mRNA_H-canaliculatus_F_contig1190.1669.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1190.1669.1
Unique NamemRNA_H-canaliculatus_F_contig1190.1669.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1190.1669.1 vs. uniprot
Match: D8LJF7_ECTSI (Photosystem II oxygen evolution complex protein PsbP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF7_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 9.480e-122
Identity = 191/232 (82.33%), Postives = 204/232 (87.93%), Query Frame = 2 
Query:   32 MLRAVTFAVALGLANGFITRTAVRVVANPTSERSVVRMSAEGALDRAQFLTASAAVAASVAVLPFAAAADEEQIETTQVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGTVSQVGAKLSKGRDMELVSARDRITEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWRKEEEPFRAIVDSFLPRL 727
            MLR VTFA  +G +NGF+   AVR  +NPT ER  VRMSAEG  DRAQFLT SAAVAAS  +LP  A ADE +  + QVKLVTTKLGG+LEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLG+ +QVG KLSKGRDMELVSARDR+TEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAW K+EEPF+ IVDSFLPRL
Sbjct:    1 MLRVVTFAAVVGCSNGFVAPNAVRAGSNPTLERHTVRMSAEGPSDRAQFLTTSAAVAASAVMLPLVAVADEGETGSKQVKLVTTKLGGKLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGSATQVGEKLSKGRDMELVSARDRVTEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWEKQEEPFKTIVDSFLPRL 232
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BLAST of mRNA_H-canaliculatus_F_contig1190.1669.1 vs. uniprot
Match: A0A6V2XVF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XVF7_HETAK)

HSP 1 Score: 170 bits (431), Expect = 4.890e-45
Identity = 94/223 (42.15%), Postives = 138/223 (61.88%), Query Frame = 2 
Query:   62 LGLANGFITRTAVRVVANPTSERSVVRMSAEGALDRAQFLTASAAVAASVAVLPFAAAADEEQIETTQVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGTVSQVGAKLSKGRDMELVSARDRITEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCP-EKAWRKEEEPFRAIVDSFLPRL 727
            +G  N F+    V   ++  + +  + M+AEGA+ R + L A+ A  A+ A +P  A A+ EQ+E       T+++GG ++P+ DV+KG++L +P GW+ +    GEY VK VDLV+    I ++ +PVKS T +  LG V  VGAKL+  R  EL+SA D+ITE IR Y FEFK G   E+  LS+NK +LW+L+   P EK+W K +E +R +  SFLPRL
Sbjct:   15 VGSLNAFV----VPARSSGVASKMQLAMTAEGAMGRREVLAAATAAVAT-ATVPIVAFAEPEQVERA-----TSRMGGTMDPYNDVNKGFKLMRPGGWDAFSNAPGEYDVKFVDLVNKAETITVSTTPVKSSTSIDALGEVGAVGAKLAASRGAELLSANDKITENIRAYTFEFKKGSSYEIYQLSINKGRLWSLSCVAPSEKSWAKRKEAYRVVAGSFLPRL 227
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BLAST of mRNA_H-canaliculatus_F_contig1190.1669.1 vs. uniprot
Match: A0A7S4BPW2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BPW2_CHRCT)

HSP 1 Score: 136 bits (342), Expect = 8.870e-33
Identity = 67/166 (40.36%), Postives = 104/166 (62.65%), Query Frame = 2 
Query:  227 AAAADEEQIETTQVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGTVSQVGAKLSKGRDMELVSARDRITEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWRKEEEPFRAIVDSFLPR 724
