mRNA_H-canaliculatus_F_contig11642.1449.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11642.1449.1
Unique NamemRNA_H-canaliculatus_F_contig11642.1449.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig11642.1449.1 vs. uniprot
Match: D7FKY3_ECTSI (Outer dynein arm docking complex protein oda-dc n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKY3_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 3.910e-104
Identity = 192/242 (79.34%), Postives = 198/242 (81.82%), Query Frame = 1
Query:    4 KLCQTLMKASTLDAANVRRKECVNSLRREKMAEVKGLKRLEAELERARVVYASTTRATQQMIDDKEKTRREIEVLKQEVVKDLEAFREGFQGMTESLAAAKEATQESNAKLEFMTRSRAAGLGEDDEGEQPGHGPGGGATSITTGPQLGTTGREGARGGEVVQPLSRAKRLHQQSIMSFWLILKKKNDLHAKAARVQELRAMLEKISAATSLATLDDFVPVMLEAEDENYNLFKLINELNKE 729
            +L QTLMKAS LDAAN RRKECVNSLRREKMAEVK  KRL AELERAR + ASTTRATQQM+DDKEKTRREIEVLKQEVVKDLE+FRE FQGMTESLAAAKEATQESNAKLE+MTRSR  G GED+EGE                         G  G   VQPLSRAKRLHQQSIMSFWLILKKKNDL AKAARVQELRAMLEKISAATSL TLDDFVPVMLEAEDENYNLFKLINELNKE
Sbjct:  156 RLQQTLMKASMLDAANARRKECVNSLRREKMAEVKAQKRLVAELERARAICASTTRATQQMVDDKEKTRREIEVLKQEVVKDLESFREEFQGMTESLAAAKEATQESNAKLEYMTRSRPPGAGEDEEGESX-------XXXXXXXXXXXXXXXGGPPGAGEVQPLSRAKRLHQQSIMSFWLILKKKNDLQAKAARVQELRAMLEKISAATSLTTLDDFVPVMLEAEDENYNLFKLINELNKE 390          
BLAST of mRNA_H-canaliculatus_F_contig11642.1449.1 vs. uniprot
Match: A0A835Z6M1_9STRA (Plastocyanin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M1_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.480e-30
Identity = 95/253 (37.55%), Postives = 141/253 (55.73%), Query Frame = 1
Query:    4 KLCQTLMKASTLDAANVRRKECVNSLRREKMAEVKGLKRLEAELERARVVYASTTRATQQMIDDKEKTRREIEVLKQEVVKDLEAFREGFQGMTESLAAAK--EATQESNAKLEFMTRSRAAGLGEDDEGEQPGHGPGGGATSITTGPQLGTTGREGARGGEVVQPLSRAKRLHQQSIMSFWLILKKKNDLHAKAARVQELRAMLEKISAATSLATLDDFVPVMLEAEDENYNLFKLINELNKELEELEHEKS 756
            +L Q L++AS L+  N   K  V+ +RR+K++EV G +R+EA+L   R   A   R TQ   D +E  RRE E L+QE+V+DL AF + ++G+T  L       A  ES+A+L  + R ++                                             ++ + RL QQS+ ++W IL KK+DL AKAAR QEL   L++I AA+   +L++FVP M+EAE+E Y+LF+LINELN+ELEEL+ E++
Sbjct:  134 RLQQALIRASRLENENETLKVEVDRVRRQKLSEVGGRRRVEAQLAALRAQCAELVRRTQAHHDAREGVRRETETLRQEIVRDLHAFSDAYEGVTGQLGGGGGVSAAAESHARLHRLVREQSXXXX---------------XXXXXXXXXXXXXXXXXXXXXXXXGSVTNSMRLKQQSLNAYWAILNKKSDLVAKAARAQELEDALQQICAASQGGSLEEFVPAMVEAEEEGYSLFRLINELNRELEELDAERA 371          
BLAST of mRNA_H-canaliculatus_F_contig11642.1449.1 vs. uniprot
Match: A0A7S1UCH1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCH1_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.280e-10
Identity = 65/257 (25.29%), Postives = 120/257 (46.69%), Query Frame = 1
