mRNA_H-canaliculatus_F_contig1198.1729.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: D8LB66_ECTSI (Cyclin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB66_ECTSI) HSP 1 Score: 456 bits (1173), Expect = 3.970e-155 Identity = 273/402 (67.91%), Postives = 291/402 (72.39%), Query Frame = 1
Query: 211 MEIDVGSLRCMAPSLGIPSHRHYDPADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHML-TRAQEEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRALSAPPPAVACATIRMAARIHGGERRLRWFSPPLQPTKKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPPYSLNAG---SGL---VNGQHYARVPGVSPLAPXXXXXXXXXXHLTHGGVTGQRA--ADAADEAVAGARSVSGGDGQAEEXXXXXXXXDRVGADETITMPWWGLFDARDEEVELVCSELLALYRRHGDG 1389
MEIDVGSLRC+AP+LGIP +RHYDP+D EDAALRL+WAK+LFRAGYRLRFPQ TTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHML + Q+EPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRL RA TRTAWGLANDVLFCPRALSAPPPAVACA IRMAAR+HGG+RRLRW+SPP+Q K + XXXXXXXXXXXXXXX GL VNGQH XXXXXX H GG++G + A AD V G +S GG G E+ DET T PWW LFDARDEEVELVCSELLALYR HGDG
Sbjct: 1 MEIDVGSLRCVAPALGIPPNRHYDPSDAEDAALRLEWAKVLFRAGYRLRFPQGTTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSAPPPAVACAVIRMAARVHGGDRRLRWYSPPVQKISKRRREEEGDAIGGRDLGKVESGMGDRGRGGGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGLXXXVNGQHVVTXXXXXXXXXXXXXXXTVGDH---GGISGNQGGFAGGADVLVVGVKSSDGGRGGDEDQ-----------GDETATKPWWRLFDARDEEVELVCSELLALYRAHGDG 388
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A835YQW0_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQW0_9STRA) HSP 1 Score: 204 bits (519), Expect = 9.050e-59 Identity = 111/217 (51.15%), Postives = 138/217 (63.59%), Query Frame = 1
Query: 220 DVGSLRCMAPSLGIPSHRHYDPADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRD-VILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQE-----EPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRALSAPPPAVACATIRMAARIHGGERRLRWFS 852
++ +LR ++P+L + + ED R W +FRAG+RLR+PQETT TA++LFHRF E +R R V+L TCLFLAGKV E PRRLRDVIN LH+ T A+ EPP LD+AYW MKE++VE EQ +LR I F +D PYRLLLNYARSLRL R + AWG ND LF P AL PP +ACA I +AAR+ L W +
Sbjct: 9 NLAALRHLSPALSSGATSRSGGSQ-EDLRRRRGWTAAMFRAGHRLRYPQETTSTAIILFHRFCESEAQALRQRDRRLVVLVTCLFLAGKVRETPRRLRDVINCLHV-TAAEPGGGAVEPPRLDQAYWDMKEQVVECEQAVLRIIGFDMDGEHPYRLLLNYARSLRLSRELVQLAWGFVNDFLFIPSALELSPPTLACAAISLAARLTDELNDLNWIT 223
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: W7TSF1_9STRA (Cyclin-l1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSF1_9STRA) HSP 1 Score: 127 bits (320), Expect = 4.690e-29 Identity = 87/235 (37.02%), Postives = 116/235 (49.36%), Query Frame = 1
Query: 307 LRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSR--DVILTTCLFLAGKVTEAPRRLRDVINVLH-----MLTRAQ--------------EEPPL----------------------------------LDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRA-LSAPPPAVACATIRMAARI---HGGER 834
+R D ++L AG RLR PQET TA L+FHRF + ++ R+R DV+LTTCLFLA KV E PRR+RD IN ++ +L +AQ + L LD+ YW +KE +V+ EQ++LR + F ++ YRLLLNYARSLR AW L ND LF P L+ P A A A + +A R+ GG+R
Sbjct: 34 IRQDSVRVLLDAGRRLRLPQETIATAALIFHRFFAVRSLREYARNRRLDVVLTTCLFLASKVEEQPRRIRDAINCVYVVRKQLLAQAQGTRFVDTCAPSEGGDAETLSERGWVHGNGNGGAPGELKGNTDLARSVKGNILSLDRGYWDLKESVVDTEQLVLRILGFDLETFMSYRLLLNYARSLRARPVLVEVAWALLNDSLFSPACCLALPSHAQAVAALDLAQRLLTAAGGDR 268
