mRNA_H-canaliculatus_F_contig11984.1735.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11984.1735.1 vs. uniprot
Match: D7FWC7_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC7_ECTSI) HSP 1 Score: 458 bits (1178), Expect = 2.800e-149 Identity = 242/370 (65.41%), Postives = 276/370 (74.59%), Query Frame = 1
Query: 1 LLQAEAEMEQMKAARTGGARFVPGIGVVINPFLVLQVNRTHLLHETLAQ--------------------------------------------------------------------VSQIPDSALRKKLKVVFRGEEGVDEGGVAKEFFQLLTVQLFDQSFGMFIPAGKEGRSLWFNKDCIWADEEYGLVGLLVGLAVYAGVILDVPLPPVVFKKLLGEQLTLKDLEDIDPDLLQGFQRLREYDGGDDEDIFGLDFRVTWDDLGMERSHDLLEGGADIPVTAENKEEYVELYAQFLLMSAVSRQFEHFKQGFLRVMSGASSISLLRAEELEVLVTGTPELDFKQLAATTEYEGGYGKDHPTMLAFWAAV 906
LL+AEA++EQ KAA+ G +VP +GVVINP+LVL VNRTHLL ETLAQ VS++PD+ LRK+LKVVFRGE+GVDEGGV KEFFQLLTVQLFDQSFGMF+PAG+ GR LWFNKDC+WADEEYGLVGLLVGLAVY+GVILDVPLP VVFKK+LGEQL+L+DL DIDP LL+GF +LR+YDGGDDED+FGLDFRVTWDDLGMERSHDL+EGGA+IPVT+ENKE YVELYAQFLL+ AVSRQ +HFKQGFLRVMSGA+SISL RAEELEVLVTGT ELDF++LA TEY+GGY +DH T+LAFW AV
Sbjct: 760 LLKAEAQVEQDKAAQASG-HYVPLVGVVINPYLVLTVNRTHLLQETLAQGTHSTQRTINSATAPAVHFYATLLAYAPSSPSSLYCIFPTLWLGGFALDPKPPPCCAAFPPHVPRPAKVSRLPDADLRKRLKVVFRGEDGVDEGGVTKEFFQLLTVQLFDQSFGMFVPAGEGGRVLWFNKDCVWADEEYGLVGLLVGLAVYSGVILDVPLPLVVFKKVLGEQLSLEDLGDIDPGLLKGFHQLRDYDGGDDEDVFGLDFRVTWDDLGMERSHDLVEGGANIPVTSENKESYVELYAQFLLVGAVSRQMDHFKQGFLRVMSGAASISLFRAEELEVLVTGTSELDFEELAKATEYDGGYDEDHRTILAFWRAV 1128
BLAST of mRNA_H-canaliculatus_F_contig11984.1735.1 vs. uniprot
Match: A0A6H5K2Y9_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y9_9PHAE) HSP 1 Score: 384 bits (986), Expect = 8.790e-119 Identity = 219/372 (58.87%), Postives = 246/372 (66.13%), Query Frame = 1
Query: 1 LLQAEAEMEQMKAARTGGARFVPGIGVVINPFLVLQVNRTHLLHETLAQ-------------------------------------------VSQIPDSALRKKLKVVFRGEEGVDEGGVAKEFFQLLTVQLFDQSFGMFIPAGKEGRSLWFNKDCIWADEEYGLVGLLVGLAVYAGVILDVPLPPVVFKKLLGEQLTLKDLEDIDPDLLQGFQRLREYDGGDDEDIFGLDFRVTWDDLGMERSHDLLEGGADIPVTAENKEEYVELYAQFLLMSAVSRQFEHFKQGFLRVMSGASSISLL---------------------------RAEELEVLVTGTPELDFKQLAATTEYEGGYGKDHPTMLAFWAAV 906
LL+AEA++EQ KAA+ G +VP +GVVI PFLVL VNRTHLL ETLAQ VS++PD+ LRKKLKVVFRGE+GVDEGGVAKEFFQLLTVQLFDQSFGMF+PAG+ GR LWFNKDC+WADEEYGLVGLLVGLAVY+GVILDVPLP VVFKKLLGEQL+L+ VTWDDLGMERSHDL+EGGA+IPVT+ENKE YVELYAQFLL+ AVSRQ +HFKQGFLRVMSGA+SISL RAEELEVLVTGT ELDF++LA TEY+GGYG+DH T+ AFW AV
