mRNA_H-canaliculatus_F_contig1201.1767.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1201.1767.1 vs. uniprot
Match: D7G615_ECTSI (Alternative oxidase isoform A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G615_ECTSI) HSP 1 Score: 527 bits (1357), Expect = 2.400e-176 Identity = 264/307 (85.99%), Postives = 280/307 (91.21%), Query Frame = 2
Query: 155 GTALTTTRRSLGTSKEIGEGLEEEKMRPGDRSQVHFRATPTKHPLGMGSPQSSSSSAT----RISTPGMKGKEWSMPNQIWSEEEVNNIKPTHKEPEEAVDHITLNGVRVLRWSFDVLAGFKTGVIDEHKYLNRVIFLETVAGIPGMVAGALRHLTSLRRMRSRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFAVMISQGVMYNAFFLSYIISPKACHRFVGYIEEEAVHTYTALLEDIDANKLPLFSNLPAPAMAKSYWKLGENAMFRDLVLAVRADEANHCVVNHTFADMHQEFKEDAVS 1063
G + TTRR T KEIG+GLEEEK+RPGDRSQVHFRATPTKHPLGMGSP++SS S+ G KGKEWSMP++IWS EEVN+IKPTHK+PEEAVDHI L GVR LRW FDVLAGFKTGVIDEHKYLNRVIFLETVAGIPGMVAG LRHLTSLRRMR RDHGWIHTLLEEAENERMHLLTFLKLKQPGP+FRFAVMISQGVMYNAFFLSY+ISPKACHRFVGYIEEEAVHTYT LLEDIDANKLPLFSNLPAPAMAKSYWKLG++AMFRDLVLAVRADEANHCVVNHTFADMHQEFK+DAV+
Sbjct: 52 GGTVRTTRREFATKKEIGKGLEEEKIRPGDRSQVHFRATPTKHPLGMGSPKNSSVSSEGGGRSSGGKGKKGKEWSMPHEIWSAEEVNSIKPTHKDPEEAVDHIALRGVRALRWFFDVLAGFKTGVIDEHKYLNRVIFLETVAGIPGMVAGTLRHLTSLRRMR-RDHGWIHTLLEEAENERMHLLTFLKLKQPGPVFRFAVMISQGVMYNAFFLSYLISPKACHRFVGYIEEEAVHTYTVLLEDIDANKLPLFSNLPAPAMAKSYWKLGDDAMFRDLVLAVRADEANHCVVNHTFADMHQEFKQDAVN 357
BLAST of mRNA_H-canaliculatus_F_contig1201.1767.1 vs. uniprot
Match: A0A6H5KXL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL8_9PHAE) HSP 1 Score: 503 bits (1295), Expect = 7.710e-165 Identity = 260/331 (78.55%), Postives = 275/331 (83.08%), Query Frame = 2
Query: 155 GTALTTTRRSLGTSKEIGEGLEEEKMRPGDRSQVHFRATPTKHPLGMGSPQSSSSSATRISTPGMKGKEWSMPNQIWSEEEVNNIKPTHKEPEEAVDHITLNGVRVLRWSFDVLAGFKTGVIDEHKY---------------------------LNRVIFLETVAGIPGMVAGALRHLTSLRRMRSRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFAVMISQGVMYNAFFLSYIISPKACHRFVGYIEEEAVHTYTALLEDIDANKLPLFSNLPAPAMAKSYWKLGENAMFRDLVLAVRADEANHCVVNHTFADMHQEFKEDAVSH 1066
G + TRR+ T KEIG+GLEEE++RPGDRSQVHFRATPTKHPLGMG P++SS G K KEWSMP+ IWS EEVN+IKPTHK+PEEAVDHI L GVR LRW FDVLAGFKTGVIDEHK LNRVIFLETVAGIPGMVAG LRHLTSLRRMR RDHGWIHTLLEEAENERMHLLTFLKLKQPGP+FRFAVMISQGVMYNAFFLSY+ISPKACHRFVGYIEEEAVHTYT LLEDIDANKLPLFSNLPAPAMAKSYWKLG++AMFRDLVLAVRADEANHCVVNHTFADMHQEFKEDAVS+
Sbjct: 52 GGTVRATRRAFATKKEIGKGLEEEEIRPGDRSQVHFRATPTKHPLGMGLPKNSSGEK------GKKEKEWSMPHGIWSAEEVNSIKPTHKDPEEAVDHIALRGVRALRWCFDVLAGFKTGVIDEHKCASTTVQLKFSSEFLRSRNPRVNPSRADLNRVIFLETVAGIPGMVAGTLRHLTSLRRMR-RDHGWIHTLLEEAENERMHLLTFLKLKQPGPVFRFAVMISQGVMYNAFFLSYLISPKACHRFVGYIEEEAVHTYTVLLEDIDANKLPLFSNLPAPAMAKSYWKLGDDAMFRDLVLAVRADEANHCVVNHTFADMHQEFKEDAVSY 375
