mRNA_H-canaliculatus_F_contig11811.1606.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11811.1606.1
Unique NamemRNA_H-canaliculatus_F_contig11811.1606.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: D7G0N4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N4_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 1.080e-130
Identity = 186/244 (76.23%), Postives = 205/244 (84.02%), Query Frame = 1
Query:    1 RDVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGSQRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQGSISFGRWGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIHCEAGAIGR 732
            +DVFWSQAQAQ+REH G+RQVL ALNRLW+PDA +P DLTKSLSFCDRAFVG PTCSSL G++SVVMAGGTGGSQRWL+ H  QAY +IF+GRWEDWDPFKAGPRMRAAENAACSWG D + + P SI     G  APPQPFR            EVGN+HVVPMMRVATAF LLRPFMPDALEA+A   DWLCGAG+GPEL+LSPKWHQP+M+ALVRLPPLSPGDAVFYHTD+IHCEAGAI R
Sbjct:   16 KDVFWSQAQAQAREHDGIRQVLAALNRLWRPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESVVMAGGTGGSQRWLNPHLHQAYDDIFQGRWEDWDPFKAGPRMRAAENAACSWGEDDTPSPPGSI-----GVGAPPQPFRXXXXXXXXXXXXEVGNVHVVPMMRVATAFTLLRPFMPDALEANATDGDWLCGAGDGPELSLSPKWHQPLMDALVRLPPLSPGDAVFYHTDIIHCEAGAINR 254          
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A6H5JLR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLR0_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 1.310e-125
Identity = 184/244 (75.41%), Postives = 202/244 (82.79%), Query Frame = 1
Query:    1 RDVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGSQRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQGSISFGRWGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIHCEAGAIGR 732
            +DVFWSQAQAQ+REH GVRQVL ALNRLW+PDA +P DLTKSLSFCDRAFVG PTCSSL G++S VMAGGTGGSQRWL+ H  QAY +IF+GRWEDWDPFKAGPRMRAAEN+ACSWG D + + P SI     G  APPQPFR             VGN+HVVPMMRVATAF LLRPFM DALEA+A   DWLCGAG+GPEL+LSPKWHQPIM+ALVRLPPLSPGDAVFYHTD+IHCEAGAI R
Sbjct:  189 KDVFWSQAQAQAREHDGVRQVLAALNRLWRPDAHSPADLTKSLSFCDRAFVGNPTCSSLKGRESAVMAGGTGGSQRWLNPHLHQAYGDIFQGRWEDWDPFKAGPRMRAAENSACSWGEDDTPSPPGSI-----GIGAPPQPFRXXXXXXXXXXXXXVGNVHVVPMMRVATAFTLLRPFMADALEANATDGDWLCGAGDGPELSLSPKWHQPIMDALVRLPPLSPGDAVFYHTDIIHCEAGAINR 427          
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A835YIE9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIE9_9STRA)

HSP 1 Score: 126 bits (317), Expect = 8.970e-31
Identity = 86/259 (33.20%), Postives = 121/259 (46.72%), Query Frame = 1
Query:   10 FWSQAQAQSREHLGVRQVLDALNRLWKPDAKA----PMDLTKSLSFCDRAFVGTPTCSSLMGQKS------------------VVMAGGTGGSQRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQGSISFGRW-GEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIHCEA 717
            +WS  Q  +RE+  +  VL AL  LW  +        +DL  +L++CDR  +G P CS     +S                     A G+   + WL    +  YR + EGRWE+WDPF AGPR    +  + SW            + G          FRP+QG +S   W  + GNL +VP++R A A+ LL+PF  DA  A   G   + G      L L+ + H P++ ALV LPPLS GD V +H D+   E+