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A1V9YAW3_9STRA (Cyclin-related protein FAM58A-like isoform 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAW3_9STRA) HSP 1 Score: 110 bits (274), Expect = 4.250e-24 Identity = 64/163 (39.26%), Postives = 91/163 (55.83%), Query Frame = 1
Query: 349 RLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQEEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRALSAPPPAVACATIRMAARI---HGG 828
RL T TA+LL HRF Q+ I +C+FLA K+TE PR+LRD++NV + + P + Y MKER+++ EQ +LR + F++D PY LLNYA+ LR RAT + A L +D + PR+LS P +A A + +A + HGG
Sbjct: 22 RLHLGYIPTTTAMLLSHRFYAQK--SPQTFPFMDIGASCIFLATKLTEKPRKLRDIMNVAYSIAHKTNSPVPVGSVYTAMKERLLDAEQNILRVLRFELDMDLPYMYLLNYAKFLRCSRATVQVALTLTSDFFYAPRSLSYDAPIIAAACLYVALSLVGEHGG 182
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A7S1CMQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMQ2_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.770e-23 Identity = 67/166 (40.36%), Postives = 82/166 (49.40%), Query Frame = 1
Query: 250 SLGIPSHRHYDPADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQEEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVL 747
+L + RH D ED LR G L PQ T AV HRF I KH V+ T CLFLA KV E PRRLRDV+N + + P LDKAYW +KE +V EQ++LR + F P R +LN +R+L L + A LAND L
Sbjct: 24 ALAAAAARHADVTPEEDRTLRRACWAFACDVGLGLDVPQNTVAAAVQFCHRFFIVNSFRKH--DPYVVSTACLFLACKVEETPRRLRDVLNCAWAVRYSDAPPLALDKAYWHLKEVMVSTEQLVLRALAFATRVEAPSRWILNLSRALDLDNGVVQVALALANDAL 187
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A0G4IYJ5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYJ5_PLABS) HSP 1 Score: 108 bits (270), Expect = 2.830e-23 Identity = 68/193 (35.23%), Postives = 97/193 (50.26%), Query Frame = 1
Query: 283 PADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQEEPPL-LDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRALSAPPPAVACATIRMAAR---IHGGERRLRWF 849
PAD E + +R ++ G RL+ PQ T TA +FHRF +E + H I TCLF+AGK E PRRLRDVIN ++ R + PPL + +W MKE ++E E+++LR I F VD P+ +++ R LR + ND P L P +AC + +A + G+ WF
Sbjct: 3 PAD-EGSVIRFQATTLIQDVGIRLQVPQMTIATAQTIFHRFFAKEPLADHDPMD--IAQTCLFVAGKSQETPRRLRDVINTVYRY-RNPDLPPLEVADPFWQMKEHLIESERLVLRVIAFDVDVVPPHAYAVHFLRDLRASNDLANCTLSILNDSCRIPLCLHYEPHVIACGAMYLATELLSVRPGDGDDEWF 191
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A7S0I6B2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6B2_9EUKA) HSP 1 Score: 110 bits (276), Expect = 1.410e-22 Identity = 65/184 (35.33%), Postives = 101/184 (54.89%), Query Frame = 1
Query: 280 DPADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQEEPPL----LDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRALSAPPPAVACATIRMAARI 819
+ A ++A R L AG +LR PQ + TA++ +HRF ++ + R R I TTCLFLAGKV E P++++DV+ + +AQ + P K +W +KE I+ E++LL+T++F + YR LL Y +S++ R + AW ND L AL PP VA + + +A+R
Sbjct: 72 EKAKEKEAQYRRLTVGFLQEAGQKLRLPQLSIATAIVFYHRFYSRKSYDSYDRFR--IATTCLFLAGKVEETPKKIKDVVIEAY---KAQHQKPTGPEPESKEFWALKEEILVCERILLQTLDFDLTVEHAYRPLLAYVKSIKGTRDLAQVAWNFINDSLRTTIALQYPPRCVAASAVHLASRF 250
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A2D4H7H0_MICLE (Uncharacterized protein (Fragment) n=3 Tax=Sauria TaxID=32561 RepID=A0A2D4H7H0_MICLE) HSP 1 Score: 105 bits (261), Expect = 3.310e-22 Identity = 65/192 (33.85%), Postives = 103/192 (53.65%), Query Frame = 1
