mRNA_H-canaliculatus_F_contig12034.1779.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12034.1779.1
Unique NamemRNA_H-canaliculatus_F_contig12034.1779.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig12034.1779.1 vs. uniprot
Match: D8LNQ8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNQ8_ECTSI)

HSP 1 Score: 769 bits (1986), Expect = 5.700e-263
Identity = 413/605 (68.26%), Postives = 475/605 (78.51%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDADRADLLCLGCGDLRDLLYSILLHGRRGVGCGPVPRHLSFTLNDWEPAIHARNLMLLQMILDARDLVDVGGE-VDGITRRMDALKVSTASAPK---KESAESASKKKASPDSRDTTTDSSPHLA-PAFAQKVGAIFSAMFNMFVDGDTLEMIREVAARLAVSAASPEEWSSTELGQIVQFADDRSQNRVRQIFARYGDARLQEKGVFMKIRQQRSAFLATYIGKGPNSFLSRAMGLASLRQGDSIKANDKMRRQYLKEGILDPFPLLLSGQGVPAKPRGPFRKVNPLLLVTERKGEASSLHYGAFPLDAFHTDVSWWKLRPESLQDEYGKLAPRVTKH-DPTSADVSGGANLGVEALQNSWLGTALEELAQMCGAFLAATPAKPGNTAPRLTIIVHVGDSLNYCDALLTASSKSPGSTEDDRTANGNSTGIGVSPGATFAPVSFQQGSVHPLHLRDNIFSCPPEFDVISTNNLAEHLGIVNLLVASAPLLKTSPHAVLLTSLMSSLANLHNYKNLTEFQEKVLCMSSQAAGILIGVVPVSSLSSLVGHADTMTLIAGSMGTMFSRQKGSPISTPSQLRLVWKRPTTALPE 1797
            GNTPPTDLLQHVPHDA+RAD+L LGC DLRDLLYS+LLHGRRGV CGPVPR LSFTLNDWEPAIHARNLMLLQMILD+R L++   + VD + R MD + V   S  +   + + +S  KKK         T + P L+  AFAQ++G IFSAM+NMFVD DTL+M+ EVA RLA SAASP EWSSTELG+IV+FADDRSQ+RVR+I   Y D  LQE GVF +IR++R+AFL  Y+ K   + +SRAMGL+S  QG+SI+AN KMRRQYL+EGILDPFPLLL  +G PA  RGPFRKVNPLLLVTERKG ASSLHYGAFPLDAFHTDVSWWK+RPESLQDE+GKLA RVTKH D  S    GG  +     Q++W GTALEELAQMCGAFLAAT     + AP L II+ VGDSLN+CDALLTAS  S G+ ED  T+            A FAP+SFQQGSV PLHLR ++FSC PEFDVISTNNL EHLG+VN+LVASAPLLK  PHAVLLTSLM++L NLH YK+L +FQ K+LCMSSQAAGIL+GVVPVSSLSS+VGHADTMTL+AGS+GTMFSRQKG+  S PSQ RLVWKRP+ AL E
Sbjct:   30 GNTPPTDLLQHVPHDAERADILSLGCSDLRDLLYSVLLHGRRGVSCGPVPRQLSFTLNDWEPAIHARNLMLLQMILDSRGLLNAEADGVDAVVRGMDTVAVDAGSGDRSIPEAAGKSVCKKKTGKKKTSDKTATKPSLSGAAFAQRIGVIFSAMYNMFVDADTLKMVHEVAGRLASSAASPAEWSSTELGRIVRFADDRSQDRVREILTNYTDHGLQEPGVFTRIRRERTAFLTKYMPKSMGNIISRAMGLSSFCQGESIEANAKMRRQYLREGILDPFPLLLE-EGAPAVRRGPFRKVNPLLLVTERKGAASSLHYGAFPLDAFHTDVSWWKVRPESLQDEFGKLARRVTKHRDAGSHSGLGGPKVANGVRQDAWFGTALEELAQMCGAFLAATSTSVSSAAPALGIILQVGDSLNFCDALLTAS-PSRGAVEDCTTS------------AEFAPISFQQGSVQPLHLRADVFSCQPEFDVISTNNLVEHLGMVNVLVASAPLLKALPHAVLLTSLMATLVNLHQYKDLADFQAKLLCMSSQAAGILLGVVPVSSLSSVVGHADTMTLVAGSLGTMFSRQKGASESAPSQFRLVWKRPSAALGE 620          
BLAST of mRNA_H-canaliculatus_F_contig12034.1779.1 vs. uniprot
Match: D7FXN8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXN8_ECTSI)

HSP 1 Score: 525 bits (1353), Expect = 1.090e-168
Identity = 314/611 (51.39%), Postives = 385/611 (63.01%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDADRADLLCLGCGDLRDLLYSILLHGRRGVGCGPVPRHLSFTLNDWEPAIHARNLMLLQMILDARDLVDVGGEVDGITRRMDALKVSTASAPKKESAESASKKKASPDSRDTTTDSSPHLAPAFAQKVGAIFSAMFNMFVDGDTLEMIREVAARLAVSAASPEEWSSTELGQIVQFADDRSQNRVRQIFARYGDARLQEKGVFMKIRQQRSAFLATYIGKGPN-SFLSRAMGLASLRQGDSIKANDKMRRQYLKEGILDPFPLLLSGQGVPAKPRGPFRKVNPLLLVTERKGEASSLHYGAFPLDAFHTDVSWWKLRPESLQDEYGKLAPRVTKHDPTSADVSG-GANLGVEAL----------QNSWLGTALEELAQMCGAFLAATPAKPGNTAPRLTIIVHVGDSLNYCDALLTASSKSPGSTEDDRTANGNSTGIGVSPGATFAPVSFQQGSVHPLHLRDNIFSCPP---EFDVISTNNLAEHLGIVNLLVASAPLLKTSPHAVLLTSLMSSLANLHNYKNLTEFQEKVLCMSSQAAGILIGVVPVSSLSSLVGHADTMTLIAGSMGTMFSRQKGSPISTPSQLRLVWKRPTTA 1788
            GNTPPTDLLQH+PHDA  A++L LGCGDLRD LYS+LLHGRRGV CG VPR  SF +NDWEPAIHARNLMLLQM LDARD+++  G                 SA KK+S       +   +SR   +      A AFAQ++G I+S+M+N FVD + LEMI  VA RLA +A SP  W+S ELG++V+FADD SQ RVR+I A Y D  LQ +G   +++++R+A + TY     + S  SRAMGLAS RQGD +    +MRR++LK+G+LDPFPLLL       K RG F  VNPLLLVTE KG A SLHY AFPLDAFHTDV WWKLRPE+LQ E+GK+AP+VTK  P   +++G GA  G  +           QN W  TALEELAQMCGAF+ AT         +L+I +HVGD+LN CDALL AS+  P  +   R  NG       +P   F PV  QQG++ P+ LR +    P    EFDVI+T+NL+EHLG+VNLLVA+APLLKT+ HAVLLTS M++L NL  YKN +EF EK LCM SQA+ +L           LVG                      P   PS LRL W+RP  A
Sbjct:   54 GNTPPTDLLQHIPHDAQHAEILSLGCGDLRDFLYSVLLHGRRGVSCGHVPRRFSFMMNDWEPAIHARNLMLLQMFLDARDILESSG-----------------SATKKKSGTKKXXXRGG-NSRGHGSGRGSSAA-AFAQRIGVIYSSMYNSFVDAEVLEMIESVAGRLAAAAESPSTWASAELGRLVRFADDCSQQRVRKILAAYADGSLQREGAAARVKRERAAVIGTYCPPRDDLSIHSRAMGLASFRQGDCMNPYAEMRREFLKKGVLDPFPLLLEDGAESGKRRGSFDLVNPLLLVTETKGMAYSLHYAAFPLDAFHTDVCWWKLRPENLQGEFGKVAPKVTK--PQGFNLAGSGATQGPFSFKPTAKTQRDTQNVWFVTALEELAQMCGAFVRATA--------KLSITIHVGDALNCCDALLAASAALP--SVRSREENGV-----TAPKDVFPPVFCQQGTLQPVQLRADALMTPSGFFEFDVINTSNLSEHLGVVNLLVAAAPLLKTTAHAVLLTSFMAALQNLSLYKNTSEFYEKYLCMGSQASSLL-----------LVG----------------------PGGAPSLLRLAWRRPAQA 595          
