mRNA_H-canaliculatus_F_contig11937.1697.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11937.1697.1 vs. uniprot
Match: A0A6H5JH19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH19_9PHAE) HSP 1 Score: 253 bits (646), Expect = 5.710e-77 Identity = 125/134 (93.28%), Postives = 129/134 (96.27%), Query Frame = 1
Query: 7 SRKVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSGFLGMFAVKLYVLQAIELPAYTTGEVSHENPRAHFVELPWPTWGAALPPMWSLFIPPNASSGGVYGDAVPDRPDG 408
S +VWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWS FLGMF+VKLYVLQAIELPAYT+GEVS + PRAHFVELPWPTWGAALPPMWSLFIPPNASS GVYGDAVPDRPDG
Sbjct: 521 SLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFSVKLYVLQAIELPAYTSGEVSQDAPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGDAVPDRPDG 654
BLAST of mRNA_H-canaliculatus_F_contig11937.1697.1 vs. uniprot
Match: A0A835YR56_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR56_9STRA) HSP 1 Score: 137 bits (345), Expect = 7.050e-37 Identity = 67/127 (52.76%), Postives = 90/127 (70.87%), Query Frame = 1
Query: 22 LYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSGFLGMFAVKLYVLQAIELPAYTTGEVSHENPRAHFVELPWPTWGAALPPMWSLFIPPNASSGGVYGDAVPDRP 402
L+GM++L+EY+ L+FVR+ + I FF R L F A+H+YF+ MG+FGLAA S FL + LY + +E+PA T GE+S E+PRA FVELPWP+WGA+LPP W+LF+P N GVY + P RP
Sbjct: 123 LFGMMLLWEYYCLVFVRSAAGIAFFPRVTMLYFTAYHMYFFMNPMGYFGLAALSTFLLVLHAMLYTVTDLEVPALTRGEISAEHPRACFVELPWPSWGASLPPTWTLFLPTNTRVRGVYENIRPSRP 249
BLAST of mRNA_H-canaliculatus_F_contig11937.1697.1 vs. uniprot
Match: D8LRD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD0_ECTSI) HSP 1 Score: 126 bits (317), Expect = 1.420e-31 Identity = 64/89 (71.91%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 148 FQMGFFGLAAWSGFLGMFAVKLYVLQAIELPAYTTGEVSHENPRAHFVELPWPTWGAALPPMWSLFIPPNASSGGVYGDAVPDRPDGAG 414
FQ GF G G F +AIELPAYT+GEVS + PRAHFVELPWPTWGAALPPMWSLFIPPNASS GVYGDAVPDRPDG G
Sbjct: 204 FQRGFSGWGRGPPSPGWFPFSSTWWKAIELPAYTSGEVSQDAPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGDAVPDRPDGGG 292
BLAST of mRNA_H-canaliculatus_F_contig11937.1697.1 vs. uniprot
Match: A0A7S3Y6C3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C3_HETAK) HSP 1 Score: 116 bits (290), Expect = 2.850e-28 Identity = 58/128 (45.31%), Postives = 79/128 (61.72%), Query Frame = 1
Query: 1 PPSRKVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSGFLGMFAVKLYVLQAIELPAYTTGEVSHENPRAHFVELPWPTWGAALPPMWSLFIPPNASSGGVYGD 384
P +VWL+G +ML+EY+ ++F+R+R +FF R L FV +H+YFY F G+F L A + F M L+ LQ +E PA GEVS PRA + ELPWP + L P W+LF+PP + GVY D
Sbjct: 170 PAGLEVWLFGSMMLWEYYGMLFLRSRGGSLFFPRLCGLYFVGYHLYFYSFNYGYFDLLALAHFCLMLHAMLFTLQHLEAPALLRGEVSPAAPRAVYTELPWPAHPSELAPEWTLFVPPAEAVRGVYDD 297
BLAST of mRNA_H-canaliculatus_F_contig11937.1697.1 vs. uniprot
Match: A0A7S4DCY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCY7_HETAK) HSP 1 Score: 116 bits (290), Expect = 3.190e-27 Identity = 58/128 (45.31%), Postives = 79/128 (61.72%), Query Frame = 1
Query: 1 PPSRKVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSGFLGMFAVKLYVLQAIELPAYTTGEVSHENPRAHFVELPWPTWGAALPPMWSLFIPPNASSGGVYGD 384
P +VWL+G +ML+EY+ ++F+R+R +FF R L FV +H+YFY F G+F L A + F M L+ LQ +E PA GEVS PRA + ELPWP + L P W+LF+PP + GVY D
Sbjct: 358 PAGLEVWLFGSMMLWEYYGMLFLRSRGGSLFFPRLCGLYFVGYHLYFYSFNYGYFDLLALAHFCLMLHAMLFTLQHLEAPALLRGEVSPAAPRAVYTELPWPAHPSELAPEWTLFVPPAEAVRGVYDD 485
BLAST of mRNA_H-canaliculatus_F_contig11937.1697.1 vs. uniprot
Match: A0A7S2AJJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJJ9_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.060e-24 Identity = 50/128 (39.06%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 1 PPSRKVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSGFLGMFAVKLYVLQAIELPAYTTGEVSHENPRAHFVELPWPTWGAALPPMWSLFIPPNASSGGVYGD 384
P ++W+YG+VM++EY+++I++R+ ++I F R + F+AFH Y Y GF+ +A + FL M ++ L +E+PA + EVS + PRA + LPW W A LPP W+LF+P N+ + +Y D
