRSETIAQAPDFLDELIEE
VEGEAVSGEVLQGTPEDSQEWLTDAIAQGAVSIPDEGPEDEVPHKDVGQD
KPFKF*
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mRNA from alignment at H-canaliculatus_F_contig121:47079..52536-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig121.1822.1 ID=mRNA_H-canaliculatus_F_contig121.1822.1|Name=mRNA_H-canaliculatus_F_contig121.1822.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5458bp|location=Sequence derived from alignment at H-canaliculatus_F_contig121:47079..52536- (Hapterophycus canaliculatus Oshoro5f female)
CAGCTTAGGTTCAAGAACACCATGGCTCCGTGCGCCAGGCTTTGCTTGCC
TGTCTTGCTCTTTGCCGTATCGTTTTCAGAAGGGTTTGTTCTTCCATTTT
CAGCTCCCAGGAGCGGCGGTGGAACTCGAAGTCGCGGCTGCGATGGCGTT
CCAACGGCAGCAACACCTTCTTTCCGGCGGCGGGTAGCTGCTTCCCATCA
TGTGCACCAACGACGTCGACCAGACTCGAGCCTGAGCGTGCTTGGGCCAG
ATGGAAAAGAAATTGATATCATCAGGCATCGAGAGGCGTACTCTTATTCC
GAATATTGGGACGATTTTTATGCTGGGTGAGTAGGGCGTGGTAGTTCAAC
ATAGAGATGCAAGTCTGAGGAGGTAGTCAGCTGACTCGAACCGTCCTGCG
TGTTGCTAGCGTCAACGGAGCATTCACAAGCCACCTGTGGCCTTGCAATC
GATTCTATGGACACCTGAATCCACTCTGCTGCTGTGGCATACCACAATCC
ACAACCTGCAACGGTGTTTTCGATACTTTTCGTTGAGCGTTTCAAGCGTC
GGTGTGTCTGTGTTGCGGACGCTGACCATACCTGTCTGGTTGATGATCAG
CCTGTAGGTCCTCTCGAACCTCGAAACAGGCCGCCGTGTAAAGCCCATGG
CCAGGGCGCAGCCTTCAGTTTCGATGGATTTTTGTGGCGAGCTCGTTGTA
CAGCCGAGCCATTAGACCGGGTGCTGGCTGGTATATCAAGGACACCTGCT
CGAGGAAAATACCACGTGGCTGATTCTGGCAGCAGAGCGCGTTTTTATGT
TGTGGTTGTGTTGTATAATTTCGGGGCGCCAAGAGGTTCCGCCGCTCACC
TCTGATCCTGATTCTCCCTTAAATCCTGCGTGCAGCTGCTCGTACCCGTG
GGTAAAACCCTCTTGTTTGTTTGTTGCACACGGCATATCCACACGGCCGG
GATGCGCTTCAGACCTTTTCTGTGTGATTTCCAGTATTTCCGCTATCAAT
ACGTTTTCCTCGCGCTGTACGAGTATCATGGTGGATTCAAATTGCGCCCA
CGAAAGCTAACTCAAAGCTTTGCGTAGATTAGATATGTAGGTCTTCACCC
TTCGACTGGCGTGAAATATTGGGCAAACTCCATCGTGCAGTCGTTCAAGT
TTCAACTTCGAGTAGAAACGCGGCTTTGAAGGGAAGTGTAGCGGCATTCT
CGACGGGCTCCTCAAGTTGGGCGTATGCTGTTGTTCGCTCCCCGTCAGCT
TTCAGACTTTCCTAAAATGCGGCGTGTTTCATGGCAACTTGGCAACCTTC
GTGCACGCGCAACCGGTACAGGGGCGGCTCGATTGTTTCAAAACCTTCAG
CGGGAAAAGGGCCGGGAAGGGTTTCTGTCTTGGACGTCGGCGATTCGCTG
CCGGGCCCTCACGATGTCACCTAAGTTGTCCCTGAAAAACTGACACAAGT
GTGCAAGTGGTAAAGAGCTCGGAAGACTGAAACCTGTTTGCCGTGCTGCG
TGCACACACTGTTTGCTCGAACACCGGGTGGTGGGCGTGGAAGTGCAGGG
GGGAGGCTGGCAGCCTCAAAGACGGGGAAGCGTACGATTGGTTCTTCGGA