Sbjct:   42 YWSHPQLMARENPRIATVLTALTALWHTEGSTVGVPAVDLQTNLTYCDRLCIGKP-CSPHGDFRSRGGGXXXXXXXXXXXXXXXXAAMGSPAREHWLHPRFTGVYRPVIEGRWEEWDPFHAGPRAALDQALSGSW-----------TKHGA---------FRPWQGFLSLAPWLQQEGNLRLVPLLRAAMAYALLQPFTADAPPAADTGESSVSGMHG---LRLNERDHAPLLRALVTLPPLSAGDLVLWHPDIAIAES 276          
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A1R0GPY8_9FUNG (Uncharacterized protein n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GPY8_9FUNG)

HSP 1 Score: 118 bits (296), Expect = 2.040e-27
Identity = 70/237 (29.54%), Postives = 123/237 (51.90%), Query Frame = 1
Query:    4 DVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGSQRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQG--SISFGRWGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIH 708
            +++WS+AQ ++R H    Q   ALNRLW  D    +DL  +L++CDR  +  P   S   ++ +      G ++RW   ++ + +  I EG+WED DP+    R+ A      + GG +                     FR +QG  ++S  + G  G+L + P+++  TA +L+RP MPD L++ +     + GA  G ++ + P+    +++  V +P ++PGDAVF+H D++H
Sbjct:  132 ELYWSKAQVEARSHPHFLQTATALNRLWHADENDEVDLETNLAYCDRVRIRKPKDHSFKLREHL----DGGSTERWEDENYRKCFSNILEGKWEDHDPYDVTHRLDAKMQLHDAPGGCEM--------------------FRTYQGWLALSSAKSG-CGSLQLCPLIKETTAAILMRPLMPDLLDSSS-----MAGAFPGTQIDIDPELLPQVVDTTVCIPDMNPGDAVFWHCDMVH 338          
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A2T9XWP4_9FUNG (Uncharacterized protein n=2 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9XWP4_9FUNG)

HSP 1 Score: 114 bits (285), Expect = 7.340e-26
Identity = 73/237 (30.80%), Postives = 120/237 (50.63%), Query Frame = 1
Query:    4 DVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGSQRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQG--SISFGRWGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIH 708
            +++WS+AQ ++R H    Q   ALNRLW  D  A +DL  +L++CDR  +  P  SS   ++ +      G ++RW    + + Y +I  G+WE+ D F A  R+ A      + GG +                     FR FQG  ++S  + G  G+L + P+++  TA +++RP + D +   + G     GA  G ++ + PK    I +  V +P +SPGDAVF+H D++H
Sbjct:  132 ELYWSKAQVEARSHPNFIQTAAALNRLWHADENAKVDLGTNLTYCDRLRIRKPGDSSFKLREHL----DGGSTERWEDECYRKCYSDILNGQWENHDAFDATHRLDAKMQMYDAPGGCEM--------------------FRTFQGWLALSSVKSG-CGSLRLCPLIKETTAAIIMRPLLQDIIHTSSMG-----GAYPGTQIDIDPKLLSQITSICVPIPDVSPGDAVFWHCDMVH 338          
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A367JR36_RHIST (Uncharacterized protein n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367JR36_RHIST)

HSP 1 Score: 112 bits (281), Expect = 2.990e-25
Identity = 76/237 (32.07%), Postives = 118/237 (49.79%), Query Frame = 1
Query:    4 DVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGSQRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQG--SISFGRWGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIH 708
            +++WS++Q  +R H G  +   ALN LW       +DLTK+L +CDR  +  P  S    Q+ V     +G  +RW    + Q Y +IF G WE +DPF A  R+ A  +   S GG  +                    FR FQG  +IS  + G  G L V P+++ ATA  L++P   + ++      D++ GA  G    +  + +  I++ +V +P + PGDAVF+H DL+H
