mRNA_H-canaliculatus_F_contig11950.1708.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11950.1708.1
Unique NamemRNA_H-canaliculatus_F_contig11950.1708.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11950.1708.1 vs. uniprot
Match: D7FQZ4_ECTSI (Acetohydroxy-acid reductoisomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQZ4_ECTSI)

HSP 1 Score: 538 bits (1385), Expect = 3.880e-188
Identity = 273/297 (91.92%), Postives = 278/297 (93.60%), Query Frame = 1 
Query:    1 QGATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISKGGILKLYEGLDKAGQDEFKASDEGREGAVYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWKASLFPTF*QVRADRVEEEIPLNPFTAGVYVATMMAQIDVLQEGGHSYTEIVNESVIEAVDSLCPYMHYK 891
            +GATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDV GKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISK GILKLYE LD+AG+DEFK+        VYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWK        QVRADRVEEEIPLNPFTAGVYVATMMAQIDVL+EGGHSYTEIVNESVIEAVDSLCPYMHYK
Sbjct:  198 KGATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVTGKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISKMGILKLYESLDQAGKDEFKS--------VYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWKVGE-----QVRADRVEEEIPLNPFTAGVYVATMMAQIDVLKEGGHSYTEIVNESVIEAVDSLCPYMHYK 481
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BLAST of mRNA_H-canaliculatus_F_contig11950.1708.1 vs. uniprot
Match: A0A835Z8S5_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S5_9STRA)

HSP 1 Score: 439 bits (1130), Expect = 1.030e-149
Identity = 221/296 (74.66%), Postives = 249/296 (84.12%), Query Frame = 1 
Query:    4 GATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISKGGILKLYEGLDKAGQDEFKASDEGREGAVYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWKASLFPTF*QVRADRVEEEIPLNPFTAGVYVATMMAQIDVLQEGGHSYTEIVNESVIEAVDSLCPYMHYK 891
            GATLGLSHGFLLGHL+++G+KFPD+INVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDG+AT+IALGWSIALGSPFSF TTLTDEY+SDIYGERGILLGAVH I+E+L RR+ ++GM+ EEAFKQS ESITGPITK IS  G+LKLY  L    Q +F+ +        YSA Y PA+EI+QECY+EV SGNEIRSVVM G RL +   GKIDGT TW+        +VRA R E++IPLNPFTAGVYVA MMAQIDVL++ GHSYTEIVNESVIEAVDSLCPYMHYK
Sbjct:  182 GATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIA--------YSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTWQVGE-----KVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYK 464
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BLAST of mRNA_H-canaliculatus_F_contig11950.1708.1 vs. uniprot
Match: A0A7S2W6X2_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6X2_9STRA)

HSP 1 Score: 423 bits (1087), Expect = 4.710e-143
Identity = 207/296 (69.93%), Postives = 249/296 (84.12%), Query Frame = 1 
Query:    4 GATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISKGGILKLYEGLDKAGQDEFKASDEGREGAVYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWKASLFPTF*QVRADRVEEEIPLNPFTAGVYVATMMAQIDVLQEGGHSYTEIVNESVIEAVDSLCPYMHYK 891