Query:    4 KLCQTLMKASTLDAANVRRKECVNSLRREKMAEVKGLKRLEAELERARVVYASTTRATQQMIDDKEKTRREIEVLKQEVVKDLEAFREGFQGMTESLAAAKEATQESNAKLEFMTRSRAAGLGEDDEGEQPGHGPGGGATSITTGPQLGTTGREGARGGEVVQPLSRAKRLHQQSIMSFWLILKKKNDLHAKAARVQELRAMLEKISAATSLATLDDFVPVMLEAEDENYNLFKLINELNKELEELEHEKSLLNDEI 774
            KL +TL +       N  + + +N  R EK  +    + ++ EL + R    +     Q  I DK+  +R  E L+ ++ +DL+AF   ++ M   +       ++S    E M+ +                  G GA S     Q G+  R G  G +  +   + + L +     +W I K+K DL      + EL   L+++ ++T +  + + +P++  +E++NY+L+ +IN+L KE+EELE EK  L+ E+
Sbjct:  126 KLDRTLQRLHQKTRLNESKVQEINDYRIEKATQRTVKEGVQRELNQKRDKLKNMLSVAQHCIADKDNVQRATEALRTQISEDLDAFNGEYETMLRDIK------EQSVFNSEIMSNA------------------GRGAHSPFAALQ-GSPNRPGGEGKKDTESGIQLEVLRKSVAKQYWGIAKRKLDLEELDTNIVELEGNLDRLKSSTGVTDVKELIPILQSSEEQNYSLYNMINDLTKEMEELEVEKQTLDKEM 357          
BLAST of mRNA_H-canaliculatus_F_contig11642.1449.1 vs. uniprot
Match: A0A8K1FJT3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJT3_PYTOL)

HSP 1 Score: 68.2 bits (165), Expect = 2.300e-9
Identity = 67/265 (25.28%), Postives = 126/265 (47.55%), Query Frame = 1
Query:    4 KLCQTLMKASTLDAANVRRKECVNSLRREKMAEVKGLKRLEAELERARVVYASTTRATQQMIDDKEKTRREIEVLKQEVVKDLEAFREGFQG----MTESLAAAKEATQESNAKLEF---MTRSRAAGLGEDDEGEQPGHGPGGGATSITTGPQLGTTGREGARGGEVVQPLSRAKRLHQQSIMSFWLILKKKNDLHAKAARVQELRAMLEKISAATSLATLDDFVPVMLEAEDENYNLFKLINELNKELEELEHEKSLLNDEIE 777
            +L + L + + +  AN + ++ + SLRREK+ +    ++LE E  + +   A    ATQ   D +++T R+IE+L+ +V +  E F  G+      + +  A  ++  +    K      M  +R   L  D  G      PG    S+ + P +                     +L  +++ + WL+ +K++DL  ++ R++     L KI   T ++  D+    +L AE +N++LF LIN+LN E+E +E E + L + +E
Sbjct:  110 RLDKVLTRYNEIRNANKKLRDEIQSLRREKVQQQAIQEKLERETHQKQAEIAKVASATQNAFDARDRTNRQIELLRSQVSETDEEFEAGWTEKKMLLDQDRAGIRDIPRLRTPKSPMHSAMPSARGRMLASDLSG------PGSPGFSLLSTPDI---------------------KLRDETMKNVWLLNEKESDLRRQSERLKTAEDGLTKIKKKTGVSDPDELAQALLSAEAKNFSLFNLINDLNTEMEAIEIENNGLEEMVE 347          
BLAST of mRNA_H-canaliculatus_F_contig11642.1449.1 vs. uniprot
Match: A0A5D6Y3C8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3C8_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.400e-8
Identity = 65/260 (25.00%), Postives = 125/260 (48.08%), Query Frame = 1
Query:    4 KLCQTLMKASTLDAANVRRKECVNSLRREKMAEVKGLKRLEAELERARVVYASTTRATQQMIDDKEKTRREIEVLKQEVVKDLEAFREGFQGMTESLAAAKEATQESNAKLEFMTRSRAAGLGEDDEGEQPGHGPGGGATSITTGPQLGTTGREGARGGEVVQPLSRAKRLHQQSIMSFWLILKKKNDLHAKAARVQELRAMLEKISAATSLATLDDFVPVMLEAEDENYNLFKLINELNKELEELEHEKSLLNDEIERL 783
            +L + L + + +  AN   ++ + SLRREK+ + +  ++LE E    +   A  T A Q   D +++  R+ + ++ ++ +D + F  G+          K   ++  A +  + R R                PG  A  +     +G TG   A GG  +      K L  +++ + WL+ +K++DL  ++ R++ +   L KI   T +   ++    ++ AE++N++LF +IN+LN E+E LE E    N+E+E L
