mRNA_H-canaliculatus_F_contig11668.1474.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11668.1474.1
Unique NamemRNA_H-canaliculatus_F_contig11668.1474.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A6H5JN40_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN40_9PHAE)

HSP 1 Score: 319 bits (818), Expect = 4.620e-100
Identity = 155/178 (87.08%), Postives = 169/178 (94.94%), Query Frame = 1
Query:    1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGRTPEGARYVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSMLGMLSERV 534
            DDDAAMAASQVIEAVSTVLQST+AVPELFPAMESHLLPMLAQ+FSEDGDL+EYIENACDVLSFLTYYG GIS+QLWSVFPMLYRTWDKWAFDLISN+AVPIDNY+SRGTDVF+ GR+ EG RY+EMLLDMC RV+KD RQ+EKEARTA QL+MVVLHNCKGRIDEY+P +L MLSERV
Sbjct:  611 DDDAAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDLIEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGDRYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIPPILAMLSERV 788          
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A6U2DQK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2DQK1_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.690e-44
Identity = 75/174 (43.10%), Postives = 115/174 (66.09%), Query Frame = 1
Query:    1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGR--TPEGAR--YVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSM 510
            DDDAAMAA+Q +E V+TVL+     PEL+ +ME  L+P+  QI   DG+ +EY+E A D+L+FLTY+   IS QLW  FP++Y  +D+WAFD ++ +  P++N++ +    F++G   TP+GA   Y++++  M  + + + R +E E R A  L M VLHNC+G +D Y+P M
Sbjct:   82 DDDAAMAAAQCLECVATVLKGICERPELYKSMEPQLVPLCLQILGNDGEYIEYLEYALDILTFLTYFPDEISPQLWEAFPLIYVAFDQWAFDYLNLMVPPLENFIGKSPRQFLQGTATTPDGATVSYIDLVFSMVAKTVAEERSSESECRKAVSLYMSVLHNCRGLVDAYLPMM 255          
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A835YT27_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT27_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.070e-42
Identity = 83/192 (43.23%), Postives = 120/192 (62.50%), Query Frame = 1
Query:    1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGRTPEGARYVEMLLDMCQR--------------VLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSMLGMLSERV 534
            DDDAAMAA Q +EAV+TVL S    P L+PAME  L+PML  I S DG+ +EY ENA +V++        +S  LWS FP+L+  +DKWA D ++N+  PI+N++SR +  +  G TP+G  YV ++++M +               VL D RQTE E +  AQLL   LHNC+G +D +VP++L +++ R+
Sbjct:  614 DDDAAMAAGQCMEAVTTVLHSAHRTPNLYPAMEECLMPMLRTILSNDGEYIEYFENAVEVIA------AHVSPTLWSTFPLLFDAFDKWAADYVTNIRTPIENFISRDSKTYACGATPQGVPYVTLVVNMARAXXXXXXXXXXXXHAVLADQRQTEAEGKAVAQLLSSTLHNCRGLVDAHVPAVLDIVAARM 799          
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A7S0C708_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C708_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.800e-41
Identity = 65/165 (39.39%), Postives = 113/165 (68.48%), Query Frame = 1
Query:    7 DAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGRTPEGARYVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYV 501
            D+AMAA+Q +E ++TVL+     P+LF  +E +L+P++ +I   DG+ +EY+E A D+L+FLTY+   +S QLW  FP++Y+++D++AFD +S + +P++N++ +  D F+   T +G +Y++++  +  R L + R +E E R A  L M VLHNC G++D Y+
Sbjct:    1 DSAMAAAQCLECIATVLKGICMRPDLFKHLEPNLIPIILKILGNDGEFIEYLEYALDILTFLTYFPTELSPQLWEAFPLIYQSFDQYAFDYLSLMVMPLENFIGKSPDYFLAAVTSDGVKYIDLIFKIVGRTLAEDRSSESECRKALSLYMTVLHNCNGKVDSYL 165          