Sbjct:  140 ELYWSKSQVAARSHAGFEKATLALNTLWHASEHTAIDLTKNLGYCDRLRIRKPGDSLFALQEHV----DSGSLERWQDPEYRQCYTDIFHGEWEKYDPFDATRRVEARMDYYNSPGGCSA--------------------FRNFQGWVAISDIKTGS-GTLRVCPLLKEATALFLMKPLTENYIDK----LDYV-GAYPGLAQGIDKQDYPQIVDNMVSMPDVKPGDAVFWHCDLVH 346          
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A1D2MPX7_ORCCI (Uncharacterized protein n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2MPX7_ORCCI)

HSP 1 Score: 110 bits (276), Expect = 1.540e-24
Identity = 69/238 (28.99%), Postives = 120/238 (50.42%), Query Frame = 1
Query:    4 DVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGS-QRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAA-CSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQGSISFGR-WGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIH 708
            +++WS++Q  +R H        A+N LW    +  +D + + ++CDR  +  P  +S    + +      GGS +RW    +   ++ I  G WE +DP+ A  R+ A  +   CS G                        FR FQG +S    +   G L V P+++++TA+++LRP + D +E     T  + GA +G +  + P++HQP+++A+V +P ++PGD VF+H D IH
Sbjct:  142 ELYWSKSQVAARSHPNFVAAQTAMNSLWHAAPETLIDFSINTTYCDRLRIRKPGDTSFALAEHI-----DGGSVERWEDPEYRNCFKSILSGEWEKYDPYDATHRVNAIMDLYNCSGGCSM---------------------FRSFQGWLSLSTVFPGGGTLRVCPIIKLSTAYLILRPLLEDLVE-----TTNMAGAKQGVQQHILPEFHQPLIDAVVSIPQVNPGDCVFWHCDGIH 348          
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A7S1AL14_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AL14_NOCSC)

HSP 1 Score: 110 bits (275), Expect = 2.330e-24
Identity = 80/254 (31.50%), Postives = 118/254 (46.46%), Query Frame = 1
Query:    4 DVFWSQAQAQSREHLGVRQVLDALNRLWKP----DAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGS-QRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAEN------AACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQGSISFGRWGEV-GNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIHCEAGAIG 729
            +V+WS+ Q + R +  V Q   ALNRLW      D + P+D+ + L++ +R  +     +S      +      GGS +RW    + + Y +I  G WE++D + A  R  A  +        CS                          FR FQG +S  R G   G L VVP++R  TAF++LRPF+ D  E+        CGA  G    L PK+H  ++  LV +P + PGD V++H DLIH   G+ G
Sbjct:  141 EVYWSKPQGEMRMNPAVLQTQTALNRLWHCRAGYDGQVPVDVHRPLTYGERLRIRAAGDTSFTLGPHI-----DGGSVERWEDDEYRRVYEKILTGEWENYDAWDATHRAEARCDLYRLGVGLCSI-------------------------FRSFQGWLSLSRSGHGRGALMVVPLVRETTAFLMLRPFLDDVPESS------FCGANPGKTQDLLPKFHAAVIEGLVPIPDVGPGDTVWWHCDLIHAVEGSNG 358          
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A226EL10_FOLCA (Uncharacterized protein YbiU n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226EL10_FOLCA)

HSP 1 Score: 110 bits (274), Expect = 2.820e-24
Identity = 71/243 (29.22%), Postives = 119/243 (48.97%), Query Frame = 1