            GATLGLSHGFLLGHL+++G++FPD+INV+AVCPKGMGPSVRRLYEQGK+VNG+GIN+SF VHQDV G+AT+IALGW IALGSPF F TTLT+EY+SDIYGERGILLG VHGI+E+LFRR+V QGM+PE+AFK S ESITGPITK ISK GI+ LYEGL    +  F+ +        YSA Y P++EI+QECY+EV SGNEIRSV++ GARL++   GKIDGT+TW+        +VRA R E++IPLN FTAGVYVA MMAQIDVL++ GHS++E+VNESVIEAVDSLCPYMH+K
Sbjct:  193 GATLGLSHGFLLGHLESIGEEFPDNINVIAVCPKGMGPSVRRLYEQGKSVNGAGINSSFGVHQDVTGRATEIALGWGIALGSPFMFKTTLTEEYKSDIYGERGILLGGVHGIVESLFRRYVAQGMTPEDAFKNSCESITGPITKKISKEGIMALYEGLSDEDKKVFEEA--------YSASYLPSREILQECYDEVASGNEIRSVILHGARLSEFPIGKIDGTYTWQVGE-----KVRAARDEDKIPLNSFTAGVYVAMMMAQIDVLRKAGHSFSEVVNESVIEAVDSLCPYMHFK 475
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BLAST of mRNA_H-canaliculatus_F_contig11950.1708.1 vs. uniprot
Match: W7TPK9_9STRA (Acetohydroxy-acid reductoisomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPK9_9STRA)

HSP 1 Score: 423 bits (1087), Expect = 2.830e-142
Identity = 209/296 (70.61%), Postives = 247/296 (83.45%), Query Frame = 1 
Query:    4 GATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISKGGILKLYEGLDKAGQDEFKASDEGREGAVYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWKASLFPTF*QVRADRVEEEIPLNPFTAGVYVATMMAQIDVLQEGGHSYTEIVNESVIEAVDSLCPYMHYK 891
            GATLGLSHGFLLG+L ++G  FP+ INV+AVCPKGMGPSVRRLYEQGKTVNG+GIN+SFAVH+D +GKAT++ALGW +A+GSPF F TT+T+EY+SDIYGERGILLGAVHGIIETLFRR+V +GM+PE+AFK+S+ESITGPITK ISK G+LKLY  L  A ++ F  +        YSA Y PA+EI+QE Y+EV SGNEIRSVVM   RL++   GKIDGT+TW+         VRA R E+EIPLNPFTAGVYVATMMAQIDVL++ GHS++EIVNESVIEAVDSLCPYMHYK
Sbjct:  198 GATLGLSHGFLLGYLQSIGSDFPEGINVIAVCPKGMGPSVRRLYEQGKTVNGAGINSSFAVHKDANGKATELALGWGVAIGSPFLFKTTMTEEYKSDIYGERGILLGAVHGIIETLFRRYVAEGMTPEQAFKESAESITGPITKIISKEGVLKLYNSLSAADKEVFNKA--------YSATYKPAREILQEIYDEVASGNEIRSVVMHSERLSEFPVGKIDGTYTWQVGE-----TVRAARKEDEIPLNPFTAGVYVATMMAQIDVLRKAGHSFSEIVNESVIEAVDSLCPYMHYK 480
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BLAST of mRNA_H-canaliculatus_F_contig11950.1708.1 vs. uniprot
Match: A0A7S0WAC1_9CRYP (Acetohydroxy-acid reductoisomerase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WAC1_9CRYP)

HSP 1 Score: 416 bits (1069), Expect = 3.000e-140
Identity = 207/297 (69.70%), Postives = 241/297 (81.14%), Query Frame = 1 
Query:    1 QGATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISKGGILKLYEGLDKAGQDEFKASDEGREGAVYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWKASLFPTF*QVRADRVEEEIPLNPFTAGVYVATMMAQIDVLQEGGHSYTEIVNESVIEAVDSLCPYMHYK 891
            +GATLGLSHGFLLGHL++ G+KF +DINV+ + PKGMGPSVRRLYEQGK VNG+GINASFAVHQD  GKAT+IALGW IA+GSPF F TTL DEYRSDIYGERGILLGAVHGI+E LFRR+  QGM+PE+AFK S ESITGPITK ISK GI+ +YE      +++F+ +        YSA Y PAK+++QE Y+EV+SGNEIRSV+M G R +    GKIDGT+TWK        +VRA R E+EIP+NP TAG+YVATMMAQIDVL+EGGHSYTEIVNESVIEAVDSLCPYMH K
Sbjct:  194 KGATLGLSHGFLLGHLESRGEKFREDINVILIAPKGMGPSVRRLYEQGKKVNGAGINASFAVHQDYTGKATEIALGWGIAIGSPFIFETTLQDEYRSDIYGERGILLGAVHGIVEGLFRRYTAQGMTPEDAFKNSCESITGPITKLISKNGIMAVYESFSGKEKEQFEQA--------YSAAYTPAKDVLQEIYDEVKSGNEIRSVIMHGDRFDRFPIGKIDGTYTWKVGE-----KVRAARKEDEIPMNPVTAGIYVATMMAQIDVLREGGHSYTEIVNESVIEAVDSLCPYMHAK 477
