mRNA_H-canaliculatus_F_contig11922.1684.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11922.1684.1
Unique NamemRNA_H-canaliculatus_F_contig11922.1684.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: D7G3Q6_ECTSI (Glutamate dehydrogenase 2 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Q6_ECTSI)

HSP 1 Score: 369 bits (948), Expect = 1.140e-123
Identity = 180/222 (81.08%), Postives = 201/222 (90.54%), Query Frame = 1
Query:    1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALGGGRELARNPLGPGETMDSRLEKKV 666
            QYKRMSLDA PIG GLLWGGAVPHPECAG+GVVYFAEKA+RGRGESLMGKRC++TGSGK VAL+ AEKLLELGA P+TF+DSSGHV+EPEGFD+++FK I KIK+ERGARVGRYIVAS +AKYNEP SVF+APADV FLC T NELT+  A ALVASGCKTVVDGGYRPVS  A+E+LKKNG+FHVPYRGTMIGAA+ GGREL RNPL PGET+D RLEKK+
Sbjct:  272 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGRGESLMGKRCIVTGSGK-VALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLQPGETIDDRLEKKM 492          
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: D8LK56_ECTSI (Glutamate dehydrogenase 1 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK56_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 8.260e-73
Identity = 116/222 (52.25%), Postives = 156/222 (70.27%), Query Frame = 1
Query:    1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALGGGRELARNPLGPGETMDSRLEKKV 666
            QYKR++      G G+LWGGA+P+PE  G+GVV FA   L  +G+SL GKRC+ITGSGK VA++ AEKLL+LGAIP+TFSDSSGH+YEPEG D  + +TIVKIK ERGARVGRYI+ASTTA+Y EP ++F+ P D+ F CS  NE+ +  A  L  +GC  V++G   P +K A  + +K G+   P+  T+ G+ +  G  LA NP+G  E +  R+E+K+
Sbjct:  265 QYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFARCMLEDKGDSLKGKRCLITGSGK-VAVHVAEKLLQLGAIPLTFSDSSGHIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAQYTEPANIFDIPCDLAFACSHRNEVDETAATLLADTGCSAVIEGASAPCTKAAKAVFRKRGLLFAPHVATLAGSGIVSGLALATNPVGAKENIHDRVEEKM 485          
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A836CHL3_9STRA (Glutamate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL3_9STRA)

HSP 1 Score: 227 bits (579), Expect = 8.700e-69
Identity = 110/222 (49.55%), Postives = 156/222 (70.27%), Query Frame = 1
Query:    1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALGGGRELARNPLGPGETMDSRLEKKV 666
            QYKR++      G G+LWGG   +PE  GHGVVYFA + LR +G+SL GKRC++TGSGK +AL  A KLLELGAIP++FSDS+GH+ E +GFD  + +T+V IK ERGAR+GRYI++STTA++N+P  +F+ PADVVF  +  NE+  + A  L  +GC  V++G   P +K A  + +K GV   P+  T+ G  +  G EL+ NPL PG+++D R+E+++
Sbjct:  222 QYKRVNDHVAQKGRGVLWGGIPLYPEGVGHGVVYFANEMLRDKGDSLKGKRCLVTGSGK-LALSIAGKLLELGAIPISFSDSNGHIVETDGFDAAKLRTVVSIKNERGARLGRYIISSTTARFNDPECIFDVPADVVFAAAHRNEIDADRAQRLAENGCLAVIEGANSPCTKAAKAVFRKRGVLFGPHMATLAGNGIVSGFELSSNPLLPGQSIDRRVEEQM 442          