BLAST of mRNA_H-canaliculatus_F_contig12034.1779.1 vs. uniprot
Match: D8LNQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ6_ECTSI)

HSP 1 Score: 447 bits (1150), Expect = 2.000e-145
Identity = 277/538 (51.49%), Postives = 338/538 (62.83%), Query Frame = 1
Query:  208 MLLQMILDARDLVDVGGE-VDGITRRMDALKVSTASAPK---KESAESASKKKASPDSRDTTTDSSPHL-APAFAQKVGAIFSAMFNMFVDGDTLEMIREVAARLAVSAASPEEWSSTELGQIVQFADDRSQNRVRQIFARYGDARLQEKGVFMKIRQQRSAFLATYIGKGPNSFL-SRAMGLASLRQGDSIKANDKMRRQYLKEGILDPFPLLLSGQGVPAKPRGPFRKVNPLLLVTERKGEASSLHYGAFPLDAFHTDVSWWKLRPESLQDEYGKLAPRVTKHDPTSADVSGGANLGVEAL-QNSWLGTALEELAQMCGAFLAATPAKPGNTAPRLTIIVHVGDSLNYCDALLTASSKSPGSTEDDRTANGNSTGIGVSPGATFAPVSFQQGSVHPLHLRDNIFSCPPEFDVISTNNLAEHLGIVNLLVASAPLLKTSPHAVLLTSLMSSLANLHNYKNLTEFQEKVLCMSSQAAGILIGVVPVSSLSSLVGHADTMTLIAGSMGTMFSRQKGSPISTPSQLRLVWKRPTTALPEP 1800
            MLLQMILD+R L++   + VD + R +D + V   S  +   + + +S  KKKA+       T   P L   AFAQ++G IFSAM+NMFVD DTL+M+ EVA  LA SAASP EW+STELGQIV+FADDRSQ+RVR+I   Y D  LQE  VF +IRQ+R+AFL T++GK     + SRAMGLAS  QG+ I+AN KMRR                                                            +SWWKLRPE LQ ++GKL+PRVTKH    A    G      AL QN+W GTALEELAQMCGAFLAAT        P L I + VGD+LN+CDALLTAS  S G+ ED  T+            A FAP+SFQQGSV PLHLR  IFS PP+FDVI+T+NLAEHLG VN+LVAS+PLLKT PHAVLLTSL++S A LH Y  L +FQ K+LCMSS  AGIL+GVVPVSSLSS+VGHADTM  ++G++ T   +Q GS  S+ +QLRL+WKRP++ L  P
Sbjct:    1 MLLQMILDSRGLLNAEADGVDDVIRGVDTVAVDAGSGDRSIPEAAGKSVGKKKAAKTKTSGKTADKPSLHGAAFAQRIGVIFSAMYNMFVDADTLKMVHEVAGTLAGSAASPAEWASTELGQIVRFADDRSQDRVREILTNYTDDGLQEPRVFTRIRQERTAFLYTHMGKDTKPEIWSRAMGLASFCQGEGIEANAKMRRH-----------------------------------------------------------LSWWKLRPERLQGDFGKLSPRVTKHLEAGAHSGPGEPKVANALRQNAWFGTALEELAQMCGAFLAATSTSVPKATPHLDITMQVGDALNFCDALLTAS-PSMGTAEDCATS------------AVFAPISFQQGSVQPLHLRAGIFSYPPQFDVINTSNLAEHLGTVNVLVASSPLLKTLPHAVLLTSLLASTATLHLYDGLADFQAKLLCMSSHTAGILLGVVPVSSLSSVVGHADTMAFLSGTLPT---QQDGSSGSSSTQLRLMWKRPSSDLTSP 463          
BLAST of mRNA_H-canaliculatus_F_contig12034.1779.1 vs. uniprot
Match: D8LCP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP5_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 1.730e-100
Identity = 211/481 (43.87%), Postives = 276/481 (57.38%), Query Frame = 1
Query:  208 MLLQMILDARDLVDVGGEVDGITRRMDALK-VSTASAPKKESAESASKKKASPDSRDTTTDSSPHLAPAFAQKVGAIFSAMFNMFVDGDTLEMIREVAARLAVSAASPEEWSSTELGQIVQFADDRSQNRVRQIFARYGDARLQEKGVFMKIRQQRSAFLATYIGKGPNSFLSRAMGLASLRQGDSIKANDKMRRQYLKEGILDPFPLLLSGQGVPAKPRGPFRKVNPLLLVTERKGEASSLHYGAFPLDAFHTDVSWWKLRPESLQDEYGKLAPRVTKHDPTSADVSGGAN----LGVEALQNSWLGTALEELAQMCGAFLAATPAK--PGNTAPRLTIIVHVGDSLNYCDALLTASSKSPGSTEDDRTANGNSTGIGVSPGATFAPVSFQQGSVHPLHLRDNIFSCPPEFDVISTNNLAEHLGIVNLLVASAPLLKTSPHAVLLTSLMSSLANLHNYKNLTEFQEKVLCMSSQAAGILI 1629
            MLLQMILD+RDL+D     D IT RM +L  +   S   + +  +A K     D+ +            FAQ++G IF A+FNMFVD + L  I +VA RLA SAASP EW+STELG  V F+DDRS++RV                                                                 +L+EGILDPFPLL   +  PAK RGP + VNPLLLVTERKG ASSLHYGAFPLDAF+T  S WKLRP+S QDEYG+ AP VTK    ++ + GG +    +     Q +WL  ALEELAQMCGA L AT       +T  RL+I VHVGD+LN+CDALL  +  + GS + D    G++  +  + G+   PV+FQQ ++ PLHL     +   EFDVIS++NLA++LGI+N++VASAPLLK   HAVLLTS +S+L + + ++   EF EK+LCM++  A +L+
Sbjct:    1 MLLQMILDSRDLMD---SPDSITHRMGSLGGLGDPSRSTEPATSAAGKAGGGMDAEEC--------GAVFAQRIGVIFCALFNMFVDAEVLATILDVAGRLAASAASPAEWASTELGGFVHFSDDRSRDRV-----------------------------------------------------------------HLREGILDPFPLLC--EDTPAKRRGPCKLVNPLLLVTERKGAASSLHYGAFPLDAFNT-ASLWKLRPQSFQDEYGQQAPTVTKPREMNSQIGGGGSRVTSIPTSVAQQAWLSAALEELAQMCGALLRATATSNADSSTGSRLSINVHVGDALNFCDALLACAPPTRGSADAD----GDAPKVSATRGS---PVAFQQDTLQPLHLWAGAVT---EFDVISSSNLADYLGIINVVVASAPLLKAHHHAVLLTSFISTLKSSNLFQGTQEFYEKLLCMNAHTAAVLL 392          
BLAST of mRNA_H-canaliculatus_F_contig12034.1779.1 vs. uniprot
Match: A0A6H5JFV6_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV6_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 1.600e-96
Identity = 225/479 (46.97%), Postives = 279/479 (58.25%), Query Frame = 1
