mRNA_H-canaliculatus_F_contig1196.1713.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1196.1713.1
Unique NamemRNA_H-canaliculatus_F_contig1196.1713.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 1.680e-54
Identity = 86/150 (57.33%), Postives = 112/150 (74.67%), Query Frame = 1
Query:    7 LIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGEDQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
            L+ LV+++ WFP    DV+GRQ +PVELKVL+ L  L RGN F D+   S +S   + ++FHRF K FA E Y ++V+LPTGED  KVME+YD +GF GA+GSTDVTH+ W  CP++ AR ++GKEG  T+A+Q TVDHSGRVLAVT+GF
Sbjct:  146 LVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGF 295          
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 6.830e-54
Identity = 86/151 (56.95%), Postives = 110/151 (72.85%), Query Frame = 1
Query:    4 ELIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGEDQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
            EL+ALVK++ WFP   +D SGR+ IPV+LKVL+ L  L RGN F D+   S +S     A+FHRF + FA E Y +H+ LPTG+ Q KVM +YD LGF+GA GSTDVTH+ W  CP++ AR ++GKEG+ T+AYQ TVDH+ RVLAVT GF
Sbjct:  129 ELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGF 279          
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 8.260e-49
Identity = 84/152 (55.26%), Postives = 104/152 (68.42%), Query Frame = 1
Query:    7 LIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGEDQ--DKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
            L+ALVK K WF   V D  G    PVE KVL+ L  LGRGN F  + Q S MS   +Q  FH+F + FA E Y + +HLPT E    D VM++YD LGFTGA+GS DVTH+ W+ CP++ AR ++GKEGF TIAYQ TVDH+GR +AVT+GF
Sbjct:   57 LVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGF 208          
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 5.470e-46
Identity = 81/152 (53.29%), Postives = 104/152 (68.42%), Query Frame = 1
Query:    7 LIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGE--DQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
            L+ALVK K WF     D +GRQ  PVE KVL+ L  LGRGN F  + Q S MS A +QA FH F K FA E Y +H++LP+ +  + D VM++YD LGF+GA+GS DVTH+ W  CP++  R ++GKEG  TI YQ TV+H+GR  AVT+GF
Sbjct:   97 LVALVKSKNWFATAGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGF 248          
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.520e-45
Identity = 78/152 (51.32%), Postives = 105/152 (69.08%), Query Frame = 1
Query:    7 LIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGE--DQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
            L+ALVK K WF     D + RQ  PVE KVL+ L  LGRGN F  + Q S MS   +Q  FH+F K FA E Y +H++LP+ +  + D VM++YD LGF+GA+GS DVTH+ W+ CP++ AR ++GKEG  T+ YQ TV+H+GR +AVT+GF
Sbjct:   70 LVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGF 221          
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 5.620e-45
Identity = 78/152 (51.32%), Postives = 105/152 (69.08%), Query Frame = 1
Query:    7 LIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGE--DQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
            L+ LVK+K WF    +D  GR+C PVE KVL+ L  LGRGN F  +   S MS   +Q  FH+F + FA E Y +H+ LP+ E  + D+VM +Y+ LGF GA+GSTDVTH+ W+ CP++  R ++GKEG  T+ YQ TV+H+GRVLAVT+GF
Sbjct:   99 LVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGF 250          
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 4.140e-44
Identity = 79/151 (52.32%), Postives = 102/151 (67.55%), Query Frame = 1
Query:    4 ELIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGEDQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
            EL+ L + KRWF    KD + R+ IP+ELKVL      G+GN F+D+ Q S MSE++ QA FH+F +  A E + +H++LPTG   D+VM  +  LG TGA GSTDVTH+    CP +  R F+GKEGF TIAY+ TVDH+GR LAVT GF
Sbjct:  109 ELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGF 253          
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 4.600e-44