Query:    4 DVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGS-QRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAA-CSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQG--SISFGRWGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIHCEAG 720
            +++WS+AQ  +R H        A+N LW  +  A +D + ++++CDR  +     +S    + +      GGS +RW    + + + +I  G WED DPF A  R+ A  +   CS G                        FR FQG  S+S  + GE G L V P+++++TA+ ++RP + D +++       + GA  G +  + P  H  I+N +V +P + PGD VF+H D++H   G
Sbjct:  141 ELYWSKAQVAARSHQNFLLATKAVNNLWHAEPTAAIDFSYNVAYCDRLRIRQKGDTSFTLNEHI-----DGGSVERWEDPEYRKCFDKILSGEWEDHDPFDASHRISANMDLYNCSGGCSM---------------------FRTFQGFLSLSTVKPGE-GTLRVCPLIKLSTAYFIMRPLLDDLIDSKE-----MAGAIPGAQQHILPSLHPHIVNNVVSIPEVGPGDCVFWHCDMVHAVEG 351          
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Match: A0A2T9XXW3_9FUNG (Uncharacterized protein n=3 Tax=Harpellales TaxID=61421 RepID=A0A2T9XXW3_9FUNG)

HSP 1 Score: 108 bits (269), Expect = 1.320e-23
Identity = 68/237 (28.69%), Postives = 114/237 (48.10%), Query Frame = 1
Query:    4 DVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAFVGTPTCSSLMGQKSVVMAGGTGGS-QRWLSAHHSQAYREIFEGRWEDWDPFKAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQGSISFGRWGE-VGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGPELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIH 708
            +++WS+AQ ++R H    Q   ALN+LW     + +DL  +L++CDR  +  P   S + ++ +      GGS +RW  + + + +  I  G WE  D +    R+ A      + GG +                     FR FQG ++        G+L V P+++  TA +++RP + D LE  + G     GA  G ++ + P     + +  V +P +SPGDAVF+H DL+H
Sbjct:  135 ELYWSKAQVEARSHPHFVQTTTALNKLWNAQEDSLVDLETNLTYCDRLRIRKPNDESFVLREHI-----DGGSVERWEDSSYRKCFSNILAGEWEKHDSYDVANRLDAKMQLYDAPGGCEM--------------------FRTFQGWLALSNSNSGCGSLRVCPLVKETTAAIIMRPLLQDILETSSMG-----GAYPGTQIDIDPVMLPQVTDICVSIPDVSPGDAVFWHCDLVH 341          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11811.1606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0N4_ECTSI1.080e-13076.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLR0_9PHAE1.310e-12575.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YIE9_9STRA8.970e-3133.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1R0GPY8_9FUNG2.040e-2729.54Uncharacterized protein n=1 Tax=Smittium mucronatu... [more]
A0A2T9XWP4_9FUNG7.340e-2630.80Uncharacterized protein n=2 Tax=Smittium megazygos... [more]
A0A367JR36_RHIST2.990e-2532.07Uncharacterized protein n=1 Tax=Rhizopus stolonife... [more]
A0A1D2MPX7_ORCCI1.540e-2428.99Uncharacterized protein n=1 Tax=Orchesella cincta ... [more]
A0A7S1AL14_NOCSC2.330e-2431.50Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A226EL10_FOLCA2.820e-2429.22Uncharacterized protein YbiU n=1 Tax=Folsomia cand... [more]
A0A2T9XXW3_9FUNG1.320e-2328.69Uncharacterized protein n=3 Tax=Harpellales TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11811contigH-canaliculatus_F_contig11811:335..3249 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.0