Query:  208 MLLQMILDARDLVDVGGEVDGITRRMDALK-VSTASAPKKESAESASKKKASPDSRDTTTDSSPHLAPAFAQKVGAIFSAMFNMFVDGDTLEMIREVAARLAVSAASPEEWSSTELGQIVQFADDRSQNRVRQIFARYGDARLQEKGVFMKIRQQRSAFLATYIGKGPN-SFLSRAMGLASLRQGDSIKANDKMRRQYLKEGILDPFPLLLSGQGVPAKPRGPFRKVNPLLLVTERKGEASSLHYGAFPLDAFHTDVSWWKLRPESLQDEYGKLAPRVTKHDPTSADVSGGANLGVEALQNSWLGTALEELAQMCGAFL--AATPAKPGNTAPRLTIIVHVGDSLNYCDALLTASSKSPGSTEDDRTANGNSTGIGVSPGATFAPVSFQQGSVHPLHLRDNIFSCPPEFDVISTNNLAEHLGIVNLLVASAPLLKTSPHAVLLTSLMSSLANLHNYKNLTEFQEKVLCMSSQAAGILIG 1632
            MLLQMILD+R L+DV    DGIT RM +L+ +   S     +  +A K+    D+ D            FAQ++G IF A+FNMFVD + L  IR+VA RLA SAASP EW+STELG  V F+DDRSQ+RVR+I+  Y D  LQ+ GVFMKIRQ+RSAFLA Y+ KG   +F+SRAMGLAS R  ++++A+ KMRRQYL+EGILDPFPLL   +  PAK RGP + VNPLLLVTERKG ASSLHYGAFPLDAF+T                G    RVT   PTS              Q +WL TALEELAQMCGA L   AT     +   RL+I VHVGD+LN+CD LL  +S + GS + D  A                                     P E         +   GI+N++VASAPLLK   +AVLLTS +S+      ++   EF EK+LCM+S  A +L+G
Sbjct:    1 MLLQMILDSRGLMDVP---DGITHRMGSLRGLGDPSRSTGPATSAAGKEGGGMDAEDC--------GAVFAQRIGVIFCALFNMFVDAEVLATIRDVAGRLAASAASPAEWASTELGSFVHFSDDRSQDRVRKIWFSYIDGSLQDNGVFMKIRQERSAFLAKYMPKGKKLNFVSRAMGLASCRLPETMEASSKMRRQYLREGILDPFPLLR--EDTPAKRRGPCKLVNPLLLVTERKGAASSLHYGAFPLDAFNTG---------------GGEGSRVTSI-PTSI------------AQEAWLSTALEELAQMCGALLRVTATSNADSSAGSRLSINVHVGDALNFCDTLLACASPAWGSADADGDA-------------------------------------PKE---------SATRGIINVVVASAPLLKAHRYAVLLTSFISTSHVSSLFQGTQEFYEKLLCMNSHTAAVLLG 392          
BLAST of mRNA_H-canaliculatus_F_contig12034.1779.1 vs. uniprot
Match: A0A6H5K075_9PHAE (DUF4470 domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K075_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 2.940e-25
Identity = 177/733 (24.15%), Postives = 277/733 (37.79%), Query Frame = 1
Query:   43 DADRADLLCLGCGDLRDLLYSILLHG-----RRGVGCGPVP--------------RHLSFTLNDWEPAIHARNLMLLQMILDARD-LVDVGGEVDGITRRMDALKVSTASAPKKESAESASKKKASPDSRDTTTDSSPHLAPAFAQKVGAIFSAMFNMFVDGDTLEMIREVAARLAVSAASPEEWSSTELGQIVQFADDRSQN---------------------------------------------RVRQIFARYGDARLQEKGVFMKIRQQRSAFLATYI------------GKGPNSFLSRAMGLASLRQGDSIKANDKMRRQYLKEGILDPFPLLLSGQGVPAKPRGPFRKVNPLLLVTERKGEASSLHYGAFPLDAFHTDVSWWKLRPESLQDEY--GKL--------------APRVTKHDPTSAD----VSGGANLGVEALQNSWLGTALEELAQMCGAF----------LAATPAKPGNTAPRLTIIVH--VGDSLNYCDALLTASSKSPGSTEDDRTANGNSTGIGVSPGATFAPVSFQQGSVHPLHLRDNIFSCPPEFDVISTNNLAEHLGIVNLLVASAPLLKTSPHAVLLTSLMSSLANLHNYKNLTEFQEKVLCMSSQA---------------------------------------------AGILIGVVPVSSLSSLVGHADTMTLIAGSMGTMFSRQKGSPISTPSQ-LRLVWKR 1776
            DA RAD+L LGC D R  L+++  +G      RG   G                 R L FT+ND EPA  AR L+LLQ+  ++ D LV   G    +      L                         R  + ++SP    A++ K+   F+A +N++VD  TL+  +  A +L  ++ASP  WS + +G I   A   + N                                             R+R ++  Y D  + +     ++ ++R  +    +            G+GP     +AM   +   G        + RQY   G LDPFP+L          RG  R+                +H+   PL AFH D  W   +P   +  +  G+                PRVT  D T  +             + + +  + T+LE+L++MC A            +A  AK G   P + + ++  +GD+++ CDA+   SS+  G     +  +G+  G   S    F P      S+ P  L       P  FD+I ++ LA +LGI+N+++A++PLLK SPHAV+ T L  S       K LT  ++    +++QA                                               +L+GVVPVS ++  VGH  TM   A +  T    +K + I    Q LRL WK+
Sbjct:    2 DARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQDPDGLRTLRFTMNDREPACLARVLLLLQLFCNSHDDLVRGWGSERAVMVGRGGL-------------------------RACSPNASPEQLHAYSAKIALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWSMSPVGSIAHIAGRSTLNDSVWSMRAALVSGPSDVGPRTRSHPPYALIAVLRLPPTLWLRPCSRLRCMWYVYADTSIVQIKPKKQLDKERKTYHDRTVFPSKNASPILLTGEGPGIAAPKAMEWGTEMTG--------IHRQYQSWGYLDPFPVL----------RGGARRYE------------GGVHHKCNPLSAFHHDDVWLPFKPREHESTHDGGRFNMTGSSGCMPLYAGPPRVTGVDLTVTESPLEFEDEPEEAKQHIMSKLVATSLEQLSRMCWAVNWARLEKEQSSSAALAKQGRPRPPVDVRMNFVLGDAVDTCDAMCLLSSE--GLAAWGKARDGHEPGRVCS----FMP----NMSLSPCQLELADLDGPARFDLIDSSYLANNLGILNVVMATSPLLKPSPHAVVRTDLRRSGPA---RKRLTRAKDVEAAIAAQAEAEKSVEGLDAKGKKXXXXXXXXXXAAAAYAALTDEDWCTTKVQECALLLGVVPVSGVAPAVGHFHTMLEAARAAKT---NKKNADIGDLGQRLRLAWKQ 663          
BLAST of mRNA_H-canaliculatus_F_contig12034.1779.1 vs. uniprot
Match: UPI002008568D (uncharacterized protein n=2 Tax=Purpureocillium takamizusanense TaxID=2060973 RepID=UPI002008568D)

HSP 1 Score: 106 bits (264), Expect = 4.450e-20