Sbjct:  139 RLDKVLTRYNEVRNANKTLRDEIQSLRREKVQQQQVHEKLERETHTKQTEVAKITSAAQSACDARDRANRQADSIRAQLAEDGDEFENGW-------VEKKVQLEQDRANIRDIPRLRTP------------KSPGNRAGRLGASSGVGLTGS--APGGFKLLSTPDVK-LRDETLKNVWLLNEKESDLRRQSERLKAVEDGLTKIKKKTGVQDAEELAKALISAEEKNFSLFNMINQLNTEMEALEIE----NNEVEEL 372          
BLAST of mRNA_H-canaliculatus_F_contig11642.1449.1 vs. uniprot
Match: A0A2D4C681_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C681_PYTIN)

HSP 1 Score: 64.7 bits (156), Expect = 3.340e-8
Identity = 67/259 (25.87%), Postives = 122/259 (47.10%), Query Frame = 1
Query:    4 KLCQTLMKASTLDAANVRRKECVNSLRREKMAEVKGLKRLEAELERARVVYASTTRATQQMIDDKEKTRREIEVLKQEVVKDLEAFREGFQGMTESLAAAKEATQESNAKLEFMTRSRAAGLGEDDEGEQPGHGPGGGATSITTGPQLGTTGREGARGGEVVQPLSRAK-RLHQQSIMSFWLILKKKNDLHAKAARVQELRAMLEKISAATSLATLDDFVPVMLEAEDENYNLFKLINELNKELEELEHEKSLLNDEIE 777
            +L + L + + +  AN + ++ + SLRREK+ +     +LE E  + +   A    ATQ  +D +++  R+ E+L+ ++ +D E F  G+Q         K    +  A +  + R R                P   A     G  L +       G      LS    +L  +++ + WL+ +K+NDL  ++ R++ +   L KI   T ++  ++    +L AE++N++LF LIN+LN E+E +E E + L   IE
Sbjct:  111 RLDKVLTRYNEVRNANKKLRDEIQSLRREKVQQQAIQDKLERETHQKQNEIAKVAGATQNALDSRDRANRQTEMLRAQLHEDDEEFEAGWQEK-------KMIIDQDRANIRDIPRLRTP------------KSPNRHAMPSVRGRLLPSD--LSGTGSPAFSLLSTPDIKLRDETMKNVWLLNEKENDLRRQSERLKTVEDGLTKIKKKTGVSDAEELAQALLTAEEKNFSLFNLINDLNTEMESIEIENNELEQMIE 348          
BLAST of mRNA_H-canaliculatus_F_contig11642.1449.1 vs. uniprot
Match: F0Y881_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y881_AURAN)

HSP 1 Score: 63.5 bits (153), Expect = 8.130e-8
Identity = 66/249 (26.51%), Postives = 112/249 (44.98%), Query Frame = 1
Query:   70 VNSLRREKMAEVKGLKRLEAELERARVVYASTTRATQQMIDDKEKTRREIEVLKQEVVKDLEAFREGFQGMTESLAAAKEATQESNAKLEFMTRSRAAGLGEDDEGEQPGHGPGGGATSITTGPQLGTTGREGARGGEVVQPLSRAKRLHQQSIMSFWLILKKKNDLHAKAARVQELRAMLEKISAATSLAT-------------LDDFVPVMLEAEDENYNLFKLINELNKELEELEHEKSLLNDEIE 777
            +N+ RREK+   +   + E  L R R   A+  RA Q+  +++E+  R+ E LK E++ ++E F +       S+ AA         +    + + A        G  P                     +E ++  EV         L Q+   ++W++ K + DL  +  R +EL +  +KI + T                 L+  VP++L++E+ENY +F+ INELN+ELE LE EK  L D++E
Sbjct:  108 INNKRREKIQHERVTAKAEKSLARRRQQLANLNRALQETEEEREQAGRQCEALKGEIIDEMEQFNDRVSSTHNSIVAA-------TGQCGLSSAASA--------GAAPSSXXXXXXXXXXXXKDRAFLTQERSKQPEVD--------LQQEVNKAYWVVAKTRMDLTKQIERKEELHSAFDKICSETKTHVDPSADPALKGKHPLEGLVPLLLKSEEENYLVFRTINELNQELETLELEKVSLEDDME 333          
BLAST of mRNA_H-canaliculatus_F_contig11642.1449.1 vs. uniprot
