mRNA_H-canaliculatus_F_contig11615.1425.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11615.1425.1 vs. uniprot
Match: A0A6H5JSV0_9PHAE (TRUD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV0_9PHAE) HSP 1 Score: 103 bits (258), Expect = 8.690e-25 Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = 1 Query: 19 GFVNFFGEQRFGRDGTNNLDVGMLLLGGDWAGAIDRIMAPHPADSTQVAEAKEAF 183 GFVNFFGEQRFGRDGTNNLDVG+ LL GDW GAIDRIMAPHPADS VAEAKEAF Sbjct: 18 GFVNFFGEQRFGRDGTNNLDVGLRLLEGDWVGAIDRIMAPHPADSAMVAEAKEAF 72
BLAST of mRNA_H-canaliculatus_F_contig11615.1425.1 vs. uniprot
Match: D7FYR3_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR3_ECTSI) HSP 1 Score: 103 bits (256), Expect = 2.980e-24 Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 1 Query: 16 QGFVNFFGEQRFGRDGTNNLDVGMLLLGGDWAGAIDRIMAPHPADSTQVAEAKEAF 183 +GFVNFFGEQRFGRDGTNNLDVG+LLL GDW AIDRIMAPHPADS V+EAKEAF Sbjct: 396 EGFVNFFGEQRFGRDGTNNLDVGLLLLEGDWPAAIDRIMAPHPADSAMVSEAKEAF 451
BLAST of mRNA_H-canaliculatus_F_contig11615.1425.1 vs. uniprot
Match: A0A836CLL9_9STRA (TRUD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL9_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.550e-10 Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 1 Query: 7 IEPQGFVNFFGEQRFGRDGTNNLDVGMLLLGGDWAGAIDRIMAPHPADSTQVAEAKEAF 183 + QGFVNFFG QRFGR T N +VGM +L +WA A+D+++AP D VA AK A+ Sbjct: 362 LVAQGFVNFFGPQRFGRADTPNHEVGMSILRLEWAEAVDKLLAPSSRDGADVAAAKAAW 420
BLAST of mRNA_H-canaliculatus_F_contig11615.1425.1 vs. uniprot
Match: A0A5J4WAN7_9EUKA (Putative multisubstrate pseudouridine synthase 7 n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4WAN7_9EUKA) HSP 1 Score: 53.1 bits (126), Expect = 1.350e-6 Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 1 Query: 7 IEPQGFVNFFGEQRFGRDGTNNLDVGMLLLGGDWAGAIDRIMAPHPADSTQVAEAKEAF 183 + GF+N+FGEQRFG +VG ++ +W A+ IM+ H DS Q+ EAK F Sbjct: 381 VARNGFINYFGEQRFGTGEIGTHEVGKCIIKKEWERAVKLIMSEHNGDSPQLIEAKRIF 439
BLAST of mRNA_H-canaliculatus_F_contig11615.1425.1 vs. uniprot
Match: B7FX01_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX01_PHATC) HSP 1 Score: 52.4 bits (124), Expect = 2.510e-6 Identity = 25/56 (44.64%), Postives = 38/56 (67.86%), Query Frame = 1 Query: 7 IEPQGFVNFFGEQRFGRDGTNNLDVGMLLLGGDWAGAIDRIMAPHPADSTQVAEAK 174 ++ GF+N+FG QRFG+ +L G+ +L GD+ GAID IM+P P + +AEA+ Sbjct: 351 LKDNGFINYFGVQRFGKYHDTHL-TGIAILKGDYEGAIDIIMSPKPDERPNIAEAR 405
BLAST of mRNA_H-canaliculatus_F_contig11615.1425.1 vs. uniprot
Match: A0A0L0DP21_THETB (Pus7 protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DP21_THETB) HSP 1 Score: 52.0 bits (123), Expect = 3.440e-6 Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 1 Query: 4 TIEPQGFVNFFGEQRFGRDGTNNLDVGMLLLGGDWAGAIDRIMAPHPA-DSTQVAEAKEAF 183 + +GF+N+FGEQRFG +VG +LGGD AGAI I+ P + D+ Q+ AK F Sbjct: 354 SFSTRGFINYFGEQRFGTHEVRTHEVGRKILGGDLAGAIRLILKPSLSKDTPQILAAKAQF 414
BLAST of mRNA_H-canaliculatus_F_contig11615.1425.1 vs. uniprot