            AAA     +++   +   +++GG LEPF DV KGY+L KP+ WN++D   G Y VK  D+++P  ++ +++SPV + T +S LG VS VG K +K R+ EL+SA++R  +G  +Y FE KG    E   L+VN+ KL+ ++     K W K EE F+ I+ SF+P+
Sbjct:   56 AAALVSLDVQSVSAEDTFSRMGGALEPFIDVQKGYKLYKPVAWNQFDADPGVYDVKFQDVIEPFEIVQVSSSPVTTATSVSALGDVSAVGVKFAKSRNAELISAKERDADGSLVYTFELKGEMYHEYLALAVNRGKLFRVSTVTSNKRWPKREELFKNIILSFVPK 221
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BLAST of mRNA_H-canaliculatus_F_contig1190.1669.1 vs. uniprot
Match: A0A7R9Y8Q4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q4_9STRA)

HSP 1 Score: 133 bits (335), Expect = 7.930e-32
Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 2 
Query:  263 QVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGTVSQVGAKLSKGRDMELVSARDRITEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWRKEEEPFRAIVDSFLPR 724
            +V L  ++LGG LEP++D+ +G+RL  P  WN+++   G Y V+ VDLV+    +LL  SPVKSD  L  +GT  ++G KL+  R+ + VSA  R TEG+  YDFEF+     E  TL++ +N+LWNL++    K W K +  F  I  SF+P+
Sbjct:   70 EVPLSKSRLGGVLEPYSDIQRGFRLMAPYSWNKFENGEG-YDVRWVDLVNVKENVLLRTSPVKSDASLEAIGTPEKIGEKLAASREAQCVSATARQTEGLLFYDFEFESKAAHEYATLAIARNRLWNLSVVTEPKNWSKRKASFDGIRKSFIPK 222
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BLAST of mRNA_H-canaliculatus_F_contig1190.1669.1 vs. uniprot
Match: A0A7S4JXM0_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JXM0_9EUKA)

HSP 1 Score: 132 bits (333), Expect = 1.290e-31
Identity = 75/194 (38.66%), Postives = 110/194 (56.70%), Query Frame = 2 
Query:  140 RMSAEGALDRAQFLTASAAVAASVAVLPFAAAADEEQIETTQVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGTVSQVGAKLSKGRDMELVSARDRITEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWRKEEEPFRAIVDSFLP 721
            R  A  A+ R   + A  A  A++  L  +A+A+EE           ++LGG LEPF D+ KGY+L KP GW +Y    G Y VK  D+++P   +++++SPV + T +S LG +  VGAK +K R+ ELV A +R  +G  +Y  E KG    EL TLS+N+ KL+ +T     K W K  E +  I+ SF+P
Sbjct:   32 RAHASAAMTRRHLVQAGGAAVAALG-LASSASAEEETF---------SRLGGLLEPFVDIQKGYKLYKPSGWTQYSIDPGVYDVKFADIIEPFESVIVSSSPVATATSISALGDLPTVGAKFAKSRNAELVKATERTADGNLVYTLELKGDVYHELLTLSINRGKLFRVTATATNKRWSKRSELYSNIMLSFVP 215
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BLAST of mRNA_H-canaliculatus_F_contig1190.1669.1 vs. uniprot
Match: A0A7S0W0N6_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W0N6_9CRYP)

HSP 1 Score: 131 bits (329), Expect = 3.860e-30
Identity = 66/164 (40.24%), Postives = 100/164 (60.98%), Query Frame = 2 
Query:  248 QIETTQVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGTVSQVGAKLSKGRDMELVSARDRITEGIRLYDFEFKGG----GRRELKTLSVNKNKLWNLTLGCPEKAWRKEEEPFRAIVDSFLPRL 727
            Q E+T  K   +++GG LEPF D++KG++L KP GWN++D   GEY +K  DLV+ + ++++    V++   +  LG V  +G KL+  +  ELVSA  R  +GI  Y F FK G    G RE+  L VNK +LW++T    EK W K E+ +  ++ SF+P+L
