mRNA_H-canaliculatus_F_contig12019.1770.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12019.1770.1 vs. uniprot
Match: A0A6H5JHX5_9PHAE (Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX5_9PHAE) HSP 1 Score: 102 bits (254), Expect = 5.090e-20 Identity = 49/74 (66.22%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 85 IMGSDEWEELLGSSVRKSIVVNGDGDSPDLGSLVLFSWKGNVLLDDNAT-GETFAERDRVTARIGDGDEVPGRE 303
+ SD+WEELLGS+VRK +VV+GDG+SPDLGSLVLF+W G+ LLD+ T G FA R+R ARIGDGDE+PG E
Sbjct: 2 VAESDQWEELLGSAVRKKVVVDGDGESPDLGSLVLFTWTGSPLLDNGTTTGVPFAHRERARARIGDGDEIPGVE 75
BLAST of mRNA_H-canaliculatus_F_contig12019.1770.1 vs. uniprot
Match: A0A6H5KLD8_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLD8_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 4.460e-12 Identity = 59/94 (62.77%), Postives = 65/94 (69.15%), Query Frame = -3
Query: 724 NMNIEGEQNASASAPASPTTASTAP*QQAPQITSFFQLERTSRTQAAPATASPAAADIPAA-AGIATGASMTAPASPHQQPVADLLSAARTSAA 1002
NMN++ EQNA+AS A TTA T Q QITSFF TS TQ AP +PA AD+ AA AG ATGA+MTAPASP QQPVA LLSAAR S A
Sbjct: 5 NMNVQAEQNAAASTSAPSTTAWTTAAQAPQQITSFFGPAHTSSTQEAP---TPAPADLKAAGAGAATGANMTAPASPQQQPVALLLSAARASTA 95
BLAST of mRNA_H-canaliculatus_F_contig12019.1770.1 vs. uniprot
Match: A0A6H5L7P0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P0_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 1.920e-11 Identity = 58/100 (58.00%), Postives = 68/100 (68.00%), Query Frame = -3
Query: 721 VETSKNMNIEGEQNASASAPASPTTASTAP*QQAPQITSFFQLERTSRTQAAPATASPAAADIPAA-AGIATGASMTAPASPHQQPVADLLSAARTSAAP 1017
+E S NMN++ +QNA+AS A TTASTA Q +ITSFF S TQ AP +PA AD+ AA AG ATG +MTA ASP QQPVA LLSAAR + AP
Sbjct: 1 MEHSNNMNVQAQQNAAASTSAPSTTASTAAAQAPKEITSFFGPAHISSTQEAP---TPAPADLTAARAGTATGVNMTASASPQQQPVALLLSAARMNTAP 97
BLAST of mRNA_H-canaliculatus_F_contig12019.1770.1 vs. uniprot
Match: A0A6H5J5Q5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5Q5_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 3.700e-11 Identity = 63/112 (56.25%), Postives = 72/112 (64.29%), Query Frame = -3
Query: 724 TTPQPMCAGGTPRVETSKNMNIEGEQNASASAPASPTTASTAP*QQAPQITSFFQLERTSRTQAAPATASPAAADIPAA-AGIATGASMTAPASPHQQPVADLLSAARTSAA 1056
TT +C G T R+E NMN++ EQNA+AS A TTASTA Q QI S F T TQ AP +PA AD+ AA AG ATGA+MTA ASP QQPVA +LSAAR S A
Sbjct: 196 TTTAAVC-GETLRMENPNNMNVQAEQNAAASTSAPSTTASTAAAQAPQQIASCFGPAHTCSTQEAP---TPAPADLIAARAGTATGANMTASASPWQQPVALVLSAARMSIA 303
BLAST of mRNA_H-canaliculatus_F_contig12019.1770.1 vs. uniprot
Match: A0A6H5J8Q8_9PHAE (TRAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Q8_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 1.750e-8 Identity = 58/152 (38.16%), Postives = 74/152 (48.68%), Query Frame = -3
Query: 724 IFVTPHTFTGPLLLPRGY*N-------------LCPVGTPCTTPQPMCAGGTPRVETSKNMNIEGEQNASASAPASPTTASTAP*QQAPQITSFFQLERTSRTQAAPATASPAAADIPAAAGIATGASMTAPASPHQQPVADLLSAARTSAA 1140
+ + PH G L+ + + N +CP + T P CAG TPR+ETS NMN+ E+ QA QITSFF+ ++ S TQA +A+GA+MTA ASPHQQPVAD LSAARTS A
Sbjct: 122 VVMVPHVIPGELVKCKVFRNHANYSEATLVGNVICPWASHKT--HPPCAGKTPRMETSNNMNVREEEQTXXXXXXXXXXXXXX---QASQITSFFETKQPSSTQAP----------------LASGANMTATASPHQQPVADSLSAARTSTA 252
BLAST of mRNA_H-canaliculatus_F_contig12019.1770.1 vs. uniprot
Match: A0A6H5JI86_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI86_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 2.630e-8 Identity = 54/108 (50.00%), Postives = 70/108 (64.81%), Query Frame = -3
Query: 730 VETSKNMNIEGEQNASASAPASPT-------TASTAP*QQAPQITSFFQLERTSRTQAAP--ATASPAAA-DIPAA--AGIATGASMTAPASPHQQPVADLLSAARTS 1017