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BLAST of mRNA_H-canaliculatus_F_contig11950.1708.1 vs. uniprot
Match: K0TKV8_THAOC (Acetohydroxy-acid reductoisomerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TKV8_THAOC)

HSP 1 Score: 410 bits (1053), Expect = 2.710e-138
Identity = 204/296 (68.92%), Postives = 241/296 (81.42%), Query Frame = 1 
Query:    4 GATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISKGGILKLYEGLDKAGQDEFKASDEGREGAVYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWKASLFPTF*QVRADRVEEEIPLNPFTAGVYVATMMAQIDVLQEGGHSYTEIVNESVIEAVDSLCPYMHYK 891
            GATLGLSHGFLLG+LD++G+ FP+D++V+AVCPKGMGPSVRRLYEQGK VNG+GINASFAVHQD  GKAT++ALGW +ALGSPF F T+L+ EYRSDIYGERGILLGAVHGI+E+L+RR+ +QGMSPE+AF +SSESITG I K IS  GI  +YEGL    ++ FK +        YSA Y P+KEI+QE Y+EV SGNEIR+V+M G R+N    GKIDGT TW+        +VRA+R EE IPLNPFTAGVYVATMMAQIDVL E GH Y+E+VNESVIEAVDSLCPYMHY+
Sbjct:  165 GATLGLSHGFLLGYLDSIGESFPEDMDVIAVCPKGMGPSVRRLYEQGKEVNGAGINASFAVHQDKSGKATELALGWGVALGSPFMFETSLSSEYRSDIYGERGILLGAVHGIVESLYRRYQRQGMSPEQAFVESSESITGNIVKTISTQGIKAVYEGLSGDDKEVFKQA--------YSASYLPSKEILQEIYDEVSSGNEIRTVIMHGKRINKFPVGKIDGTDTWQVGE-----KVRAERDEENIPLNPFTAGVYVATMMAQIDVLLEAGHPYSEVVNESVIEAVDSLCPYMHYR 447
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BLAST of mRNA_H-canaliculatus_F_contig11950.1708.1 vs. uniprot
Match: B7GDA6_PHATC (Acetohydroxy-acid reductoisomerase n=2 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GDA6_PHATC)

HSP 1 Score: 409 bits (1050), Expect = 9.620e-138
Identity = 205/296 (69.26%), Postives = 243/296 (82.09%), Query Frame = 1 
Query:    4 GATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISKGGILKLYEGLDKAGQDEFKASDEGREGAVYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWKASLFPTF*QVRADRVEEEIPLNPFTAGVYVATMMAQIDVLQEGGHSYTEIVNESVIEAVDSLCPYMHYK 891
            GATLGLSHGFLLGHLD++G+KFP++++V+AVCPKGMGPSVRRLYEQGK VNG+GIN+SFAVHQDV GKAT++ALGW IALGSPF F T+L  EY SDIYGERGILLGAVHGI+E+L+RR+ +QGMSPE+AF +SSESITG I K IS  GI  +YE LD   ++ F+ +        YSA Y PAKEI+QE Y+EV SGNEIR+V+M GAR++    GKIDGT TWK        +VRA+R E++IPLNPFTAGVYVATMMAQIDVL E GH Y+E+VNESVIEAVDSLCPYMHY+
Sbjct:  172 GATLGLSHGFLLGHLDSIGEKFPENMDVIAVCPKGMGPSVRRLYEQGKDVNGAGINSSFAVHQDVSGKATELALGWGIALGSPFMFETSLRSEYCSDIYGERGILLGAVHGIVESLYRRYQRQGMSPEQAFLESSESITGNIVKIISTKGIKAVYESLDGDDKETFQKA--------YSASYKPAKEILQEIYDEVSSGNEIRTVIMHGARIDKYPVGKIDGTDTWKVGE-----KVRAERDEDKIPLNPFTAGVYVATMMAQIDVLLEEGHPYSEVVNESVIEAVDSLCPYMHYR 454
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BLAST of mRNA_H-canaliculatus_F_contig11950.1708.1 vs. uniprot
Match: L1JJI2_GUITC (Acetohydroxy-acid reductoisomerase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JJI2_GUITC)

HSP 1 Score: 405 bits (1042), Expect = 5.070e-136
Identity = 204/296 (68.92%), Postives = 237/296 (80.07%), Query Frame = 1 
