mRNA_H-canaliculatus_F_contig11921.1683.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11921.1683.1 vs. uniprot
Match: A0A482SM29_9ARCH (CoA pyrophosphatase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SM29_9ARCH) HSP 1 Score: 144 bits (362), Expect = 2.060e-38 Identity = 73/110 (66.36%), Postives = 91/110 (82.73%), Query Frame = 3
Query: 210 RRAAVLVPLCNRDGIASLLYTVRSSKVSTHKGQVSFPGGHLEPGEGAIEAALRETREEIGEGLGDIEVLGTCQTLPAVTGTPVTPVLAFVQQDVGPLLPNLTLSPDEASV 539
R+AAVL+PLCNR G AS+++TVR+ VSTHKGQVSFPGGH++P E AIEAA+RETREE+G+G+G I+VLG QT+PA+TGT VTPVLA+V+ DV L +LT SP E V
Sbjct: 40 RKAAVLIPLCNRHGQASIMFTVRTQNVSTHKGQVSFPGGHIDPNETAIEAAIRETREELGDGIGIIQVLGVAQTVPAITGTLVTPVLAYVETDVQDLQ-HLTPSPSEVDV 148
BLAST of mRNA_H-canaliculatus_F_contig11921.1683.1 vs. uniprot
Match: A0A836CD75_9STRA (NUDIX hydrolase domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD75_9STRA) HSP 1 Score: 134 bits (338), Expect = 9.160e-35 Identity = 67/110 (60.91%), Postives = 88/110 (80.00%), Query Frame = 3
Query: 207 ARRAAVLVPLCNRDGIASLLYTVRSSKVSTHKGQVSFPGGHLEPGEGAIEAALRETREEIGEGLGDIEVLGTCQTLPAVTGTPVTPVLAFVQQDVGPLLPNLTLSPDEAS 536
ARRAAVLVPLCN G+ S+L+TVR++ V THKGQV+FPGGH++ GEG ++AALRET EE+GEG+G + ++G CQT+PAVTGT VTPV+ +V++DV L L PDE +
Sbjct: 34 ARRAAVLVPLCNDMGVPSILFTVRTATVPTHKGQVAFPGGHIKAGEGPVDAALRETVEEVGEGIGAVHIVGHCQTVPAVTGTRVTPVVGWVERDVDGCR-RLELCPDEVA 142
BLAST of mRNA_H-canaliculatus_F_contig11921.1683.1 vs. uniprot
Match: A0A7S3H581_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H581_9STRA) HSP 1 Score: 128 bits (321), Expect = 3.500e-32 Identity = 61/95 (64.21%), Postives = 76/95 (80.00%), Query Frame = 3
Query: 210 RRAAVLVPLCNRDGIASLLYTVRSSKVSTHKGQVSFPGGHLEPGEGAIEAALRETREEIGEGLGDIEVLGTCQTLPAVTGTPVTPVLAFVQQDVG 494
++A+V +PLCNR G+AS+L+TVRS V THKGQVSFPGGHLEPGE I AA RET EE+G +G++ +G CQTLPA T TPV PV+ F++QDVG
Sbjct: 40 KQASVFIPLCNRHGVASVLFTVRSQHVGTHKGQVSFPGGHLEPGESEIAAAHRETFEELGFTIGNLHTIGNCQTLPAKTLTPVHPVIGFIEQDVG 134
BLAST of mRNA_H-canaliculatus_F_contig11921.1683.1 vs. uniprot
Match: A0A7S2RJD6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJD6_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.970e-29 Identity = 70/134 (52.24%), Postives = 88/134 (65.67%), Query Frame = 3
Query: 198 ARAARRAAVLVPLCNRDGIASLLYTVRSSKVSTHKGQVSFPGGHLEPGEGAIEAALRETREEIGEGLGDIEVLGTCQTLPAVTGTPVTPVLAFVQQDVGPLLPN-LTLSPDEA------SVRVLQAPSIRAKRN 578
ARA RRAAVLVPLC G +L+TVRS+ VSTHKGQVSFPGGH++ E A AALRE EE+G LG ++++ C +PA+TGT VTP++ FV D+GP N L L DE S L P++R KR+
Sbjct: 82 ARADRRAAVLVPLCTSCGEPGVLFTVRSNAVSTHKGQVSFPGGHMDSHESAPVAALREAWEELGTSLGPVDLIARCSPVPAITGTMVTPIIGFVADDIGPTPHNQLQLCRDEVDRAFFLSFDQLHDPNLRLKRH 215