Sbjct:  141 QGESTDPKTKASRMGGLLEPFKDINKGFQLLKPRGWNQFDAAPGEYDIKWEDLVEKSEMVMVGTKEVQTAKSVDALGDVEALGKKLAAKKKAELVSAEKREVDGILFYKFIFKQGNEKVGAREVYQLCVNKGRLWSVTATTSEKRWAKREKFYDNVMMSFVPKL 304
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BLAST of mRNA_H-canaliculatus_F_contig1190.1669.1 vs. uniprot
Match: B7G6V4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G6V4_PHATC)

HSP 1 Score: 128 bits (322), Expect = 4.000e-30
Identity = 67/154 (43.51%), Postives = 100/154 (64.94%), Query Frame = 2 
Query:  275 VTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTE-LSTLGT-VSQVGAKLSKGRDMELVSARDRITEGIRLYDFEFK-GGGRRELKTLSVNKNKLWNLTLGCPEKAWRKEEEPFRAIVDSFLPRL 727
            V T++GG LE F D  +G+R+  P GWN+++G  G Y VK  DLVDP+  + ++++PVKS TE ++ LG  V  +G KL++ R+ +L+SA +R+TEGI  Y+F+F    G  +L  L V K +LW+L     EK W K EE +  ++ SF+PRL
Sbjct:   64 VATRMGGLLEAFQDGPRGFRIMIPSGWNKFEGEVGAYDVKWQDLVDPSENVKISSTPVKSTTESVAALGDDVQALGLKLAEKRNAKLISASERLTEGILFYNFDFAIKDGTHQLLQLCVGKGRLWSLDANSKEKRWDKREEMYSNVLASFIPRL 217
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BLAST of mRNA_H-canaliculatus_F_contig1190.1669.1 vs. uniprot
Match: A0A7S0NW19_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NW19_9EUKA)

HSP 1 Score: 126 bits (316), Expect = 2.800e-29
Identity = 70/190 (36.84%), Postives = 106/190 (55.79%), Query Frame = 2 
Query:  155 GALDRAQFLTASAAVAASVAVLPFAAAADEEQIETTQVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGTVSQVGAKLSKGRDMELVSARDRITEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWRKEEEPFRAIVDSFLPR 724
            G + R Q L A+AA          AA+ADE             K+GG LEP+ DV KGY+L +P  WN++D   G Y VK  D+++    + +++SPV S T +S LG ++ V AK +K R+ ELVS+ +R  +G  LY  E +G    E   L++N+ KL+ L+     K W K +E ++ +V SF+P+
Sbjct:   40 GGISRRQQLAAAAATGVLSVFGTHAASADE----------TFNKMGGALEPYIDVQKGYKLYRPTAWNQFDTDPGVYDVKFQDVINSFETVQVSSSPVSSATSISALGDIASVAAKFAKSRNAELVSSSERDADGSLLYSMELQGDMYHEYLALTINRGKLFRLSTVTSNKRWSKRQELYKNVVLSFVPK 219
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BLAST of mRNA_H-canaliculatus_F_contig1190.1669.1 vs. uniprot
Match: A0A7S2FXS9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXS9_9STRA)

HSP 1 Score: 120 bits (300), Expect = 9.950e-28
Identity = 69/151 (45.70%), Postives = 92/151 (60.93%), Query Frame = 2 
Query:  281 TKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILL-TNSPVKSDT-ELSTLGTVSQVGAKLSKGRDMELVSARDRITEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWRKEEEPFRAIVDSFLPRL 727
            TK+GG LEP+ DV KG+R+ KP GWN++D   G Y +K  DLV     +LL T +PVKS T  +  LG V++VG KL KG+  EL+SA+    EGI  Y +EFK     +L  L VNK KLW++    P+K W K  E +   + SF+P L
Sbjct:   16 TKMGGLLEPYNDVGKGWRINKPSGWNQFDTLPGVYEMKWEDLVATNREVLLVTTTPVKSTTTSVDMLGDVTEVGRKLGKGKK-ELLSAKAVEKEGILFYMWEFKTEDGHQLLQLCVNKGKLWSVDASAPDKRWSKVSELYTNSLLSFMPTL 165
