mRNA_H-canaliculatus_F_contig11810.1605.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11810.1605.1 vs. uniprot
Match: A0A6H5JY15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY15_9PHAE) HSP 1 Score: 363 bits (932), Expect = 9.290e-117 Identity = 176/220 (80.00%), Postives = 195/220 (88.64%), Query Frame = 2
Query: 416 LLVQAERRRKQTEECRDMIQTLRIVPNRSWGRASKPQQQRWEILGCNGLVEAAAAAEKSGAGGDGGLRLPDCTARPSAASDPLIAVCAGSTTRGVPFPDEQSLALFRFLLPSLARTADCGFRYVAVIGYDVGDGFFDGAAGKAKTLLWFESEVSRPATLRGLSIELELVRVENHIKKPGPVFTAITKAAYELGANYIYRVNDDSEMHTPWAASFVNALEV 1075
L+VQA RR KQTEEC+ M ++LRIVPN+SWG+A+KPQQQ+W++LGCNGL+E A G GGL+LPDCTARPSA SDPLIAVCAGSTTRGVP PDE SLALFRFLLPSLARTADCGFRY+AV+GYDVGDGFFDGA GKAKTL WFE+EV+RPA LRGLSIEL+LVRVEN IKKPGPVFTA+TKAAY+ GANYIYRVNDDSEMHTPWA SFVNALE
Sbjct: 138 LVVQAARREKQTEECKGMAKSLRIVPNKSWGKATKPQQQQWDLLGCNGLIETEARG-----GQGGGLKLPDCTARPSAKSDPLIAVCAGSTTRGVPSPDEHSLALFRFLLPSLARTADCGFRYLAVVGYDVGDGFFDGATGKAKTLAWFETEVARPAALRGLSIELDLVRVENAIKKPGPVFTAVTKAAYDRGANYIYRVNDDSEMHTPWARSFVNALEA 352
BLAST of mRNA_H-canaliculatus_F_contig11810.1605.1 vs. uniprot
Match: D8LIA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA3_ECTSI) HSP 1 Score: 247 bits (630), Expect = 3.610e-74 Identity = 123/145 (84.83%), Postives = 130/145 (89.66%), Query Frame = 2
Query: 641 PSAASDPLIAVCAGSTTRGVPFPDEQSLALFRFLLPSLARTADCGFRYVAVIGYDVGDGFFDGAAGKAKTLLWFESEVSRPATLRGLSIELELVRVENHIKKPGPVFTAITKAAYELGANYIYRVNDDSEMHTPWAASFVNALEV 1075
PSA SDPLIAVCAGSTTRGVPFPDE SLALFRFLLPSLARTADCGFRY+AV+GYDVGDGFFDGAAGKAK V+RPA LRGLSIELELVRVEN I+KPGPVFTA+TKAAY+ GANYIYRVNDDSEMHTPWA SFVNA+E
Sbjct: 31 PSATSDPLIAVCAGSTTRGVPFPDEHSLALFRFLLPSLARTADCGFRYLAVVGYDVGDGFFDGAAGKAK--------VARPAALRGLSIELELVRVENAIQKPGPVFTAVTKAAYDRGANYIYRVNDDSEMHTPWARSFVNAIEA 167
BLAST of mRNA_H-canaliculatus_F_contig11810.1605.1 vs. uniprot
Match: A0A7S2MGS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MGS7_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.900e-49 Identity = 95/206 (46.12%), Postives = 124/206 (60.19%), Query Frame = 2
Query: 449 TEECRDMIQTLRIVPNRSWGRASKPQQQRWEILGCNGLVEAAAAAEKSGAGGDGGLRLPDCTARPSAAS-DPLIAVCAGSTTRGVPFPDEQSLALFRFLLPSLARTADCGFRYVAVIGYDVGDGFFDGAAGKAKTLLWFESEVSRPATLRGLSIELELVRVENHIKKPGPVFTAITKAAYELGANYIYRVNDDSEMHTPWAASFVN 1063
T C++ + + P SWGR + +Q W C+ LV A +S A LPDC+A S ++AVC G+TTR V P LALFR+LLPS+A T DCG RY+ V+GYD GD F+D G + WFE + P RG++I L LV+V N +KKPGPVF ITK AY+ GA+YIYRVNDD+EM +PWA F++