Match: A0A662Y8E7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y8E7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.670e-7
Identity = 65/257 (25.29%), Postives = 124/257 (48.25%), Query Frame = 1
Query:    4 KLCQTLMKASTLDAANVRRKECVNSLRREKMAEVKGLKRLEAELERARVVYASTTRATQQMIDDKEKTRREIEVLKQEVVKDLEAFREGFQGMTESLAAAKEATQESNAKLEFMTRSRAAGLGEDDEGEQPGHGPGGGATSITTGPQLGTTGREGARGGEVVQPLSRAKRLHQQSIMSFWLILKKKNDLHAKAARVQELRAMLEKISAATSLATLDDFVPVMLEAEDENYNLFKLINELNKELEELEHEKSLLNDEI 774
            +L + L + + +  AN   +E + +LRREK+ +   L +LE E  +A+       +A+Q   D +++  R+ E L++++ +D + F  G++  T  LA       E  A +  + R R        +     H     AT  ++   + ++G      G      +   +L  ++  + WL+ +K +DLH ++ R++  +  L KI   T        V  +L AE++N++LF +INEL+ E+E LE E + L  ++
Sbjct:  129 RLDKVLTRYNEVCNANKALREQIQALRREKVQQGAVLDKLERETAQAQAEATQMAQASQAAGDARDRANRQSEALRRQLNEDGDDFEAGWREKTGQLA-------EDRATIRDIPRLRTP------KSPSRPHFLNSSATPESSSSPMASSGASRPLPGAFKLLSTPDVKLRDETQKTEWLLQEKASDLHKQSERLRTAQEGLAKIKRKTGEKDPQVLVATLLAAEEKNFSLFNMINELSTEMEALEVENNGLEAQV 372          
BLAST of mRNA_H-canaliculatus_F_contig11642.1449.1 vs. uniprot
Match: A0A485LKB0_9STRA (Aste57867_20700 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKB0_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 8.320e-7
Identity = 60/261 (22.99%), Postives = 120/261 (45.98%), Query Frame = 1
Query:    4 KLCQTLMKASTLDAANVRRKECVNSLRREKMAEVKGLKRLEAELERARVVYASTTRATQQMIDDKEKTRREIEVLKQEVVKDLEAFREGFQGMTESLAAAK---EATQESNAKLEFMTRSRAAGLGEDDEGEQPGHGPGGGATSITTGPQLGTTGREGARGGEVVQPLSRAKRLHQQSIMSFWLILKKKNDLHAKAARVQELRAMLEKISAATSLATLDDFVPVMLEAEDENYNLFKLINELNKELEELEHEKSLLNDEIE 777
            +L + L++ +    AN R +E + +LRREK+ + +  ++L+ EL    +    T + TQ + D +++ +R++E L+ +   +   F   +  + + +   +    A+Q   A   +M        G+DD+                        GRE           +   +L  +++ + WLI  K+ DL  +A R++     L KI   T +  + +    ++ AE++N++LF +INELN E+E +E E +   + I+
Sbjct:   97 RLEKVLIRLNEACNANKRLREQIQNLRREKVQQQQIHEKLDRELHAKHLEVTKTGQMTQNIYDARDRAQRQVEALRLQTADETARFEAEWNDLKDVIEVDRAHLRASQHHGASSMYMD-------GDDDD-----------------------NGRESG---------TPDAKLRDETLKTSWLISAKEADLRKQAERLKAYEDGLAKIRKKTGIKDIGELANALMAAEEKNFSLFNMINELNTEMEAVEIENNRFQEMID 318          
BLAST of mRNA_H-canaliculatus_F_contig11642.1449.1 vs. uniprot
Match: W4FFA6_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFA6_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.670e-6
Identity = 58/257 (22.57%), Postives = 115/257 (44.75%), Query Frame = 1
Query:    4 KLCQTLMKASTLDAANVRRKECVNSLRREKMAEVKGLKRLEAELERARVVYASTTRATQQMIDDKEKTRREIEVLKQEVVKDLEAFREGFQGMTESLAAAKEATQESNAKLEFMTRSRAAGLGEDDEGEQPGHGPGGGATSITTGPQLGTTGREGARGGEVVQPLSRAKRLHQQSIMSFWLILKKKNDLHAKAARVQELRAMLEKISAATSLATLDDFVPVMLEAEDENYNLFKLINELNKELEELEHEKSLLNDEI 774