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BLAST of mRNA_H-canaliculatus_F_contig1190.1669.1 vs. uniprot
Match: A0A8J6C9Q6_DIALT (PsbP domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C9Q6_DIALT)

HSP 1 Score: 121 bits (303), Expect = 2.000e-27
Identity = 69/190 (36.32%), Postives = 108/190 (56.84%), Query Frame = 2 
Query:  158 ALDRAQFLTASAAVAASVAVLPFAAAADEEQIETTQVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGTVSQVGAKLSKGRDMELVSARDRITEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWRKEEEPFRAIVDSFLPRL 727
            A+D ++    SAA+A+  A LP  A          ++   TT++GG L+ F+D+SKG+ + KP  WN++DGT GEY  K  DL+  T  I++++SPV S   +  LG+ S++GAK++K RD+ LVSA       + +Y  E  G G  E    +V+K KLW +T    +K W   +E +  ++ SF  R+
Sbjct:   42 AVDLSRRRAVSAALAS--AALPLVALPALAADGVREISPSTTRMGGLLDAFSDISKGFSVYKPSTWNKFDGTPGEYEAKWQDLIGYTEQIIVSSSPVTSGKGIDALGSASELGAKVAKLRDLTLVSAEAVKVGELLMYIVELAGQGGHEAIGFTVSKGKLWRITTKASDKKWAANKEMYMNVITSFQNRI 229
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1190.1669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LJF7_ECTSI9.480e-12282.33Photosystem II oxygen evolution complex protein Ps... [more]
A0A6V2XVF7_HETAK4.890e-4542.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4BPW2_CHRCT8.870e-3340.36Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7R9Y8Q4_9STRA7.930e-3242.21Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4JXM0_9EUKA1.290e-3138.66Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S0W0N6_9CRYP3.860e-3040.24Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
B7G6V4_PHATC4.000e-3043.51Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S0NW19_9EUKA2.800e-2936.84Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S2FXS9_9STRA9.950e-2845.70Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J6C9Q6_DIALT2.000e-2736.32PsbP domain-containing protein n=1 Tax=Diacronema ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1190contigH-canaliculatus_F_contig1190:7273..12868 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score371.3
Seed ortholog evalue3.3e-100
Seed eggNOG ortholog2880.D8LJF7
Preferred namePSBP3
KEGG koko:K02717
KEGG Pathwayko00195,ko01100,map00195,map01100
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0009579,GO:0031977,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044436,GO:0044444,GO:0044464
EggNOG free text desc.photosynthesis
EggNOG OGs2QU2U@2759,COG0459@1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionPhotosystem II oxygen evolution complex protein PsbP
Ec32 orthologEc-06_010000.1
Exons5
Model size2128
Cds size699
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928893.7495837-UTR-H-canaliculatus_F_contig1190:7272..86701622928893.7495837-UTR-H-canaliculatus_F_contig1190:7272..8670Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1190 7273..8670 -