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A7S4RDK4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RDK4_9STRA)

HSP 1 Score: 156 bits (395), Expect = 6.010e-41
Identity = 72/173 (41.62%), Postives = 116/173 (67.05%), Query Frame = 1
Query:    1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGR--TPEG-ARYVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSM 510
            DDDAAMAA+Q +E ++TVL+     PEL+  ME  L+P++ QI   DG+ +EY+E A D+L+FLTY+   IS +LW  FP++Y  +D+WAFD ++ +  P++N++ +    F+ G   TPEG  +Y+E++  +  + + + R +E E+R A  L M +LHNC+G++D Y+P M
Sbjct:  674 DDDAAMAAAQCLECIATVLKGICERPELYRTMEPQLIPLVLQILGNDGEYIEYLEYALDILTFLTYFPDHISPELWQAFPLIYIAFDQWAFDYLNLMVPPLENFIGKAPQQFLAGTASTPEGEVKYIELVFSIVAKTVAEERSSESESRKALSLYMSILHNCRGQVDLYLPMM 846          
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A7S4MVL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVL2_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.280e-39
Identity = 72/174 (41.38%), Postives = 114/174 (65.52%), Query Frame = 1
Query:    1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGR--TPEGAR--YVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSM 510
            DDDAA+AA+Q +E V+TVL+     PEL+ +ME  L+P+  QI   DG+ +EY+E A D+L+FLTY+   IS +LW  FP++Y  +D+WAFD ++ +  P++N++ +    F++G   TP+G    Y++++  M  + + + R +E E R A  L M VLHNC+G +D Y+P M
Sbjct:  666 DDDAALAAAQCLECVATVLKGICERPELYKSMEPQLVPLCLQILGNDGEYIEYLEYALDILTFLTYFPEEISPRLWEAFPLIYVAFDQWAFDYLNLMVPPLENFIGKSPTQFLQGTATTPDGTSVSYIDLVFSMVAKTVAEERSSEPECRKALSLYMSVLHNCRGLVDAYLPMM 839          
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A7S1VG73_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VG73_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.380e-38
Identity = 70/185 (37.84%), Postives = 122/185 (65.95%), Query Frame = 1
Query:    1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGRT--PEG-ARYVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSM----LGMLSERV 534
            DDDAAMAA+Q +E ++TVL+     PEL+ ++E  L+P++  I   DG+ +EY+E A D+L+FLTY+   I+ +LW  FP++Y+ +D+WA+D +S +  P+ +++++  ++F+ G+   PEG + Y++M+  M  + + + R TE E R A  L M +LH+C G+ID  +P +    LG L +++
Sbjct:  227 DDDAAMAAAQCLECIATVLKGICEKPELYKSLEPTLIPLILTILGNDGNFIEYLECALDILTFLTYFPEEITPELWQAFPLIYQAFDQWAYDYLSLMVPPLQSFIAKNPNIFLTGQANLPEGPSTYIDMVFQMVAKTVANDRSTESEVRQALTLFMSILHSCPGQIDPLLPVINELVLGKLGQQI 411          
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: L8GGA7_ACACA (Importin beta domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GGA7_ACACA)

HSP 1 Score: 149 bits (375), Expect = 2.900e-38
Identity = 72/178 (40.45%), Postives = 118/178 (66.29%), Query Frame = 1
Query:    1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGRTPEGARYVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVPSMLGMLSERV 534
            DD AAMAA++ + A+ T+L S    P+LFP +E  L+P+L ++   D D ME++E    ++++LT+YG GIS  +W +FP+LY+ +D WA D +  + +P+DNY+SRG DVF+    P+   Y++M+L M Q+++ D    + +A   A+L+ VV   C+GRIDEYVP ++ +  +R+
Sbjct:  587 DDAAAMAATECLGAIETILDSITKTPDLFPQVEPLLVPLLVRLL--DDDAMEFMEETLKIMAYLTFYGRGISPAMWQLFPLLYKAFDGWATDWMDQIIIPLDNYISRGNDVFLAN--PD---YLKMVLSMYQKLIGDTGVADVDAGEGAKLIEVVFQQCRGRIDEYVPGIIELAVKRL 757          