Sbjct: 1296 LLKAEAKVEQDKAAQASG-HYVPLVGVVIRPFLVLTVNRTHLLQETLAQASKQAENVFGLSTPFRVPETLVYSLGEPIFADAVRPTNVNLSCVSRLPDADLRKKLKVVFRGEDGVDEGGVAKEFFQLLTVQLFDQSFGMFVPAGEGGRVLWFNKDCVWADEEYGLVGLLVGLAVYSGVILDVPLPLVVFKKLLGEQLSLE---------------------------------VTWDDLGMERSHDLVEGGANIPVTSENKESYVELYAQFLLVGAVSRQMDHFKQGFLRVMSGAASISLFSLLSCVSQPPPRSCFFSQSLVCFMPSFRAEELEVLVTGTSELDFEELAKATEYDGGYGEDHRTIRAFWRAV 1633
BLAST of mRNA_H-canaliculatus_F_contig11984.1735.1 vs. uniprot
Match: A0A7S2R9E4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9E4_9STRA) HSP 1 Score: 287 bits (734), Expect = 1.600e-86 Identity = 158/307 (51.47%), Postives = 209/307 (68.08%), Query Frame = 1
Query: 1 LLQAEAEMEQMKAARTGGARFVPGIGVVINP---FLVLQVNRTHLLHETLAQVSQIPDSALRKKLKVVFRGEEGVDEGGVAKEFFQLLTVQLFDQSFGMFIPAGKEGRSLWFNKDCIWADEEYGLVGLLVGLAVYAGVILDVPLPPVVFKKLLGEQL-TLKDLEDIDPDLLQGFQRLREYD-GGDDEDIFGLDFRVTWDDLGMERSHDLLEGGADIPVTAENKEEYVELYAQFLLMSAVSRQFEHFKQGFLRVMSGASSISLLRAEELEVLVTGTPELDFKQLAATTEYEGGYGKDHPTMLAFWAAV 906
LL+ EA+++Q A A+ V V+NP FLVL VNR HLL TL Q+ +PD+ LRK+LKV F GE+G+DEGGV KEFFQLL +LF + +GMF + G SLWFN+ C W+D EY LVG+L+GLA+Y GVILDV P VV+KKLL +Q TL+D+ +DP+L +G ++L E++ G ED F F VTW G + +L GG++I +T EN++EYVELY ++LL +V +QF FKQGF RVM G++++ LLR E+LE +V+GTP LDFK+L T YEGGY HP M FW V
Sbjct: 548 LLRVEAQLQQNYAGMQAVAQSVTS--QVLNPAARFLVLHVNREHLLQHTLTQLVSVPDTELRKELKVAFEGEDGIDEGGVRKEFFQLLIERLFSEQYGMFT---RVGGSLWFNQGCTWSDGEYSLVGMLIGLALYNGVILDVHFPLVVYKKLLPDQRWTLRDVAFLDPELARGLRQLLEFEPAGLVEDTFCRSFEVTWTSFGADHVTELKPGGSEILITGENRKEYVELYVRWLLEQSVEQQFGAFKQGFDRVM-GSATLGLLRPEDLEAIVSGTPHLDFKELRRVTVYEGGYHDHHPVMEWFWDVV 848
BLAST of mRNA_H-canaliculatus_F_contig11984.1735.1 vs. uniprot
Match: A0A7S4QMC4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QMC4_9STRA) HSP 1 Score: 260 bits (665), Expect = 7.000e-81 Identity = 140/298 (46.98%), Postives = 197/298 (66.11%), Query Frame = 1
Query: 19 EMEQMKAARTGGARF-VPGIGVVINPFLVLQVNRTHLLHETLAQVSQIPDSALRKKLKVVFRGEEGVDEGGVAKEFFQLLTVQLFDQSFGMFIP-AGKEGRSLWFNKDCIWADEEYGLVGLLVGLAVYAGVILDVPLPPVVFKKLLGEQLTLKDLEDIDPDLLQGFQRLREYDGGDDEDIFGLDFRVTWDDLGMERSHDLLEGGADIPVTAENKEEYVELYAQFLLMSAVSRQFEHFKQGFLRVMSGASSISLLRAEELEVLVTGTPELDFKQLAATTEYEGGYGKDHPTMLAFWAAV 906
