mRNA_H-canaliculatus_F_contig1207.1795.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1207.1795.1 vs. uniprot
Match: D8LB51_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB51_ECTSI) HSP 1 Score: 291 bits (745), Expect = 1.750e-80 Identity = 569/810 (70.25%), Postives = 600/810 (74.07%), Query Frame = 2
Query: 2 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 2431
VEKGK+LAA+IKEL ARDFEGMLEALEEGPKNAIVCT+AI+ LG+AGKW+EAV VLDGMGKGGDGSDRPDAFAYAA ALL EMPTRRV PDVVC+G+ I ALGEVAGTQNRSTWG K + D GG E +KP+A+A D PTRAHEKAL LI++MRREGPSPN QC+ASAITACARA DPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GME+AYGV XXXXXXXXXXX ALLNEM+E GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RGLPVTKRRVEYIQ KISG XXX NDRS + R A D A T +A GADFL ELR+RFAV+ EELA D DLDLLADD L A GA + SGE + AG A + V+ +G+ + G D R + GD I EQ EE T A + E FKAM V DLK ELKGRGLRVSG KAELLARLEE+LQQPAA
Sbjct: 186 VEKGKMLAARIKELAKARDFEGMLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGKGGDGSDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWGRKGA------DEGG----EGGDKPIASAVADPKPTRAHEKALELIQEMRREGPSPNSQCYASAITACARAHDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGMEKAYGVKXXXXXXXXXXXGLSRAGRAREAKALLNEMSERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLPVTKRRVEYIQAKISGGGGGRSXXXRK----NDRSRVQERTKAEDVVA----------------TTLRA-------------------------------GADFLEELRQRFAVETEELASDSDLDLLADDVLLA----GAIS-----SGEVKTNGEAGAATTSVDVTGA-----VGDSPVSGVDG--DDRTSEDGRSEADETVAEIADEAVRGD-ISEQGEEDTN--KAQLVLEGFKAMKVTDLKVELKGRGLRVSGNKAELLARLEEALQQPAA 915
BLAST of mRNA_H-canaliculatus_F_contig1207.1795.1 vs. uniprot
Match: A0A6H5KL58_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL58_9PHAE) HSP 1 Score: 256 bits (653), Expect = 6.310e-69 Identity = 563/810 (69.51%), Postives = 595/810 (73.46%), Query Frame = 2
Query: 17 ILAAKIKELGYARDFEGMLEALEEGPKNAIVCTMAISALGRAGKWKEAVGVLDGMGKGGDGSDRPDAFAYAAAXXXXXXXXXXXXXXALLAEMPTRRVTPDVVCYGATIAALGEVAGTQNRSTWGGKKSGGXXXXDVGGGDAWELEEKPVAAAAPDATPTRAHEKALSLIEQMRREGPSPNQQCFASAITACARAPDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMERAYGVXXXXXXXXXXXXXXXXXXXXXXXXALLNEMTEIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGLPVTKRRVEYIQEKISGXXXXXXXXXXXXXHDNDRSNAKRRGNARDTTASGGDVAQAPSPRKASSTVKKASRGAIHGGS-----VRGTAGAGGKRAEGGDGEEEEGGADFLAELRERFAVDAEELAGDDDLDLLADDALFAAGAAGAATAAPPRSGEEEKGRGAGTAIAAEAVSSTPSAPGMGEGATASSPGGPDFREXXXXXXXXXXXXXXXXXXXMTGDGIDEQEEEGTTGVAALSLPEDFKAMTVPDLKAELKGRGLRVSGKKAELLARLEESLQQPAA 2431
+LAA+IKEL ARDFEGMLEALEEGPKNAIVCT+AI+ LG+AGKW+EAV VLDGMGKGG SDRPDAFAYAA ALL EMPTRRV PDVVC+G+ I ALGEVAGTQNRSTWG K + + GG + P+AAA PTRAHEKAL LI+ MRREGPSPN QC+ASAITACARA DPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GME+AYGV XXXXXXXXX ALLNEM+E GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RGLPVTKRRVEYIQ KISG XXXXXXXX RS K R A D +G +G GG +A G EEE GADFL ELR+RFAV+ EELA D DLDLLADD L A GA + GE E AG + V+ +G+ + + G D R + D I Q E+ T A L L E FK M V DLK ELKGRGLRVSG KAELLARLE++LQQPAA
Sbjct: 1 MLAARIKELAKARDFEGMLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGKGG--SDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWGRKGA------NEGGXXXXXXXDMPMAAAVAGPKPTRAHEKALELIQDMRREGPSPNSQCYASAITACARAHDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGMEKAYGVKXXXXXXXXXISGLSRAGRAREAKALLNEMSERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLPVTKRRVEYIQAKISGGGGRXXXXXXXX-----RSRVKERTKAEDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQGKSGKGGSQAADG---EEEAGADFLEELRQRFAVETEELASDSDLDLLADDVLLA----GANSY-----GEVETNGEAGAVTTSVHVTGA-----VGDSPVSGADG--DDRMPEDGRSEADETVAEIADEAVRSD-ISGQGED--TNKAQLVL-EGFKTMKVTDLKVELKGRGLRVSGNKAELLARLEKALQQPAA 774 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1207.1795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1207.1795.1 >prot_H-canaliculatus_F_contig1207.1795.1 ID=prot_H-canaliculatus_F_contig1207.1795.1|Name=mRNA_H-canaliculatus_F_contig1207.1795.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=789bp MLEALEEGPKNAIVCTMAISALGRAGKWKEAVGVLDGMGKGGDGSDRPDAback to top mRNA from alignment at H-canaliculatus_F_contig1207:14361..28845- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1207.1795.1 ID=mRNA_H-canaliculatus_F_contig1207.1795.1|Name=mRNA_H-canaliculatus_F_contig1207.1795.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=14485bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1207:14361..28845- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1207:14361..28845- >mRNA_H-canaliculatus_F_contig1207.1795.1 ID=mRNA_H-canaliculatus_F_contig1207.1795.1|Name=mRNA_H-canaliculatus_F_contig1207.1795.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4734bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1207:14361..28845- (Hapterophycus canaliculatus Oshoro5f female)back to top |