BLAST of mRNA_H-canaliculatus_F_contig1201.1767.1 vs. uniprot
Match: A0A836CI40_9STRA (Alternative oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI40_9STRA) HSP 1 Score: 327 bits (839), Expect = 2.640e-100 Identity = 153/235 (65.11%), Postives = 192/235 (81.70%), Query Frame = 2
Query: 359 EWSMPNQIWSEEEVNNIKPTHKEPEEAVDHITLNGVRVLRWSFDVLAGFKTGVIDEHKYLNRVIFLETVAGIPGMVAGALRHLTSLRRMRSRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFAVMISQGVMYNAFFLSYIISPKACHRFVGYIEEEAVHTYTALLEDIDANKLPLFSNLPAPAMAKSYWKLGENAMFRDLVLAVRADEANHCVVNHTFADMHQEFKEDAVS 1063
EW++ + +WS EE++ +K TH++P + D I L VR RW+FD +AGFKTG I E KYLNRVIFLETVA IPGMVAG LRHL SLR+M+ RDHGWIHTLLEEAENERMHLLTFL +K+PGP+FR AV +QG+++N FF +Y+++PK CHRFVGYIEEEAVHTYT+LL+DID +LP+F NL P++A YWKL +A+FRDL+LA+R DEANH +VNHTFAD+H EFK + V+
Sbjct: 89 EWTV-DSVWSREELHGVKVTHRDPTDIADKIALKAVRFCRWTFDWVAGFKTGSITEDKYLNRVIFLETVAAIPGMVAGTLRHLNSLRKMK-RDHGWIHTLLEEAENERMHLLTFLYMKKPGPVFRIAVTATQGLIWNLFFFTYLVNPKICHRFVGYIEEEAVHTYTSLLKDIDEGRLPMFENLGVPSIAVDYWKLPRDALFRDLILAIRCDEANHRLVNHTFADLHAEFKSEEVN 321
BLAST of mRNA_H-canaliculatus_F_contig1201.1767.1 vs. uniprot
Match: W7TTV4_9STRA (Alternative oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTV4_9STRA) HSP 1 Score: 297 bits (760), Expect = 9.730e-89 Identity = 150/276 (54.35%), Postives = 197/276 (71.38%), Query Frame = 2
Query: 218 EEEKMRPGDRSQVHFRATPTKHPLGMGSPQSSSSSATRISTPGMKGKEWSMP--NQIWSEEEVNNIKPTHKEPEEAVDHITLNGVRVLRWSFDVLAGFKTGVIDEHKYLNRVIFLETVAGIPGMVAGALRHLTSLRRMRSRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFAVMISQGVMYNAFFLSYIISPKACHRFVGYIEEEAVHTYTALLEDIDANKLPLFSNLPAPAMAKSYWKLGENAMFRDLVLAVRADEANHCVVNHTFADMHQ 1039
E+E++R G RS +HF+ +P +H L + K K W P + +W++EEV N++ TH P + + + LR+SFDVLAGFK E YLNR++FLETVAGIPGM AG +RHL SLRRM+ RDHGWIHTLLEEAENERMHLLTF++LK+PGP+FR AV++ QGV +N FFLSY+I+PK CHR VG+IEEEAV TYT ++E++DA +LPLF+++ P +A SYWKL +A FRDL+LA+R DEA H VNHTFA++ +
Sbjct: 78 EKEELRDGARSIIHFKLSPNRHALN-------------VPKLDPKEKVWENPTHHSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQ-RDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANLKE 339
BLAST of mRNA_H-canaliculatus_F_contig1201.1767.1 vs. uniprot
Match: A0A6U4U061_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4U061_HEMAN) HSP 1 Score: 283 bits (724), Expect = 1.820e-83 Identity = 147/260 (56.54%), Postives = 182/260 (70.00%), Query Frame = 2