            +L + L++ +    AN + +E + +LRREK+ + +  ++L+ EL   ++  A TT+ TQ   D +++ +R++E LK +  ++   F   +  +       K   +     L       +  +  DD  ++                 +GT                   +L  +++ + WLI  K+ DL  +  R++     L KI   T +  + +    ++ AE++N++LF +INELN E+E +E E +   D I
Sbjct:   93 RLEKVLIRLNEACNANKKLREQIQNLRREKVQQQQIHEKLDRELHTKQLDVAKTTQLTQSTYDARDRAQRQVEALKLQTAEETARFEADWNEL-------KNVIEVDRVHLRASQHHGSIFVDGDDSQDR----------------DIGTP----------------DAKLRDETLKTSWLISAKEADLRKQTERLKAYEDGLAKIRKKTGIKDIGELANALMSAEEKNFSLFNMINELNTEMEAVEIENNRFQDMI 310          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11642.1449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FKY3_ECTSI3.910e-10479.34Outer dynein arm docking complex protein oda-dc n=... [more]
A0A835Z6M1_9STRA1.480e-3037.55Plastocyanin-like domain-containing protein n=1 Ta... [more]
A0A7S1UCH1_9STRA5.280e-1025.29Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8K1FJT3_PYTOL2.300e-925.28Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y3C8_9STRA1.400e-825.00Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2D4C681_PYTIN3.340e-825.87Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
F0Y881_AURAN8.130e-826.51Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A662Y8E7_9STRA3.670e-725.29Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A485LKB0_9STRA8.320e-722.99Aste57867_20700 protein n=1 Tax=Aphanomyces stella... [more]
W4FFA6_9STRA2.670e-622.57Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11642contigH-canaliculatus_F_contig11642:740..3850 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score333.2
Seed ortholog evalue1.1e-88
Seed eggNOG ortholog2880.D7FKY3
EggNOG OGs2ENQM@1,2SS36@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size798
Cds size798
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11642.1449.1prot_H-canaliculatus_F_contig11642.1449.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11642 740..3850 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928856.340083-CDS-H-canaliculatus_F_contig11642:739..9221622928856.340083-CDS-H-canaliculatus_F_contig11642:739..922Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11642 740..922 +
1696845590.6496139-CDS-H-canaliculatus_F_contig11642:739..9221696845590.6496139-CDS-H-canaliculatus_F_contig11642:739..922Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11642 740..922 +
1622928856.3538218-CDS-H-canaliculatus_F_contig11642:1658..18121622928856.3538218-CDS-H-canaliculatus_F_contig11642:1658..1812Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11642 1659..1812 +