++E ++AA G + PF VL ++R H+L +TL ++ LRK+LKVVF+GE+GVD GGV KEFFQLL VQLFD + GM+ G + + WFN DC W ++ Y LVG+LVGLA+Y GV+LDV P V++KL+ L L+D+ +D ++ G Q+L +YDG D EDIF L F V W ++G +R +L GGADIPVT++N+EEYV LY ++LL+ +V Q++ F++GF+RVM +SS+ LL ELE+LV GTP+LDF L + T YEG Y ++ + FW V
Sbjct: 68 QVEMIRAATATGVHYDAEQRTYSFQPFFVLAIDREHMLRQTLQKIESASPEDLRKQLKVVFKGEDGVDAGGVTKEFFQLLAVQLFDINTGMWSTRVGGDEQVTWFNSDCSWNEDGYYLVGILVGLALYNGVLLDVHFPSAVYRKLMALPLALEDM--VDKEVRSGLQQLLDYDGDDVEDIFCLTFEVMWMEMGNQRKLELKPGGADIPVTSDNREEYVMLYVRWLLVESVRAQYDAFERGFMRVMD-SSSLDLLTPGELELLVVGTPDLDFSALMSNTTYEG-YTEESEVVQNFWRFV 361
BLAST of mRNA_H-canaliculatus_F_contig11984.1735.1 vs. uniprot
Match: A0A1Z5JAZ9_FISSO (Ubiquitin-protein ligase E3 A n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAZ9_FISSO) HSP 1 Score: 271 bits (692), Expect = 4.300e-79 Identity = 145/299 (48.49%), Postives = 199/299 (66.56%), Query Frame = 1
Query: 1 LLQAEAEMEQMKAARTGGARFVPGIGVVINPFLVLQVNRTHLLHETLAQVSQIPDSALRKKLKVVFRGEEGVDEGGVAKEFFQLLTVQLFDQSFGMFIPAGKEGRSLWFNKDCIWADEEYGLVGLLVGLAVYAGVILDVPLPPVVFKKLLGEQLTLKDLEDIDPDLLQGFQRLREYDGGDDEDIFGLDFRVTWDDLGMERSHDLLEGGADIPVTAENKEEYVELYAQFLLMSAVSRQFEHFKQGFLRVMSGASSISLLRAEELEVLVTGTPELDFKQLAATTEYEGGYGKDHPTMLAFW 897
LL E+++ MK A G + G+ I+PF VL+V R +LL +TLA++ + LR KL+V F+GE+GVD GGV +EFF LL+ +LFD + M+ + + WFN DC W ++ Y LVG+L GL +Y GV+LDV P V++KLL L L+DL +DP++ +G Q+L +YDG D EDIF L F V+W DLG E+ +L GGADIPVT+ NKEEYV LY ++LL+ ++ Q+E FK+G LR+M +SS+ L R EELE+LV GTPELDF+ L EYEGGY K+ + W
Sbjct: 916 LLLIESQVNMMKTATESGRVEIRPDGLAIDPFYVLEVERENLLEQTLAKIKEADPKELRMKLRVKFKGEDGVDAGGVTREFFHLLSDELFDVNSSMWTRRFGDNIT-WFNSDCTWDEQGYELVGILFGLGLYNGVLLDVHFPQAVYRKLLDLPLGLEDL--VDPEIRKGMQQLLDYDGDDVEDIFCLSFEVSWMDLGEEKKVELKPGGADIPVTSFNKEEYVLLYVKWLLVDSIQPQWEAFKKGVLRIME-SSSLDLFRPEELELLVVGTPELDFEALEKNAEYEGGYTKESDAVQNLW 1210
BLAST of mRNA_H-canaliculatus_F_contig11984.1735.1 vs. uniprot
Match: A0A7S2XN65_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XN65_9STRA) HSP 1 Score: 270 bits (690), Expect = 6.840e-79 Identity = 139/302 (46.03%), Postives = 200/302 (66.23%), Query Frame = 1