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: A0A7S3LFB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFB3_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.160e-37
Identity = 69/171 (40.35%), Postives = 112/171 (65.50%), Query Frame = 1
Query:    1 DDDAAMAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEG--RTPEGA-RYVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVVLHNCKGRIDEYVP 504
            DDDAA+AA+Q +E ++TVL+       +   +E  LLP++ +I   DGD +EY+E+A D+LSFLTY+   IS ++W  FP++Y  +D+WA+D ++ +   I +Y+S+G DVF+ G    PEG   Y+++++ M  + L + R +E E R A  L M +L++C GRI+ Y+P
Sbjct:   97 DDDAALAAAQCLECIATVLKGVCGKESMIRVLEPMLLPLVLKILGNDGDFIEYLESALDILSFLTYFQSQISMEVWQCFPLIYMAFDQWAYDYLNMMVPCIQSYISKGPDVFLAGVAHLPEGQISYLDLVVSMVTKTLTNDRASEVECRFALSLFMTILNHCPGRINPYLP 267          
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Match: D8LU38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU38_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.160e-36
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 1
Query:  151 MEYIENACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYVSRGTDVFVEGRTPEG 360
            MEYI+NA DVL FLTYYG GIS+QLWSVFPMLYRTWDKWAFDLISN+AVPIDNY+SRGTDVF+ GR+ EG
Sbjct:    1 MEYIQNAWDVLRFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEG 70          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11668.1474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JN40_9PHAE4.620e-10087.08Importin N-terminal domain-containing protein n=2 ... [more]
A0A6U2DQK1_9STRA2.690e-4443.10Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A835YT27_9STRA1.070e-4243.23Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A7S0C708_9STRA1.800e-4139.39Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4RDK4_9STRA6.010e-4141.62Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4MVL2_9STRA1.280e-3941.38Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S1VG73_9STRA1.380e-3837.84Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
L8GGA7_ACACA2.900e-3840.45Importin beta domain containing protein n=1 Tax=Ac... [more]
A0A7S3LFB3_9STRA1.160e-3740.35Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
D8LU38_ECTSI1.160e-3684.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11668contigH-canaliculatus_F_contig11668:1869..3486 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score311.6
KEGG Pathwayko04013,map04013
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005049,GO:0005215,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0005829,GO:0006403,GO:0006405,GO:0006406,GO:0006606,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016021,GO:0016043,GO:0016441,GO:0016458,GO:0017038,GO:0017076,GO:0019001,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0023052,GO:0031047,GO:0031224,GO:0031503,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0034622,GO:0035194,GO:0035195,GO:0035280,GO:0035639,GO:0036094,GO:0040029,GO:0042886,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048519,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0061608,GO:0065003,GO:0065007,GO:0070013,GO:0070727,GO:0070922,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0072594,GO:0097159,GO:0097367,GO:0140104,GO:0140142,GO:1901265,GO:1901363
EggNOG free text desc.Ran GTPase binding