Seed ortholog evalue1.6e-105
Seed eggNOG ortholog2880.D7G0N4
EggNOG free text desc.Protein of unknown function (DUF1479)
EggNOG OGs2CK8J@1,2QWFN@2759
Ec32 ortholog descriptionIsopenicillin N synthase-like
Ec32 orthologEc-14_001650.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size732
Cds size732
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11811.1606.1prot_H-canaliculatus_F_contig11811.1606.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11811 335..3249 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928882.5527825-CDS-H-canaliculatus_F_contig11811:334..4651622928882.5527825-CDS-H-canaliculatus_F_contig11811:334..465Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11811 335..465 +
1696845599.8968391-CDS-H-canaliculatus_F_contig11811:334..4651696845599.8968391-CDS-H-canaliculatus_F_contig11811:334..465Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11811 335..465 +
1622928882.5651808-CDS-H-canaliculatus_F_contig11811:857..9781622928882.5651808-CDS-H-canaliculatus_F_contig11811:857..978Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11811 858..978 +
1696845599.909688-CDS-H-canaliculatus_F_contig11811:857..9781696845599.909688-CDS-H-canaliculatus_F_contig11811:857..978Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11811 858..978 +
1622928882.5773168-CDS-H-canaliculatus_F_contig11811:1514..17391622928882.5773168-CDS-H-canaliculatus_F_contig11811:1514..1739Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11811 1515..1739 +
1696845599.9209862-CDS-H-canaliculatus_F_contig11811:1514..17391696845599.9209862-CDS-H-canaliculatus_F_contig11811:1514..1739Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11811 1515..1739 +
1622928882.5887752-CDS-H-canaliculatus_F_contig11811:2001..21441622928882.5887752-CDS-H-canaliculatus_F_contig11811:2001..2144Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11811 2002..2144 +
1696845599.9288516-CDS-H-canaliculatus_F_contig11811:2001..21441696845599.9288516-CDS-H-canaliculatus_F_contig11811:2001..2144Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11811 2002..2144 +
1622928882.6027315-CDS-H-canaliculatus_F_contig11811:2763..28401622928882.6027315-CDS-H-canaliculatus_F_contig11811:2763..2840Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11811 2764..2840 +
1696845599.9367535-CDS-H-canaliculatus_F_contig11811:2763..28401696845599.9367535-CDS-H-canaliculatus_F_contig11811:2763..2840Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11811 2764..2840 +
1622928882.6238017-CDS-H-canaliculatus_F_contig11811:3214..32491622928882.6238017-CDS-H-canaliculatus_F_contig11811:3214..3249Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11811 3215..3249 +
1696845599.9453852-CDS-H-canaliculatus_F_contig11811:3214..32491696845599.9453852-CDS-H-canaliculatus_F_contig11811:3214..3249Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11811 3215..3249 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11811.1606.1