Query: 1 LLQAEAEMEQMKAARTGGARFVPGIGVVINPFLVLQVNRTHLLHETLAQVSQIPDSALRKKLKVVFRGEEGVDEGGVAKEFFQLLTVQLFDQSFGMFIPAGKEGRSLWFNKDCIWADEEYGLVGLLVGLAVYAGVILDVPLPPVVFKKLLGEQLTLKDLEDIDPDLLQGFQRLREYDGGDDEDIFGLDFRVTWDDLGMERSHDLLEGGADIPVTAENKEEYVELYAQFLLMSAVSRQFEHFKQGFLRVMSGASSISLLRAEELEVLVTGTPELDFKQLAATTEYEGGYGKDHPTMLAFWAAV 906
LL+ E ++E K A + + I+PF L++ R HL+ TLA++ + LRKKL+V+F+ EEGVD GGV +EFFQLL+ LFD S ++ + + WFN DC W ++ Y LVG+LVGLA+Y V+LDV P V++KLLG L L+D+ +D +L +G L +Y+G D ED+F L F VTW DLG E++ +L GG+DIPVT++N+EEYV LY +++L+ ++ Q++ F++G +RVM + ++ L R EEL++LV G+PELDFK L A TEYEGGY KD + FW V
Sbjct: 937 LLETENQVEMYKLATSDAKYDAETREIKIDPFFPLEIERDHLMEHTLAKIKATKGTELRKKLRVIFKDEEGVDAGGVTREFFQLLSQDLFDVSSSLWTTQYGD-QITWFNSDCTWDNDGYELVGILVGLALYNSVLLDVHFPMAVYRKLLGLPLGLEDM--VDEELKKGLHHLLDYEGDDVEDVFCLTFEVTWMDLGKEQNVELKPGGSDIPVTSDNREEYVLLYVEWVLIDSIKEQWDAFEKGLMRVMEDSITMDLFRPEELKLLVVGSPELDFKALEANTEYEGGYDKDSAVVRNFWRFV 1235
BLAST of mRNA_H-canaliculatus_F_contig11984.1735.1 vs. uniprot
Match: W7TN24_9STRA (Ubiquitin protein ligase e3a n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN24_9STRA) HSP 1 Score: 265 bits (676), Expect = 9.360e-77 Identity = 154/315 (48.89%), Postives = 205/315 (65.08%), Query Frame = 1
Query: 1 LLQAEAEMEQMKAARTGGARFVPGIGVVINPFLVLQVNRTHLLHETLAQVSQIPDSALRKKLKVVFRGEEGVDEGGVAKEFFQLLTVQLFDQSFGMFIPAGKEGRSLWFNKD--CIWADEEYGLVGLLVGLAVYAGVILDVPLPPVVFKKLLGEQLTLKDLEDIDPDLLQGFQRLREYDG-----GDD------EDIFGLDFRVTWDDLGMERSHDLLEGGADIPVTAENKEEYVELYAQFLLMSAVSRQFEHFKQGFLRVMSGASSISLLRAEELEVLVTGTPELDFKQLAATTEYEGGYGKDHPTMLAFWAAV 906
LL EA +EQ +AA+ R + G V+ P+LVL+V+R HLL+ TLAQV Q L+K+LKV F EEGVDEGGV KEFFQLLT QLFD S+GMF + R WFN +EY LVG+LVGLA+Y V+LD+ P VV+KKLLG + L DL +I+P+L++G +L +Y+ G++ ED+F L+F V W + + H+L GG DI VTA N+ EYV+LY Q++L ++++ FE FK G+ VM G SSISLLR EEL +LV GTP L+ +L A +YEGGY +HP + AFW+ V
Sbjct: 1042 LLYGEAVLEQQQAAQKDMMRQMFQGGPVM-PYLVLRVDRNHLLNSTLAQVGQCDSMTLKKQLKVSFLDEEGVDEGGVKKEFFQLLTAQLFDFSYGMF-KMTESKRDWWFNSSGTSFGDPQEYQLVGILVGLALYNSVLLDLHFPLVVYKKLLGRPVGLSDLGEIEPELMEGLLKLLDYEEDAKNTGEEGAMAKVEDVFCLNFEVDWVEFDEVKRHELKPGGKDIEVTAANRHEYVDLYVQWVLAESIAKPFEAFKAGYDHVMGG-SSISLLRPEELMLLVCGTPHLNLHELEAVAKYEGGYEAEHPVIKAFWSVV 1353
BLAST of mRNA_H-canaliculatus_F_contig11984.1735.1 vs. uniprot
Match: A0A7S2YF11_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YF11_9STRA) HSP 1 Score: 256 bits (653), Expect = 1.220e-74 Identity = 142/302 (47.02%), Postives = 194/302 (64.24%), Query Frame = 1