BLAST of mRNA_H-canaliculatus_F_contig11921.1683.1 vs. uniprot
Match: A0A0G4EFA4_VITBC (Nudix hydrolase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EFA4_VITBC) HSP 1 Score: 122 bits (307), Expect = 7.890e-28 Identity = 61/98 (62.24%), Postives = 80/98 (81.63%), Query Frame = 3
Query: 210 RRAAVLVPLCNRDGIASLLYTVRSSKVSTHKGQVSFPGGHLEPGEGAIEAALRETREEIGEGLGDIEVLGTCQTLPAVTGTPVTPVLAFVQQDVGPLL 503
R+AAVL+PLCNR+G+AS+L T+RS K+S H GQVSFPGGH+E GE I+AALRET EE+G +GDI ++GTC+ + AVTGT V PV+ +++DVG LL
Sbjct: 299 RQAAVLIPLCNRNGVASVLLTLRSDKIS-HPGQVSFPGGHIERGETPIDAALRETHEELGSRIGDITIIGTCEQVVAVTGTIVHPVIGLLRRDVGELL 395
BLAST of mRNA_H-canaliculatus_F_contig11921.1683.1 vs. uniprot
Match: A0A0G4FNC8_9ALVE (Nudix hydrolase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FNC8_9ALVE) HSP 1 Score: 117 bits (292), Expect = 3.490e-26 Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 3
Query: 210 RRAAVLVPLCNRDGIASLLYTVRSSKVSTHKGQVSFPGGHLEPGEGAIEAALRETREEIGEG-LGDIEVLGTCQTLPAVTGTPVTPVLAFVQQDVGPL 500
R+AAVLVPLCNR+G AS+L+TVRSSKV THK QVSFPGGHLEPGE +AALRET EE+G G L +E++G C + AVTGT V P L + +D+G L
Sbjct: 70 RQAAVLVPLCNRNGEASVLFTVRSSKVRTHKRQVSFPGGHLEPGESGKDAALRETGEELGTGFLKGMEIVGRCDEVEAVTGTIVHPYLGVMCEDLGDL 167
BLAST of mRNA_H-canaliculatus_F_contig11921.1683.1 vs. uniprot
Match: A0A7R9U5Y6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5Y6_9STRA) HSP 1 Score: 107 bits (267), Expect = 4.210e-24 Identity = 60/113 (53.10%), Postives = 75/113 (66.37%), Query Frame = 3
Query: 192 ERARAARRAAVLVPLCNRDGIASLLYTVRSSKVSTHKGQVSFPGGHLEPGEGAIEAALRETREEIGEGLGDIEVLGTCQTLPAVTGTPVTPVLAFVQQDVGPLLPNLTLSPDE 530
E + R AAVL+PLC + I S+L+T R+ VSTHKGQVSFPGGH+E E ALRET EE+G I LG C+T+PAVTGT VTPV+ ++ D+ + LTLS DE
Sbjct: 48 ESGKTPREAAVLIPLCTNERIPSVLFTKRTDLVSTHKGQVSFPGGHVEADESYERCALRETYEELGISPEHITTLGFCETIPAVTGTMVTPVIGLLKPDLTDV--PLTLSEDE 158
BLAST of mRNA_H-canaliculatus_F_contig11921.1683.1 vs. uniprot
Match: A0A4D9D8V8_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8V8_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.220e-22 Identity = 73/169 (43.20%), Postives = 92/169 (54.44%), Query Frame = 3
Query: 120 PLPLTPAR-TPAAAADSGSKPLSESERARAARRAAVLVPLCNRDGIASLLYTVRSSKVSTHKGQVSFPGGHLEPGEGAIEAALRETREEI------GEG----------------------LGDIEVLGTCQTLPAVTGTPVTPVLAFVQQDVGPLLPNLTLSPDEASV 539
P+PL P T + + + S P + S A A R AAVL+PLC G ASLLY +R++ VSTHKGQVSFPGGH+ P E +AALRE EE+ G+G +G I +L C+ LPAVTGT V P LA + +DVG L SPD + V
Sbjct: 32 PIPLLPTSLTRPSPSHASSTPSAAS--ASAPRTAAVLIPLCTAHGQASLLYQIRTASVSTHKGQVSFPGGHILPNEAPAQAALREFYEEMAGDPRGGQGVPQSSTPSDRSHSKADGAAAPRIGPISILAACEPLPAVTGTVVHPFLALLHRDVGDLA---HFSPDPSEV 195
