mRNA_H-canaliculatus_F_contig12008.1765.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12008.1765.1 vs. uniprot
Match: D7FKW2_ECTSI (Sld5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW2_ECTSI) HSP 1 Score: 199 bits (505), Expect = 7.910e-63 Identity = 103/124 (83.06%), Postives = 105/124 (84.68%), Query Frame = 1
Query: 1 ITQLRWETGPVVPQELQQSLSAREMEFFNTYDRILTRFTRVSYVVLLSPQGWLISCGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGCVKLDRGTTHLLRRSDVEHLVRQGLLQELENEST 372
ITQLRWETGPVVPQELQQSLSAREME FNTYDRILT FT+ GLNLDLTADLQPPKELHVEVRVL+DCGEIMTDHG VKLDRGTTHLLRRSDVEHLVRQGLLQELENEST
Sbjct: 87 ITQLRWETGPVVPQELQQSLSAREMELFNTYDRILTNFTQ----------------GLNLDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELENEST 194
BLAST of mRNA_H-canaliculatus_F_contig12008.1765.1 vs. uniprot
Match: A0A7S2XZV1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZV1_9STRA) HSP 1 Score: 123 bits (308), Expect = 6.060e-33 Identity = 57/119 (47.90%), Postives = 81/119 (68.07%), Query Frame = 1
Query: 10 LRWETGPVVPQELQQSLSAREMEFFNTYDRILTRFTRVSYVVLLSPQGWLISCGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGCVKLDRGTTHLLRRSDVEHLVRQGLLQELENE 366
LRWETGPVVP+ LQ +LS E EFF+ YD +++ + G+ +DLT D QPPKEL +EVR L DCGEIMT+ G + L++G+THLLRR D E+L++QG+L+++ ++
Sbjct: 92 LRWETGPVVPEHLQGALSGSEREFFSRYDSLVSGYCE----------------GVGIDLTQDQQPPKELFIEVRALEDCGEIMTEQGTINLEKGSTHLLRRCDAENLIKQGMLEQISDD 194
BLAST of mRNA_H-canaliculatus_F_contig12008.1765.1 vs. uniprot
Match: A0A7S2RC62_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RC62_9STRA) HSP 1 Score: 120 bits (302), Expect = 6.360e-32 Identity = 56/116 (48.28%), Postives = 80/116 (68.97%), Query Frame = 1
Query: 10 LRWETGPVVPQELQQSLSAREMEFFNTYDRILTRFTRVSYVVLLSPQGWLISCGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGCVKLDRGTTHLLRRSDVEHLVRQGLLQEL 357
LRWE G V+P ++++ +SA E FF++YD IL R+ R +++DLT+D+QPPK L +EVRVL DCGE++TD G + L + TTH LRRSDVEHL+RQG+L+++
Sbjct: 104 LRWEIGSVIPTDMKRKVSAEEGRFFDSYDDILQRYMRT----------------VDVDLTSDMQPPKNLFIEVRVLEDCGEVLTDSGSINLAKNTTHYLRRSDVEHLIRQGMLKQI 203
BLAST of mRNA_H-canaliculatus_F_contig12008.1765.1 vs. uniprot
Match: M4B5A2_HYAAE (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=M4B5A2_HYAAE) HSP 1 Score: 115 bits (289), Expect = 3.810e-31 Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 1 ITQLRWETGPVVPQELQQSLSAREMEFFNTYDRILTRFTRVSYVVLLSPQGWLISCGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGCVKLDRGTTHLLRRSDVEHLVRQGLLQEL 357
I LRWETG ++P L +L RE++FFN YD+++T + LDL+ADL+PPK+L+VEVRVL DCGE+MT+ G V LD + H LRR DVE L+RQGLL+++
Sbjct: 4 IQALRWETGTIIPGPLAPNLCQREVQFFNQYDQLVTNYMT----------------DFELDLSADLKPPKDLYVEVRVLRDCGEVMTESGLVNLDAHSHHFLRRVDVEQLIRQGLLEQI 106
BLAST of mRNA_H-canaliculatus_F_contig12008.1765.1 vs. uniprot
Match: W2KQ83_PHYPR (Sld5 domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2KQ83_PHYPR) HSP 1 Score: 118 bits (295), Expect = 5.110e-31 Identity = 57/119 (47.90%), Postives = 79/119 (66.39%), Query Frame = 1
Query: 1 ITQLRWETGPVVPQELQQSLSAREMEFFNTYDRILTRFTRVSYVVLLSPQGWLISCGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGCVKLDRGTTHLLRRSDVEHLVRQGLLQEL 357
I LRWETG ++P +L Q+L RE++FFN YD++LT + LDL+AD++PPK+L+VEVRVL DCGE+MT+ G V L+ + H LRR DVE L+RQGLL+++
Sbjct: 88 IKALRWETGTIIPAQLAQNLCQREVQFFNQYDQLLTDYM----------------AEFELDLSADMKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 190
BLAST of mRNA_H-canaliculatus_F_contig12008.1765.1 vs. uniprot
Match: A0A3R7MJX0_9STRA (Sld5 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A3R7MJX0_9STRA) HSP 1 Score: 117 bits (294), Expect = 7.430e-31 Identity = 58/119 (48.74%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 1 ITQLRWETGPVVPQELQQSLSAREMEFFNTYDRILTRFTRVSYVVLLSPQGWLISCGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGCVKLDRGTTHLLRRSDVEHLVRQGLLQEL 357
I LRWETG ++P L Q+L REM+ FN YD++LT + LDL+ADL+PPK+L+VEVRVL DCGE+MT+ G V L+ + H LRR DVE L+RQGLL+++