Identity = 75/138 (54.35%), Postives = 98/138 (71.01%), Query Frame = 1
Query:   46 RVKDVSGRQCIPV-ELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGEDQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
            +  D+S R C P    +VL+ L  L RGN F D+   S +S   + ++FHRF K FA E Y ++V+LPTGED  KVME+YD +GF GA+GSTDVTH+ W  CP++ AR ++GKEG  T+A+Q TVDHSGRVLAVT+GF
Sbjct:   67 KATDLSARCCFPPPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGF 204          
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5L642_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L642_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 5.410e-44
Identity = 75/144 (52.08%), Postives = 100/144 (69.44%), Query Frame = 1
Query:    7 LIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGE--DQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGR 432
            L+ALVK K WF     D +GR   PVE KVL+ L  LGRGN F  + Q S MS A +QA FH+F K FA E Y +H++LP+ +  + D VM++YD LGF+GA+GS DVTH+ W+ CP++ AR ++GKEG  T+ YQ TV+H+GR
Sbjct:   97 LVALVKSKNWFVTAGCDGAGRHSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGR 240          
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 6.980e-44
Identity = 70/122 (57.38%), Postives = 92/122 (75.41%), Query Frame = 1
Query:   91 KVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGEDQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
            +VL++L  LGRGN F+D+ Q S MS+ +  A+FH+F K FA+E + +H++LPTG  QD+VM  YD LG TGAIGSTDVTH+ W  CP +  R ++GKEGF TIAYQ TVDH+GR +A+T GF
Sbjct:    3 QVLTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGF 124          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPH7_9PHAE1.680e-5457.33Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE6.830e-5456.95Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE8.260e-4955.26DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FPI7_ECTSI5.470e-4653.29Transposon protein, putative, Pong sub-class n=1 T... [more]
A0A6H5JHI0_9PHAE1.520e-4551.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE5.620e-4551.32Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE4.140e-4452.32DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KY50_9PHAE4.600e-4454.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L642_9PHAE5.410e-4452.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KH50_9PHAE6.980e-4457.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1196contigH-canaliculatus_F_contig1196:9683..11107 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score113.6
Seed ortholog evalue8.1e-23
Seed eggNOG ortholog2880.D7FSK2
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size461
Cds size459
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1196.1713.1prot_H-canaliculatus_F_contig1196.1713.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1196 9684..11107 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928899.823038-CDS-H-canaliculatus_F_contig1196:9683..98751622928899.823038-CDS-H-canaliculatus_F_contig1196:9683..9875Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1196 9684..9875 -
1696845606.2031188-CDS-H-canaliculatus_F_contig1196:9683..98751696845606.2031188-CDS-H-canaliculatus_F_contig1196:9683..9875Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1196 9684..9875 -
1622928899.8403435-CDS-H-canaliculatus_F_contig1196:10521..106951622928899.8403435-CDS-H-canaliculatus_F_contig1196:10521..10695Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1196 10522..10695 -
1696845606.2228494-CDS-H-canaliculatus_F_contig1196:10521..106951696845606.2228494-CDS-H-canaliculatus_F_contig1196:10521..10695Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1196 10522..10695 -
1622928899.853699-CDS-H-canaliculatus_F_contig1196:11014..111071622928899.853699-CDS-H-canaliculatus_F_contig1196:11014..11107Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1196 11015..11107 -