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A6V1RCQ3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RCQ3_HETAK)

HSP 1 Score: 224 bits (571), Expect = 3.150e-67
Identity = 113/218 (51.83%), Postives = 141/218 (64.68%), Query Frame = 1
Query:    1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALGGGRELARNPLGPGETMDSRL 654
            QYKR       +G GLLWGGA P P C G GV +FA++ L  +GESL GKRC+ITGSGK  A   A KLLE GA+P+TFSDSSGH+YEP+G D  +FK + KIK ERGAR+GRYI+ASTTA+YNEP  +F  P D+VFLC   NE+    A  +   G   VV+G   P S  A ++ KK G+   PYR T+ GA+L  G  LA N +     MD ++
Sbjct:  258 QYKRTHNHISHLGRGLLWGGAPPFPHCTGFGVAHFAQQMLEDKGESLKGKRCLITGSGKN-AQAVARKLLEFGAVPLTFSDSSGHIYEPDGLDAVKFKQVAKIKAERGARIGRYIIASTTARYNEPEDLFGIPCDLVFLCGPMNEVGAAAAQQIADGGALGVVEGCNMPCSPEAIKVFKKRGLLFAPYRATLAGASLVNGTALAHNRIASEADMDEQV 474          
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A4D9CY97_9STRA (Glutamate dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY97_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.340e-65
Identity = 111/222 (50.00%), Postives = 152/222 (68.47%), Query Frame = 1
Query:    1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALGGGRELARNPLGPGETMDSRLEKKV 666
            QYKRMS+     G GLLWGG  P P+    GVV++A + L G+G+SL GKRC+ITGSGK +AL+ AEKL+E+GA+P+T SD+SGHVYEP+G D  + KTI+KIK ERGAR+GRYI+ASTTAKYNEP +VF  PAD+VF C+T NE+    A  L   G + V +G + P +  A  I KK G+ H  +  T+   ++  G EL+++     + +D R+++ V
Sbjct:  253 QYKRMSIHHAQKGKGLLWGGVYPFPQATASGVVHWAARVLEGKGDSLEGKRCLITGSGK-MALHVAEKLVEMGAVPLTLSDTSGHVYEPDGIDAAKLKTIMKIKSERGARIGRYIIASTTAKYNEPENVFSVPADLVFPCATHNEIDGVTATMLADMGVQGVFEGSHMPCTNQAISIFKKRGILHGGHVATLAADSIFNGLELSKSSPSMHD-LDGRIKEAV 472          
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A7S2RRL7_9STRA (Glutamate dehydrogenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRL7_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.760e-61
Identity = 105/218 (48.17%), Postives = 137/218 (62.84%), Query Frame = 1
Query:    1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALGGGRELARNPLGPGETMDSRL 654
            QYKR+       G G LWGG VP     GHGV +FAE+ LR + E+L GKR +ITGSG  +AL  AE+LL+ GAIPVTFSDSSGH+YE +G D  +  TI  IK ERGAR+GRYIVASTTAKY++P  +F  P D+   C    E+T   A  L+A+GCK +V+GG  P +  A   L++NG+   PY+ T+   A+  G  L  + +   E +D  L
Sbjct:  197 QYKRIKDIGAKQGSGFLWGGRVPWRFAYGHGVAHFAERMLRDKKETLQGKRVLITGSGN-IALGVAERLLQFGAIPVTFSDSSGHIYEQDGIDASKLATIKHIKSERGARLGRYIVASTTAKYSDPEDIFSIPCDICIPCGPSQEVTDSVAQTLIANGCKAIVEGGSSPCTPDAIVTLRRNGILFAPYKATLSAGAVTSGGALQSSSITTAEDLDRAL 413          