1696845603.9121182-UTR-H-canaliculatus_F_contig1190:7272..86701696845603.9121182-UTR-H-canaliculatus_F_contig1190:7272..8670Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1190 7273..8670 -
1622928893.8618858-UTR-H-canaliculatus_F_contig1190:12837..128681622928893.8618858-UTR-H-canaliculatus_F_contig1190:12837..12868Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1190 12838..12868 -
1696845603.9688628-UTR-H-canaliculatus_F_contig1190:12837..128681696845603.9688628-UTR-H-canaliculatus_F_contig1190:12837..12868Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1190 12838..12868 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928893.7724187-CDS-H-canaliculatus_F_contig1190:8670..88291622928893.7724187-CDS-H-canaliculatus_F_contig1190:8670..8829Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 8671..8829 -
1696845603.924971-CDS-H-canaliculatus_F_contig1190:8670..88291696845603.924971-CDS-H-canaliculatus_F_contig1190:8670..8829Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 8671..8829 -
1622928893.7875383-CDS-H-canaliculatus_F_contig1190:9755..98631622928893.7875383-CDS-H-canaliculatus_F_contig1190:9755..9863Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 9756..9863 -
1696845603.9341004-CDS-H-canaliculatus_F_contig1190:9755..98631696845603.9341004-CDS-H-canaliculatus_F_contig1190:9755..9863Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 9756..9863 -
1622928893.8039076-CDS-H-canaliculatus_F_contig1190:10308..105211622928893.8039076-CDS-H-canaliculatus_F_contig1190:10308..10521Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 10309..10521 -
1696845603.9428568-CDS-H-canaliculatus_F_contig1190:10308..105211696845603.9428568-CDS-H-canaliculatus_F_contig1190:10308..10521Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 10309..10521 -
1622928893.8162308-CDS-H-canaliculatus_F_contig1190:11495..116181622928893.8162308-CDS-H-canaliculatus_F_contig1190:11495..11618Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 11496..11618 -
1696845603.9514813-CDS-H-canaliculatus_F_contig1190:11495..116181696845603.9514813-CDS-H-canaliculatus_F_contig1190:11495..11618Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 11496..11618 -
1622928893.8319895-CDS-H-canaliculatus_F_contig1190:12741..128371622928893.8319895-CDS-H-canaliculatus_F_contig1190:12741..12837Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 12742..12837 -
1696845603.9601345-CDS-H-canaliculatus_F_contig1190:12741..128371696845603.9601345-CDS-H-canaliculatus_F_contig1190:12741..12837Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1190 12742..12837 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1190.1669.1prot_H-canaliculatus_F_contig1190.1669.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1190 8671..12837 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1190.1669.1