1696845590.6653647-CDS-H-canaliculatus_F_contig11642:1658..18121696845590.6653647-CDS-H-canaliculatus_F_contig11642:1658..1812Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11642 1659..1812 +
1622928856.3672094-CDS-H-canaliculatus_F_contig11642:2239..23741622928856.3672094-CDS-H-canaliculatus_F_contig11642:2239..2374Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11642 2240..2374 +
1696845590.67623-CDS-H-canaliculatus_F_contig11642:2239..23741696845590.67623-CDS-H-canaliculatus_F_contig11642:2239..2374Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11642 2240..2374 +
1622928856.3806472-CDS-H-canaliculatus_F_contig11642:2461..26121622928856.3806472-CDS-H-canaliculatus_F_contig11642:2461..2612Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11642 2462..2612 +
1696845590.6893005-CDS-H-canaliculatus_F_contig11642:2461..26121696845590.6893005-CDS-H-canaliculatus_F_contig11642:2461..2612Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11642 2462..2612 +
1622928856.3939273-CDS-H-canaliculatus_F_contig11642:3114..32201622928856.3939273-CDS-H-canaliculatus_F_contig11642:3114..3220Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11642 3115..3220 +
1696845590.6989605-CDS-H-canaliculatus_F_contig11642:3114..32201696845590.6989605-CDS-H-canaliculatus_F_contig11642:3114..3220Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11642 3115..3220 +
1622928856.4084013-CDS-H-canaliculatus_F_contig11642:3781..38501622928856.4084013-CDS-H-canaliculatus_F_contig11642:3781..3850Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11642 3782..3850 +
1696845590.7093923-CDS-H-canaliculatus_F_contig11642:3781..38501696845590.7093923-CDS-H-canaliculatus_F_contig11642:3781..3850Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11642 3782..3850 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11642.1449.1

>prot_H-canaliculatus_F_contig11642.1449.1 ID=prot_H-canaliculatus_F_contig11642.1449.1|Name=mRNA_H-canaliculatus_F_contig11642.1449.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=266bp
MKLCQTLMKASTLDAANVRRKECVNSLRREKMAEVKGLKRLEAELERARV
VYASTTRATQQMIDDKEKTRREIEVLKQEVVKDLEAFREGFQGMTESLAA
AKEATQESNAKLEFMTRSRAAGLGEDDEGEQPGHGPGGGATSITTGPQLG
TTGREGARGGEVVQPLSRAKRLHQQSIMSFWLILKKKNDLHAKAARVQEL
RAMLEKISAATSLATLDDFVPVMLEAEDENYNLFKLINELNKELEELEHE
KSLLNDEIERLTQVRS
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mRNA from alignment at H-canaliculatus_F_contig11642:740..3850+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11642.1449.1 ID=mRNA_H-canaliculatus_F_contig11642.1449.1|Name=mRNA_H-canaliculatus_F_contig11642.1449.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3111bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11642:740..3850+ (Hapterophycus canaliculatus Oshoro5f female)