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A7S3ZJ22_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJ22_9STRA)

HSP 1 Score: 199 bits (506), Expect = 9.640e-58
Identity = 105/198 (53.03%), Postives = 134/198 (67.68%), Query Frame = 1
Query:    1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTM-IGAAL 591
            QYKR + +    G G+LWGG+VPHPE  G+G V FA+  L  RG+SL GKRC++TGSGK VAL  A+KL+  GAIP+T SD+SG +YE  G    +   I  IK ERGAR+GRYIVASTTAKYN+P  +F+ P D+VF  ++ NE+  + A  L  +GC T+VD GY P +  A   LKK GV H P+R T+ IG AL
Sbjct:  246 QYKRTATNLSKHGFGMLWGGSVPHPEVHGYGPVSFAKSFLEARGDSLRGKRCLVTGSGK-VALAVADKLVAEGAIPLTLSDTSGFIYEEGGLPSAKLAQISTIKAERGARIGRYIVASTTAKYNDPEDIFDVPCDLVFPTNS-NEIDAQAAEKLANNGCSTIVDAGYSPTTPEAIASLKKLGVAHCPFRATLAIGNAL 441          
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: F0Y860_AURAN (Uncharacterized protein GDH n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y860_AURAN)

HSP 1 Score: 197 bits (502), Expect = 1.480e-57
Identity = 100/192 (52.08%), Postives = 132/192 (68.75%), Query Frame = 1
Query:    1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTM 576
            QYKR +      G G+LWGGA+PHPE  G+  V+FA+  +  RGESL GKRC+ITGSGK VAL  AE+LL LGA+P+TFSD+SGH+YEP+G    +F+ I  IK ERGARVGRYI+ASTTAK+NEP  ++  P D+VF  +   E+  + AA L  +GC  VVD GY P +  A    KK G+ + P++ ++
Sbjct:  203 QYKRTTEHYARHGRGILWGGALPHPEVFGYSAVHFAKHLVESRGESLAGKRCLITGSGK-VALAVAERLLALGAVPLTFSDTSGHIYEPDGIAATKFEQISTIKAERGARVGRYIIASTTAKFNEPEDIYSIPCDIVFP-TIRGEIDADVAARLADNGCAAVVDAGYAPSTPSAIRAYKKLGMAYGPFKASL 392          
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A7S3PXE2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXE2_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.560e-54
Identity = 98/197 (49.75%), Postives = 135/197 (68.53%), Query Frame = 1
Query:    1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAAL 591
            Q+KR+S+ +   G   L   A   PE  G GVV+FA + ++ +G+SL GKRC+I G+GK VA   A KLLE GAIP+TFSDSSGHVYEP G D  + KTI KIK+ERGA +GRY++ASTTA++N+P ++ + P D+ F C+  N++T+E A  L  +GC  VV+GGY  V+     ILKK G+ + P+  TM G+A+
Sbjct:  267 QHKRISIKSSSGGRPFL---AASCPEAPGVGVVHFANEMMKDKGDSLQGKRCLIIGAGK-VARSVAAKLLEFGAIPLTFSDSSGHVYEPNGIDQAKLKTIDKIKDERGALLGRYVIASTTAQFNDPQNILDVPCDLCFPCAAMNDITEEAATKLADNGCMAVVEGGYSTVTPEGRTILKKRGLAYGPHTLTMTGSAI 459          
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Match: A0A835YWP2_9STRA (Glutamate dehydrogenase 1 (NADP-dependent) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWP2_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.610e-54
Identity = 96/198 (48.48%), Postives = 134/198 (67.68%), Query Frame = 1