Sbjct: 163 PSGLELWIYGIVMIWEYYSMIYLRSAAAIYFLPRFTLVYFIAFHFYLYGTAYGFYPVALLTMFLAMCHSLVFCLTRLEVPASSRLEVSFDQPRALYTALPWTAWSAMLPPSWTLFLPLNSRAQNIYDD 290
BLAST of mRNA_H-canaliculatus_F_contig11937.1697.1 vs. uniprot
Match: A0A7S1UFL8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFL8_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 2.820e-21 Identity = 56/142 (39.44%), Postives = 82/142 (57.75%), Query Frame = 1
Query: 16 VWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSGFLGMFAVKLYVLQAIELPAYTTGEVSHENPRAHFVELPWPTWGAALPPMWSLFIPPNASSGGVYGDAVP---DRPDGAGAGGGAG 432
+WL+ ++M+ EY++++F+R++++I F R LS + +H+Y Y F GF+ V LY +E A +GEVS E PR FV LP+P W A LPP+W++F+PPN +S VY VP RP AG G G
Sbjct: 256 LWLFALIMVLEYYSMVFLRSKAAIGFAPRMLMLSLLCYHLYIYSFPFGFYRPVLLLLTSVCVNVCLYCCVHLERQAVISGEVSFEQPRGAFVRLPYPIWQADLPPLWTVFVPPNETSTNVYNMPVPRAGGRPTPGDAGAGVG 397
BLAST of mRNA_H-canaliculatus_F_contig11937.1697.1 vs. uniprot
Match: A0A7S2SN08_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SN08_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 7.730e-20 Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 1
Query: 1 PPSRKVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSGFLGMFAVKLYVLQAIELPAYTTGEVSHENPRAHFVELPWPTWGAALPPMWSLFIPPNASSGGVYGD 384
P + ++G+VM+ EYF++IF R+ +I FF R ++AFH+YFY GF +A + + +Y L+ E+ A+ G VS E PR+ + E+P P W LPP+WS+F P N S +Y D
Sbjct: 363 PAGQMQQIFGLVMICEYFSMIFARSLLTIQFFPRVMMFYYIAFHLYFYLVPYGFTSMATITWYAACLHAMVYCLRYHEVKAFQRGRVSFEQPRSLYSEIPQPQWNMLLPPLWSMFYPLNRSQRSIYDD 490
BLAST of mRNA_H-canaliculatus_F_contig11937.1697.1 vs. uniprot
Match: A0A7S0XCD7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCD7_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 9.840e-18 Identity = 45/130 (34.62%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 1 PPSRKVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSGFLGMFAVKLYVLQAIELPAYTTGEVSHENPRAHFVELPWPTWGAALPPMWSLFIPPNASSGGVYGDAV 390
P +++W++ ++ML EY+++I++R+R SI+ F R +++ +H+Y Y GF LA F+ M ++ ++ ELPAY++G VS + PR +PWP W A+ P ++LF P + S +YG A
Sbjct: 250 PGQKELWIFAIMMLLEYYSMIYLRSRGSIILFPRVILSTYMIYHIYVYLHPNGFHLLALLVMFMFMAWNMIFCVRKFELPAYSSGHVSIDAPRVLHNRVPWPMWSIAIAPDFTLFWPLDHQSMTIYGTAA 379
BLAST of mRNA_H-canaliculatus_F_contig11937.1697.1 vs. uniprot
Match: A0A7R9YBE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBE7_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 5.120e-13 Identity = 37/108 (34.26%), Postives = 57/108 (52.78%), Query Frame = 1
Query: 16 VWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSGFLGMFAVKLYVLQAIELPAYTTGEVSHENPRAHFVELPWPTWGAALPPMWS 339
+WL+ +VM+ EY++++F+R++++I F R + +H+Y Y F GFF +E A +GEVS E PR F LP+P W LPP+WS
Sbjct: 24 LWLFALVMVLEYYSMVFLRSKAAIGFTPRMLMGCLLCYHLYIYSFPAGFFXXXXXXXXXXXXXXXXXSCFRLEKAALLSGEVSFEQPRGAFFRLPYPVWQGDLPPLWS 131 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11937.1697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11937.1697.1 >prot_H-canaliculatus_F_contig11937.1697.1 ID=prot_H-canaliculatus_F_contig11937.1697.1|Name=mRNA_H-canaliculatus_F_contig11937.1697.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=165bp MVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWback to top mRNA from alignment at H-canaliculatus_F_contig11937:3002..3876- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11937.1697.1 ID=mRNA_H-canaliculatus_F_contig11937.1697.1|Name=mRNA_H-canaliculatus_F_contig11937.1697.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=875bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11937:3002..3876- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11937:3002..3876- >mRNA_H-canaliculatus_F_contig11937.1697.1 ID=mRNA_H-canaliculatus_F_contig11937.1697.1|Name=mRNA_H-canaliculatus_F_contig11937.1697.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=990bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11937:3002..3876- (Hapterophycus canaliculatus Oshoro5f female)back to top |