Sbjct: 47 TAWCKEAMWKNDVRPGASWGRLTVKEQAEWGRKQCDQLVTEKAMFVRSEA-------LPDCSAGSGDVSRQEVVAVCCGTTTRKVTGPQISKLALFRYLLPSIAHTVDCGLRYMVVVGYDKGDPFYDTYHGLTQVENWFEQHMQVPLAQRGVNISLRLVKVVNTLKKPGPVFNTITKYAYDEGADYIYRVNDDTEMASPWAKKFIS 245
BLAST of mRNA_H-canaliculatus_F_contig11810.1605.1 vs. uniprot
Match: A0A7S2WUR4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUR4_9STRA) HSP 1 Score: 181 bits (460), Expect = 4.120e-47 Identity = 96/209 (45.93%), Postives = 127/209 (60.77%), Query Frame = 2
Query: 458 CRDMIQTLRIVPNRSWGRASKPQQQRWEILGCNGLVEAA-----AAAEKSGAGGDGGLRLPDCTARPSAASDPLIAVCAGSTTRGVPFPDEQSLALFRFLLPSLARTADCGFRYVAVIGYDVGDGFFDGAAGKAKTLLWFESEVSRPATLRGLSIELELVRVENHIKKPGPVFTAITKAAYELGANYIYRVNDDSEMHTPWAASFVNAL 1069
C+ ++V +SWG SK ++RW C+ V ++ A K+G ++ + PLIAV GSTTR V P +LALF +LLPSLARTADCGFRY+ VIG+D GD F+D +GK + WFE + R L + L+LVR+ NH+KKPGPVFT IT+AAY GA+YIYRVNDD+E+ PWA+ FV+ L
Sbjct: 167 CQAAATRHQVVVGQSWGSLSKDDRRRWTKRDCDMFVRSSNGGGGRAPRKAGPAPGSAVKPREDVCPNDGDKKPLIAVACGSTTRKVMSPSTSNLALFTYLLPSLARTADCGFRYMVVIGFDKGDPFWDTLSGKLQAENWFEQNLVHVFNKRHLQVSLKLVRLVNHLKKPGPVFTEITRAAYNEGADYIYRVNDDTELLNPWASLFVSTL 375
BLAST of mRNA_H-canaliculatus_F_contig11810.1605.1 vs. uniprot
Match: A0A7S2B2S3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B2S3_9STRA) HSP 1 Score: 168 bits (425), Expect = 4.050e-44 Identity = 79/137 (57.66%), Postives = 99/137 (72.26%), Query Frame = 2
Query: 659 PLIAVCAGSTTRGVPFPDEQSLALFRFLLPSLARTADCGFRYVAVIGYDVGDGFFDGAAGKAKTLLWFESEVSRPATLRGLSIELELVRVENHIKKPGPVFTAITKAAYELGANYIYRVNDDSEMHTPWAASFVNAL 1069
PL+AVC G+TTR V P LALFR+LLPS+A T DCGF YVAV+GYD GD F+D GK + WF ++ P + RGL++ L+LV+ +N +KKPGPVF ITK AY++GA+YIYRVNDD+EM PWA FV L
Sbjct: 35 PLVAVCCGTTTRKVDQPAISKLALFRYLLPSMAHTLDCGFEYVAVVGYDKGDQFYDTLHGKLQVEQWFLDKIQGPLSERGLTVRLDLVQCDNKLKKPGPVFNIITKHAYDVGADYIYRVNDDTEMAAPWAHRFVTKL 171
BLAST of mRNA_H-canaliculatus_F_contig11810.1605.1 vs. uniprot
Match: F0YNX4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNX4_AURAN) HSP 1 Score: 168 bits (425), Expect = 5.660e-42 Identity = 101/222 (45.50%), Postives = 121/222 (54.50%), Query Frame = 2
Query: 452 EECRDMIQTLRIVPNRSWGRASKPQQQRWEILGCNGLVE---------AAAAAEKSGAGGDGGLRLPDCTARPSAASDPLIAVCAGSTTRG-----VPFPDE-QSLALFRFLLPSLARTADCGFRYVAVIGYDVGDGFFDGAAGKAKTLLWFESEVSRPATLRGLSIELELVRVENHIKKPGPVFTAITKAAY-ELGANYIYRVNDDSEMHTPWAASFVNAL 1069
+ECR M+ + P SWG Q+RW L C+GLV+ AA A KS + L C S PL+AVC G+TTRG P PD + LA+F LLPS RT DCGFRY V+GYDVGD F+D G WF+ V + EL V+N IKKPGPVFTAIT+ AY E A+YIYRVNDD+E+ T WA FV AL