TACGCGAGGCTGGCCGTGCACCTGAACCTTCACGTCGGCGGGGCGAGGGC
GGGGCGCGTGTTGGTGCTGGGTTGCGGCAACTCGGAAGTGTCGCCCCTGA
TGTGGGAGAACGGATGGAAGTGAGTGAGAGCAATCGAAGGCTCGCGCTGG
TGTCCAAGTGTTCGCTGGGTCGTAGCGGAAACTTCACTTGCTACAGTTTT
CGAAAGAAAAATACTTGAAGTCAACAGCGAAGGAAAAACTTTTTCTTATT
GTTGAGTTCGTTGTGGATGTCTTGTCGGACGGCCACTTCCGAAGAGTTGT
GCGGTTGTCCGGGTAAGAAAACGTCGGGAGCAAATCGGAGACACCGCAAG
GCACAGACATGGGAATAGATAGATCGATGCGTGCGGAAGATGGAACAACC
GCCTGAGTTCAAAAAGAAATCTCGCTTGCTTTCCTTAACTGGGCCCTTTG
CTCTGCGGTATGGGAACCCTCACACCGGTTTAACGAACCGATATGTTCGG
TCTCGCAAGCACGATGGCAAGGATGTTTGGACGAGCAGGTGGAACCAAAG
CCGGAACGGATATCAGTGGTAAGGAAGATATGTTGCGCTGACTGACCCCA
GATACAACGCGACGTACTCGCTCTACTCCGCGAGGCCCTAACCTCATTCT
CTCTCACTTGCTTCAGCGAGTGCTCAATTACCCTCCTCGGGTTTTTTTTT
TGTCCTCCTGGTCCTCTTGGTGATCCCATCGTGAATCCTCTTATCGTTGC
CCGCAGGAACATTGTCAGCATCGACTTCTGCAGCCCTGTGATCGAGGCGA
TGCAAAAGGTGCACAGCGACAAGGCCGGGATGGAGTGGAAGGTGCGACCC
CGTAACTTTCTCGTGTGGTAGCTTTCTCACGAATCACGAATCGTGTGATG
CGGCAGTCCCTTGAAACCCAACCGGAGAGAGGGCTCTGTTAGGTCGCTGT
TTTTTCGGAGTCGGATTCACTGGTGTCAGTGACGAAGGATCTGCCCCACG
TTTGCCGCGGCACCGCACGCCCAGAGATGTGCTTGCCTTCTGAGTGGGTG
CACGCCTTTGCTTGTGCGTCGAATGGCGATGGCCGAATCCGTACTAGTAG
ACCCGAGATTTCCATCGTGGAAGGCTTTGTACATGCTTCGACACTGAGAC
AGGACAAGTTGTCATCCGATCGTGATTGTGTCATTCGCTTTTGGTGTTTT
ATTTTTTTCGAAAAGGACTCACGTGAAAAGCGCCCGAGGAAGAAACGATC
GTCAAGGATTTGATCCACACTACAGGAAGAAAGCAGAAAATAAAAAGGCC
TAGACCCTGCCGATCAAACGGTTATTCAGTTCATGTCTCTAGCTTCCTCA
TCTTTTCGTGTTCTCCCTGTTTTCGTCTGGAAGGTGATGGATGCCAGGGA
CATGTCGGCGTTTGATACTGGCTCCTTCGACGCTGTGATCGACAAAGGGA
TGACTGACTCCGTAATGTTCAACGACAATTTTGCGACGATGATGGCGAAG
GTGAGTCACCTTACCGTCCTCGCTTACGATCGACCGGATCCCAGCGACTG
AAACGTCCGCATAATAAGAAGATGGCCGCTTCACAGGATACGTCACGGAG
GCCCCCCAGTCGCTTTGAAATGAACCAGCGAGCCATGCTGCGGTAGAGGT
ACGCCTTGTAGACCCATTCGCAGGCACCCTAATTTGAAGAGCCTCCGCGC
TTCTCGGCCGAAGCGGGTCCGTGTACACATTTTTTTTACCTGGATGTCTT
TCGCCCGTCTTGACGAAAGCACCCCGAACGTGATTCTTCGAACCGATGAA
ACACAGCATTCCTAGGGCTTACATCTCGAGCAATCTGATGTGCTCCCTAT
CTTGGAGTAAATCCAGCATTGCCTGGAGATTCTGGTTTGACGCTTCCCTC
TGACAGATGAGTGATGATATCCGTGGTCGCAACTACCGTCGTCATCAGGT
TTCGTTCGAGGTGGCCCGCGTGCTGAAGCCGGGAGGAGTGTACCTGTTGA
CAGACTACAGAGATCCCGAACGGGTGCAGGAGCTGTTTGAGCGCGATGAG
TGGGAAAGCGGTTCACTGACGTGAGTGCCCACCACAACGGCGGAAAACTG
CGTTCTCAACGTAGAAAACTTGCGGGGACGTCCGAGTCACCCCCTCCCTC