Query:    1 QYKRMSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVITGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIKEERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAALVASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALG 594
            QYKR++      G G+LWGG   +PE  GHGVVYFA + LR +G+SL GKRC++TGSGK +AL  A KLLELGAIP++FSDS+GH+ E +GFD  + +T+V IK ERGAR+GRYI++STTA++N+P  +F+ PAD VF  +  NE+  + A  L  +GC  V++G   P +K    +L++  + H    G +  A  G
Sbjct:  241 QYKRVNDHVAQKGRGVLWGGIPLYPEGVGHGVVYFANEMLRDKGDSLKGKRCLVTGSGK-LALSIAGKLLELGAIPISFSDSNGHIVETDGFDAAKLRTVVSIKNERGARLGRYIISSTTARFNDPECIFDVPADGVFAAAHRNEIDADRAQRLAENGCLAVIEGANSPCTKA---VLRRTRLLHGVREGKLALAQSG 434          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11922.1684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Q6_ECTSI1.140e-12381.08Glutamate dehydrogenase 2 (NADP-dependent) n=2 Tax... [more]
D8LK56_ECTSI8.260e-7352.25Glutamate dehydrogenase 1 (NADP-dependent) n=2 Tax... [more]
A0A836CHL3_9STRA8.700e-6949.55Glutamate dehydrogenase n=1 Tax=Tribonema minus Ta... [more]
A0A6V1RCQ3_HETAK3.150e-6751.83Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CY97_9STRA2.340e-6550.00Glutamate dehydrogenase n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2RRL7_9STRA3.760e-6148.17Glutamate dehydrogenase n=2 Tax=Rhizochromulina ma... [more]
A0A7S3ZJ22_9STRA9.640e-5853.03Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0Y860_AURAN1.480e-5752.08Uncharacterized protein GDH n=1 Tax=Aureococcus an... [more]
A0A7S3PXE2_9STRA1.560e-5449.75Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A835YWP2_9STRA1.610e-5448.48Glutamate dehydrogenase 1 (NADP-dependent) n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11922contigH-canaliculatus_F_contig11922:309..3175 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score362.1
Seed ortholog evalue1.9e-97
Seed eggNOG ortholog2880.D7G3Q6
KEGG rclassRC00006,RC02799
KEGG koko:K00262
KEGG ReactionR00248
KEGG Pathwayko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100
EggNOG free text desc.glutamate dehydrogenase [NAD(P) ] activity
EggNOG OGsCOG0334@1,KOG2250@2759
EC1.4.1.4
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGlutamate dehydrogenase 2 (NADP-dependent)
Ec32 orthologEc-12_008040.1
Exons5
Model size666
Cds size654
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11922.1684.1prot_H-canaliculatus_F_contig11922.1684.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11922 321..3175 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928895.5948179-UTR-H-canaliculatus_F_contig11922:308..3201622928895.5948179-UTR-H-canaliculatus_F_contig11922:308..320Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11922 309..320 +