Query: 254 VHFRATPTKHPLGMGSPQSSSSSATRISTPGMKGKEWSMPNQIWSEEEVNNIKPTHKEPEEAVDHITLNGVRVLRWSFDVLAGFKTGVIDEHKYLNRVIFLETVAGIPGMVAGALRHLTSLRRMRSRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFAVMISQGVMYNAFFLSYIISPKACHRFVGYIEEEAVHTYTALLEDIDANKLPLFSNLPAPAMAKSYWKLGENAMFRDLVLAVRADEANHCVVNHTFADM 1033
VHFRATP +HPL + + S S+ I+ G +G +P+ IW+ EEVN++ TH EP D L V+ RW FD + ++ G I + K LNR IFLETVAG+PGM AG LRHL SLR M + DHGWIHTLLEEAENERMHLLTF++LKQP FR V+I+QGV NAFF++Y+ISP CHRFVGY+EEEAVHTY ++L+ ID +L F PAP +A YW++ +A RDL LAVRADEANH VNHTFA +
Sbjct: 97 VHFRATPNQHPLDI--KKMSDSTPEEIAKYGHRG----VPHPIWTTEEVNSVVQTHVEPSGYADKFALACVKSARWGFDTFSLYRFGKISKKKVLNRAIFLETVAGVPGMTAGMLRHLKSLRSM-NHDHGWIHTLLEEAENERMHLLTFIQLKQPDLYFRTCVLIAQGVFMNAFFVAYLISPSFCHRFVGYLEEEAVHTYESILDHIDNGELKEFGREPAPTIAIDYWRMAPDATMRDLFLAVRADEANHRDVNHTFASL 349
BLAST of mRNA_H-canaliculatus_F_contig1201.1767.1 vs. uniprot
Match: A0A7S0V1I1_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V1I1_9CRYP) HSP 1 Score: 282 bits (721), Expect = 2.480e-83 Identity = 148/294 (50.34%), Postives = 193/294 (65.65%), Query Frame = 2
Query: 179 RSLGTSKEIGEGLEEEKMRPGDRS---------QVHFRATPTKHPLGMGSPQSSSSSATRISTPGMKGKEWSMPNQIWSEEEVNNIKPTHKEPEEAVDHITLNGVRVLRWSFDVLAGFKTGVIDEHKYLNRVIFLETVAGIPGMVAGALRHLTSLRRMRSRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFAVMISQGVMYNAFFLSYIISPKACHRFVGYIEEEAVHTYTALLEDIDANKLPLFSNLPAPAMAKSYWKLGENAMFRDLVLAVRADEANHCVVNHTFADM 1033
R++ TS + L + PG S VHFRA+P +HPL + + + ++ G +G +P+ IW+EEEV+N+ TH EP D + L V+ RW FD + ++ G + ++K LNR IFLETVAG+PGM AG LRHL SLR M DHGWIHTLLEEAENERMHLLTF++LK+P FR V+++QG+ NAFF++Y+ISP CHRFVGY+EEEAVHTY ++L+ ID +L F PAP +A YW+L +A RDL LAVRADEANH VNHTFA +
Sbjct: 44 RAINTSAPPPKPLNRKGPEPGKNSGKVSDIKHDMVHFRASPNQHPLDI--KKVGDHTPEEVAKYGHRG----VPHPIWTEEEVHNVAQTHVEPAGTADRVALAAVKAARWGFDTFSLYRFGKVTKNKVLNRAIFLETVAGVPGMTAGMLRHLKSLRSM-DHDHGWIHTLLEEAENERMHLLTFIQLKKPDLYFRTCVLVAQGIFMNAFFVAYLISPHFCHRFVGYLEEEAVHTYESILDHIDHGELTEFGKEPAPTIAIDYWRLAPDANMRDLFLAVRADEANHRDVNHTFASL 330
BLAST of mRNA_H-canaliculatus_F_contig1201.1767.1 vs. uniprot
Match: A0A6P8IMC6_ACTTE (alternative oxidase, mitochondrial-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IMC6_ACTTE) HSP 1 Score: 278 bits (710), Expect = 4.880e-82 Identity = 129/223 (57.85%), Postives = 176/223 (78.92%), Query Frame = 2
Query: 368 MPNQIWSEEEVNNIKPTHKEPEEAVDHITLNGVRVLRWSFDVLAGFKTGVIDEHKYLNRVIFLETVAGIPGMVAGALRHLTSLRRMRSRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFAVMISQGVMYNAFFLSYIISPKACHRFVGYIEEEAVHTYTALLEDIDANKLPLFSNLPAPAMAKSYWKLGENAMFRDLVLAVRADEANHCVVNHTFADMH 1036