CCTCCCTTTTTATTTCATTTTTTTCTCGATTTCGTATCGTTCTTGTTTGC
GGCGAGGAAGAACTTCTGAAGGGCTTTGTCGAAGACACGTCGCGCAGCGG
TTACGCCCTCTTTTTTCGTCGAGAGGTTCGCGCCATGGGTTGGCCCACCT
CCGCCTCTCTCCGCTGCCTCTCGTTCGTCGTCGGCGTGGACGCATTGCTC
TCTACTGACAGGCACGAGGGGAAGATCACCCCGAAGGTGCACCTCTTTAA
GGGGAAGCGATCTGAGACGATCGCTCAAGCTCCCGACTTCTTGGACGAGT
TGATAGAGGAGGTCGAGGGGGAAGCAGTCTCGGGAGAGGTGCTACAGGGG
ACGCCGGAAGACTCTCAGGAGTGGCTGACAGACGCGATTGCGCAGGGTGC
CGTAAGCATACCGGACGAAGGTCCCGAGGACGAGGTGCCGCACAAGGACG
TGGGCCAGGACAAGCCGTTCAAGTTTTGAGTCCAAACGCTCGGCGATGAA
GTTGACTTATGCGGGAGACTTGGATGTTGTTTTTGTCGTTTTGAAGTTGA
TGGCGTTTGACGAGCACCTGCTGTAACCCTGCGTTGGTCAGGGTGTGTTT
GCTGTGCTTGGTATCATTTGAGCGAGGACGGCACGAGACCGCGGAAGAAA
AGTGGTCTACAAGTAAAGAAAGTCTCGGACCCAAACAACGGCTTTGATAT
GAACGGAAATATTGGATATCAAGATTATCACTGATTCGACGTACCTTTCT
TTTCGAGAAGGCAGTCTTTGATAGCCGGCATTGACGGTCGATTTCTTTGT
TGTTGGATTGCTCGTTCCCGTGCAGCATAGGAACTGGCGAATTATTCAGC
ATTGGGGGGTAAGGCAGAGTGAGTTATTGTGCGCATCGAGGATTCACAAC
GATAGTGTACGTATTCCTGGCTCTTGGCGGTTTTAGATTGTACGGCTTAC
GGCGACACGCTTACGATTTGCGACCAAACTTCGAGCCCTCAATGGCATGC
CATTCTAATGAACGCCAGATCTTTCCGGCCAGAGCTGGTGCGACTAGTCG
CCGCACGACGTGAATCCTGATCCGTCATTCAGCAAGGCGTCGAAGTAAGG
GCTGTCCTTCCCCCGTCCTGCCCTTCGTCTAATAATCCTTCCTGCCCCTC
CCGGCCTCTCGACAGAAAACGCAAGGAGATTCAACTAAGATCAAGAAATA
TTGAACAAAACAACACAACTTAGAGAAATTGTCAACGATGAGGCTGCCCG
TAGACTACGGCTGCCCGTAAACTACAGAGGAAGATCCAAGAAGAACCCGA
GCCTCGCGCTCGTCGAAGGCGATGTAAGTTGGTCGCTTTGATGGTGTACA
GCGATTCGCTCATTTTTCGCAATTCTCCGAGTTTATCACATGTAAAATCA
TCCTTGAAAATATTTGCGTGACACACGAGTCAAAGAGGCCTCCGTTGCGT
TGCGAGGTGTAGGCAGATGATTAGTGCCCCCTGCATCCCGAGCCTGTGGC
CTGAACCTCACAGAAACAAGGGAACTGGACCCGGAGTTGTTGTTACTCTC
GTACGAAGCTGACCCCAAAACACACATGTAGCCGGTGGAGAAACAAGATT
TTACTAAAAGATAAATTGTGGTTAACCCCGTCTCGAATCCAGAGCCATGC
TGCGCTTGCTTGTGCTGCAACGTGGTTCCAGGCCTTTCGCGTCCACCCCC
AGCAAAGG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig121:47079..52536-

>mRNA_H-canaliculatus_F_contig121.1822.1 ID=mRNA_H-canaliculatus_F_contig121.1822.1|Name=mRNA_H-canaliculatus_F_contig121.1822.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2136bp|location=Sequence derived from alignment at H-canaliculatus_F_contig121:47079..52536- (Hapterophycus canaliculatus Oshoro5f female)
ATGGCTCCGTGCGCCAGGCTTTGCTTGCCTGTCTTGCTCTTTGCCGTATC