>prot_H-canaliculatus_F_contig1190.1669.1 ID=prot_H-canaliculatus_F_contig1190.1669.1|Name=mRNA_H-canaliculatus_F_contig1190.1669.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=233bp
MLRAVTFAVALGLANGFITRTAVRVVANPTSERSVVRMSAEGALDRAQFL
TASAAVAASVAVLPFAAAADEEQIETTQVKLVTTKLGGQLEPFADVSKGY
RLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGT
VSQVGAKLSKGRDMELVSARDRITEGIRLYDFEFKGGGRRELKTLSVNKN
KLWNLTLGCPEKAWRKEEEPFRAIVDSFLPRL*
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mRNA from alignment at H-canaliculatus_F_contig1190:7273..12868-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1190.1669.1 ID=mRNA_H-canaliculatus_F_contig1190.1669.1|Name=mRNA_H-canaliculatus_F_contig1190.1669.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5596bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1190:7273..12868- (Hapterophycus canaliculatus Oshoro5f female)
TGTGTCTTGCCTTGTGTCCAAAGCTTCTGCCATGCTTCGCGCCGTAACGT
TTGCTGTTGCACTCGGTCTTGCCAATGGCTTCATCACGCGAACCGCTGTT
CGAGTTGTGGCCAACCCGACGTCTGAGGTATGACCGATGACAAACATGTT
CCTCTCTTCCCCAGACTCACGCACGCACGGACGCCGTTGCGGTGTCATGT
TTCGACATTTACATTTCGTAGGGACAGCAGCACTAGAGACGGCCCTCACA
GGATTTGCTACTCAGAGTCATGTTCATGAACAGGGTCTAGAGAAGGATTG
CATGTACGCCGGATGATGCATTTGGCGGTTGCCGATGGGAGTGACTCTGA
AAACGTGAAAATCCAAGTCAAGCACTCGGAGGCGTCCTCTTCCTTTTGAG
AAGAGAAAGACTTCAGCTCCTCCCTCGTTGCCTCGCTCCACATATGCTGA
TTCACGGCGGCCGTTTCGAGAAGAGATCCCCGTTTTGCATACTTCATAGG
TTTCCTGCCCAAGTGTGAATCTTGCCGCGTGCTTCTCGTGTTCAAGTCTT
GCGTCTTGTGAATTGTAAATTGAACCGTTTGCGGCAAAGGCGACTTGAAC
CGTTCGCTGTTCGCGCCGCTTGTGCGTGTTTGACACGTTTCGATGCCTGG
TCCGGTTCTCCCCAATACATACATATCGTATCACGCACAGACGTATAACG
GCAAGTTGGCGTTGGGAACCTTCCTCGCCGATGTCAACAAGATAAAAGCT
TAGTTAGCGTAAAATGAATTGTTGCAAGAGCTCGGTGGCTTTGCAATTGT
ACTCGGATCAACAACCTGATTCGCTAGGCTCCACCATCGGAATTCTATAA
TAACGTCGTTGTGTAGTGTGTGACGCCCGTGCTTGTCATCTCCCACAGGC
CAATACCTCTGGTTGCTAAGTGGTCCTCCGCACTAGCGCTCGGTCAGCGG
AGCGTCCCTCGAGTTTCTCTCTGCTACATATGTTTTGACCCAGTGATCGG
TGCCTCGGGCAGGGACGCATGCTTTTCGTTTCAAGTCTGTGGCAAAAACC
GAAGAAATAACCCTCCTTTCGTGTTCATGTTGTGTGTGATTCTTCTCTTC
CTGGGAATATCCGCGTCCGCGGTCGTTTCCGTTCAGCTCCGAACCTCCTC
GTAGGCGTGTTGAAACACTAACGTCCTTCGCGCTGTTGTGAACTCAGCCC
CCCTCCTCCCCGCTGTTTTTGTTCGAACAACAACAATCGCGTGACTGCAG
CGGAGCGTCGTCCGGATGTCGGCAGAGGGTGCGTTGGACAGGGCACAGTT
CCTGACCGCCTCTGCCGCGGTGGCTGCTTCTGTCGCTGTGCTGCCGTTCG
CGGCTGCAGCAGACGAGGAGCAGGTGAGAGTAGCGAAAGTTCGCCCTCGA
TTCGATCCAAACACCTATGCTTACTGCAGCGTCTTCGCCTGCATTGTAGG
AAAGACCGAAAGGTCCTACGGTAGGTACGACGAGACAAGGGTTTCGCTCC
CTGATTTATGCTGTTGACGTCACACAAGCTGGGAAGGTTAAGGTCCATAA
AGAAGAATCTCACAAGCTTCTAGATATTCATAGATATCTCCCTCTTTTTT
TTGTCCCGACCAGCGCACTGAGCTCTCATCGAAAGGAATTCAACATAGAC
CTTATCGCCTCCCGTCTCAGAGGGCGTTTCTGCCGTCACGTCGGCTATTT
TTCTGTCAAAAAGCCCAAGCACTAGTCGCTCTCCTCCGCCGTAACCACGG
CTGGTCGGTCAGCAGAAGAGTGTTGGACTGGCGCGGGAACCGATGAGGTG
AAAATGTTCACTCACAAACTTCATTGGTGAACGGTATCCCAGCGTGTTGC
TGTGAGGCATCGGGATTCGTTGCAGAACGCCTTCTTTATGACGGCCAACG