+P+ IW+EE+VN +K THKEP++ +D + V++LR +FD+ + +K G + E+K+LNR+I LETVAG+PGM+ G RHL SLRR+ SRDHGWIHTLLEEAENERMHL+T L++K+PG +FR ++ +QGV N FF++Y+ISP+ CHRFVGY+EEEAV TYT L+ ID KLP + + AP +A +YWKLGE+AM RD++LA+RADEA+H VVNHT ++
Sbjct: 97 LPHPIWTEEDVNKVKITHKEPQDKIDKVAYYSVQLLRTAFDLASFYKIGPMTENKWLNRIIMLETVAGVPGMIGGMARHLKSLRRL-SRDHGWIHTLLEEAENERMHLMTALEMKKPGALFRGVIIAAQGVFVNMFFIAYMISPRFCHRFVGYLEEEAVKTYTYCLKCIDEGKLPKWEQMKAPQIAVNYWKLGEDAMMRDVILAIRADEAHHRVVNHTLGTIN 318
BLAST of mRNA_H-canaliculatus_F_contig1201.1767.1 vs. uniprot
Match: F2U7V2_SALR5 (Alternative oxidase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U7V2_SALR5) HSP 1 Score: 277 bits (708), Expect = 6.260e-82 Identity = 149/293 (50.85%), Postives = 202/293 (68.94%), Query Frame = 2
Query: 161 ALTTTRRSLGTSKEIGEGLEEEKMRPGDRSQVHFRATPTKHPLGMGSPQSSSSSATRISTPGMKGKEWSMP--NQIWSEEEVNNIKPTHKEPEEAVDHITLNGVRVLRWSFDVLAGFKTGVIDEHKYLNRVIFLETVAGIPGMVAGALRHLTSLRRMRSRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFAVMISQGVMYNAFFLSYIISPKACHRFVGYIEEEAVHTYTALLEDIDANKLPLFSNLPAPAMAKSYWKLGENAMFRDLVLAVRADEANHCVVNHTFADM 1033
A T+ R + TSK+ E LE + D S HFR + HPL +++ G W P N++WSEEEV ++K TH +P++ D + +R++R FD+ +G+ G I+EHK+L RVIFLETVAGIPGMVAG+LRHL SLR M+ RDHGWIHTLLEEAENERMHLLTF++L++PG +FR V+ +QGV +N +FL Y+ SP+ CHRFVGY+EEEAV TYT ++ +D +P ++N PAP +AK+YW L ++A+ RD++LAVRADEANH VNHT + +
Sbjct: 33 AATSQVRGVHTSKD-NEQLE---GKVHDVSVQHFRRSNNPHPL-----------FSKVDDHG--NPVWVNPVDNKVWSEEEVKDVKVTHIDPKDRHDRVAYYLIRMIRRGFDIFSGYAFGPINEHKFLRRVIFLETVAGIPGMVAGSLRHLKSLRLMK-RDHGWIHTLLEEAENERMHLLTFMQLREPGLLFRGMVLAAQGVFWNLYFLGYLASPRTCHRFVGYLEEEAVKTYTDAIKALDDGLMPTWTNKPAPDIAKTYWGLADDALMRDVLLAVRADEANHRDVNHTLSTL 307
BLAST of mRNA_H-canaliculatus_F_contig1201.1767.1 vs. uniprot
Match: L8HDC6_ACACA (Alternative oxidase isoform A, putative n=4 Tax=Acanthamoeba castellanii TaxID=5755 RepID=L8HDC6_ACACA) HSP 1 Score: 278 bits (710), Expect = 1.810e-81 Identity = 131/227 (57.71%), Postives = 175/227 (77.09%), Query Frame = 2
Query: 362 WSMPNQIWSEEEVNNIKPTHKEPEEAVDHITLNGVRVLRWSFDVLAGFKTGVIDEHKYLNRVIFLETVAGIPGMVAGALRHLTSLRRMRSRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFAVMISQGVMYNAFFLSYIISPKACHRFVGYIEEEAVHTYTALLEDIDANKLPLFSNLPAPAMAKSYWKLGENAMFRDLVLAVRADEANHCVVNHTFADMHQE 1042
+++P+ IW E V+ ++ H PE D + LN VR++R++FD ++G+ G + E +L R+IFLETVAG+PG VA LRHL SLRR++ RDHGWIHTLLEEAENERMHLLT LKLKQPG IFR AV ++QG+ +N FF +Y++SP+ CHRFVGY+EEEAV TYT LL D+DA KLP + + PAP +A+ YWK+G++A +RD+V +RADEA+H VNHTFA++ E