Identity = 144/602 (23.92%), Postives = 229/602 (38.04%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDADRADLLCLGCGDLRDLLYSILLHGRRGVGCGPVPRHLSFTLNDWEPAIHARNLMLLQMILDARDLVDVGGEVDGITRRMDALKVSTASAPKKESAESASKKKASPDSRDTTTDSSPHLAPAFAQKVGAIFSAMFNMFVDGDTLEMIREVAARLAVSAASPEEWSSTELGQIVQFADDRSQNRVRQIFARYGDARLQEKGV-----FMKIRQQRSAFLATYIGKGPNSFLS-RAMGLASLRQGDSIKANDKMRRQYLKEGILDPFPLLLSGQGVPAKPRGPFRKVNPLLLVTERKGEASSLHYGAFPLDAFHTDVSWWKLRPESLQDEYGKLAPRVTKHDPTSADVSGGANLGVEALQNSWLGTALEELAQMCGAFLAATPAKPGNTAPRLTIIVHVGDSLNYCDALLTASSKSPGSTEDDRTANGNSTGIGVSPGATFAPVSFQQGSVHPLHLRDNIFSC----PPEFDVISTNNLAEHLGIVNLLVASAPLLKTSPHAVLLTSLMSSLANLHNYKNLTEFQEKVLCMSSQAAGILIGVVPVSSLSSLVGHADTMTLIAGSMGTMFSRQKGSPISTPSQLRLVWKR 1776
            GNTP T+L + +PH  D AD+L LGCGDLR++LY+  +        G  PR L FT  D++  +  RN++ L  ++D  +                                     KA+ DS                     ++   +++F+D  T E++ +   +L     S + W      +I++F D  + + VR++  R   A     GV     F+K  Q         +G G +S    R+    SL+  DSI    +   QY ++G + P      G  +P          NP+        +   LHYG  P   +H   ++  L   S       L P  T    T+   +  A    +A    WL +AL  + +    F                    V +   +C  L   ++                       G   A    +Q  +  L L D+++      P  FDVI T+NL++H+G +NLLV++APLLK +P A L T LM S      +K+L E    +L   +    +L+G+ PV   ++    +    +  G M     R +G    T    RL WKR
Sbjct:   17 GNTPATNLARSIPHGED-ADILTLGCGDLRNILYTAYVEK------GLAPRKLDFTCCDFDEKVIGRNIIFLTFVVDRNE-------------------------------------KATDDS---------------------LWDIYYHLFLDDATSELVLQQTQKLTPLLESLDTWKKGPYHRILRFCDKDTLDDVRRVCHRVLAASEARHGVAHRKAFVKCLQATKGIRDQVVGAGGHSITGLRSAAPLSLKAVDSIS---RASMQYARDGTVTPRS---DGVDIP----------NPMF--AGLLSDTEILHYGTDPALGYHLATAYAPLAAGS------PLRPEATY---TAFKAAAAA----KAQFREWL-SALRLMVEHGVVFRFV-----------------VAEVYAFCHTLQNVAAS----------------------GQPLANWYRRQWDLKRLRLDDSVYGATGDGPTIFDVIDTSNLSDHVGPLNLLVSTAPLLKATPWATLNTELMLS-----KHKSLKEALTGILGGHAPTMSLLLGISPVQYWTNAKCESHVDEVFLGLMTEPSQRDRGE---TQLHSRLSWKR 474          
BLAST of mRNA_H-canaliculatus_F_contig12034.1779.1 vs. uniprot
Match: UPI001D05560F (MYND finger domain-containing protein n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D05560F)

HSP 1 Score: 104 bits (260), Expect = 1.360e-19
Identity = 143/610 (23.44%), Postives = 237/610 (38.85%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDADRADLLCLGCGDLRDLLYSILLHGRRGVGCGPVPRHLSFTLNDWEPAIHARNLMLLQMILDARDLVDVGGEVDGITRRMDALKVSTASAPKKESAESASKKKASPDSRDTTTDSSPHLAPAFAQKVGAIFSAMFNMFVDGDTLEMIREVAARLAVSAASPEEWSSTELGQIVQFADDRSQNRVRQIFARYGDARLQEKG------VFMKIRQQRSAFLATYIGKGPNSFLSRAMGLASLRQGDSIKANDKMRRQYLKEG------ILDPFPLLLSGQGVPAKPRGPFRKVNPLL--LVTERKGEASSLHYGAFPLDAFHTDVSWWKLRPESLQDEYGKLAPRVTKHDPTSADVSGGANLGVEALQNSWLGTALEELAQMCGAFLAATPAKPGNTAPRLTIIVHVGDSLNYCDALLTASSKSPGSTEDDRTANGNSTGIGVSPGATFAPVSFQQGSVHPLHLRDNIFSC----PPEFDVISTNNLAEHLGIVNLLVASAPLLKTSPHAVLLTSLMSSLANLHNYKNLTEFQEKVLCMSSQAAGILIGVVPVSSLSSLVGHADTMTLIAGSMGTMFSRQKGSPISTPSQLRLVWKR 1776
            GNTP T L + +PH  D AD+L LGCGDLR++L++  +   RG+    VPR L  T  D++  I  RN++LL +ILD                  D  KV+                                         G+++   +++++D  T ++I +   ++     S E W     G+ ++F D  + + VR+I  R      Q +G       F++  +  +   A  +G G N    R+    S+   D +    +   QY  EG      I DP P                   NP+   LV+E       LHYG  P+  +H   ++  L P S         P   K DP  A  +G A              A+ +  +   AF  A   K G     + +   V ++L  C  L   S+                       G++ A    +Q  +  L L +  +      P  FD++ T+NL++HLG +N+++A+APL+K  P A + T LM     +  + +     + +LC  +    +L+GV PV   ++    +  + +  G M    +++  +   T    RL WKR
Sbjct:   17 GNTPATSLTRSIPHGQD-ADILTLGCGDLRNVLFTAYVE--RGL----VPRKLDITCCDYDERIIGRNIILLTLILD------------------DDAKVTE----------------------------------------GSLWDIYYHLYLDDSTAQLILQQTEKILPLLKSVEAWRDGPYGRTLKFCDRDTLDDVRRI-CRLVMRGSQNRGNKAFKDAFIRHSKASTDSRARQLGNGSNLAAMRSAAPLSMSAVDELV---RAGNQYWNEGTVTARKIADPVP-------------------NPMFAALVSEH----GILHYGTDPILGYHLATAFAPLSPHS---------PLELK-DPVPAFRAGAA--------------AMAQFREWIAAFRLAV--KRG-----IVLRFAVAEALALCHTLQHVSAS----------------------GSSSANWYRRQFELKLLALDETAYGSGREGPAAFDMVDTSNLSDHLGTLNVVIATAPLMKQKPWATVYTELM-----IKRHDSQQRAFDSLLCGHAPTVSLLLGVSPVQYWTNAKCESHVVEVFLGLM----TKESSTGKETQLHSRLAWKR 472          
BLAST of mRNA_H-canaliculatus_F_contig12034.1779.1 vs. uniprot
Match: A0A0C2XDS3_HEBCY (MYND-type domain-containing protein n=1 Tax=Hebeloma cylindrosporum h7 TaxID=686832 RepID=A0A0C2XDS3_HEBCY)

HSP 1 Score: 104 bits (260), Expect = 1.380e-19
