mRNA_H-canaliculatus_F_contig120.1751.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig120.1751.1 vs. uniprot
Match: A0A6H5JTJ2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTJ2_9PHAE) HSP 1 Score: 153 bits (386), Expect = 4.670e-40 Identity = 78/169 (46.15%), Postives = 91/169 (53.85%), Query Frame = 1
Query: 370 EYASMLLPVRVVSMQYPYGRYMGQATPDVRLMCDIPHGRGSFFYNDGSVYDGSWNRGNWEGQAIRTWPLGARYVGGFKDNQQHG------------------------------------------------KGTLVLPNGGGGYSXXXXXXXXXXXXXXXXXDGQTCE 732
++ + ++P+RVV+MQYPYG YMGQA PD RL DIPHGRGSFFYNDG+VY+G W GNWEGQA+RTWPLGARY G FK+N QHG +GTL+LPNGGGGYS DGQTCE
Sbjct: 137 DFPTFMMPLRVVTMQYPYGMYMGQAIPDARLGSDIPHGRGSFFYNDGAVYEGDWKHGNWEGQAVRTWPLGARYEGEFKNNLQHGQVGEAEGRKGGKRCAPDKMFSLQLAGVALTGAALFVVLSCAWGFRAEPRGTLMLPNGGGGYSGEWEHGYQHGKGILTTPDGQTCE 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig120.1751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig120.1751.1 >prot_H-canaliculatus_F_contig120.1751.1 ID=prot_H-canaliculatus_F_contig120.1751.1|Name=mRNA_H-canaliculatus_F_contig120.1751.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=299bp MARLTRLVRSVSGRNIVAATIIEDPEAMKASETIAAKSSKKPEPLEEIKEback to top mRNA from alignment at H-canaliculatus_F_contig120:822..8199- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig120.1751.1 ID=mRNA_H-canaliculatus_F_contig120.1751.1|Name=mRNA_H-canaliculatus_F_contig120.1751.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7378bp|location=Sequence derived from alignment at H-canaliculatus_F_contig120:822..8199- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig120:822..8199- >mRNA_H-canaliculatus_F_contig120.1751.1 ID=mRNA_H-canaliculatus_F_contig120.1751.1|Name=mRNA_H-canaliculatus_F_contig120.1751.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1794bp|location=Sequence derived from alignment at H-canaliculatus_F_contig120:822..8199- (Hapterophycus canaliculatus Oshoro5f female)back to top |