Sbjct: 140 YTLPHPIWQNEYVDAVEINHTPPENLTDKLALNTVRLMRFNFDWMSGYSWGKLTEADWLRRIIFLETVAGVPGSVAAILRHLHSLRRLK-RDHGWIHTLLEEAENERMHLLTGLKLKQPGKIFRTAVWVTQGIFFNFFFAAYLVSPRFCHRFVGYLEEEAVRTYTHLLHDLDAGKLPEWKDTPAPEIARQYWKMGDDAKWRDVVALIRADEAHHREVNHTFANLQLE 365
BLAST of mRNA_H-canaliculatus_F_contig1201.1767.1 vs. uniprot
Match: A0A7S4PID3_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PID3_GUITH) HSP 1 Score: 280 bits (716), Expect = 7.410e-81 Identity = 141/262 (53.82%), Postives = 179/262 (68.32%), Query Frame = 2
Query: 254 VHFRATPTKHPLGMGSPQSSSSSATRISTPGMKGKEWSMPNQ--IWSEEEVNNIKPTHKEPEEAVDHITLNGVRVLRWSFDVLAGFKTGVIDEHKYLNRVIFLETVAGIPGMVAGALRHLTSLRRMRSRDHGWIHTLLEEAENERMHLLTFLKLKQPGPIFRFAVMISQGVMYNAFFLSYIISPKACHRFVGYIEEEAVHTYTALLEDIDANKLPLFSNLPAPAMAKSYWKLGENAMFRDLVLAVRADEANHCVVNHTFADM 1033
VHF+ +P +H LG+ + G++ W P Q +W+EEEV +K TH +P + D + L+ V+ RW+FD L+G+K G I E K +NR IFLETVAG+PGMV G LRHL SLR M +RDHGWIHTLLEEAENERMHLLTF+ +K+PGPIFR AV+ +QG+ N FFL+Y++ PK CHRFVGY+EEEAV TYT +L ID +L F N AP +A YW + +A RDL L +RADEANH VNH FA +
Sbjct: 43 VHFKTSPNRHSLGVQKVKK-----------GVEDDVWDNPFQHSVWTEEEVYGVKKTHVDPHDRADSLALSAVQAARWTFDTLSGYKIGNITESKVINRAIFLETVAGVPGMVGGMLRHLRSLRTM-NRDHGWIHTLLEEAENERMHLLTFVTIKKPGPIFRLAVIGTQGIFMNLFFLTYMVYPKICHRFVGYLEEEAVKTYTDILNAIDDGRLASFRNARAPQIAIDYWHMKPDATMRDLFLVIRADEANHRDVNHMFASL 292 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1201.1767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1201.1767.1 >prot_H-canaliculatus_F_contig1201.1767.1 ID=prot_H-canaliculatus_F_contig1201.1767.1|Name=mRNA_H-canaliculatus_F_contig1201.1767.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=404bp MIRAVAGTRLLATAACSSPRVAAGLISSEVTALRLSGTALTTTRRSLGTSback to top mRNA from alignment at H-canaliculatus_F_contig1201:4633..11050+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1201.1767.1 ID=mRNA_H-canaliculatus_F_contig1201.1767.1|Name=mRNA_H-canaliculatus_F_contig1201.1767.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6418bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1201:4633..11050+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1201:4633..11050+ >mRNA_H-canaliculatus_F_contig1201.1767.1 ID=mRNA_H-canaliculatus_F_contig1201.1767.1|Name=mRNA_H-canaliculatus_F_contig1201.1767.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2424bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1201:4633..11050+ (Hapterophycus canaliculatus Oshoro5f female)back to top |