ATGAAACTGTGCCAGACGCTGATGAAGGCGAGCACGCTGGACGCGGCTAA CGTTCGGCGGAAAGAGTGCGTCAATAGCCTGAGGAGAGAAAAGATGGCCG AGGTTAAGGGCCTCAAGCGGCTGGAGGCTGAGCTGGAGCGAGCGAGGGTA GTTTACGCGAGTACAACAAGGGCAACACAACAGGTCCGTGTCTTTGTTAG CTGTTGCCTATTCCTAGGCCCTCACTCTTCTTGTACCTTGCGCCGTCGCC CCCCGTAAATACGCCAATCATCAACCCTATGCTTCGAGAAAGTACCGGTA GACCCGAACCCAAAACCCGGCGTCAAAGCTAAAAATATATGGGAGCATGA CGTAATCTCTCTCCTCTCGTCCTTCACATATGATGATGCCTCAGTACGCA CCACCGCCGACTGCTGCCGTCGCTCGCAGGGATCACATCAAAAATCACAT ATCGTGCCGCGCGGTCGGTTGCAGCAGAATCATTCGACTGATGATAGTCC TCAAAATCTTAAAATAAGGCCGTTCCACGCCTCACACCGTCTAGCGAACG TAGCCAGTCGTTCTCCTTTTAACCTCAAGAATTTTCACACGCGCCAACGT TTGCATAAACAATCCAAGCATTTCCGGGCTGCCTCCAAGCCGTTCAGCGA ACTTCCCATACATAACTCCCCCTCATCGAAACCAGTAATAGCTCATCCTA CACTTTTGAATTTTATCATTCCACCCGATTACTTGCGTACATAATATTCA GTACACATGGATAACGTACAAGCATGATAGATGAAGTCAACAACGAAAGC TCAACATGCTCAAGTTATCTCTTCGAACAAAGGGCTACGACACGAACACA ATACCCGAATTTCTACAAAGCGTGTACACGAGGAGTCTGTTTTTCCAAAA GCGGCAACAACTACTACAGATGATCGACGACAAAGAAAAAACTCGGCGAG AGATCGAAGTCCTCAAGCAAGAGGTTGTGAAGGATCTGGAGGCGTTTCGG GAGGGGTTCCAAGGCATGACCGAGAGCCTGGCCGCTGCAAAGGAGGCGAC CCAAGAGAGCAACGCCAAACTAGGTACGAAAACGCCACGAAGGATTCGTG ATATTCTCCAAGGGGCAGGTACTGTACTCCTTTAGCTCCTGACTGACAGC CAGGAGCGAGATTTTTTATGATACGCTGATCATATCGGCTGCGATGCAGC AGCCCCAGCACTCGCGACAGCAGAAGAAACAGCAACAGGAGTAAAAGAGC CAGGACGGTCAGCACCAGAACCGGCAGCAGACAGCTGCCTTTGTCGACAA CTAGATGATAAGGCGATGTTCGCACCACTCCGCTTCTCGACTCGTGTCGA TGCGTTCTTCGGCCGAGCCTGAAACTTCTGACAAGGCGTGCATGGCAAGA GCTGCTTGCTTCTCACGGGCCCCCCGCTCTTACGCTGTCCTCGCTCGTCA CACTTTACCATCCCGCAACAACGCTCGACCACGCAAACGTCTCGTCGCAG AGTTCATGACAAGAAGCCGGGCCGCAGGGCTTGGGGAAGACGATGAAGGA GAGCAGCCCGGGCATGGGCCCGGAGGAGGGGCAACATCAATTACGACCGG GCCGCAACTAGGGACGACGGGGAGGGAGGGGGCAAGTGGGGTCGGAGGCT ACGAAAACAACGGCGGCGGTGCCGATGCATCTCCCGCGGGGGCAGGGGGT ACAAGCGGGGGCAGACTCGGAGGGGGGGGCGAGGTGGTTCAGCCCCTTTC GAGAGCGAAACGTTTACACCAGCAGAGCATCATGTCCTTTTGGCTGATCC TAAAGAAAAAGAATGATTTGCACGCCAAAGCGGCCCGGGTTCAAGAGCTC AGAGCGATGCTAGAGAAGATCAGGTGCGTTCATGTGCTTGCTGCTCGGTT CTGTGAGAATATTATGGCAATCCACATTTTCTCTCATGAGCGAAAGGAGC AGGGAGAGGAGGAGATTGTGCATATCATGGTCTACCCTTTATGGGGCGTG GAGCCTCGCACTCATACACACAGGAGCAGATGTTTGCTGCTGTACAACGA CTCGGCGGCCATGCAAAGCGGTGTAAGTCAGGCTTTTTTTCGTCTTTCAG TTTGTCTGTTCATCGCTTTGCCTGTCTGTGGGAGCTTCGCCGACCAGGCG CGCACGCGAGTCGTCAACAAGGAAGCCTCCAAAATATCGTTGCTGGAAGC ACCTCGAAGAGGTATTGCCTGGCTGCTGTACCTCAGTAGGGCGGTAATAC CAAGCGCTCCTATCAACGCAAGCAGCTGGGGGTCCGGTGGATTCAATCGC ATGAAATGTGTGAAGCACATGGATACCCCAGCCCTCTTTCATACGTGCTT GCGATGTCTCCCTCTCGGGACACAGCGCTGCTACGAGCCTGGCCACCCTC GACGATTTCGTCCCCGTGATGCTTGAAGCCGAGGACGAGAATTACAACCT CTTCAAGCTCATCAACGAGCTCAACAAGGAGGTGCGTCGTCCATCGTGCT TGGCTCCTGTGTGATAGCTCGAGACGTCAAGCAAAGAGCGGGATCGACTC