Sbjct: 192 DECRAMMAKHSVAPGSSWGSLGPNGQRRWGSLRCDGLVKGAKNTPSKAAADRARKSTLPSSRQVTLETCPK--STEPLPLVAVCCGTTTRGKGGWITPRPDALEELAVFDHLLPSFVRTVDCGFRYAVVLGYDVGDKFWDLGDGATLARAWFDENVKSVLAAANVEAELRFAVVDNKIKKPGPVFTAITRHAYYEAKADYIYRVNDDTELATRWAKHFVAAL 411
BLAST of mRNA_H-canaliculatus_F_contig11810.1605.1 vs. uniprot
Match: F0YNU3_AURAN (Nudix hydrolase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNU3_AURAN) HSP 1 Score: 170 bits (431), Expect = 7.900e-42 Identity = 97/215 (45.12%), Postives = 126/215 (58.60%), Query Frame = 2
Query: 452 EECRDMIQTLRIVPNRSWGRASKPQQ--QRWEILGCNGLVEAAAAAEKSGAGGDGGLRLPDCTARPSAASDPLIAVCAGSTTRG-----VPFPDE-QSLALFRFLLPSLARTADCGFRYVAVIGYDVGDGFFDGAAGKAKTLLWFESEVSRPATLRGLSIELELVRVENHIKKPGPVFTAITKAAYELG-ANYIYRVNDDSEMHTPWAASFVNAL 1069
EEC + T + P +WG + +RW+ LGC G+VE AA A P SA PLIAVC+G+TTR P P + LA F++LLPS RTA+CGFRY+ V+ YDVGD F+D G A+ WFE+ ++ P + +EL V+V+N +KKPGPVF A+T+AAY A+YIYRVNDD+E T WA FVNAL
Sbjct: 378 EECFALQATHGVKPAMTWGTLDRNPSSFRRWKELGCGGVVERAANAAXXXXXXXXREVCPK-----SADPKPLIAVCSGTTTRQKGGWITPRPGHLEDLAAFQYLLPSFKRTAECGFRYLVVLAYDVGDQFWDRGDGVARARAWFEASIATPLAAANMDVELRFVKVDNAVKKPGPVFAAMTRAAYAAWKADYIYRVNDDTEFKTKWARPFVNAL 587
BLAST of mRNA_H-canaliculatus_F_contig11810.1605.1 vs. uniprot
Match: A0A8J2WXY5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXY5_9STRA) HSP 1 Score: 164 bits (416), Expect = 8.420e-41 Identity = 89/212 (41.98%), Postives = 122/212 (57.55%), Query Frame = 2
Query: 452 EECRDMIQTLRIVPNRSWGRASKPQQQRWEILGCNGLVEAAAAAEKSGAGGDGGLRLPDC-TARPSAASDPLIAVCAGSTTRG----VPFPDEQSLALFRFLLPSLARTADCGFRYVAVIGYDVGDGFFDGAAGKAKTLLWFESEVSRPATLRGLSIELELVRVENHIKKPGPVFTAITKAA-YELGANYIYRVNDDSEMHTPWAASFVNAL 1069
+EC M+Q ++P +WG Q+RW L C+GLV + A + +P+ T PS + PLIA+C G+TTRG + LA+F LLPS RT +CGFRYV V+GYD+GD ++D G + WF+ + + + +EL V+N +KKPGPVFT IT+ A YE A+YIYRVNDD+E+ T WA FV AL
Sbjct: 168 DECAFMMQKHSVIPGANWGSLGPNGQRRWTKLRCDGLV----GGSRVRAPPPRHINVPELETCPPSTQNQPLIALCCGTTTRGKQGWITPQRLDDLAVFHHLLPSFHRTVECGFRYVVVLGYDIGDRWWDLGGGAEQGRRWFQENIKSQLAAKNVQVELRYAVVDNKVKKPGPVFTGITREAFYEAKADYIYRVNDDTELATRWAKHFVEAL 375
BLAST of mRNA_H-canaliculatus_F_contig11810.1605.1 vs. uniprot
Match: A0A812R5F6_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R5F6_SYMMI) HSP 1 Score: 155 bits (391), Expect = 3.420e-39 Identity = 75/137 (54.74%), Postives = 93/137 (67.88%), Query Frame = 2