AGCTGCGACAGGGCTACAATGTTGAGGCACCGCTTCGATCTGCGCCACGA
TTTTTGAACAACATTTAGCTGGATGATGAACAGCCGGTGGCGGGTGATTT
CCACCGCAAGTCCGTGGCTGCCTTGCCTCTCCTGACGATGGTCTCCCAAC
ACGTGTCAAGTATCGAAGCTACACACACAAGACTAAGTGAAGGGAAGACA
GCCGAGGAAGTGGTCAATACTTGGTATCGCTCCCATCAAAGCACGAACAA
TCTCGAGAGACGGTTGAGAGATCAAGGCAACGACAGCAAAGCCTGCGGTG
ATCCCATCGGGGCGCAAACGACCCACGTCCGTGGATTGACTTCGTACACG
AGGAGCGTAGTGCACAGACCAGGAGATTACGTGTACCACCATCAGCGCGC
CGTCAGGTGCGTCCTTTGCTGACCGCTGAACACACTCTTGGAAGCAGATC
GAAACAACGCAAGTGAAGCTTGTGACCACCAAGCTTGGAGGACAGCTCGA
ACCGTTCGCCGACGTGTCCAAGGGCTACCGCCTGGCCAAGCCGCTGGGTT
GGAACCGCTACGACGGGACTTCGGGCGAGTACACGGTCAAGATGGTTGAC
CTCGTCGACCCCACCACGCTGATCCTGCTCACCAACTCGCCGGTCAAATC
CGACACCGAGGTGAGTGTGCGAAGGAGAGGGCGGGGAGCACCGGGACAGG
TTTGTCTTGTGATGATTTTGTATGATCATGGTCGCCACTCTCACCTTGTA
GCGCAAACCTTCGAATCAACGGTTACGCGGAAGATTTGCGTTTGCACCTG
TACATCTCTCGGTCATCTCCTCGTTTGGCGCGGAAACCTCGGACCCCTTA
CTCTTGAAACAAAGTTTCACCGCGTGTACGCGGACGCCTCTTCATGAATA
GTGACCAAACGCTTATACCGTCCCTAATGAGCGATGCACTCCGACGTTGG
TACACCTCAGCCGAAAGCGATTTTGAAGCGATTTTTATTTTCCCATGGAT
TCGTACCTCACCACATGCAGCTTGTTGCGCCGCATGGCTCTGTTTACTCA
TTTTCCGATGACCCTCGTTCGATTTTCGATCCGACGGTCTTCGTACCTCC
CCCAGCTTTCCACGCTGGGAACGGTGTCTCAGGTCGGAGCGAAGCTAAGC
AAGGGCAGGGACATGGAGTTGGTTAGCGCAAGGGACCGTATCACAGAAGG
GATTCGACTCTATGTGAGTGCGCGGCGCTGCAACTTCAGCCTGTCGATGT
GGTGGGAACGCAGGGACCTCAAGCGCATGCTGGCGAGCGTTGTCGTGTCG
TTGCATCGGTCAGGAGGCGTGTCTTTCAGGCGTCACCAATTGAGCGGTGA
AAGCCTTGTTCTTCTTTTTGTGGTGGTTAGTTCGTCCTGGCATGTCCTGA
GTTGTCGGTTTTTATGAAGACCTCAAAGTGTCTGGTCTAGTTCTGCCGAA
TGAACCTATTTGTCACTTTGGATATACCCTGGTAAGATGTAAGATTGGAA
AGCGCCCGTCCTTTCCACACTCCTCCTGCGTACAAAGCCTGGTTACGTCT
GGGCAACGCCTCTGTTTCTGTGCCCGTGATTTTGACGCTCTTTTGCCAAC
TCGTCATTCGAGTAAGAAAATATTTTGCACCGCACACCACTTGCACACCC
GAGAAAGACGAAAGATTCCTCTTGATGATAGTTTTGCAACTAACTGCGTG
CGCAGCACCGTTGTTTGTGCGTGAAGTGCAGAAGTCGTTTACGGCAGGTA
CTGGTGTTTGGGGGGCTTCTGCCCTCAGGACGGTGACGCCTCATGACTTA
TCATGGGGTATTGCTTTTGGCCTGATGACTCGTGAGCATCACGCTCTCCG
GAGTATACCGTTAGGAACGACATGGCGCCGTGTGTTGTTTTGGCGCTCCG
AACATGGCTTCCATTTCTCGCGTAATCATAAAGCGAGGATCGGGAATGGG
AGGGGGGCACGGTACATGAAAGGGTTCCATATCTTGTCCTTGCTGTCCTA
CGCTCGTGGCAATCGAGAACATAGTAATGGCTGACGTCTGATTCAAGTTT
TCCCCTAAAACCTGCGCCACCCGGGTTCCTTCGTGGATCCAATCAACCCA
TATCATGACGGCGTGGTTTGACCTTGTGCGCTTCCTCAGGACTTTGAGTT
CAAGGGCGGGGGGCGCCGTGAGCTAAAGACGTTGTCGGTGAACAAGAATA
AGCTGTGGAACCTCACCCTTGGGTGCCCAGAAAAGGCGTGGCGGAAGGAA
GAAGAGCCCTTCAGGGCAATCGTAGACTCGTTCCTCCCTAGGCTGTAACG
GATCTTCGACGCACCTGAGAAACCGAGCCACCGCCGCGCGTTGACCACAG
GTTGTGGAGACACCGAAAGCTTCCAGAACCAGGGCATCTTGTAGTCTAGC
GTAGAGTCACCAGCAGAGTCTCGAGATACCTTGAGATGGACAGCGATGTG
GAATATCCCAAAACGCACTAGGAAAGGCGTGGGATCTCCAACCGCCTCTG
GTGTTTTAGACAGGAGCGTAGCTAGCGGTTTGCTCTCGCTGCTGTGCACC
GGGAAGCACTTACTGTAGGCCTTCCTCTTTCGTTCGTTAAATTATTGTGA
GGAGCATTTTTATTTTGTTAGGAGAGGCTTCAAAGCTGATCAGAGAAATG
CACGTGCATATATCTTGGCGGCGTCCGCTGTTCAGACAAGAGGTAGTGCA
CCCTGGGCAAGCACGTGGTTGGGTCTCGTTAATGCAGCAGACCTGGCAGT