Query: 1 LLQAEAEMEQMKAARTGGARFVPGIGVVINPFLVLQVNRTHLLHETLAQVSQIPDSALRKKLKVVFRGEEGVDEGGVAKEFFQLLTVQLFDQSFGMFIPAGKEGRSLWFNKDCIWADEEYGLVGLLVGLAVYAGVILDVPLPPVVFKKLLGEQLTLKDLEDIDPDLLQGFQRLREYDGGDDEDIFGLDFRVTWDDLGMERSHDLLEGGADIPVTAENKEEYVELYAQFLLMSAVSRQFEHFKQGFLRVMSGASSISLLRAEELEVLVTGTPELDFKQLAATTEYEGGYGKDHPTMLAFWAAV 906
LL E ++E ++AA + V +PF VL ++R HLL +TL ++S LRK LK+VF+GE+GVD GGV +EF LL+ QLFD S GM+ E + WFN DC W DE Y LVG+L GLAVY VILDV P V++KLLG L L+D+ +D + G Q+L Y+G D EDIF L F TW DLG+ER +L GGADIPVT++N+EEYV LY ++LL+ ++ Q+E F++G ++V+ +SS+ LL+ EELE+L+ G+P+LD T YEG + D P + FW V
Sbjct: 598 LLMIENQVEMLRAATSNLTWDREQHQFVFDPFFVLAIDRKHLLTQTLQKISGASHVELRKSLKIVFKGEDGVDAGGVLREFMYLLSHQLFDASTGMWSSHFDESGTTWFNGDCTWNDEGYYLVGVLTGLAVYNDVILDVHFPRAVYRKLLGYTLGLEDM--VDEETRNGLQQLLNYEGDDVEDIFCLSFEHTWMDLGIERKVELKPGGADIPVTSQNREEYVMLYVKWLLVDSIHAQYEAFERGVMQVLE-SSSLDLLQPEELELLLVGSPDLDIDAWEQNTTYEG-FEADSPVIRNFWRFV 895
BLAST of mRNA_H-canaliculatus_F_contig11984.1735.1 vs. uniprot
Match: A0A7S1U6E2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6E2_9STRA) HSP 1 Score: 257 bits (656), Expect = 2.880e-74 Identity = 143/301 (47.51%), Postives = 193/301 (64.12%), Query Frame = 1
Query: 13 EAEMEQMKAARTGGARFVPGIGVVINPFLVLQVNRTHLLHETLAQVSQIPDSALRKKLKVVFRGEEGVDEGGVAKEFFQLLTVQLFDQSFGMFIPAGKEGRSLWFNKDCIWADE--EYGLVGLLVGLAVYAGVILDVPLPPVVFKKLLGEQLTLKDLEDIDPDLLQGFQRLREYDGGDD-EDIFGLDFRVTWDDLGMERSHDLLEGGADIPVTAENKEEYVELYAQFLLMSAVSRQFEHFKQGFLRVMSGASSISLLRAEELEVLVTGTPELDFKQLAATTEYEGGYGKDHPTMLAFWAAV 906
+A ++Q A A+FV G PFLVL V+R +L++ L Q+ PD LRK+LKV F GEEGVD+GGV KEFFQL+T QLF +GMF + R +WFN DC W + + +VG L+ LAVY GVILD+ P V++KKLLG+ L L DLE +DPDL GF++L E+ D ED+F L F V+++ +G ERS +L GG DI VT E + EYVE Y F+L+ ++ QFE F++GFL+VM + + L +ELE L+ G P+LDF+ L EYEG Y K+ P + FW+ V
Sbjct: 850 QARLQQQAAMSHMMAQFVGGAPPADLPFLVLTVDRQNLVYSALTQLGGAPDGDLRKELKVRFAGEEGVDQGGVRKEFFQLITEQLFGAEYGMFSRRLGD-RIVWFNPDCTWEEAAGNFRIVGKLLALAVYNGVILDLNFPSVLYKKLLGQPLGLDDLESLDPDLRSGFRKLLEFAPADQVEDVFCLTFEVSYESMGEERSAELKPGGKDIAVTGELRGEYVEKYTNFILVESIKPQFEPFREGFLKVMGDSRVLQRLTPKELEYLIVGEPKLDFQALEENAEYEG-YTKNCPFIRQFWSIV 1148
BLAST of mRNA_H-canaliculatus_F_contig11984.1735.1 vs. uniprot