Identity = 151/612 (24.67%), Postives = 234/612 (38.24%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDADRADLLCLGCGDLRDLLYSILLHGRRGVGCGPVPRHLSFTLNDWEPAIHARNLMLLQMILDARDLVDVGGEVDGITRRMDALKVSTASAPKKESAESASKKKASPDSRDTTTDSSPHLAPAFAQKVGAIFSAMFNMFVDGDTLEMIREVAARLAVSAASPEEWSSTELGQIVQFADDRSQNRVRQIFARY---GDARLQEKGVFMKIRQQRSAFLATYIGKGPNSFLSRAMGLAS-LRQGDSIKA------NDKMRRQYLKEGILDPFPLLLSGQGVPAKPRGPFRKVNPLLLVTERKGEASSLHYGAFPLDAFHTDVSWWKLRPESLQDEYGKLAPRVTKHDPTSADVSGGANLGVEALQNSWLGTALEELAQMCGAFLAATPAKPGNTAPRLTIIVHVGDSLNYCDALLTASSKSPGSTEDDRTANGNSTGIGVSPGATFAPVSFQQGSVHPLHLRDNIFSCPPEFDVISTNNLAEHLGIVNLLVASAPLLKTSPHAVLLTS--LMSSLANLHNYKNLTEFQEKVLCMSSQAAGILIGVVPVSSLSSLVGHADTMTLIAGSMGTMFSRQKG-SPISTPSQLRLVWKRPTTALPE 1797
            GNTPP    Q +  + + A++L L CGD R +LY++           P  R+L  T  DWEPAI ARN++LL MI D    VD                                                    P F           ++ F+D ++  ++      L  SA+    W S++ G   +F  D S   +R+ +  Y   GD   +++ V  +               G  S L R++ + S LR    +          K  R +   G+        +     +K   PF  VNP   V    G+  ++HYG  P+ AFH                   LAP +        D+  GA        N  + +++++    C +F     +  G+ A  + I   VG++L +C AL              +     +TG+ VS      P S  Q S  P        + P  F VI T+NL +H G++N+L+A+ PLL+  P AVL T+  ++++  N      LT   EK  C       IL+GV P  +L     H++   +IA S+    S Q G S I  P    L W+ P + +P+
Sbjct:   17 GNTPPVCFTQDLAPE-ENAEILLLACGDPRSILYTV------HADLAPDFRNLDITCCDWEPAILARNILLLTMITDDVSPVDAW--------------------------------------------------PIF-----------YHFFLDRNSYNILLAQCRTLVQSASDMRTWKSSKYGAHFRFCTDHSLAEIRRHWVLYLESGDLSDKDQKVLKRT-----------FNSGMKSVLDRSVNVISALRSAGPVGVFSIHDLGPKSFRTFWTTGV--------TSATSASKTSPPF--VNPTF-VHSLSGKHFNVHYGTDPILAFH-------------------LAPVM-------GDIK-GAQSSPTLSPNDLVASSMDQFRSWCSSFKRRLAS--GSKA-NIIIRFFVGETLAFCRALAIC-----------KELQVTNTGVYVS------PWSGMQISFDPEEYGGPSTTAPLAFSVIDTSNLTDHAGLLNILIATVPLLQRRPWAVLYTNTLVVNTFDNGAPTSGLTVMTEKA-CGDIPTLSILLGVAPSPNLFHFTTHSNKHEVIASSIT---SSQSGLSQIHEP----LAWRFPASVIPK 483          
BLAST of mRNA_H-canaliculatus_F_contig12034.1779.1 vs. uniprot
Match: A0A0F8A266_9HYPO (MYND-type zinc finger protein samB n=1 Tax=Hirsutella minnesotensis 3608 TaxID=1043627 RepID=A0A0F8A266_9HYPO)

HSP 1 Score: 103 bits (258), Expect = 2.400e-19
Identity = 140/602 (23.26%), Postives = 231/602 (38.37%), Query Frame = 1
Query:    1 GNTPPTDLLQHVPHDADRADLLCLGCGDLRDLLYSILLHGRRGVGCGPVPRHLSFTLNDWEPAIHARNLMLLQMILDARDLVDVGGEVDGITRRMDALKVSTASAPKKESAESASKKKASPDSRDTTTDSSPHLAPAFAQKVGAIFSAMFNMFVDGDTLEMIREVAARLAVSAASPEEWSSTELGQIVQFADDRSQNRVRQIFARYGD-ARLQEKGVFMKIRQQR----SAFLATYIGKGPNSFLSRAMGLASLRQGDSIKANDKMRRQYLKEGILDPFPLLLSGQGVPAKPRGPFRKVNPLLLVTERKGEASSLHYGAFPLDAFHTDVSWWKLRPESLQDEYGKLAPRVTKHDPTSADVSGGANLGVEALQNSWLGTALEELAQMCGAFLAATPAKPGNTAPRLTIIVHVGDSLNYCDALLTASSKSPGSTEDDRTANGNSTGIGVSPGATFAPVSFQQGSVHPLHLRDNIFSC----PPEFDVISTNNLAEHLGIVNLLVASAPLLKTSPHAVLLTSLMSSLANLHNYKNLTEFQEKVLCMSSQAAGILIGVVPVSSLSSLVGHADTMTLIAGSMGTMFS-RQKGSPISTPSQLRLVWKR 1776
            GNTP T+L + +PH  D A++L LGCGDLR++L++        V  G   R L FT  D++  +  RNL+LL +I+D ++           T   D L                                               ++  +++++D     ++ +   R+     S E WS    G  ++F D  +    R+I  R  D A+   K  F K  +QR    + F    +GKG  +F    M  A+     S+    K    Y  +G + P       + +P          NP+        E  +LHYG  P+  FH   ++  L P+S       + PR    DP       G N    A+          +  +   AF      K G     L +   V ++L +C  L  A++    S    R                      +   + PL+L D ++      P  FD+I T+NL++H+G +N+++A+ PLLK  P + L T L+     +   ++     + +LC  +    +L+G+ PV   ++    +    L  G M    S R K + + +    RL WKR
Sbjct:   17 GNTPATNLARSIPHGQD-AEILALGCGDLRNILFTAY------VDTGLASRKLDFTCCDYDERVIGRNLILLTLIIDGQE-----------TASEDCL-----------------------------------------------WTIYYHLYIDEKAASIVLDQTNRILPLLESIETWSKGSYGAALKFCDGDTLRDARRICRRILDGAKDCRKPDFRKTFEQRRKSAAEFRVLQLGKGGQNF--SGMRSAAPLSLQSVNEIPKANEHYWSQGTVTPRK---ETESLP----------NPMF--ASLVSEDGNLHYGTDPVLGFHLAAAFAPLSPKS------PMKPR----DPVP-----GFNTAAAAMT---------QFREWVAAFRLVV--KRG-----LVVRFVVAEALAFCHTLQHAAASGDNSANWYR----------------------RLWEMKPLNLDDGVYGRGRHGPVAFDMIDTSNLSDHMGALNVIIATGPLLKQKPWSTLYTELL-----IKRGESQQRVFDTLLCGHAPTLSLLLGISPVHYWTNAKSESHVDELFLGYMSKSDSLRGKETQLHS----RLAWKR 474          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12034.1779.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNQ8_ECTSI5.700e-26368.26MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D7FXN8_ECTSI1.090e-16851.39MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D8LNQ6_ECTSI2.000e-14551.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCP5_ECTSI1.730e-10043.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFV6_9PHAE1.600e-9646.97MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K075_9PHAE2.940e-2524.15DUF4470 domain-containing protein (Fragment) n=2 T... [more]