GCGTCGTTTACGGTAACGGCTGTGTTGCAAGCCATTGAAAGGCAATTTCG
CATAGTCGTGCCGTGCGGGGCACAAACCATTACAATTTCGCTCATCACAC
TTACAAACAGGTGCGCAGGAAGGTGGTGTACGCTTGATGCATACCAAGTA
TCTAGAGATGGTGTTGCCTGCTCTTGAGGCAAAGGGGACTTAGACGAACC
CTCGAGTTGATGCATTTTTTTACCGTTCTCCGGTTGCTGGTACGCGAGCG
TCCTAGAGGCTACCATACGTACCACCGCGAAGTCCTTGACGCGTTTGTTG
ATCGGATTGGGGATACGATATCTTGTTTGCCTCCGGGTCTGGGTGCTTCC
CCTGCGAGCGCAATGCTTCGTGGTTCTTGACGGTAGATCTGTTTTATTTC
CTTTTCCTTCATCGTGTGCGTGCAGTAGAATTTCCGCTCGTTCCGGATAA
AGCACGACGAAGCTGATTGCTGACCGCATGGTGGCCGGTGCCTGACCCGT
CAATGTGCACGTTCCAACGCGACGCTTACCGCGCCGAAAAATTAACCCCG
AAACCACCCCGTAGCTGCTTCGTTGCCACCCAGAGTCGCACGGTTTACCG
CACCGCTGTCCACTCTCGCTGAATAAGAACTATTTTGACGAGTCCTACAG
TATAGTAGGTACAACGAGATGTCGAAGAAAGTGGACCACAGAAGAACTTG
GAAATTTGTAGTGTCCATGAGGTGGAGTCCGATGGTCCGATCGTGGATAA
CTTGTTTTTGCATCATTTCTGACAGGGGAGAGAGCAATGGGGGGTGCTGC
CCGATACATGGTTGGCAGCGCAAAACAATCCAAAACACCTAGTGTTGTCT
GTAGAAAGCGGGCGAACCGCTGTACATGATAGAACCGGCTCTGCGCACGT
ACGAAGTACAGATAGATCCTGCAGGGATCCGTCGGCCATATTTCTC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1190:7273..12868-

>mRNA_H-canaliculatus_F_contig1190.1669.1 ID=mRNA_H-canaliculatus_F_contig1190.1669.1|Name=mRNA_H-canaliculatus_F_contig1190.1669.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1398bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1190:7273..12868- (Hapterophycus canaliculatus Oshoro5f female)
ATGCTTCGCGCCGTAACGTTTGCTGTTGCACTCGGTCTTGCCAATGGCTT
CATCACGCGAACCGCTGTTCGAGTTGTGGCCAACCCGACGTCTGAGATGC
TTCGCGCCGTAACGTTTGCTGTTGCACTCGGTCTTGCCAATGGCTTCATC
ACGCGAACCGCTGTTCGAGTTGTGGCCAACCCGACGTCTGAGCGGAGCGT
CGTCCGGATGTCGGCAGAGGGTGCGTTGGACAGGGCACAGTTCCTGACCG
CCTCTGCCGCGGTGGCTGCTTCTGTCGCTGTGCTGCCGTTCGCGGCTGCA
GCAGACGAGGAGCAGCGGAGCGTCGTCCGGATGTCGGCAGAGGGTGCGTT
GGACAGGGCACAGTTCCTGACCGCCTCTGCCGCGGTGGCTGCTTCTGTCG
CTGTGCTGCCGTTCGCGGCTGCAGCAGACGAGGAGCAGATCGAAACAACG
CAAGTGAAGCTTGTGACCACCAAGCTTGGAGGACAGCTCGAACCGTTCGC
CGACGTGTCCAAGGGCTACCGCCTGGCCAAGCCGCTGGGTTGGAACCGCT
ACGACGGGACTTCGGGCGAGTACACGGTCAAGATGGTTGACCTCGTCGAC
CCCACCACGCTGATCCTGCTCACCAACTCGCCGGTCAAATCCGACACCGA
GATCGAAACAACGCAAGTGAAGCTTGTGACCACCAAGCTTGGAGGACAGC
TCGAACCGTTCGCCGACGTGTCCAAGGGCTACCGCCTGGCCAAGCCGCTG
GGTTGGAACCGCTACGACGGGACTTCGGGCGAGTACACGGTCAAGATGGT
TGACCTCGTCGACCCCACCACGCTGATCCTGCTCACCAACTCGCCGGTCA
AATCCGACACCGAGCTTTCCACGCTGGGAACGGTGTCTCAGGTCGGAGCG
AAGCTAAGCAAGGGCAGGGACATGGAGTTGGTTAGCGCAAGGGACCGTAT
CACAGAAGGGATTCGACTCTATCTTTCCACGCTGGGAACGGTGTCTCAGG
TCGGAGCGAAGCTAAGCAAGGGCAGGGACATGGAGTTGGTTAGCGCAAGG
GACCGTATCACAGAAGGGATTCGACTCTATGACTTTGAGTTCAAGGGCGG
GGGGCGCCGTGAGCTAAAGACGTTGTCGGTGAACAAGAATAAGCTGTGGA
ACCTCACCCTTGGGTGCCCAGAAAAGGCGTGGCGGAAGGAAGAAGAGCCC
TTCAGGGCAATCGTAGACTCGTTCCTCCCTAGGCTGTAAGACTTTGAGTT
CAAGGGCGGGGGGCGCCGTGAGCTAAAGACGTTGTCGGTGAACAAGAATA
AGCTGTGGAACCTCACCCTTGGGTGCCCAGAAAAGGCGTGGCGGAAGGAA
GAAGAGCCCTTCAGGGCAATCGTAGACTCGTTCCTCCCTAGGCTGTAA
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