BLAST of mRNA_H-canaliculatus_F_contig11921.1683.1 vs. uniprot
Match: A0A7S1U5N8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5N8_9STRA) HSP 1 Score: 102 bits (255), Expect = 5.410e-22 Identity = 67/148 (45.27%), Postives = 81/148 (54.73%), Query Frame = 3
Query: 186 ESERARAARRAAVLVPLCNRDGIASLLYTVRSSKVSTHKGQV---------------------------------SFPGGHLEPGEGAIEAALRETREEIGEGLGDIEVLGTCQTLPAVTGTPVTPVLAFVQQDVGPLLPNLTLSPDE 530
+ ERAR RRAAVL+PLC G+ S+L+T R+ VSTHKGQV SFPGGH+EPGE A+RE EE+G EVLG C+T+PAVTGT VTPV+A +Q D+ L P TLS E
Sbjct: 50 DKERARPRRRAAVLLPLCTDGGVPSVLFTKRTELVSTHKGQVRFGGTPSALERQSRPPLQRQPHSRPRSAQKPKVSFPGGHIEPGETHRACAVREMFEEVGIDKACAEVLGYCETVPAVTGTLVTPVVAVLQPDLAELRP-FTLSDGE 196
BLAST of mRNA_H-canaliculatus_F_contig11921.1683.1 vs. uniprot
Match: A0A6B3ULJ0_9CAUL (CoA pyrophosphatase n=3 Tax=unclassified Caulobacter TaxID=2648921 RepID=A0A6B3ULJ0_9CAUL) HSP 1 Score: 94.0 bits (232), Expect = 3.180e-19 Identity = 58/126 (46.03%), Postives = 71/126 (56.35%), Query Frame = 3
Query: 162 DSGSKPLSESERARAARRAAVLVPLCNRDGIASLLYTVRSSKVSTHKGQVSFPGGHLEPGEGAIEAALRETREEIGEGLGDIEVLGTCQTLPAVTGTPVTPVLAFVQQDVGPLLPNLTLSPDEASV 539
D P ER R R AAVLVPL R ++ T RS +S+H GQ++FPGG L+PGEG +EAALRE EEIG G +E +G VTG VTPV+AFV+ P L P+ A V
Sbjct: 30 DFDLNPELRGERKRLLRDAAVLVPLVERPDGLQVILTRRSDTLSSHTGQIAFPGGRLDPGEGPVEAALREAEEEIGLDRGFVEPVGLSARYETVTGYIVTPVVAFVR-------PGFELKPNPAEV 148 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11921.1683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11921.1683.1 >prot_H-canaliculatus_F_contig11921.1683.1 ID=prot_H-canaliculatus_F_contig11921.1683.1|Name=mRNA_H-canaliculatus_F_contig11921.1683.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=201bp MHTPARAPLVFSEQNLAAIRKVLAPGPLPLTPARTPAAAADSGSKPLSESback to top mRNA from alignment at H-canaliculatus_F_contig11921:1502..3945+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11921.1683.1 ID=mRNA_H-canaliculatus_F_contig11921.1683.1|Name=mRNA_H-canaliculatus_F_contig11921.1683.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2444bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11921:1502..3945+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11921:1502..3945+ >mRNA_H-canaliculatus_F_contig11921.1683.1 ID=mRNA_H-canaliculatus_F_contig11921.1683.1|Name=mRNA_H-canaliculatus_F_contig11921.1683.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1206bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11921:1502..3945+ (Hapterophycus canaliculatus Oshoro5f female)back to top |