UPI002008568D4.450e-2023.92uncharacterized protein n=2 Tax=Purpureocillium ta... [more]
UPI001D05560F1.360e-1923.44MYND finger domain-containing protein n=1 Tax=Hirs... [more]
A0A0C2XDS3_HEBCY1.380e-1924.67MYND-type domain-containing protein n=1 Tax=Hebelo... [more]
A0A0F8A266_9HYPO2.400e-1923.26MYND-type zinc finger protein samB n=1 Tax=Hirsute... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12034contigH-canaliculatus_F_contig12034:144..3749 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score118.6
Seed ortholog evalue9.8e-24
Seed eggNOG ortholog101028.EKJ78693
EggNOG free text desc.Domain of unknown function (DUF4470)
EggNOG OGs1FRQ4@110618,2115D@147550,2BWBX@1,2SE9H@2759,39W4I@33154,3P092@4751,3QK9K@4890,3TGXU@5125
Ec32 ortholog descriptionZinc finger, MYND-type
Ec32 orthologEc-08_006200.1
COG Functional cat.S
Best tax levelNectriaceae
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size1800
Cds size1800
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928914.8231337-CDS-H-canaliculatus_F_contig12034:143..3131622928914.8231337-CDS-H-canaliculatus_F_contig12034:143..313Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 144..313 -
1696845611.166728-CDS-H-canaliculatus_F_contig12034:143..3131696845611.166728-CDS-H-canaliculatus_F_contig12034:143..313Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 144..313 -
1622928914.8419704-CDS-H-canaliculatus_F_contig12034:882..10531622928914.8419704-CDS-H-canaliculatus_F_contig12034:882..1053Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 883..1053 -
1696845611.1794305-CDS-H-canaliculatus_F_contig12034:882..10531696845611.1794305-CDS-H-canaliculatus_F_contig12034:882..1053Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 883..1053 -
1622928914.860387-CDS-H-canaliculatus_F_contig12034:1394..16801622928914.860387-CDS-H-canaliculatus_F_contig12034:1394..1680Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 1395..1680 -
1696845611.1905284-CDS-H-canaliculatus_F_contig12034:1394..16801696845611.1905284-CDS-H-canaliculatus_F_contig12034:1394..1680Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 1395..1680 -
1622928914.8729513-CDS-H-canaliculatus_F_contig12034:1728..19311622928914.8729513-CDS-H-canaliculatus_F_contig12034:1728..1931Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 1729..1931 -
1696845611.1990137-CDS-H-canaliculatus_F_contig12034:1728..19311696845611.1990137-CDS-H-canaliculatus_F_contig12034:1728..1931Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 1729..1931 -
1622928914.8876345-CDS-H-canaliculatus_F_contig12034:2421..25981622928914.8876345-CDS-H-canaliculatus_F_contig12034:2421..2598Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 2422..2598 -
1696845611.2084465-CDS-H-canaliculatus_F_contig12034:2421..25981696845611.2084465-CDS-H-canaliculatus_F_contig12034:2421..2598Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 2422..2598 -
1622928914.900483-CDS-H-canaliculatus_F_contig12034:2848..33471622928914.900483-CDS-H-canaliculatus_F_contig12034:2848..3347Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 2849..3347 -
1696845611.2233825-CDS-H-canaliculatus_F_contig12034:2848..33471696845611.2233825-CDS-H-canaliculatus_F_contig12034:2848..3347Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 2849..3347 -
1622928914.9148543-CDS-H-canaliculatus_F_contig12034:3455..37491622928914.9148543-CDS-H-canaliculatus_F_contig12034:3455..3749Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 3456..3749 -
1696845611.2318192-CDS-H-canaliculatus_F_contig12034:3455..37491696845611.2318192-CDS-H-canaliculatus_F_contig12034:3455..3749Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12034 3456..3749 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12034.1779.1prot_H-canaliculatus_F_contig12034.1779.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12034 144..3749 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12034.1779.1

>prot_H-canaliculatus_F_contig12034.1779.1 ID=prot_H-canaliculatus_F_contig12034.1779.1|Name=mRNA_H-canaliculatus_F_contig12034.1779.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=600bp
GNTPPTDLLQHVPHDADRADLLCLGCGDLRDLLYSILLHGRRGVGCGPVP