>prot_H-canaliculatus_F_contig11811.1606.1 ID=prot_H-canaliculatus_F_contig11811.1606.1|Name=mRNA_H-canaliculatus_F_contig11811.1606.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=244bp
RDVFWSQAQAQSREHLGVRQVLDALNRLWKPDAKAPMDLTKSLSFCDRAF
VGTPTCSSLMGQKSVVMAGGTGGSQRWLSAHHSQAYREIFEGRWEDWDPF
KAGPRMRAAENAACSWGGDQSSASPESIEGGTQGRQAPPQPFRPFQGSIS
FGRWGEVGNLHVVPMMRVATAFMLLRPFMPDALEAHAAGTDWLCGAGEGP
ELTLSPKWHQPIMNALVRLPPLSPGDAVFYHTDLIHCEAGAIGR
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mRNA from alignment at H-canaliculatus_F_contig11811:335..3249+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11811.1606.1 ID=mRNA_H-canaliculatus_F_contig11811.1606.1|Name=mRNA_H-canaliculatus_F_contig11811.1606.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2915bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11811:335..3249+ (Hapterophycus canaliculatus Oshoro5f female)
AGGGACGTATTCTGGTCCCAGGCGCAGGCGCAGTCCAGGGAACACCTCGG CGTCCGGCAGGTCCTCGATGCCCTCAACAGGCTCTGGAAACCAGACGCGA AGGCTCCGATGGACCTTACCAAGAGCCTCAGGTATGTGCTTTTGGCGTGC TACCAAATCTGCTGCCGGTATGTGGTGGTGGCGTTGATGGTGGTGGCGGT GGGGTGTAAGTGATGGTCGGGGCGGCCGTTAGGGGCAAGGTGATACAATT GGTCTTTTTGTCGCCCTCGTGACCAGACCTCTGAACAGGGGAGCTATTGT GACCTGTTCGAGCCATGTGCTGTCGCATGTTGCGGTCAGCGCCAACAGGC CAGGCCTTTTGAGGCCGTGTGCCAACCCCATGCTTTGCGGCCGTGGGTTC AAACCGCACGACGGCTATCGATGTGCTCGCCGAGCTCCTCGATGAAGAGA CTGAATCGTGCTGAGCCTTGCTTCTGTTATTTTTTTTTGTCGTCGCCGTG GTGGTTTTTGTCTCACCAAGCAGTTTCTGCGATCGGGCATTCGTCGGAAC TCCCACTTGTTCGAGCCTTATGGGCCAAAAGTCAGTGGTCATGGCGGGGG GAACTGGTGGCTCTCAGCGTTGGCTCAGCGCCCACCACAGTCAGGTATCG CGTGGTGACAGGTTCCTATTGATAGGTACCTGATGCCGTCGTGCTTCGTT TTGCTTCGGCCGCGTCTCGTGGCCGTCATGCTTTCGGTGCGTCCCCACCA TGTCTAGGAGTTCAGCTCATCGCCGCAGGATGTTGCACCTCAGCGTATCG CTTCCCAGCATGTCGCTCCCTCCGCTCCCAAACCAGTCGCGCTTCCTGAG GTAGACCCATGCCGCACGCAGTAGCCAGTGCGATACCTATCCGCCACCCA TGTGATGCCCATCATAACCTTTGGCATAAAGTGAACCCTGAGCACTCTCG AGCCTCGCGCCGACTCGTGCCACCCCTCTGAGCATGCCACCCTCTGGCAC ACGGTCCATTCCTCTACAAAACAGCACCACCCTTTGCCAGCATGACACGC CATGGCACACCATACCATACCATACCGTACCAAACCGTACCACACCTTAC GTTCCGCAAAATGAAGCGAAGCTCAGATCGTACTCGTCCCTTCCCGATGC CGTATTTCTGCGCGAACTCCTTGTTCCCAGGCGTATCGCGAGATATTCGA GGGTCGTTGGGAAGACTGGGATCCGTTCAAGGCGGGCCCGAGAATGAGAG CGGCGGAGAACGCGGCGTGTTCTTGGGGAGGGGATCAGTCCTCCGCGTCC CCGGAGTCCATCGAAGGAGGCACGCAAGGGAGGCAAGCGCCACCGCAGCC GTTCCGGCCATTTCAGGGGTCCATCTCGTTTGGGCGGTGGGGCGAGGTCG GCAACGTGAGTGGACTATCCTGTATGATGTTGTCCCAGGAGTTGGCGACG TAGTATTTCTTGTTCTTTTTCTTGTTGCTGTTGCTGTTGCTGTTGCTGTT GCTGTTGCTGTTGCTGTTGCTTTTGTCGCGTCGTTCTCGCCATTGCGTCG TTTTCGTCACTCTTGTCGTTGAACGCGGTGATAACGCTCTGCCGCGCGAC GTACCCTCAATGCCCCTTCTTCCTCCACTTCCATCCCTTCTCTCGCACCG CGGATTCTTGGGTGCAGCTTCACGTGGTGCCCATGATGCGCGTGGCCACC GCCTTCATGCTGCTTCGGCCGTTCATGCCGGACGCCCTCGAAGCCCACGC CGCGGGGACGGACTGGCTGTGCGGGGCGGGGGAAGGGCCGGAACTGACGC TGTCGCCGAAGTGAGTGCCCCTTGCCCTATGCCCGCGGTAATTTATGCTT ACCACTCACCTCCTTCCCGCGGTTTGCCCTTGACTACGGAGCCGGCTTGC GCCCCCTGCTGTCGTGTGTCATTTCAAGCGTCAGCGGTCCACATGGGTTT