++T KNMN++ EQ+ + + ++P TAST Q QITSFF +S T+ AP T +PAAA D+ AA AG ATGA+MTA ASP QQPVA L+SAAR+S
Sbjct: 1 MQTPKNMNMQAEQSVAGTTGSTPAPSTAASATASTVAAQAPQQITSFFGPAHSSSTREAPPAGTLAPAAAVDLTAAEGAGAATGANMTASASPQQQPVAGLMSAARSS 108
BLAST of mRNA_H-canaliculatus_F_contig12019.1770.1 vs. uniprot
Match: A0A6H5JA43_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA43_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 3.530e-7 Identity = 54/108 (50.00%), Postives = 70/108 (64.81%), Query Frame = -3
Query: 730 VETSKNMNIEGEQNASASAPASPT-------TASTAP*QQAPQITSFFQLERTSRTQAAP--ATASPAAA-DIPAA--AGIATGASMTAPASPHQQPVADLLSAARTS 1017
++T KNMN++ EQ+ + + ++P TAST Q QITSFF +S T+ AP T +PAAA D+ AA AG ATGA+MTA ASP QQPVA L+SAAR+S
Sbjct: 1 MQTPKNMNMQAEQSVAGTTGSTPAPSTAASATASTVAAQAPQQITSFFGPAHSSSTREAPPAGTLAPAAAVDLTAAEGAGAATGANMTASASPQQQPVAGLMSAARSS 108
BLAST of mRNA_H-canaliculatus_F_contig12019.1770.1 vs. uniprot
Match: A0A6H5JQF9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF9_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 3.580e-7 Identity = 52/94 (55.32%), Postives = 58/94 (61.70%), Query Frame = -3
Query: 724 NMNIEGEQNASASAPASPTTASTAP*QQAPQITSFFQLERTSRTQAAPATASPAAADIPAA-AGIATGASMTAPASPHQQPVADLLSAARTSAA 1002
NMN++ EQNA+AS Q+ QITSFF TS Q AP +PA A + AA AG ATGA MTAPASP QQPVA LLSAAR S A
Sbjct: 5 NMNVQAEQNAAASXXXXXXXXXXXXXQEPQQITSFFGPAHTSSAQEAP---TPAPAYLTAAGAGAATGADMTAPASPQQQPVALLLSAARASTA 95
BLAST of mRNA_H-canaliculatus_F_contig12019.1770.1 vs. uniprot
Match: A0A6H5JVS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS4_9PHAE) HSP 1 Score: 62.0 bits (149), Expect = 1.660e-6 Identity = 53/108 (49.07%), Postives = 69/108 (63.89%), Query Frame = -3
Query: 730 VETSKNMNIEGEQNASASAPASPT-------TASTAP*QQAPQITSFFQLERTSRTQAAP--ATASPAAA-DIPAA--AGIATGASMTAPASPHQQPVADLLSAARTS 1017
++T KNMN++ EQ+ + + ++P TAST Q QITSF +S T+ AP T +PAAA D+ AA AG ATGA+MTA ASP QQPVA L+SAAR+S
Sbjct: 1 MQTPKNMNMQAEQSVAGTTGSTPAPSTAASATASTVAAQAPQQITSFLGPAHSSSTREAPPAGTLAPAAAVDLTAAEGAGAATGANMTASASPQQQPVAGLMSAARSS 108
BLAST of mRNA_H-canaliculatus_F_contig12019.1770.1 vs. uniprot
Match: A0A6H5JD52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD52_9PHAE) HSP 1 Score: 54.7 bits (130), Expect = 4.730e-6 Identity = 37/51 (72.55%), Postives = 40/51 (78.43%), Query Frame = -3
Query: 769 APQITSFFQLERTSRTQAAPATA-SPAAADIPAAAGIATGASMTAPASPHQ 918
A QI SFFQ E+TS TQAAPATA SPAA + AAA ATGA+MTA ASPHQ
Sbjct: 28 AQQIMSFFQPEQTSSTQAAPATAPSPAAVYLTAAADTATGANMTATASPHQ 78 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12019.1770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12019.1770.1 >prot_H-canaliculatus_F_contig12019.1770.1 ID=prot_H-canaliculatus_F_contig12019.1770.1|Name=mRNA_H-canaliculatus_F_contig12019.1770.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=126bp MGSDEWEELLGSSVRKSIVVNGDGDSPDLGSLVLFSWKGNVLLDDNATGEback to top mRNA from alignment at H-canaliculatus_F_contig12019:1219..3544+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12019.1770.1 ID=mRNA_H-canaliculatus_F_contig12019.1770.1|Name=mRNA_H-canaliculatus_F_contig12019.1770.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2326bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12019:1219..3544+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12019:1219..3544+ >mRNA_H-canaliculatus_F_contig12019.1770.1 ID=mRNA_H-canaliculatus_F_contig12019.1770.1|Name=mRNA_H-canaliculatus_F_contig12019.1770.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=756bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12019:1219..3544+ (Hapterophycus canaliculatus Oshoro5f female)back to top |