1696845604.6953301-UTR-H-canaliculatus_F_contig11922:308..3201696845604.6953301-UTR-H-canaliculatus_F_contig11922:308..320Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11922 309..320 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928895.611775-CDS-H-canaliculatus_F_contig11922:320..4851622928895.611775-CDS-H-canaliculatus_F_contig11922:320..485Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11922 321..485 +
1696845604.7083473-CDS-H-canaliculatus_F_contig11922:320..4851696845604.7083473-CDS-H-canaliculatus_F_contig11922:320..485Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11922 321..485 +
1622928895.6275318-CDS-H-canaliculatus_F_contig11922:1214..13071622928895.6275318-CDS-H-canaliculatus_F_contig11922:1214..1307Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11922 1215..1307 +
1696845604.7174265-CDS-H-canaliculatus_F_contig11922:1214..13071696845604.7174265-CDS-H-canaliculatus_F_contig11922:1214..1307Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11922 1215..1307 +
1622928895.6558673-CDS-H-canaliculatus_F_contig11922:1756..18241622928895.6558673-CDS-H-canaliculatus_F_contig11922:1756..1824Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11922 1757..1824 +
1696845604.7292676-CDS-H-canaliculatus_F_contig11922:1756..18241696845604.7292676-CDS-H-canaliculatus_F_contig11922:1756..1824Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11922 1757..1824 +
1622928895.6744683-CDS-H-canaliculatus_F_contig11922:2271..24611622928895.6744683-CDS-H-canaliculatus_F_contig11922:2271..2461Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11922 2272..2461 +
1696845604.7417395-CDS-H-canaliculatus_F_contig11922:2271..24611696845604.7417395-CDS-H-canaliculatus_F_contig11922:2271..2461Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11922 2272..2461 +
1622928895.6917987-CDS-H-canaliculatus_F_contig11922:3037..31751622928895.6917987-CDS-H-canaliculatus_F_contig11922:3037..3175Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11922 3038..3175 +
1696845604.7515619-CDS-H-canaliculatus_F_contig11922:3037..31751696845604.7515619-CDS-H-canaliculatus_F_contig11922:3037..3175Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11922 3038..3175 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11922.1684.1

>prot_H-canaliculatus_F_contig11922.1684.1 ID=prot_H-canaliculatus_F_contig11922.1684.1|Name=mRNA_H-canaliculatus_F_contig11922.1684.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=218bp
MSLDAPPIGGGLLWGGAVPHPECAGHGVVYFAEKALRGRGESLMGKRCVI
TGSGKKVALYAAEKLLELGAIPVTFSDSSGHVYEPEGFDIDQFKTIVKIK