TGGTTCGGATTACGTTGGGGGTAGACAAACATGAAGTGTAACAGGGGACT CGGGATACGCACCGACTCGTCGAAGTCGTTCGCAAACTCAATGAGGAGCT GTGTGTGTCAATGTAGCTGATTTACGATGTTTTTAGACAAAGCAAATGTT AGCGTTGTGGAGAGTGAGATCGAAGAGGAAACGCACGAATACAGACATAT CGAGGACAGGACGATGAAAAACTTCTTCATAGCCTAAAACACCAGCTGGC TCACACAGTAAGAACAAGAACATGAGAGAGGAGGAAAAACAAGACCCTGT GTCGCCGTCTCCCCCTCGACTCACAAAATGAATGCCCATCAAATGCAGAG ACTAGTTGGCTTTTTGTGTGCATAAATGTGCCGGTCCTACACGTACTTAC CGTTGTGGAAACCGTCCTTTATACGGCTATCTTGGTGGCTGACAATGACG ACACCAACAACAACAATGTGGCTGCTGCTGCTGCTGCTGAAGCTGGAGGA GCTCGAGCACGAGAAGAGCCTGCTGAACGATGAAATCGAGCGGCTGACCC AGGTGAGATCA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11642:740..3850+

>mRNA_H-canaliculatus_F_contig11642.1449.1 ID=mRNA_H-canaliculatus_F_contig11642.1449.1|Name=mRNA_H-canaliculatus_F_contig11642.1449.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1596bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11642:740..3850+ (Hapterophycus canaliculatus Oshoro5f female)
ATGAAACTGTGCCAGACGCTGATGAAGGCGAGCACGCTGGACGCGGCTAA
CGTTCGGCGGAAAGAGTGCGTCAATAGCCTGAGGAGAGAAAAGATGGCCG
AGGTTAAGGGCCTCAAGCGGCTGGAGGCTGAGCTGGAGCGAGCGAGGGTA
GTTTACGCGAGTACAACAAGGGCAACACAACAGATGAAACTGTGCCAGAC
GCTGATGAAGGCGAGCACGCTGGACGCGGCTAACGTTCGGCGGAAAGAGT
GCGTCAATAGCCTGAGGAGAGAAAAGATGGCCGAGGTTAAGGGCCTCAAG
CGGCTGGAGGCTGAGCTGGAGCGAGCGAGGGTAGTTTACGCGAGTACAAC
AAGGGCAACACAACAGATGATCGACGACAAAGAAAAAACTCGGCGAGAGA
TCGAAGTCCTCAAGCAAGAGGTTGTGAAGGATCTGGAGGCGTTTCGGGAG
GGGTTCCAAGGCATGACCGAGAGCCTGGCCGCTGCAAAGGAGGCGACCCA
AGAGAGCAACGCCAAACTAGATGATCGACGACAAAGAAAAAACTCGGCGA
GAGATCGAAGTCCTCAAGCAAGAGGTTGTGAAGGATCTGGAGGCGTTTCG
GGAGGGGTTCCAAGGCATGACCGAGAGCCTGGCCGCTGCAAAGGAGGCGA
CCCAAGAGAGCAACGCCAAACTAGAGTTCATGACAAGAAGCCGGGCCGCA
GGGCTTGGGGAAGACGATGAAGGAGAGCAGCCCGGGCATGGGCCCGGAGG
AGGGGCAACATCAATTACGACCGGGCCGCAACTAGGGACGACGGGGAGGG
AGGGGGCAAAGTTCATGACAAGAAGCCGGGCCGCAGGGCTTGGGGAAGAC
GATGAAGGAGAGCAGCCCGGGCATGGGCCCGGAGGAGGGGCAACATCAAT
TACGACCGGGCCGCAACTAGGGACGACGGGGAGGGAGGGGGCAAGGGGGG
GCGAGGTGGTTCAGCCCCTTTCGAGAGCGAAACGTTTACACCAGCAGAGC
ATCATGTCCTTTTGGCTGATCCTAAAGAAAAAGAATGATTTGCACGCCAA
AGCGGCCCGGGTTCAAGAGCTCAGAGCGATGCTAGAGAAGATCAGGGGGG
GGCGAGGTGGTTCAGCCCCTTTCGAGAGCGAAACGTTTACACCAGCAGAG
CATCATGTCCTTTTGGCTGATCCTAAAGAAAAAGAATGATTTGCACGCCA
AAGCGGCCCGGGTTCAAGAGCTCAGAGCGATGCTAGAGAAGATCAGCGCT
GCTACGAGCCTGGCCACCCTCGACGATTTCGTCCCCGTGATGCTTGAAGC
CGAGGACGAGAATTACAACCTCTTCAAGCTCATCAACGAGCTCAACAAGG
AGCGCTGCTACGAGCCTGGCCACCCTCGACGATTTCGTCCCCGTGATGCT
TGAAGCCGAGGACGAGAATTACAACCTCTTCAAGCTCATCAACGAGCTCA
ACAAGGAGCTGGAGGAGCTCGAGCACGAGAAGAGCCTGCTGAACGATGAA
ATCGAGCGGCTGACCCAGGTGAGATCACTGGAGGAGCTCGAGCACGAGAA
GAGCCTGCTGAACGATGAAATCGAGCGGCTGACCCAGGTGAGATCA
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