Query:    4 GATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISKGGILKLYEGLDKAGQDEFKASDEGREGAVYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWKASLFPTF*QVRADRVEEEIPLNPFTAGVYVATMMAQIDVLQEGGHSYTEIVNESVIEAVDSLCPYMHYK 891
            GATLGLSHGFLLGHL+++G+ F  DINVV V PKGMGPSVRRLYEQGKTVNG+GIN+SF VHQD  G+AT+IALGW+IA+GSPF F TTL +EY SDIYGERGILLGAVHGI+E LFRR++ QGM+PE+AFK S ESITGPITK ISK GIL +Y+         F+  D+ R    YSA Y PAK+++ E Y+EV+SGNEIRSV+M G R +    GKIDGTFTWK        +VRA R E++IPLNP TAG+Y+ATMMAQIDVL+E GHSYTEIVNESVIEAVDSLCPYMH K
Sbjct:  189 GATLGLSHGFLLGHLESIGETFRKDINVVLVAPKGMGPSVRRLYEQGKTVNGAGINSSFGVHQDATGRATEIALGWAIAIGSPFVFETTLKEEYCSDIYGERGILLGAVHGIVEVLFRRYMSQGMTPEDAFKNSCESITGPITKTISKKGILNVYQ--------MFQGEDKKRFEEAYSASYTPAKDVLAEIYDEVKSGNEIRSVIMHGDRFDKFPIGKIDGTFTWKVGE-----KVRAARKEDQIPLNPTTAGMYIATMMAQIDVLRENGHSYTEIVNESVIEAVDSLCPYMHAK 471
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BLAST of mRNA_H-canaliculatus_F_contig11950.1708.1 vs. uniprot
Match: A0A7S4MXJ6_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXJ6_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 5.080e-135
Identity = 202/296 (68.24%), Postives = 236/296 (79.73%), Query Frame = 1 
Query:    4 GATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISKGGILKLYEGLDKAGQDEFKASDEGREGAVYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWKASLFPTF*QVRADRVEEEIPLNPFTAGVYVATMMAQIDVLQEGGHSYTEIVNESVIEAVDSLCPYMHYK 891
            GATLGLSHGFLLG+L+++G+ FP+D++V+AVCPKGMGPSVRRLYEQGK VNG+GIN+SFAVHQD  GKATD+ALGW +ALGSPF F TTLT EY+SDIYGERGILLGAVHGI+E+L RR+ +QGMSPE+AF +S ESITG I K IS  GI  +Y+ L    +  F+ S        YSA Y PAKEI+QE Y+EV SGNEIR+V+M G RL+    GKIDGT TWK        +VRA R E+ IPLNPFTAGVYVATMMAQIDVL E GH Y+E+VNESVIEAVDSLCPYMHY+
Sbjct:  172 GATLGLSHGFLLGYLESIGEAFPEDMDVIAVCPKGMGPSVRRLYEQGKEVNGAGINSSFAVHQDKSGKATDLALGWGVALGSPFMFETTLTSEYKSDIYGERGILLGAVHGIVESLSRRYQRQGMSPEQAFTESCESITGNIVKTISTQGIKAVYDNLSDDDKKVFETS--------YSASYMPAKEILQEIYDEVASGNEIRTVIMHGDRLDKFPVGKIDGTETWKVGE-----KVRASRDEDNIPLNPFTAGVYVATMMAQIDVLLEAGHPYSEVVNESVIEAVDSLCPYMHYR 454
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BLAST of mRNA_H-canaliculatus_F_contig11950.1708.1 vs. uniprot
Match: B8C486_THAPS (Acetohydroxy-acid reductoisomerase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C486_THAPS)

HSP 1 Score: 400 bits (1029), Expect = 1.310e-134
Identity = 200/296 (67.57%), Postives = 240/296 (81.08%), Query Frame = 1 
Query:    4 GATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISKGGILKLYEGLDKAGQDEFKASDEGREGAVYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWKASLFPTF*QVRADRVEEEIPLNPFTAGVYVATMMAQIDVLQEGGHSYTEIVNESVIEAVDSLCPYMHYK 891
            GATLGLSHGFLLG+L+++G+KFP++++V+AVCPKGMGPSVRRLYEQGK VNG+GINASFAVHQD  GKA+++ALGW +ALGSPF F TTL+ EYRSDIYGERGILLGAVHGI+E+L+RR+ +QGMSPE+AF +S ESITG ITK IS  GI  +Y+GL+   ++ FK +        YSA Y PAKEI+QE Y+EV SGNEIR+V+M G R+N    GKIDGT TW         +VRA R E++ PLNPFTAGVYVATMMAQIDVL E GH Y+E+VNESVIEAVDSL PYMHY+