EERGARVGRYIVASTTAKYNEPPSVFEAPADVVFLCSTPNELTKEGAAAL
VASGCKTVVDGGYRPVSKPASEILKKNGVFHVPYRGTMIGAALGGGRELA
RNPLGPGETMDSRLEKKV
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mRNA from alignment at H-canaliculatus_F_contig11922:309..3175+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11922.1684.1 ID=mRNA_H-canaliculatus_F_contig11922.1684.1|Name=mRNA_H-canaliculatus_F_contig11922.1684.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2867bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11922:309..3175+ (Hapterophycus canaliculatus Oshoro5f female)
CAGTACAAGCGCATGAGCCTCGACGCGCCTCCCATTGGAGGGGGTCTCCT GTGGGGCGGGGCTGTGCCCCACCCGGAGTGCGCGGGCCACGGCGTGGTGT ACTTCGCGGAGAAGGCGCTGCGCGGCCGGGGAGAGTCGCTCATGGGAAAG CGGTGCGTGATCACGGGCAGCGGCAAGGTGAGAGAGAGAGAGAGAGAAAC AGAGACAGAGACAGAGACAGAGAGAGAGAGAGGGAGAGAGAGAGGGAGAG AGAGGGAGCCATGGTGGTTTGGGTTGGGTTGGGTTGGGTTGGCACGGTGT AGGACGCTGTGTGGTCTGGTGAAGGGCTGTCCGGTTTTGTGTATGGTGGG ATGTGATTTTGCAGGGGGTTGCGTGTCTCCATGTATCGAGTGGGGTAGGG TTGCCACGCGTGCGGGGTTCCGGTGCAGTAGCTGCGAAAGAGGCAGAAAG CACAAGTCTCCGCACACCTCGAGGGAGTTGACCATGAAAAGGCTCGGCTA CGAAATATCTATCGTGGCGTTGTCGCTAACGGTCACTTGTGGGCCACTTT CCGCACTAGCTGGCCTGCCTGGTGTCTTCGTGGGCATGCTACCACTCTGC CGCGCAGCGACCGGTCGCGCAGCAACCTATCAAGTCGGCCCGGGACGTTC CTCGAGGTGCCGGGGCCGAAGGATTCCCGCGTAGACTATCCATTTACATA ATCAGCTCAACCGTCCTTCCACACGAGAACAAGAATTCCTGCCCAGAGGC AAATGCGTCTCCCCTGTTGCACATGCTTTCGGTGTGCGGTACATCGTACA CTGTACGATATCGTATGATATCTCGCTGTTGCGTTGCGGCCGCGTACACA TGAAACACGATGCGCACGGATGTTGTCCCTCGTGCTTGGCTTTTTTTTGC GTCGAGAAGGTCGCGTTGTACGCCGCAGAGAAACTTCTGGAGCTGGGGGC GATCCCGGTTACGTTCAGCGACAGCAGCGGCCACGTCTACGAGCCCGAGG TGATGGATGGTGATCGATGGATGCCTGCTGTTGTTGAACCCGAGCCGACT CGCACCAAGTACCCGACGTGTCTTAAATTAATAGTGTAGTTTCCGATCCG AGCGGCTGGAATCTTCTACAGCCGTAAGCGCCAGGCAGCGTGTGCGTTGC TGTCGACCTTGGGATCAGTCCCGACTTCCATCCCTCACGGGGCATCCCAT ACATGGATTGTCTGGCTCGGGAGTGGGGGCTTGACTTGAGGCAATTGGTT TCTGTCAGAGAGAACAACGACAACAACAGCAACAGCAACAACAACAACAA CAACAACAACAACAACAACAACAACAACAGCCATTGTGCCGACAGCATAT CCGCCGTTGCTGACCTTCATACCTTCTCAACCGGACCCACATCTTGCTCA GCTTCGAACCCATATTCCCCCCGTCCCCCGTCCCCGCGGCCGCCGCAGGG TTTCGACATCGACCAGTTCAAGACGATCGTCAAGATCAAGGAGGAGCGAG GGGCGAGGGTGGGAAGGTGAGCATCGCGTTGCTTCCGGCTATGTGGCCGC ATCCAAGTCTCCAGCGGCACGCCGCACACGCCTCTTCTCCTCTGTCAGGC TTGCCCCGAAACACGCGGGCCGCTTGTTCCCTGTAAGGGAAGTGCGCGCC ACGAGCTGCCGCCACTGGGCTGGCGCACCCGCGCGTGCGAGAGAGAAAAA CGAACAAGAGACGCAATCGTCGTTTTTGTCCTGTTGGCCTCGATGTCGTG GGCCCACTCGCCGAACGTGCGCGGTACGCCGGGACATCCTCACCCTCGCG AAGGGGAGGGAGGCACGCCTTCGGCACCGTAGCCACCGTTGGAGAAACAA CCAAGGCGCTGCAAAATGCCTCTCACAAGCGTGCACTCGATTCCTCCGCC TCTTGTCGGGTGCTGTCTCGTCTCCGCCCCCTATTTTTCTGTCGAACGAT CCGGCGTGGCAAGGTACATCGTGGCCTCTACCACGGCCAAGTACAACGAG CCCCCGTCGGTGTTCGAGGCGCCGGCGGACGTGGTCTTCCTCTGCAGCAC