Query: 262 PSHRHYDPADVE-DAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQ----EEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATT--RTAWGLANDVLFCPRALSAPPPAVACATIRMAAR 816
P+ D D++ + LR+ +++ AG LR PQ T +LFHRF + KH S +++ C+ LA K+ EAPRR+RDVINV H L + + P +LD+ Y K ++++ E+ +L+ + F V P+++++ Y + L R T +TAW ND L + P +ACA I +AAR
Sbjct: 36 PTPSMQDGLDLQSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKH--SFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRIKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDTLRTNVFVRFQPETIACACIYLAAR 225
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: W4GAN4_9STRA (Cyclin N-terminal domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAN4_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.130e-21 Identity = 65/191 (34.03%), Postives = 96/191 (50.26%), Query Frame = 1
Query: 241 MAPSLGIPSHRHYD-PADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQEEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRALSAPPPAVACATIRMA 810
MA + PS Y P+ + AA + + RL T TA++L HR+ I C+FLA K+TE PR+LRDV+NV + + P Y KER+++ EQ +LR I F +D P PY+ LLN A+ L++ R + A LA+D+ + RAL PP +A ++I +A
Sbjct: 1 MAAPVPSPSQSSYTTPSPKKHAA-----SSFIADCSARLHLGHVPTSTAMVLAHRYFATHAAPHSFPQHVDIGAACIFLATKITEKPRKLRDVMNVAYCVAHNVNTPVSTGHEYSAFKERLLDAEQHVLRAIRFDMDVPLPYQHLLNLAKLLQVSRVVVQIALTLASDLFYSARALEYPPHVIAASSIYLA 186
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A0L0S947_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S947_ALLM3) HSP 1 Score: 104 bits (260), Expect = 1.930e-21 Identity = 74/207 (35.75%), Postives = 107/207 (51.69%), Query Frame = 1
Query: 232 LRCMAPSLGI---PSHRHYDPADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLH---MLTRAQEEPPLLD---KAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRAT-TRTAWGLANDVLFCPRALSAPPPAVACATIRMAARIH 822
L +AP + PS H +E LR+ ++ RAG L PQ + GTA +L HRF + K RD++L LFLA K+ E PRR+RD+INV+H +L + +PP+LD Y ++ ++ E LL+ + F V P+ L+NY +++RL R +TAW ND P P VACA I++AA H
Sbjct: 9 LNTVAPPAALDRTPSMDHEIDPQLE-LRLRILACDLIQRAGRALSIPQFSVGTAQVLLHRFYFAASLKKFG-VRDMVLGA-LFLATKLEETPRRMRDIINVVHHAVLLQQGHPDPPMLDVHGMEYADLERAMMRAEMYLLKYLAFHVHVAHPHMWLVNYLQAMRLARPPLAQTAWNYVNDSYRLPLLCMVQPHVVACAAIQLAADDH 212 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1198.1729.1 >prot_H-canaliculatus_F_contig1198.1729.1 ID=prot_H-canaliculatus_F_contig1198.1729.1|Name=mRNA_H-canaliculatus_F_contig1198.1729.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=470bp WSGRGQRKTVAKAPSFSAHPSLLFSSHELSISPTPRDVLNTKRLCDGRPLback to top mRNA from alignment at H-canaliculatus_F_contig1198:5455..7804+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1198.1729.1 ID=mRNA_H-canaliculatus_F_contig1198.1729.1|Name=mRNA_H-canaliculatus_F_contig1198.1729.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2350bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1198:5455..7804+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1198:5455..7804+ >mRNA_H-canaliculatus_F_contig1198.1729.1 ID=mRNA_H-canaliculatus_F_contig1198.1729.1|Name=mRNA_H-canaliculatus_F_contig1198.1729.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2820bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1198:5455..7804+ (Hapterophycus canaliculatus Oshoro5f female)back to top |