Match: A0A7S3P553_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P553_9STRA) HSP 1 Score: 255 bits (652), Expect = 1.660e-73 Identity = 138/299 (46.15%), Postives = 194/299 (64.88%), Query Frame = 1
Query: 1 LLQAEAEMEQMKAARTGGARFVPGIGVVINPFLVLQVNRTHLLHETLAQVSQIPDSALRKKLKVVFRGEEGVDEGGVAKEFFQLLTVQLFDQSFGMFIPAGKEGRSLWFNKDCIWADEEYGLVGLLVGLAVYAGVILDVPLPPVVFKKLLGEQLTLKDLEDIDPDLLQGFQRLREYDGGDDEDIFGLDFRVTWDDLGMERSHDLLEGGADIPVTAENKEEYVELYAQFLLMSAVSRQFEHFKQGFLRVMSGASSISLLRAEELEVLVTGTPELDFKQLAATTEYEGGYGKDHPTMLAFW 897
LLQ E +++ ++AA + + +P+ V+ ++R +LL +TL ++ + LRK LKVVF+GE+GVD GGV KEFFQLL+ +LFD S GM+ + R WFN DC W + Y LVG+LVGLA+Y V+LDV P V++KLLG L L+D+ +D +L G Q L +YDG D ED+F L+F VTW LG E+ +L GA+IPVT+ NKEEYV LY ++LL+ ++ +Q+E F+ G + V+ G SS+ LLR +ELE LV GT LD++ L T YEGGY + + FW
Sbjct: 1082 LLQVEHQVDMLRAATSQVTWDPQRRQFLFDPYFVVAIDRQYLLQQTLQKIGNSTPTDLRKSLKVVFKGEDGVDAGGVTKEFFQLLSQELFDVSTGMWSTRYGD-RVTWFNGDCTWNFDGYYLVGILVGLALYNSVLLDVHFPAAVYRKLLGRSLGLEDM--VDEELKNGLQALLDYDGDDVEDVFCLNFEVTWTSLGSEKRMELKPNGANIPVTSSNKEEYVLLYVRWLLVDSIQKQWEAFENGVMHVLDG-SSLDLLRPDELERLVVGTAHLDYEALRQNTVYEGGYDAESAVVQNFW 1376 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11984.1735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11984.1735.1 >prot_H-canaliculatus_F_contig11984.1735.1 ID=prot_H-canaliculatus_F_contig11984.1735.1|Name=mRNA_H-canaliculatus_F_contig11984.1735.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=295bp MEQMKAARTGGARFVPGIGVVINPFLVLQVNRTHLLHETLAQVSQIPDSAback to top mRNA from alignment at H-canaliculatus_F_contig11984:7..3052- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11984.1735.1 ID=mRNA_H-canaliculatus_F_contig11984.1735.1|Name=mRNA_H-canaliculatus_F_contig11984.1735.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3046bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11984:7..3052- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11984:7..3052- >mRNA_H-canaliculatus_F_contig11984.1735.1 ID=mRNA_H-canaliculatus_F_contig11984.1735.1|Name=mRNA_H-canaliculatus_F_contig11984.1735.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1770bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11984:7..3052- (Hapterophycus canaliculatus Oshoro5f female)back to top |