TGCCGAGCTGCTCCTCTTTTCCTGGCGTTTGTTTGCTGGTTTTGCCAGCC TCCTGCTGTTCGCACGTTTGCACTCCCTTGGGCAGCCCTGTGCACGGCCT CCTTCACCGCCCCGATTCCGCCTTGTTATCGCACGGCGTTGTGCTTTTCG TCGTGTGGTAGAATTGCTGCCTCCTCTGCAGTAGCTGTTATTTTGCGCAG GGCCATTGGTTCGGGGTTTGACGAAGGAAATTTCACGCGGGAAAGAGATA GGGTTGGTGCTACAACAGCAGCAACGACAATCCTCGTCTCATGCAACCCC AATCCATCTGATTTTCTTTCATCCATTCCTTTTGTGGACAAAATCAAATC TGATTCTGATTCGGTTGTTCAGCCATCGACATATCGATGTTGTGTTTCGT CTCTCCGCTGTGCGGGTGCCTCTCCTTGACTAGGTGTCTCCATCTATTGT CGCCCCCTCCGCTTCGTTTTGTGCTGCAGGTGGCATCAGCCAATCATGAA CGCTCTGGTGCGGCTTCCGCCCCTCTCGCCAGGGGATGCTGTGTTCTACC ACACAGGTAGGCCGTTCTGCCCCTATGGTGGGCTGTCGCTCCACACTGGT ACCACCGAGTCAAGGGAGCACAAATCAGCCCGAGCCGCGAGTCGTCATTT TTCCCGGCAGCTCACCCTCGTCCTTTTCTCACGATGCTTGAAGGTCACCC CCTCCTTCGCCTGCCGCCCCCCGACCCCGCGTTCGAGTCATCTCAAAAAC AATCGCACGCCAGTCACTCACAGCTCCAGTGACTTATGCAGCACGACCCC CCGTTTCCCGCCCCCCTCGCGTTCTTACGCCGCCGCTCGGAACACCCCGT CCTTTCTCTCCCTGTCTCTGCTCCGAATCTCCTCTCTTTTCGCCTGACGA AAACATCAACCACCACCACAACAAACGAAGACCTTATCCACTGCGAGGCG GGCGCGATCGGCCGT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11811:335..3249+

>mRNA_H-canaliculatus_F_contig11811.1606.1 ID=mRNA_H-canaliculatus_F_contig11811.1606.1|Name=mRNA_H-canaliculatus_F_contig11811.1606.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1464bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11811:335..3249+ (Hapterophycus canaliculatus Oshoro5f female)
AGGGACGTATTCTGGTCCCAGGCGCAGGCGCAGTCCAGGGAACACCTCGG
CGTCCGGCAGGTCCTCGATGCCCTCAACAGGCTCTGGAAACCAGACGCGA
AGGCTCCGATGGACCTTACCAAGAGCCTCAGAGGGACGTATTCTGGTCCC
AGGCGCAGGCGCAGTCCAGGGAACACCTCGGCGTCCGGCAGGTCCTCGAT
GCCCTCAACAGGCTCTGGAAACCAGACGCGAAGGCTCCGATGGACCTTAC
CAAGAGCCTCAGTTTCTGCGATCGGGCATTCGTCGGAACTCCCACTTGTT
CGAGCCTTATGGGCCAAAAGTCAGTGGTCATGGCGGGGGGAACTGGTGGC
TCTCAGCGTTGGCTCAGCGCCCACCACAGTCAGTTTCTGCGATCGGGCAT
TCGTCGGAACTCCCACTTGTTCGAGCCTTATGGGCCAAAAGTCAGTGGTC
ATGGCGGGGGGAACTGGTGGCTCTCAGCGTTGGCTCAGCGCCCACCACAG
TCAGGCGTATCGCGAGATATTCGAGGGTCGTTGGGAAGACTGGGATCCGT
TCAAGGCGGGCCCGAGAATGAGAGCGGCGGAGAACGCGGCGTGTTCTTGG
GGAGGGGATCAGTCCTCCGCGTCCCCGGAGTCCATCGAAGGAGGCACGCA
AGGGAGGCAAGCGCCACCGCAGCCGTTCCGGCCATTTCAGGGGTCCATCT
CGTTTGGGCGGTGGGGCGAGGTCGGCAACGCGTATCGCGAGATATTCGAG
GGTCGTTGGGAAGACTGGGATCCGTTCAAGGCGGGCCCGAGAATGAGAGC
GGCGGAGAACGCGGCGTGTTCTTGGGGAGGGGATCAGTCCTCCGCGTCCC
CGGAGTCCATCGAAGGAGGCACGCAAGGGAGGCAAGCGCCACCGCAGCCG
TTCCGGCCATTTCAGGGGTCCATCTCGTTTGGGCGGTGGGGCGAGGTCGG
CAACCTTCACGTGGTGCCCATGATGCGCGTGGCCACCGCCTTCATGCTGC
TTCGGCCGTTCATGCCGGACGCCCTCGAAGCCCACGCCGCGGGGACGGAC
TGGCTGTGCGGGGCGGGGGAAGGGCCGGAACTGACGCTGTCGCCGAACTT
CACGTGGTGCCCATGATGCGCGTGGCCACCGCCTTCATGCTGCTTCGGCC
GTTCATGCCGGACGCCCTCGAAGCCCACGCCGCGGGGACGGACTGGCTGT
GCGGGGCGGGGGAAGGGCCGGAACTGACGCTGTCGCCGAAGTGGCATCAG
CCAATCATGAACGCTCTGGTGCGGCTTCCGCCCCTCTCGCCAGGGGATGC
TGTGTTCTACCACACAGGTGGCATCAGCCAATCATGAACGCTCTGGTGCG
GCTTCCGCCCCTCTCGCCAGGGGATGCTGTGTTCTACCACACAGACCTTA
TCCACTGCGAGGCGGGCGCGATCGGCCGTACCTTATCCACTGCGAGGCGG
GCGCGATCGGCCGT
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