1696845606.2481666-CDS-H-canaliculatus_F_contig1196:11014..111071696845606.2481666-CDS-H-canaliculatus_F_contig1196:11014..11107Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1196 11015..11107 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1196.1713.1

>prot_H-canaliculatus_F_contig1196.1713.1 ID=prot_H-canaliculatus_F_contig1196.1713.1|Name=mRNA_H-canaliculatus_F_contig1196.1713.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=153bp
TELIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQ
ASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGEDQDKVMEEYDHLGFT
GAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTK
GFG
back to top

mRNA from alignment at H-canaliculatus_F_contig1196:9683..11107-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1196.1713.1 ID=mRNA_H-canaliculatus_F_contig1196.1713.1|Name=mRNA_H-canaliculatus_F_contig1196.1713.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1425bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1196:9683..11107- (Hapterophycus canaliculatus Oshoro5f female)
ACGGAGCTGATCGCTCTCGTGAAGGAGAAGAGGTGGTTTCCCATGCGCGT AAAGGACGTCTCGGGTCGCCAGTGCATCCCAGTGGAGCTGAAGGTGGGTT CCCTCGCGTCGGTATGGAAATAGGGTTAGTGAACGAAGGGAGGTACTGGC TCGTCAAAGGCGCGTTCGAGTTTCTAGAGTGTCTGCCCCTGCTGCTGCAA GAAGTAAGTGTAGAGGGACCTCGGCACAGACCGGTCACCATGTGCAGCAC TTCGCTTGGCTTCGGGGTATGTTCTTCGAGCAACGTGTGTGCGCGTGTGG TTAGGTGGATGCGTGCATGAGTGCAACTCGATCGGGGGTAGGCATAGGTT GTTTTGACGTGTCCTCATCATCAGGAGCACTCCCGGCATGAACGTATATT TTACACCAACAGGTCTTATCATCCCTCCATTTTTTAGGGAGGGGCAACTT CTTCGAAGACATGAGCCAGGCGTCGCACATGAGCGAGGCGGTGATCCAAG CCAGCTTCCACAGGTTCAACAAGCTGTTCGCGGAGGAGTTCTACCACGAT CACGTCCACTTGCCCACTGGCGAGGACCAGGACAAGGTGATCACGAATGA CAGCCTTTTCGACGAAGCCGACGGACGGCTAATCTCCCACTTTCGGCATT ACATTAAAAGTCTCCCTCTACAAGTATTCCTTTTTAACTTGAAACGCCAA GGTCATCAAACTTGTACGGAATATCCCGTTGCTTTCGTCAGCCGAGACGC TACAGCAGCAGAGGCATGTGTGGGTAGAAATTTATAGAGTTAGCTATGAC GTGTACGCGCGGTGCGCAGATGATGCGAAAACAATTGCCGGAAAAACGCC GGCGTCGATGCCCAGAGGGAGCGAGTTCAAAATAAGCCCTCCGTAGGCTA ACTCGGTTTGGAGATGCCCTCGCCTGCGCTCTGCGTGCAGTAGCGAGAGC GTTTGACAGTTCACTTTGAGGAAAATACTCGGGGGCGCCGTGAACATGAC GACTTCGTGTAATCTTTATGACGGACGTATGTGGGCGTGATGTCAAGATT GACATGGTCTGCTGCGGCTGCTGTTGGTAGGGCGGTTTGTAGCTGTGCTT CACCGACCGATGTCGCCTTGCGTGCATCCTGTTTCGATGGGTGTTCCTTT TCAATTGTTGGCTCTTTTTATGAAAATACCTTGGTGATCGCTCTTGACGG GTATGTCATTAAACACCGTGCCGGTATTGCAGGTGATGGAGGAGTACGAT CACCTGGGATTCACCGGAGCGATAGGGTCGACTGATGTCACTCACGTGAA ATGGGCGTGCTGCCCGCATTCGTGGGCGCGGCAATTCTCGGGGAAGGAGG GATTTGCGACCATCGCGTACCAGGCGACCGTGGATCACAGCGGACGGGTG CTCGCAGTCACGAAGGGTTTTGGCG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1196:9683..11107-

>mRNA_H-canaliculatus_F_contig1196.1713.1 ID=mRNA_H-canaliculatus_F_contig1196.1713.1|Name=mRNA_H-canaliculatus_F_contig1196.1713.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=918bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1196:9683..11107- (Hapterophycus canaliculatus Oshoro5f female)
ACGGAGCTGATCGCTCTCGTGAAGGAGAAGAGGTGGTTTCCCATGCGCGT
AAAGGACGTCTCGGGTCGCCAGTGCATCCCAGTGGAGCTGAAGACGGAGC
TGATCGCTCTCGTGAAGGAGAAGAGGTGGTTTCCCATGCGCGTAAAGGAC
GTCTCGGGTCGCCAGTGCATCCCAGTGGAGCTGAAGGTCTTATCATCCCT
CCATTTTTTAGGGAGGGGCAACTTCTTCGAAGACATGAGCCAGGCGTCGC
ACATGAGCGAGGCGGTGATCCAAGCCAGCTTCCACAGGTTCAACAAGCTG
TTCGCGGAGGAGTTCTACCACGATCACGTCCACTTGCCCACTGGCGAGGA
CCAGGACAAGGTCTTATCATCCCTCCATTTTTTAGGGAGGGGCAACTTCT
TCGAAGACATGAGCCAGGCGTCGCACATGAGCGAGGCGGTGATCCAAGCC
AGCTTCCACAGGTTCAACAAGCTGTTCGCGGAGGAGTTCTACCACGATCA
CGTCCACTTGCCCACTGGCGAGGACCAGGACAAGGTGATGGAGGAGTACG
ATCACCTGGGATTCACCGGAGCGATAGGGTCGACTGATGTCACTCACGTG
AAATGGGCGTGCTGCCCGCATTCGTGGGCGCGGCAATTCTCGGGGAAGGA
GGGATTTGCGACCATCGCGTACCAGGCGACCGTGGATCACAGCGGACGGG
TGCTCGCAGTCACGAAGGGTTTTGGCGTGATGGAGGAGTACGATCACCTG
GGATTCACCGGAGCGATAGGGTCGACTGATGTCACTCACGTGAAATGGGC
GTGCTGCCCGCATTCGTGGGCGCGGCAATTCTCGGGGAAGGAGGGATTTG
CGACCATCGCGTACCAGGCGACCGTGGATCACAGCGGACGGGTGCTCGCA
GTCACGAAGGGTTTTGGC
back to top