ACCCAACGAGCTCACCAAGGAAGGAGCCGCCGCGCTGGTCGCAAGCGGGT GCAAGACCGTGGTGGACGGCGGATACCGTCCGGTGTCCAAGCCCGCTTCT GAGGTAACTTGGGGGTGCCGTGCGTCGAGGGAAACACGTATAGTAGGGAA GAAGGGGGTTGATTGAGGGGGGGTGGAAACTCGGTATGCGCGCCCGGAAA TGAGGCCACGATACTGCAGTAGACCCCGGGGACGGGGAGCAGTGAGACTG CGTAGGCGTTGGGCATATTTCGCGTACGGCAGCTGTTTTCAGGGGGGTCC CTGCTGTGGAAGAATGGAGTGACAGGGTGCACCTGGGTTGCTGGTGTGTG GAGTGCAGGAGGCCGCTGTGACGTTTTTTAAAATTACTAACAACGAAGTT AACTCGCAGCAGCAGCAGCAACGCCGCTACACCCACCCCCGCCTCCCCCA CGATCGCCAACACCAAGGAGTAGAAACAGCGCCGGATTGGTGTCTTGCAA GAAAACATGCGTTTTCTAGCGCCACGCCGGGCACGGACGGATCTGTGCGA CCTTCGAGAGAAATTCCTGAAAAGGGCAAACGACACAGCCTCGACCATTC CCCGTGGCCGCCTGCTCTCCGCCCCGGTTGCCTCTTCCGCTCACGAACTG GTTTCTTTGATGCTGTAACTGCACGATAGATCCTGAAGAAGAACGGGGTG TTCCACGTGCCGTACCGCGGGACTATGATCGGGGCGGCGCTCGGGGGCGG GAGGGAGCTAGCCCGCAATCCGCTGGGACCGGGAGAGACCATGGACAGCC GCCTCGAAAAGAAGGTA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11922:309..3175+

>mRNA_H-canaliculatus_F_contig11922.1684.1 ID=mRNA_H-canaliculatus_F_contig11922.1684.1|Name=mRNA_H-canaliculatus_F_contig11922.1684.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1308bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11922:309..3175+ (Hapterophycus canaliculatus Oshoro5f female)
ATGAGCCTCGACGCGCCTCCCATTGGAGGGGGTCTCCTGTGGGGCGGGGC
TGTGCCCCACCCGGAGTGCGCGGGCCACGGCGTGGTGTACTTCGCGGAGA
AGGCGCTGCGCGGCCGGGGAGAGTCGCTCATGGGAAAGCGGTGCGTGATC
ACGGGCAGCGGCAAGATGAGCCTCGACGCGCCTCCCATTGGAGGGGGTCT
CCTGTGGGGCGGGGCTGTGCCCCACCCGGAGTGCGCGGGCCACGGCGTGG
TGTACTTCGCGGAGAAGGCGCTGCGCGGCCGGGGAGAGTCGCTCATGGGA
AAGCGGTGCGTGATCACGGGCAGCGGCAAGAAGGTCGCGTTGTACGCCGC
AGAGAAACTTCTGGAGCTGGGGGCGATCCCGGTTACGTTCAGCGACAGCA
GCGGCCACGTCTACGAGCCCGAGAAGGTCGCGTTGTACGCCGCAGAGAAA
CTTCTGGAGCTGGGGGCGATCCCGGTTACGTTCAGCGACAGCAGCGGCCA
CGTCTACGAGCCCGAGGGTTTCGACATCGACCAGTTCAAGACGATCGTCA
AGATCAAGGAGGAGCGAGGGGCGAGGGTGGGAAGGGTTTCGACATCGACC
AGTTCAAGACGATCGTCAAGATCAAGGAGGAGCGAGGGGCGAGGGTGGGA
AGGTACATCGTGGCCTCTACCACGGCCAAGTACAACGAGCCCCCGTCGGT
GTTCGAGGCGCCGGCGGACGTGGTCTTCCTCTGCAGCACACCCAACGAGC
TCACCAAGGAAGGAGCCGCCGCGCTGGTCGCAAGCGGGTGCAAGACCGTG
GTGGACGGCGGATACCGTCCGGTGTCCAAGCCCGCTTCTGAGGTACATCG
TGGCCTCTACCACGGCCAAGTACAACGAGCCCCCGTCGGTGTTCGAGGCG
CCGGCGGACGTGGTCTTCCTCTGCAGCACACCCAACGAGCTCACCAAGGA
AGGAGCCGCCGCGCTGGTCGCAAGCGGGTGCAAGACCGTGGTGGACGGCG
GATACCGTCCGGTGTCCAAGCCCGCTTCTGAGATCCTGAAGAAGAACGGG
GTGTTCCACGTGCCGTACCGCGGGACTATGATCGGGGCGGCGCTCGGGGG
CGGGAGGGAGCTAGCCCGCAATCCGCTGGGACCGGGAGAGACCATGGACA
GCCGCCTCGAAAAGAAGGTAATCCTGAAGAAGAACGGGGTGTTCCACGTG
CCGTACCGCGGGACTATGATCGGGGCGGCGCTCGGGGGCGGGAGGGAGCT
AGCCCGCAATCCGCTGGGACCGGGAGAGACCATGGACAGCCGCCTCGAAA
AGAAGGTA
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