RHLSFTLNDWEPAIHARNLMLLQMILDARDLVDVGGEVDGITRRMDALKV
STASAPKKESAESASKKKASPDSRDTTTDSSPHLAPAFAQKVGAIFSAMF
NMFVDGDTLEMIREVAARLAVSAASPEEWSSTELGQIVQFADDRSQNRVR
QIFARYGDARLQEKGVFMKIRQQRSAFLATYIGKGPNSFLSRAMGLASLR
QGDSIKANDKMRRQYLKEGILDPFPLLLSGQGVPAKPRGPFRKVNPLLLV
TERKGEASSLHYGAFPLDAFHTDVSWWKLRPESLQDEYGKLAPRVTKHDP
TSADVSGGANLGVEALQNSWLGTALEELAQMCGAFLAATPAKPGNTAPRL
TIIVHVGDSLNYCDALLTASSKSPGSTEDDRTANGNSTGIGVSPGATFAP
VSFQQGSVHPLHLRDNIFSCPPEFDVISTNNLAEHLGIVNLLVASAPLLK
TSPHAVLLTSLMSSLANLHNYKNLTEFQEKVLCMSSQAAGILIGVVPVSS
LSSLVGHADTMTLIAGSMGTMFSRQKGSPISTPSQLRLVWKRPTTALPEP
back to top

mRNA from alignment at H-canaliculatus_F_contig12034:144..3749-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12034.1779.1 ID=mRNA_H-canaliculatus_F_contig12034.1779.1|Name=mRNA_H-canaliculatus_F_contig12034.1779.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3606bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12034:144..3749- (Hapterophycus canaliculatus Oshoro5f female)
GGAAACACGCCCCCGACGGACCTCCTCCAGCACGTTCCGCACGATGCCGA CCGTGCCGACCTCCTCTGCCTGGGCTGCGGCGACCTCCGAGACCTCCTCT ACTCTATTCTTCTGCATGGAAGACGGGGGGTGGGCTGCGGGCCTGTGCCT CGTCACCTATCGTTCACCCTGAACGATTGGGAGCCCGCCATCCACGCAAG GAACCTCATGCTCCTGCAGATGATCCTCGACGCTCGGGACCTGGTTGACG TTGGGGGTGAGGTCGACGGTATTACGCGCAGGATGGATGCCTTGGTTAGT GTCGGGGACTCCAAAGATGCCGCGAGACTGGAGATAGGCAGGCAGATGGG CGAGAAACAGGGCCCCAGGAGGAAGGCAGGCAAGAAAAAGGCAGGCAAGA AGAAGGTATCAACGGCAAGTGCACCCAAGAAGGAATCTGCGGAAAGCGCG AGTAAGAAGAAGGCATCACCGGACAGCCGTGATACAACCACCGACTCCAG CCCTCATCTTGCACCGGCATTCGCCCAGAAGGTCGGAGCGATCTTCAGCG CGATGTTCAACATGTTCGTCGACGGCGATACGCTGGAGATGATCCGTGAA GTGGCTGCCAGGCTTGCAGTGTCGGCCGCATCCCCCGAGGAGTGGTCCTC GACCGAACTTGGACAAATCGTCCAGTTCGCAGACGACCGCAGCCAAAACC GGGTCCGCCAAATCTTTGCCCGCTACGGCGACGCGCGCCTCCAGGAAAAA GGAGTTTTCATGAAGATTCGGCAACAGAGATCCGCTTTCCTGGCCACCTA CATAGGCAAGGGCCCAAACAGTTTCTTATCCCGTGCCATGGGGCTAGCGT CGCTGCGCCAAGGCGACAGCATCAAGGCGAACGACAAGATGAGGCGGCAA TGTGAGTCTCGGCTTGCGTGTATGACGTCAAAAGAGATAGCATTTCCGTC CATATGGGCGCAATCACAACTTCACCAAACGATTAAGGCCGAGGGTGATA CTGTGACTACATAGTTGTATTTCTGTGTAAATCGACGCTTTCGCTTCATG GACCGGTCATTATGTGAGCTGGCATCATAACCCGTTTAGTGGGCAACTTC GATTGTAAATGTTGGCATCTTCGTTCTCGTTTTTCTACTGCCTGATTGCA GACCTCAAGGAGGGTATTCTCGATCCCTTCCCGCTGCTGCTCAGCGGGCA GGGAGTACCGGCCAAGCCAAGAGGTCCCTTCAGGAAAGTTAATCCGCTGC TGTTGGTGACTGAAAGGAAAGGCGAGGCTTCCAGCCTGCACTACGGAGCC TTTCCGCTCGACGCGTTCCACACAGACGGTGCGCTACATCCTACGCCTGC ATTGCTGTGTCGGTAGGATTGAATTATACGCGACGCAGTTACTGTAAGTA TCGGGGTCTTGGCAAAGAGGTGCGGTGTTTTTATGCGGCCCGGTATCTCG ACAACGGGAAGGGTGCAGACATCGAAATGCCGACGTCCGGAATGCACGCG ACACGATCTTCCCAATGGAACCCCCTCCGTTGTCGAGGTATCGGACCGGG AAAAACACCGAACCCCTTGGACAAGACCCCGATCTTTTACATATCGTTAC TGCCTACCGTCTTGTGGAGCAGGCGGCGCGCTTATGGGTAATGCGTGCGA CCATTGTGTTTTGCGGCAAGAGTACACGGAAATTGGTTGTTCTCACACCT TAGTGCGCGAATCATGTCCATCCTCTCACAGCATCTGTGTTGCTGCCTGC ACTTTCGGCCTTGTGCCGCCTTCGCTTTCTCCATTCATCCACCATACCAT GTGCCCTCATAACAACAGTGTCGTGGTGGAAGCTGCGACCAGAAAGCCTC CAGGACGAGTACGGCAAGCTCGCGCCGAGAGTCACCAAGCACGATCCTAC CTCTGCCGACGTCTCAGGAGGGGCAAATCTCGGCGTGGAAGCCCTGCAGA ACTCGTGGCTTGGCACGGCATTGGAAGAGCTGGCTCAGATGTGCGGTGCT TTTTTGGCAGCCACCCCCGCGGTCTCGCCACCGGCTGACTTGGCTTGCGA CCCCGTCGAAAGCGGGGAGAAGCCAGGCAATACAGCGCCTCGCTTGACCA TCATCGTCCACGTAGGCGATTCCCTCAACTACTGCGACGCTCTACTGACG GCTTCTTCAAAATCGCCGGGGTCGACGGAAGACGATCGCACGGCAAACGG CAACAGCACCGGTATTGGTGTTTCTCCGGGAGCAACCTTTGCTCCCGTCT CGTTCCAGCAAGGGTCGGTGCACCCGCTTCATCTTCGGGACAACATCTTC AGCTGTCCGCCGGAGTTCGATGTCATCAGCACGAACAACCTTGCAGAGCA CCTCGGTGGGTGAAATCGAGCACGAGTTCCGCGACGCCTTCGTGAACTTT TCACCGAAATCCTAGCTGAAGCAGTGTCCATTGATTCTGCTCCTGGTCAG CCAACTTGCAGAGCTTAATACCCCGCTAGCGCTTCCCACAAGAGGGGAGA GGTCATGATACCGTGGCGGCCATAGTGAGAGAACCACGGCGGCCATTTAT TCCAAGAGTTTGGTGCGTCATGTTGTGCGTCAGGCTGCGTTCAGGCTCGA TCCCTGCTACGTTCAACGAGGCATCGTCAAGGTTCGTTGTCGTCGTCAAC TGTCAAAACAACGCATGCGCTTTTCACCGTCATAACAAACTCTCAGGTAT CGTCAATCTGCTGGTGGCTTCGGCACCGCTCCTGAAGACTTCACCGCATG CGGTGCTGCTCACTAGCCTCATGTCTTCGCTGGCGAACTTGCATAATTAC AAGAATTTGACCGAGTTCCAGGAGAAGGTATTGTGCATGAGCTCACAGGC CGCGGGAATACTAATTGGTGAGTGAATTTTTCGTACGGAAGTGGTGCTTC AGGTGTATACCCACCGTTCTCAGCAAAATAGTTGGATACTCATGACGTCC TTGATACCGGTATTTCTGCAAGTGCTACACATCTTGAAATTGTCGGTCCG TGTAAAATTTAGCGCAGAGAATGAATTCTCAAGGCAATAGTCTAGTCGTT TCAGTCACATTTGATCAATTTGATCGCAAAGTCTACGACGGTGGCGGAAA TGTTCGACAACGTCCGCCCTCGAGGGGGTTCATTGTTGAAGGAGAAAGCG AAAATGTCTATTCATCAATCATTTTCATTAATGGTCTACCGAGTTCAGGA TACACTCGTGAGTAGGCACTCATCAGATGGAATGGACTGCTGAACCCGAC TCGCTTTCAAAACTTAAAGCAAGCACAGCAAGAGGATCAGTTAGGCAAGT AAAGAAAAACCTTTGTGTTCACCTTGCTCTTGTGCCACCCCGGTTGGAGC GTCAAACACTTAAAACGAAACCGTTGCTAGAAGAGCGGGACGAACACGTA CGTACACTCGTAAAGGCTGCGCTGCCCCGGCCGCAGGTGTGGTACCCGTA TCGAGCCTTTCGTCGTTGGTGGGTCATGCCGACACCATGACGCTCATCGC GGGGAGCATGGGAACCATGTTTTCTCGGCAAAAAGGTTCACCCATATCGA CGCCGAGCCAATTGCGGCTTGTGTGGAAGCGCCCGACGACAGCTTTACCG GAACCC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12034:144..3749-