GTTTTCAGAAGGGTTTGTTCTTCCATTTTCAGCTCCCAGGAGCGGCGGTG
GAACTCGAAGTCGCGGCTGCGATGGCGTTCCAACGGCAGCAACACCTTCT
TTCCGGCGGCGGGTAGCTGCTTCCCATCATGTGCACCAACGACGTCGACC
AGACTCGAGCCTGAGCGTGCTTGGGCCAGATGGAAAAGAAATTGATATCA
TCAGGCATCGAGAGGCGTACTCTTATTCCGAATATTGGGACGATTTTTAT
GCTGGATGGCTCCGTGCGCCAGGCTTTGCTTGCCTGTCTTGCTCTTTGCC
GTATCGTTTTCAGAAGGGTTTGTTCTTCCATTTTCAGCTCCCAGGAGCGG
CGGTGGAACTCGAAGTCGCGGCTGCGATGGCGTTCCAACGGCAGCAACAC
CTTCTTTCCGGCGGCGGGTAGCTGCTTCCCATCATGTGCACCAACGACGT
CGACCAGACTCGAGCCTGAGCGTGCTTGGGCCAGATGGAAAAGAAATTGA
TATCATCAGGCATCGAGAGGCGTACTCTTATTCCGAATATTGGGACGATT
TTTATGCTGGGGGGGAGGCTGGCAGCCTCAAAGACGGGGAAGCGTACGAT
TGGTTCTTCGGATACGCGAGGCTGGCCGTGCACCTGAACCTTCACGTCGG
CGGGGCGAGGGCGGGGCGCGTGTTGGTGCTGGGTTGCGGCAACTCGGAAG
TGTCGCCCCTGATGTGGGAGAACGGATGGAAGGGGGAGGCTGGCAGCCTC
AAAGACGGGGAAGCGTACGATTGGTTCTTCGGATACGCGAGGCTGGCCGT
GCACCTGAACCTTCACGTCGGCGGGGCGAGGGCGGGGCGCGTGTTGGTGC
TGGGTTGCGGCAACTCGGAAGTGTCGCCCCTGATGTGGGAGAACGGATGG
AAGAACATTGTCAGCATCGACTTCTGCAGCCCTGTGATCGAGGCGATGCA
AAAGGTGCACAGCGACAAGGCCGGGATGGAGTGGAAGGAACATTGTCAGC
ATCGACTTCTGCAGCCCTGTGATCGAGGCGATGCAAAAGGTGCACAGCGA
CAAGGCCGGGATGGAGTGGAAGGTGATGGATGCCAGGGACATGTCGGCGT
TTGATACTGGCTCCTTCGACGCTGTGATCGACAAAGGGATGACTGACTCC
GTAATGTTCAACGACAATTTTGCGACGATGATGGCGAAGGTGATGGATGC
CAGGGACATGTCGGCGTTTGATACTGGCTCCTTCGACGCTGTGATCGACA
AAGGGATGACTGACTCCGTAATGTTCAACGACAATTTTGCGACGATGATG
GCGAAGGTTTCGTTCGAGGTGGCCCGCGTGCTGAAGCCGGGAGGAGTGTA
CCTGTTGACAGACTACAGAGATCCCGAACGGGTGCAGGAGCTGTTTGAGC
GCGATGAGTGGGAAAGCGGTTCACTGACGTTTCGTTCGAGGTGGCCCGCG
TGCTGAAGCCGGGAGGAGTGTACCTGTTGACAGACTACAGAGATCCCGAA
CGGGTGCAGGAGCTGTTTGAGCGCGATGAGTGGGAAAGCGGTTCACTGAC
GCACGAGGGGAAGATCACCCCGAAGGTGCACCTCTTTAAGGGGAAGCGAT
CTGAGACGATCGCTCAAGCTCCCGACTTCTTGGACGAGTTGATAGAGGAG
GTCGAGGGGGAAGCAGTCTCGGGAGAGGTGCTACAGGGGACGCCGGAAGA
CTCTCAGGAGTGGCTGACAGACGCGATTGCGCAGGGTGCCGTAAGCATAC
CGGACGAAGGTCCCGAGGACGAGGTGCCGCACAAGGACGTGGGCCAGGAC
AAGCCGTTCAAGTTTTGAGCACGAGGGGAAGATCACCCCGAAGGTGCACC
TCTTTAAGGGGAAGCGATCTGAGACGATCGCTCAAGCTCCCGACTTCTTG
GACGAGTTGATAGAGGAGGTCGAGGGGGAAGCAGTCTCGGGAGAGGTGCT
ACAGGGGACGCCGGAAGACTCTCAGGAGTGGCTGACAGACGCGATTGCGC
AGGGTGCCGTAAGCATACCGGACGAAGGTCCCGAGGACGAGGTGCCGCAC
AAGGACGTGGGCCAGGACAAGCCGTTCAAGTTTTGA
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