Query: 659 PLIAVCAGSTTRGVPFPDEQSLALFRFLLPSLARTADCGFRYVAVIGYDVGDGFFDGAAGKAKTLLWFESEVSRPATLRGLSIELELVRVENHIKKPGPVFTAITKAAYELGANYIYRVNDDSEMHTPWAASFVNAL 1069
PLIA+ A +TTR V P Q +ALF LLPSL R+ DCG+RYV V+GYDVGD F+D AG + WF +++ P G+SI L+ V+V N +KKPGPVF A+ K AYELGANY YRVNDD+E W +V AL
Sbjct: 39 PLIAIMAATTTRRVKQPHVQKIALFTLLLPSLIRSLDCGYRYVYVMGYDVGDPFYDSEAGMQEVQAWFARQIAEPMRRNGISITLKPVKVFNPLKKPGPVFVAMAKPAYELGANYFYRVNDDTEFRGRWPKLYVKAL 175
BLAST of mRNA_H-canaliculatus_F_contig11810.1605.1 vs. uniprot
Match: A0A482STA7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STA7_9ARCH) HSP 1 Score: 152 bits (383), Expect = 8.040e-38 Identity = 79/197 (40.10%), Postives = 110/197 (55.84%), Query Frame = 2
Query: 485 IVPNRSWGRASKPQQQRWEILGCNGLVEAAAAAEKSGAGGDGGLRLPDCTARPSAASD-PLIAVCAGSTTRGVPFPDEQSLALFRFLLPSLARTADCGFRYVAVIGYDVGDGFFDGAAGKAKTLLWFESEVSRPATLRGLSIELELVRVENHIKKPGPVFTAITKAAYELGANYIYRVNDDSEMHTPWAASFVNALE 1072
+ P +SWG S + W+ C+ + A K + +CTA D P+IAV A STTR + P ++ALF +LLPSL RT DCGFR+ +GYD GD ++D A+G + W + V +P R +S E +RV N +KKPGPVF + +AAY+ GA Y YR+NDD+E+ W +FV LE
Sbjct: 5 VQPMKSWGSMSPGVIEEWKKNRCDIVFTIQRMARKP---------VSNCTAYSGLGKDLPMIAVMAASTTRNIKEPSPTTMALFTYLLPSLMRTLDCGFRFEYYLGYDQGDVYYDDASGMQEATSWIDKNVKQPLANRKISFEFRPIRVHNTVKKPGPVFLEMARAAYKNGAAYFYRINDDTELLGTWPKAFVRTLE 192 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11810.1605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11810.1605.1 >prot_H-canaliculatus_F_contig11810.1605.1 ID=prot_H-canaliculatus_F_contig11810.1605.1|Name=mRNA_H-canaliculatus_F_contig11810.1605.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=208bp MIQTLRIVPNRSWGRASKPQQQRWEILGCNGLVEAAAAAEKSGAGGDGGLback to top mRNA from alignment at H-canaliculatus_F_contig11810:590..3923+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11810.1605.1 ID=mRNA_H-canaliculatus_F_contig11810.1605.1|Name=mRNA_H-canaliculatus_F_contig11810.1605.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3334bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11810:590..3923+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11810:590..3923+ >mRNA_H-canaliculatus_F_contig11810.1605.1 ID=mRNA_H-canaliculatus_F_contig11810.1605.1|Name=mRNA_H-canaliculatus_F_contig11810.1605.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1248bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11810:590..3923+ (Hapterophycus canaliculatus Oshoro5f female)back to top |