Sbjct: 89 IKALRWETGTIIPAPLAQNLCQREMQLFNAYDQLLTDYM----------------ADFELDLSADLKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 191
BLAST of mRNA_H-canaliculatus_F_contig12008.1765.1 vs. uniprot
Match: A0A7S2CTQ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTQ8_9STRA) HSP 1 Score: 116 bits (291), Expect = 8.530e-31 Identity = 57/117 (48.72%), Postives = 78/117 (66.67%), Query Frame = 1
Query: 7 QLRWETGPVVPQELQQSLSAREMEFFNTYDRILTRFTRVSYVVLLSPQGWLISCGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGCVKLDRGTTHLLRRSDVEHLVRQGLLQEL 357
QLRW+ G V+P E + ++ A E FF+ YD++LT + + +D+T+D+ PPKEL VE+RVL +CGEIMT+ G V L++GTTHLLRRSDVE LVRQG L+E+
Sbjct: 54 QLRWDLGTVLPPEYRSNMHAHETSFFSKYDKLLTNYIS----------------DVGVDVTSDMMPPKELMVEIRVLAECGEIMTETGSVNLEKGTTHLLRRSDVESLVRQGYLEEI 154
BLAST of mRNA_H-canaliculatus_F_contig12008.1765.1 vs. uniprot
Match: G4YZC9_PHYSP (Sld5 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZC9_PHYSP) HSP 1 Score: 117 bits (293), Expect = 9.700e-31 Identity = 58/119 (48.74%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 1 ITQLRWETGPVVPQELQQSLSAREMEFFNTYDRILTRFTRVSYVVLLSPQGWLISCGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGCVKLDRGTTHLLRRSDVEHLVRQGLLQEL 357
I LRWETG ++P L Q+L RE++FFN YD++LT + LDL+ADL+PPK+L+VEVRVL DCGE+MT+ G V L+ + H LRR DVE L+RQGLL+++
Sbjct: 86 IKALRWETGTIIPGPLAQNLCQREVQFFNQYDQMLTDYM----------------ADFELDLSADLKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 188
BLAST of mRNA_H-canaliculatus_F_contig12008.1765.1 vs. uniprot
Match: K3X6H6_GLOUD (Sld5 domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X6H6_GLOUD) HSP 1 Score: 117 bits (292), Expect = 1.450e-30 Identity = 56/121 (46.28%), Postives = 80/121 (66.12%), Query Frame = 1
Query: 1 ITQLRWETGPVVPQELQQSLSAREMEFFNTYDRILTRFTRVSYVVLLSPQGWLISCGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGCVKLDRGTTHLLRRSDVEHLVRQGLLQELEN 363
I LRWETG ++P L +L RE++FF +YD++LT + +DL+AD +PPK+L+VEVRVL DCGEIMT++G V L+ +TH LRR DVE L+RQGLL+++++
Sbjct: 88 IKNLRWETGTIIPASLAPNLCQREVQFFQSYDQLLTDYM----------------ADFEIDLSADTKPPKDLYVEVRVLRDCGEIMTENGLVNLEANSTHFLRRVDVEQLIRQGLLEQIKH 192
BLAST of mRNA_H-canaliculatus_F_contig12008.1765.1 vs. uniprot
Match: A0A225VV97_9STRA (DNA replication complex GINS protein PSF1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VV97_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.050e-30 Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 1 ITQLRWETGPVVPQELQQSLSAREMEFFNTYDRILTRFTRVSYVVLLSPQGWLISCGLNLDLTADLQPPKELHVEVRVLNDCGEIMTDHGCVKLDRGTTHLLRRSDVEHLVRQGLLQEL 357
I LRWETG ++P L Q+L E++FFN YD++LT + LDLTAD++PPK+L+VEVRVL DCGE+MT+ G V L+ + H LRR DVE L+RQGLL+++
Sbjct: 88 IKALRWETGTIIPASLAQNLCQGEVQFFNQYDQLLTDYM----------------ADFELDLTADIKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 190 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12008.1765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12008.1765.1 >prot_H-canaliculatus_F_contig12008.1765.1 ID=prot_H-canaliculatus_F_contig12008.1765.1|Name=mRNA_H-canaliculatus_F_contig12008.1765.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=125bp ITQLRWETGPVVPQELQQSLSAREMEFFNTYDRILTRFTRVSYVVLLSPQback to top mRNA from alignment at H-canaliculatus_F_contig12008:1111..2014+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12008.1765.1 ID=mRNA_H-canaliculatus_F_contig12008.1765.1|Name=mRNA_H-canaliculatus_F_contig12008.1765.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=904bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12008:1111..2014+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12008:1111..2014+ >mRNA_H-canaliculatus_F_contig12008.1765.1 ID=mRNA_H-canaliculatus_F_contig12008.1765.1|Name=mRNA_H-canaliculatus_F_contig12008.1765.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=750bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12008:1111..2014+ (Hapterophycus canaliculatus Oshoro5f female)back to top |