Sbjct:  169 GATLGLSHGFLLGYLESIGEKFPENMDVIAVCPKGMGPSVRRLYEQGKEVNGAGINASFAVHQDKSGKASELALGWGVALGSPFMFETTLSSEYRSDIYGERGILLGAVHGIVESLYRRYQRQGMSPEQAFTESCESITGKITKIISTKGIKAVYDGLEGEDKEIFKQA--------YSASYMPAKEILQEIYDEVSSGNEIRTVIMHGKRINKFPVGKIDGTDTWVVGE-----KVRATRDEDKTPLNPFTAGVYVATMMAQIDVLLEAGHPYSEVVNESVIEAVDSLAPYMHYR 451
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11950.1708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQZ4_ECTSI3.880e-18891.92Acetohydroxy-acid reductoisomerase n=2 Tax=Ectocar... [more]
A0A835Z8S5_9STRA1.030e-14974.66Acetohydroxy-acid reductoisomerase n=1 Tax=Tribone... [more]
A0A7S2W6X2_9STRA4.710e-14369.93Acetohydroxy-acid reductoisomerase n=1 Tax=Rhizoch... [more]
W7TPK9_9STRA2.830e-14270.61Acetohydroxy-acid reductoisomerase n=2 Tax=Monodop... [more]
A0A7S0WAC1_9CRYP3.000e-14069.70Acetohydroxy-acid reductoisomerase n=1 Tax=Hemisel... [more]
K0TKV8_THAOC2.710e-13868.92Acetohydroxy-acid reductoisomerase n=1 Tax=Thalass... [more]
B7GDA6_PHATC9.620e-13869.26Acetohydroxy-acid reductoisomerase n=2 Tax=Phaeoda... [more]
L1JJI2_GUITC5.070e-13668.92Acetohydroxy-acid reductoisomerase n=2 Tax=Guillar... [more]
A0A7S4MXJ6_9STRA5.080e-13568.24Acetohydroxy-acid reductoisomerase n=1 Tax=Odontel... [more]
B8C486_THAPS1.310e-13467.57Acetohydroxy-acid reductoisomerase n=1 Tax=Thalass... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11950contigH-canaliculatus_F_contig11950:198..3788 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.4
Seed ortholog evalue3.5e-95
Seed eggNOG ortholog2880.D7FQZ4
KEGG rclassRC00726,RC00836,RC00837,RC01726
KEGG koko:K00053
KEGG ReactionR03051,R04439,R04440,R05068,R05069,R05071
KEGG Pathwayko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00019,M00570
GOsGO:0000166,GO:0000287,GO:0003674,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0008150,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0010035,GO:0010038,GO:0030312,GO:0031967,GO:0031975,GO:0036094,GO:0042221,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0046872,GO:0046914,GO:0046983,GO:0048037,GO:0048046,GO:0050661,GO:0050662,GO:0050896,GO:0070402,GO:0071944,GO:0097159,GO:1901265,GO:1901363
EggNOG free text desc.ketol-acid reductoisomerase activity
EggNOG OGs2QQBF@2759,COG0059@1
EC1.1.1.86
COG Functional cat.EH
BiGG ReactioniRC1080.CRv4_Au5_s10_g343_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size891
Cds size600
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928899.1024559-UTR-H-canaliculatus_F_contig11950:197..3051622928899.1024559-UTR-H-canaliculatus_F_contig11950:197..305Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11950 198..305 +
1696845605.9514768-UTR-H-canaliculatus_F_contig11950:197..3051696845605.9514768-UTR-H-canaliculatus_F_contig11950:197..305Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11950 198..305 +