EggNOG OGsCOG4581@1,KOG1991@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-16_000100.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionExportin/Importin, Cse1-like
Ec32 orthologEc-15_000580.3
Exons4
Model size534
Seed ortholog evalue2.3e-82
Seed eggNOG ortholog2880.D8LDH6
Preferred nameNMD5
KEGG koko:K20223
KEGG TC1.I.1
Cds size519
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11668.1474.1prot_H-canaliculatus_F_contig11668.1474.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11668 1869..3471 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928858.7401054-CDS-H-canaliculatus_F_contig11668:1868..20371622928858.7401054-CDS-H-canaliculatus_F_contig11668:1868..2037Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11668 1869..2037 -
1696845591.7977488-CDS-H-canaliculatus_F_contig11668:1868..20371696845591.7977488-CDS-H-canaliculatus_F_contig11668:1868..2037Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11668 1869..2037 -
1622928858.7678494-CDS-H-canaliculatus_F_contig11668:2170..23321622928858.7678494-CDS-H-canaliculatus_F_contig11668:2170..2332Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11668 2171..2332 -
1696845591.810682-CDS-H-canaliculatus_F_contig11668:2170..23321696845591.810682-CDS-H-canaliculatus_F_contig11668:2170..2332Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11668 2171..2332 -
1622928858.7813492-CDS-H-canaliculatus_F_contig11668:2764..28411622928858.7813492-CDS-H-canaliculatus_F_contig11668:2764..2841Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11668 2765..2841 -
1696845591.819213-CDS-H-canaliculatus_F_contig11668:2764..28411696845591.819213-CDS-H-canaliculatus_F_contig11668:2764..2841Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11668 2765..2841 -
1622928858.7994423-CDS-H-canaliculatus_F_contig11668:3360..34711622928858.7994423-CDS-H-canaliculatus_F_contig11668:3360..3471Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11668 3361..3471 -
1696845591.8282328-CDS-H-canaliculatus_F_contig11668:3360..34711696845591.8282328-CDS-H-canaliculatus_F_contig11668:3360..3471Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11668 3361..3471 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928858.8138587-UTR-H-canaliculatus_F_contig11668:3471..34861622928858.8138587-UTR-H-canaliculatus_F_contig11668:3471..3486Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11668 3472..3486 -
1696845591.844725-UTR-H-canaliculatus_F_contig11668:3471..34861696845591.844725-UTR-H-canaliculatus_F_contig11668:3471..3486Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11668 3472..3486 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11668.1474.1

>prot_H-canaliculatus_F_contig11668.1474.1 ID=prot_H-canaliculatus_F_contig11668.1474.1|Name=mRNA_H-canaliculatus_F_contig11668.1474.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=173bp
MAASQVIEAVSTVLQSTRAVPELFPAMESHLLPMLAQIFSEDGDLMEYIE
NACDVLSFLTYYGPGISQQLWSVFPMLYRTWDKWAFDLISNLAVPIDNYV
SRGTDVFVEGRTPEGARYVEMLLDMCQRVLKDPRQTEKEARTAAQLLMVV
LHNCKGRIDEYVPSMLGMLSERV
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mRNA from alignment at H-canaliculatus_F_contig11668:1869..3486-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11668.1474.1 ID=mRNA_H-canaliculatus_F_contig11668.1474.1|Name=mRNA_H-canaliculatus_F_contig11668.1474.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1618bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11668:1869..3486- (Hapterophycus canaliculatus Oshoro5f female)