>mRNA_H-canaliculatus_F_contig12034.1779.1 ID=mRNA_H-canaliculatus_F_contig12034.1779.1|Name=mRNA_H-canaliculatus_F_contig12034.1779.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3600bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12034:144..3749- (Hapterophycus canaliculatus Oshoro5f female)
GGAAACACGCCCCCGACGGACCTCCTCCAGCACGTTCCGCACGATGCCGA
CCGTGCCGACCTCCTCTGCCTGGGCTGCGGCGACCTCCGAGACCTCCTCT
ACTCTATTCTTCTGCATGGAAGACGGGGGGTGGGCTGCGGGCCTGTGCCT
CGTCACCTATCGTTCACCCTGAACGATTGGGAGCCCGCCATCCACGCAAG
GAACCTCATGCTCCTGCAGATGATCCTCGACGCTCGGGACCTGGTTGACG
TTGGGGGTGAGGTCGACGGTATTACGCGCAGGATGGATGCCTTGGGAAAC
ACGCCCCCGACGGACCTCCTCCAGCACGTTCCGCACGATGCCGACCGTGC
CGACCTCCTCTGCCTGGGCTGCGGCGACCTCCGAGACCTCCTCTACTCTA
TTCTTCTGCATGGAAGACGGGGGGTGGGCTGCGGGCCTGTGCCTCGTCAC
CTATCGTTCACCCTGAACGATTGGGAGCCCGCCATCCACGCAAGGAACCT
CATGCTCCTGCAGATGATCCTCGACGCTCGGGACCTGGTTGACGTTGGGG
GTGAGGTCGACGGTATTACGCGCAGGATGGATGCCTTGAAGGTATCAACG
GCAAGTGCACCCAAGAAGGAATCTGCGGAAAGCGCGAGTAAGAAGAAGGC
ATCACCGGACAGCCGTGATACAACCACCGACTCCAGCCCTCATCTTGCAC
CGGCATTCGCCCAGAAGGTCGGAGCGATCTTCAGCGCGATGTTCAACATG
TTCGTCGACGGCGATACGCTGGAGATGATCCGTGAAGTGGCTGCCAGGCT
TGCAGTGTCGGCCGCATCCCCCGAGGAGTGGTCCTCGACCGAACTTGGAC
AAATCGTCCAGTTCGCAGACGACCGCAGCCAAAACCGGGTCCGCCAAATC
TTTGCCCGCTACGGCGACGCGCGCCTCCAGGAAAAAGGAGTTTTCATGAA
GATTCGGCAACAGAGATCCGCTTTCCTGGCCACCTACATAGGCAAGGGCC
CAAACAGTTTCTTATCCCGTGCCATGGGGCTAGCGTCGCTGCGCCAAGGC
GACAGCATCAAGGCGAACGACAAGATGAGGCGGCAATAAGGTATCAACGG
CAAGTGCACCCAAGAAGGAATCTGCGGAAAGCGCGAGTAAGAAGAAGGCA
TCACCGGACAGCCGTGATACAACCACCGACTCCAGCCCTCATCTTGCACC
GGCATTCGCCCAGAAGGTCGGAGCGATCTTCAGCGCGATGTTCAACATGT
TCGTCGACGGCGATACGCTGGAGATGATCCGTGAAGTGGCTGCCAGGCTT
GCAGTGTCGGCCGCATCCCCCGAGGAGTGGTCCTCGACCGAACTTGGACA
AATCGTCCAGTTCGCAGACGACCGCAGCCAAAACCGGGTCCGCCAAATCT
TTGCCCGCTACGGCGACGCGCGCCTCCAGGAAAAAGGAGTTTTCATGAAG
ATTCGGCAACAGAGATCCGCTTTCCTGGCCACCTACATAGGCAAGGGCCC
AAACAGTTTCTTATCCCGTGCCATGGGGCTAGCGTCGCTGCGCCAAGGCG
ACAGCATCAAGGCGAACGACAAGATGAGGCGGCAATACCTCAAGGAGGGT
ATTCTCGATCCCTTCCCGCTGCTGCTCAGCGGGCAGGGAGTACCGGCCAA
GCCAAGAGGTCCCTTCAGGAAAGTTAATCCGCTGCTGTTGGTGACTGAAA
GGAAAGGCGAGGCTTCCAGCCTGCACTACGGAGCCTTTCCGCTCGACGCG
TTCCACACAGACGACCTCAAGGAGGGTATTCTCGATCCCTTCCCGCTGCT
GCTCAGCGGGCAGGGAGTACCGGCCAAGCCAAGAGGTCCCTTCAGGAAAG
TTAATCCGCTGCTGTTGGTGACTGAAAGGAAAGGCGAGGCTTCCAGCCTG
CACTACGGAGCCTTTCCGCTCGACGCGTTCCACACAGACGTGTCGTGGTG
GAAGCTGCGACCAGAAAGCCTCCAGGACGAGTACGGCAAGCTCGCGCCGA
GAGTCACCAAGCACGATCCTACCTCTGCCGACGTCTCAGGAGGGGCAAAT
CTCGGCGTGGAAGCCCTGCAGAACTCGTGGCTTGGCACGGCATTGGAAGA
GCTGGCTCAGATGTGCGGTGCTTTTTTGGCAGCCACCCCCGCGTGTCGTG
GTGGAAGCTGCGACCAGAAAGCCTCCAGGACGAGTACGGCAAGCTCGCGC
CGAGAGTCACCAAGCACGATCCTACCTCTGCCGACGTCTCAGGAGGGGCA
AATCTCGGCGTGGAAGCCCTGCAGAACTCGTGGCTTGGCACGGCATTGGA
AGAGCTGGCTCAGATGTGCGGTGCTTTTTTGGCAGCCACCCCCGCGAAGC
CAGGCAATACAGCGCCTCGCTTGACCATCATCGTCCACGTAGGCGATTCC
CTCAACTACTGCGACGCTCTACTGACGGCTTCTTCAAAATCGCCGGGGTC
GACGGAAGACGATCGCACGGCAAACGGCAACAGCACCGGTATTGGTGTTT
CTCCGGGAGCAACCTTTGCTCCCGTCTCGTTCCAGCAAGGGTCGGTGCAC
CCGCTTCATCTTCGGGACAACATCTTCAGCTGTCCGCCGGAGTTCGATGT
CATCAGCACGAACAACCTTGCAGAGCACCTCGAAGCCAGGCAATACAGCG
CCTCGCTTGACCATCATCGTCCACGTAGGCGATTCCCTCAACTACTGCGA
CGCTCTACTGACGGCTTCTTCAAAATCGCCGGGGTCGACGGAAGACGATC
GCACGGCAAACGGCAACAGCACCGGTATTGGTGTTTCTCCGGGAGCAACC
TTTGCTCCCGTCTCGTTCCAGCAAGGGTCGGTGCACCCGCTTCATCTTCG
GGACAACATCTTCAGCTGTCCGCCGGAGTTCGATGTCATCAGCACGAACA
ACCTTGCAGAGCACCTCGGTATCGTCAATCTGCTGGTGGCTTCGGCACCG
CTCCTGAAGACTTCACCGCATGCGGTGCTGCTCACTAGCCTCATGTCTTC
GCTGGCGAACTTGCATAATTACAAGAATTTGACCGAGTTCCAGGAGAAGG
TATTGTGCATGAGCTCACAGGCCGCGGGAATACTAATTGGTATCGTCAAT
CTGCTGGTGGCTTCGGCACCGCTCCTGAAGACTTCACCGCATGCGGTGCT
GCTCACTAGCCTCATGTCTTCGCTGGCGAACTTGCATAATTACAAGAATT
TGACCGAGTTCCAGGAGAAGGTATTGTGCATGAGCTCACAGGCCGCGGGA
ATACTAATTGGTGTGGTACCCGTATCGAGCCTTTCGTCGTTGGTGGGTCA
TGCCGACACCATGACGCTCATCGCGGGGAGCATGGGAACCATGTTTTCTC
GGCAAAAAGGTTCACCCATATCGACGCCGAGCCAATTGCGGCTTGTGTGG
AAGCGCCCGACGACAGCTTTACCGGAACCCGTGTGGTACCCGTATCGAGC
CTTTCGTCGTTGGTGGGTCATGCCGACACCATGACGCTCATCGCGGGGAG
CATGGGAACCATGTTTTCTCGGCAAAAAGGTTCACCCATATCGACGCCGA
GCCAATTGCGGCTTGTGTGGAAGCGCCCGACGACAGCTTTACCGGAACCC
back to top