1622928899.2325666-UTR-H-canaliculatus_F_contig11950:3605..37881622928899.2325666-UTR-H-canaliculatus_F_contig11950:3605..3788Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11950 3606..3788 +
1696845606.0318956-UTR-H-canaliculatus_F_contig11950:3605..37881696845606.0318956-UTR-H-canaliculatus_F_contig11950:3605..3788Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11950 3606..3788 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928899.1219652-CDS-H-canaliculatus_F_contig11950:305..3891622928899.1219652-CDS-H-canaliculatus_F_contig11950:305..389Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11950 306..389 +
1696845605.968109-CDS-H-canaliculatus_F_contig11950:305..3891696845605.968109-CDS-H-canaliculatus_F_contig11950:305..389Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11950 306..389 +
1622928899.139974-CDS-H-canaliculatus_F_contig11950:1106..12861622928899.139974-CDS-H-canaliculatus_F_contig11950:1106..1286Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11950 1107..1286 +
1696845605.978664-CDS-H-canaliculatus_F_contig11950:1106..12861696845605.978664-CDS-H-canaliculatus_F_contig11950:1106..1286Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11950 1107..1286 +
1622928899.1582444-CDS-H-canaliculatus_F_contig11950:2161..23171622928899.1582444-CDS-H-canaliculatus_F_contig11950:2161..2317Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11950 2162..2317 +
1696845605.9911613-CDS-H-canaliculatus_F_contig11950:2161..23171696845605.9911613-CDS-H-canaliculatus_F_contig11950:2161..2317Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11950 2162..2317 +
1622928899.1802633-CDS-H-canaliculatus_F_contig11950:2938..31161622928899.1802633-CDS-H-canaliculatus_F_contig11950:2938..3116Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11950 2939..3116 +
1696845606.0083303-CDS-H-canaliculatus_F_contig11950:2938..31161696845606.0083303-CDS-H-canaliculatus_F_contig11950:2938..3116Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11950 2939..3116 +
1622928899.2014275-CDS-H-canaliculatus_F_contig11950:3603..36051622928899.2014275-CDS-H-canaliculatus_F_contig11950:3603..3605Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11950 3604..3605 +
1696845606.020576-CDS-H-canaliculatus_F_contig11950:3603..36051696845606.020576-CDS-H-canaliculatus_F_contig11950:3603..3605Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11950 3604..3605 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11950.1708.1prot_H-canaliculatus_F_contig11950.1708.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11950 306..3605 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11950.1708.1

>prot_H-canaliculatus_F_contig11950.1708.1 ID=prot_H-canaliculatus_F_contig11950.1708.1|Name=mRNA_H-canaliculatus_F_contig11950.1708.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=200bp
MGPSVRRLYEQGKTVNGSGINASFAVHQDVDGKATDIALGWSIALGSPFS
FPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSS
ESITGPITKGISKGGILKLYEGLDKAGQDEFKASDEGREGAVYSACYAPA
KEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWKASLFPTF*
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mRNA from alignment at H-canaliculatus_F_contig11950:198..3788+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11950.1708.1 ID=mRNA_H-canaliculatus_F_contig11950.1708.1|Name=mRNA_H-canaliculatus_F_contig11950.1708.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3591bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11950:198..3788+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGGCGCCACTCTGGGTCTCTCGCACGGGTTCTTGCTTGGCCACCTCGA
CGCCCTCGGGAAGAAGTTCCCCGATGACATCAACGTCGTGGCGGTGTGCC
CCAAGGGCATGGGGCCCTCCGTGCGCCGGCTGTACGAGCAGGGCAAGACC
GTCAACGGCTCCGGCATCAACGCCTCGTTCGCCGTGCACCAGGTGGGCGG
GCGGCGGGGCGTGGTGGGGGGAACGCAAATAGGGAAGGGGGCGGGGGGGA
GGAACACGGGTGAAAGGAGAGGAGGGGGCGCCGCCAGATCGTGGCCGGGA
CCCTGCAAACACGTTGCGTTGTGTGCAGCAGGGTAGCTTAGGAGAGCGAG
CACCGTTTGGTGGTGTGGGGCATCGCCTCTCTCTGTTCGAGTCGTGACTG
GGTGGAGAAGCTCTTCCTGTATGTGTTGCGTTGGGTTGCGTCTTTGTCTT
GTTCGTTCCCTCCATGGTTGTCGGTAATGCACGACGGCCGGCCGCCTACG
TGCTGCGTTCAGCCCCGATAGGTGAAGAAGCGTGCGGACGCGCACGTCTA
GGTCTATAGGTCTATGGGTCTATGGGTCTAAAGGTCTAGAGGTCTTTAAG
TATCTAGGTCTATAGGTCTTCGTATGCATGTCGGCGAAGGACGGTGCGCT
CCAGCGGCATCTCTGTAACACGGGTCGAACACGTCTTGTAGACGAGCCGT
AAAGCACCAGTGCACGAGTGCCCCATGCAACACGCGAATCGTAGTCTAGT
TCACTTCGTTCGGTGCACGTATCATACGTGTATCACACGTGTATCACGCG
TGTCACAGTCTTTCCCACGTGACAACGGAGGCGACGACGACGCTGATGGC
TGTGGGTGTGATTGCCTTTGCTGTTGCTATTGCTGTCGCTGTTGCTGTTG
CTGTTGCAGGACGTGGACGGAAAGGCCACGGACATCGCGCTGGGCTGGTC
TATCGCCCTCGGCTCTCCGTTCTCCTTCCCGACCACGCTCACCGACGAGT
ACCGCAGCGATATCTACGGAGAACGCGGCATCCTGCTGGGTGCCGTGCAC
GGCATCATCGAGACGCTGTTCCGCCGCTTCGTGAAGCAGGTCAGTGTCGA
GCGTCGGCGTGAGAGTCGGCAACGGGGCACTCCGAAGGCAGGAAAGGACT
CGCCGTCCAGACTCTCGAACGCTGATATCGAGGGAGGGGAGGGGAGGGCG
TTTCCGCCAGTCTCATCCGTTCCTGCTTGAAAGCTTGAAAGTGGGGACGT
CTGATCTCCAGCCCCATGTGGGTCTCGTGCGAGCCTTCCGTTTATCTACT
CCTGCATTGCCAAACGTCGATAAGGCAGGAAGACAGAGTGCAGGAGGCGA
ATGGTTGGGTGGGTGGGTTTGTCGCGGTGAGAGAGTTTGGGACATCCACC
CGCGTGCACTTGGAATAGAGGGTTGGGGACCCTGGAAATGAAAGATTGCG
GCGTGATTGCGGCGTGTCGGACTCGTCTGTTGTTTCCGTAAAGAAGCTGC
GCGATGGCCTGAGATCTGGCAATCCTTGAGGCCCTTTGTGGCTGTCTGTA
CAAGCATGTGGTTGACAGTTGGTATCATTCGCTTATGGCAGCATCCTACG
AAGCACGAGTCTTGTAGGATGTTTGAATGGGGTTGGTGGAAGAGACAAGG
CCAACCATGACATACATGCCCACAAGCTGGCCGATGCCGCCAGCCTCCTG
CCTGCTTCCTCCTGCTGGTTGCTTCCCTTTTTATTCTCGCCGTCGAGTCT
CGCTGGCATGGCGAACAGCGAAGGCGTCACCACAAAAAGCCTTTGGCTGG
ATGATGGGATCGTTCGATCAGTGCAGCCGGCAGAGCTGCAAGACGCATGC
CGGATAACCGATCGTAGTCTCCCACGTGAAGAAAGCAGTCACCGCAACAA
AGGACAAGAAGGGTAACCCCAACAAGCTGCACAACCTTCCTTGCCGGTGT
CTTTGTCTTTGCAGGGCATGAGTCCGGAGGAAGCGTTCAAGCAGTCCTCC
GAGTCCATCACCGGCCCCATCACCAAGGGCATCAGCAAGGGAGGCATCCT
CAAGCTGTACGAGGGGCTCGACAAGGCGGGCCAGGACGAATTTAAGGCGA
GTGACGAGGGCCGAGAGGGTGTACGACGGTGATACTCGCCGGGAACGACG
AGGTATTTAAGTAAAACACCTTGGTATGTTGGTGTCGCCGCTGGCGTCCC
TGGAAGGCGGAAGGCGGAAACACTCAAGGATGTTCGCCTATACAGGCGCG
AAGCTCAACAAGAGGCGGTGATCAAGTGGGGCATGGAAACAGAAGAAGCC
TAACGGAGCCACCAAAAGAAACGGGGAGGGGCGGACAGATCCCTCTCGTT