GACGACGACGCTGCCATGGCGGCCAGCCAGGTGATCGAGGCTGTGTCAAC CGTCCTGCAGAGCACGAGAGCGGTACCGGAGCTCTTTCCGGCAATGGAGT CGCACCTCTTGCCCATGCTCGCACAGGTGCGTTTGTGTTGTTGCTGCTGT TGATGACGTCGTTCTTGTTCTTGTTCTTGTTCTTGTTGTTGCGACGTTTA GGGATGACAATAATTCCGTTGCCTCTGTCTTTGCTAACGCTGGTGCGACT GCTGCCATCTCCACGGTCGAAACCGGCGCAACTCCTCTCTCCCTGCTCTT CATAATTCCGTAATTTCGCACCTTCCAGCCTGTAGTCAAGCACACACGTC CAAAAATGGTCATGACGCATTGAAAGAAAGAGTATTCAAAGAAAGACATG ACAACACTGTGGAACACCTCCTGAAGTACGTTGTGAGAGGCGTAGCTCGA GGCTTCGGTTGAGCTCCAAATAATGAGGGTTCATTGATGTGTAAGGTTGG GACAACACCATGGAACAGAACAGAGTTTTGTGTAGCTAGCCGCAATTTCA TCTAATAACGTACTTTATCACCCACCGGACGCACGGCCATGCCACCTCCT TTGGTTTGGTTGTCCGCCACGATTGTGTCTTTTCTTTTTTGTCAGATTTT TTCGGAGGATGGAGACTTGATGGAGTACATCGAGAATGCCTGCGACGTCC TCAGCTTCCTCACCTACTATGGGTAAGCTGTCACTGCTGTTTAGGAGTGC CGTCATTTATGTGTTGATTCTTTATCATTTCTGTTGTGCTTCACGGAGCC GAGACGAGTATTTGGATGGGTGTGCACGAAGGGTCCCAAGTTTGAGGTTT GTCGTTTTCTCCGGGATGGGGTGGGTCTCGTTTGGGGCATAAGCGGGCTC CCCTTTCATCGCGCGTGGGCGCGTGCGCTCCCTCTGGTCTGACTACCCTG CGTCTCGTGTCGGTGGCATGATTTCGGCTGGACGGGAGCGCATCGGTACA GTGGCATCGGTGGCGCAAAGGCAGCAAACTGCCGTCTAACGACCATTTGC AAGATGCCTGATTTGGCGCTTGAGTTGACGACCCGTTCGCCTGCCTGAGG CCCGTCCTCCCGGCGTTCCCTCCCCTTCTTGCTCTCCCTGCGTGCGCAAT CCAGGCCCGGGATCAGCCAGCAGCTGTGGAGCGTGTTCCCGATGCTCTAC CGCACGTGGGACAAGTGGGCATTCGATCTCATCTCGAACCTGGCCGTTCC GATCGACAACTACGTCAGCCGCGGGACCGACGTTTTCGTCGAAGGGCGAA CTCCGGAGGGCGCCAGGTGATGGTTTTTGCTGATGGTGGTGTTCGTGGTG GTGGAGGCCTATCGGTGTATTTTTTTTGTCGTCATCCTGACGGCAGCAAT TTTACAAGCGGCGATCGCTTATCGACGCGGACGAACGGACTGACGGCAGG TATGTTGAGATGTTGCTGGACATGTGCCAGCGCGTGCTCAAGGACCCTCG GCAGACGGAGAAGGAAGCCAGAACGGCGGCGCAGCTGCTGATGGTGGTGC TGCACAATTGCAAGGGCAGGATCGACGAGTACGTGCCCTCGATGCTGGGG ATGCTCAGCGAGCGCGTG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11668:1869..3486-

>mRNA_H-canaliculatus_F_contig11668.1474.1 ID=mRNA_H-canaliculatus_F_contig11668.1474.1|Name=mRNA_H-canaliculatus_F_contig11668.1474.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1038bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11668:1869..3486- (Hapterophycus canaliculatus Oshoro5f female)
ATGGCGGCCAGCCAGGTGATCGAGGCTGTGTCAACCGTCCTGCAGAGCAC
GAGAGCGGTACCGGAGCTCTTTCCGGCAATGGAGTCGCACCTCTTGCCCA
TGCTCGCACAGATGGCGGCCAGCCAGGTGATCGAGGCTGTGTCAACCGTC
CTGCAGAGCACGAGAGCGGTACCGGAGCTCTTTCCGGCAATGGAGTCGCA
CCTCTTGCCCATGCTCGCACAGATTTTTTCGGAGGATGGAGACTTGATGG
AGTACATCGAGAATGCCTGCGACGTCCTCAGCTTCCTCACCTACTATGGA
TTTTTTCGGAGGATGGAGACTTGATGGAGTACATCGAGAATGCCTGCGAC
GTCCTCAGCTTCCTCACCTACTATGGGCCCGGGATCAGCCAGCAGCTGTG
GAGCGTGTTCCCGATGCTCTACCGCACGTGGGACAAGTGGGCATTCGATC
TCATCTCGAACCTGGCCGTTCCGATCGACAACTACGTCAGCCGCGGGACC
GACGTTTTCGTCGAAGGGCGAACTCCGGAGGGCGCCAGGCCCGGGATCAG
CCAGCAGCTGTGGAGCGTGTTCCCGATGCTCTACCGCACGTGGGACAAGT
GGGCATTCGATCTCATCTCGAACCTGGCCGTTCCGATCGACAACTACGTC
AGCCGCGGGACCGACGTTTTCGTCGAAGGGCGAACTCCGGAGGGCGCCAG
GTATGTTGAGATGTTGCTGGACATGTGCCAGCGCGTGCTCAAGGACCCTC
GGCAGACGGAGAAGGAAGCCAGAACGGCGGCGCAGCTGCTGATGGTGGTG
CTGCACAATTGCAAGGGCAGGATCGACGAGTACGTGCCCTCGATGCTGGG
GATGCTCAGCGAGCGCGTGGTATGTTGAGATGTTGCTGGACATGTGCCAG
CGCGTGCTCAAGGACCCTCGGCAGACGGAGAAGGAAGCCAGAACGGCGGC
GCAGCTGCTGATGGTGGTGCTGCACAATTGCAAGGGCAGGATCGACGAGT
ACGTGCCCTCGATGCTGGGGATGCTCAGCGAGCGCGTG
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