Match: A0A4Y7TNY0_9AGAR (Pseudouridine synthase n=1 Tax=Coprinellus micaceus TaxID=71717 RepID=A0A4Y7TNY0_9AGAR) HSP 1 Score: 52.0 bits (123), Expect = 3.450e-6 Identity = 24/61 (39.34%), Postives = 36/61 (59.02%), Query Frame = 1 Query: 1 NTIEPQGFVNFFGEQRFGRDGTNNLDVGMLLLGGDWAGAIDRIMAPHPADSTQVAEAKEAF 183 NTI+ GF+N++G QRFG +G+ LL DW AID I+ + +VA A++A+ Sbjct: 475 NTIKTNGFINYYGMQRFGTASVPTHAIGLALLRSDWQKAIDLILQKRHGEHPEVAAARDAW 535
BLAST of mRNA_H-canaliculatus_F_contig11615.1425.1 vs. uniprot
Match: A0A087H6Z2_ARAAL (TRUD domain-containing protein n=10 Tax=Brassicaceae TaxID=3700 RepID=A0A087H6Z2_ARAAL) HSP 1 Score: 51.2 bits (121), Expect = 6.430e-6 Identity = 24/60 (40.00%), Postives = 34/60 (56.67%), Query Frame = 1 Query: 4 TIEPQGFVNFFGEQRFGRDGTNNLDVGMLLLGGDWAGAIDRIMAPHPADSTQVAEAKEAF 183 ++ GF+N+FG QRFG VG LL G+W AID I+ P ++ V EA+E + Sbjct: 311 SLGKDGFINYFGLQRFGSGSVPTHHVGAALLKGEWKDAIDMILNPRESERNDVNEAREYY 370
BLAST of mRNA_H-canaliculatus_F_contig11615.1425.1 vs. uniprot
Match: A0A5E3WJB2_9AGAM (TRUD domain-containing protein n=1 Tax=Peniophora sp. CBMAI 1063 TaxID=718367 RepID=A0A5E3WJB2_9AGAM) HSP 1 Score: 50.4 bits (119), Expect = 1.210e-5 Identity = 21/61 (34.43%), Postives = 35/61 (57.38%), Query Frame = 1 Query: 1 NTIEPQGFVNFFGEQRFGRDGTNNLDVGMLLLGGDWAGAIDRIMAPHPADSTQVAEAKEAF 183 N+I+ GF+N++G QRFG +G+ L DW GA++ I+ P + V A++A+ Sbjct: 535 NSIKTNGFINYYGMQRFGTAAIPTHTIGLAFLRSDWQGAVNLILRERPGEHPDVVAARKAW 595
BLAST of mRNA_H-canaliculatus_F_contig11615.1425.1 vs. uniprot
Match: A0A0X3P2A4_SCHSO (Pseudouridylate synthase 7 homolog n=3 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A0X3P2A4_SCHSO) HSP 1 Score: 49.7 bits (117), Expect = 2.250e-5 Identity = 24/59 (40.68%), Postives = 32/59 (54.24%), Query Frame = 1 Query: 10 EPQGFVNFFGEQRFGRDG-TNNLDVGMLLLGGDWAGAIDRIMAPHPADSTQVAEAKEAF 183 + QGF+N+FG QRFG +G L+ DW AID I+ P P D V + KE + Sbjct: 287 QKQGFINYFGLQRFGHSAQAQTFAIGKYLIKSDWEKAIDLILKPTPLDLPAVRQVKEKY 345 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11615.1425.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11615.1425.1 >prot_H-canaliculatus_F_contig11615.1425.1 ID=prot_H-canaliculatus_F_contig11615.1425.1|Name=mRNA_H-canaliculatus_F_contig11615.1425.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=61bp NTIEPQGFVNFFGEQRFGRDGTNNLDVGMLLLGGDWAGAIDRIMAPHPADback to top mRNA from alignment at H-canaliculatus_F_contig11615:181..363+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11615.1425.1 ID=mRNA_H-canaliculatus_F_contig11615.1425.1|Name=mRNA_H-canaliculatus_F_contig11615.1425.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=183bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11615:181..363+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11615:181..363+ >mRNA_H-canaliculatus_F_contig11615.1425.1 ID=mRNA_H-canaliculatus_F_contig11615.1425.1|Name=mRNA_H-canaliculatus_F_contig11615.1425.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=366bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11615:181..363+ (Hapterophycus canaliculatus Oshoro5f female)back to top |