GGGGTGGATTGAGGGAGAAAATTATGGTATGGGTGGGATGCTTTCACCCT
CATTCATGTTCGGCGGCTGAGGATGTTATTTTCGTCCCTCCATCATCTTG
ACCCAGAGACTCTGAGCGTGTGTGAGAGAGCTTGCGGGTTTTCGTCGAAC
GACCACCTCCCTAGCGCTGCGAGCGCTGCAGCAGGACTTAGCACCACCAT
CTCCAAAAACCCCTCGCTGTCGCGTTGTTGCCATCATGCCGCTTCTGTGC
GACTGTGTACGCGCGGTCCTCCACCCGTGTGTCTTTTCTGTCCCGCCTCC
GCCCCCCTCTCCCTCCTTGGCGCTCAGGATTTAAGCCGCTTTTGTGCCAC
CCCCCCCGTCCCTTCAATTGTTTCGGACAAAAACGAACCAGGCGGTGTAC
TCTGCGTGCTACGCCCCCGCGAAGGAGATCATGCAGGAGTGCTACAATGA
GGTCCGCAGCGGTAACGAGATCCGCTCCGTCGTCATGCAGGGGGCCCGCT
TGAACGACATCAACACGGGAAAGATCGATGGCACCTTCACCTGGAAGGCG
AGCCTCTTCCCAACTTTCTGTGGACCCGCTTTCTGAACGTTGTGCCGTTC
GTCTGTGGGGCCCAAGCCGCTCCCGGCTGGCTGCCTCGATCGCGGCTTCT
TTCGGCGTAGAGGGTGTCGAAATTGAAGCCTTGCCTTTCCCACGAACAAG
AAAACAAATATCGTCCGTTTGTGGGCCCAAACCGCTCCCGGCTGGCTGCC
TCGATCCCGGCTGCTTTCGGCAGAGGGGGTGTCGAAGTTCAAGCCGTCAC
TTTTCCCAGGGACTAGAAAAAAGATATCGAAGAAGTTTTGGGGCGGTCCG
CAGGATGTGCGCCTGGAAGACCTACGCACGCTTGTGTGTGGATGCGGGGT
AGGTGGGTAGCTCTACAGGTTTTGCCAAGTGCGGAGCTCAGCTGTCCTTC
CCTGGCCCCCCTCTAAAACGCCTCCCTCTTTTTTCCCGCCCCCCTCTACC
CCTTTCGTCCGCGGCTATTCTCTTTGCCCCCTCCGCCCGACCCCTCCAGG
TGGGAGAGCAGGTGCGCGCGGACCGCGTCGAGGAGGAGATCCCCCTCAAC
CCCTTTACCGCGGGCGTGTACGTAGCCACCATGATGGCGCAGATCGACGT
CCTCCAGGAGGGCGGCCATTCGTACACGGAGATCGTGAACGAGTCGGTCA
TCGAAGCCGTCGACTCCCTGTGCCCGTACATGCACTACAAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11950:198..3788+

>mRNA_H-canaliculatus_F_contig11950.1708.1 ID=mRNA_H-canaliculatus_F_contig11950.1708.1|Name=mRNA_H-canaliculatus_F_contig11950.1708.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1200bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11950:198..3788+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGGGCCCTCCGTGCGCCGGCTGTACGAGCAGGGCAAGACCGTCAACGG
CTCCGGCATCAACGCCTCGTTCGCCGTGCACCAGATGGGGCCCTCCGTGC
GCCGGCTGTACGAGCAGGGCAAGACCGTCAACGGCTCCGGCATCAACGCC
TCGTTCGCCGTGCACCAGGACGTGGACGGAAAGGCCACGGACATCGCGCT
GGGCTGGTCTATCGCCCTCGGCTCTCCGTTCTCCTTCCCGACCACGCTCA
CCGACGAGTACCGCAGCGATATCTACGGAGAACGCGGCATCCTGCTGGGT
GCCGTGCACGGCATCATCGAGACGCTGTTCCGCCGCTTCGTGAAGCAGGA
CGTGGACGGAAAGGCCACGGACATCGCGCTGGGCTGGTCTATCGCCCTCG
GCTCTCCGTTCTCCTTCCCGACCACGCTCACCGACGAGTACCGCAGCGAT
ATCTACGGAGAACGCGGCATCCTGCTGGGTGCCGTGCACGGCATCATCGA
GACGCTGTTCCGCCGCTTCGTGAAGCAGGGCATGAGTCCGGAGGAAGCGT
TCAAGCAGTCCTCCGAGTCCATCACCGGCCCCATCACCAAGGGCATCAGC
AAGGGAGGCATCCTCAAGCTGTACGAGGGGCTCGACAAGGCGGGCCAGGA
CGAATTTAAGGCGAGTGACGAGGGCCGAGAGGGTGGCATGAGTCCGGAGG
AAGCGTTCAAGCAGTCCTCCGAGTCCATCACCGGCCCCATCACCAAGGGC
ATCAGCAAGGGAGGCATCCTCAAGCTGTACGAGGGGCTCGACAAGGCGGG
CCAGGACGAATTTAAGGCGAGTGACGAGGGCCGAGAGGGTGCGGTGTACT
CTGCGTGCTACGCCCCCGCGAAGGAGATCATGCAGGAGTGCTACAATGAG
GTCCGCAGCGGTAACGAGATCCGCTCCGTCGTCATGCAGGGGGCCCGCTT
GAACGACATCAACACGGGAAAGATCGATGGCACCTTCACCTGGAAGGCGA
GCCTCTTCCCAACTTTCTGCGGTGTACTCTGCGTGCTACGCCCCCGCGAA
GGAGATCATGCAGGAGTGCTACAATGAGGTCCGCAGCGGTAACGAGATCC
GCTCCGTCGTCATGCAGGGGGCCCGCTTGAACGACATCAACACGGGAAAG
ATCGATGGCACCTTCACCTGGAAGGCGAGCCTCTTCCCAACTTTCTAGAG
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