mRNA_H-canaliculatus_F_contig11608.1414.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11608.1414.1
Unique NamemRNA_H-canaliculatus_F_contig11608.1414.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11608.1414.1 vs. uniprot
Match: D8LKQ5_ECTSI (Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ5_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 1.090e-81
Identity = 166/195 (85.13%), Postives = 170/195 (87.18%), Query Frame = 1 
Query:    1 GHMRFVGELYKVELLKEKHVHTAIQDMCQNGEEPDEERLECMVKLLQTCGKKLDQTGSPETAKDMKRLFKRVGKLADGRQVSSRIRFMLRDLIELRKNRWVPRREEEKAKTMQELHNIIAKEEXXXXXXXXXXXXXXXXXXXXXGSSSIRPGSGDARVSSGSRGEAMSTSTGSRPTGLGASTAKKDDDGWETVPK 585
            GHMRFVGELYKVELLKEKHVH AI DM  N +EPDEERLECMVKLLQTCGKKLD TGSP+  KDMKRLFKRVGK+ADGRQVSSRIRFMLRDLIELRKN WVPRREEEKAKTMQELHN IAKE    XXXXXXXXXXXXX     GSSSIRPGSGDARVS GSRGE  STSTGSRPTGL  +T KKDDDGWETVPK
Sbjct:  438 GHMRFVGELYKVELLKEKHVHAAIHDMFGNADEPDEERLECMVKLLQTCGKKLDHTGSPDIVKDMKRLFKRVGKVADGRQVSSRIRFMLRDLIELRKNHWVPRREEEKAKTMQELHNDIAKE----XXXXXXXXXXXXXPGGSSGSSSIRPGSGDARVSMGSRGE--STSTGSRPTGLAVAT-KKDDDGWETVPK 625
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BLAST of mRNA_H-canaliculatus_F_contig11608.1414.1 vs. uniprot
Match: A0A6H5L9P4_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9P4_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 1.330e-70
Identity = 152/194 (78.35%), Postives = 155/194 (79.90%), Query Frame = 1 
Query:    1 GHMRFVGELYKVELLKEKHVHTAIQDMCQNGEEPDEERLECMVKLLQTCGKKLDQTGSPETAKDMKRLFKRVGKLADGRQVSSRIRFMLRDLIELRKNRWVPRREEEKAKTMQELHNIIAKEEXXXXXXXXXXXXXXXXXXXXXGSSSIRPGSGDARVSSGSRGEAMSTSTGSRPTGLGASTAKKDDDGWETVP 582
            GHMRFVGELYKVELLKEKHVH AI DM  N +EPDEERLECMVKLLQTCGKKLDQTGSP+  KDMKRLFKRVGK+ADGRQVSSRIRFMLRDLIELRKN WVPRREEEKAKTMQELHN IAKE    XXXXXXXXXXXX      GSSSIRPGSGDA                 RPTGL A  AKKDDDGWETVP
Sbjct:  408 GHMRFVGELYKVELLKEKHVHAAIHDMFGNADEPDEERLECMVKLLQTCGKKLDQTGSPDIVKDMKRLFKRVGKVADGRQVSSRIRFMLRDLIELRKNYWVPRREEEKAKTMQELHNDIAKE----XXXXXXXXXXXXRPGGSSGSSSIRPGSGDAXXXXXXXXXXXXXXX--RPTGL-AVAAKKDDDGWETVP 594
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BLAST of mRNA_H-canaliculatus_F_contig11608.1414.1 vs. uniprot
Match: A0A836CBQ1_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ1_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.730e-33
Identity = 97/242 (40.08%), Postives = 129/242 (53.31%), Query Frame = 1 
Query:    1 GHMRFVGELYKVELLKEKHVHTAIQDMCQNGEE----PDEERLECMVKLLQTCGKKLDQ-TGSPETAKDMKRLFKRVGKLAD-----GRQV---------------SSRIRFMLRDLIELRKNRWVPRREEEKAKTMQELHNIIAKEEXXXXXXXXXXXXXXXXXXXXXGSSSIRPGSGDARV-SSGSRGEAMSTSTGSRPTGLGASTAKKD------------------DDGWETVPKKGK 594
            GHMRFVGELYKV LLKEK+VH +I+++    E+    PDEE+LECMVKL+ T G +++Q   SP+  K+ KR FKR+ KL++      RQV               + R+RFMLRDL++LR N WVPRR EEKAKT+ ++HN +A+EE                            GS +A+   +G  G    +S  SRP+  G  +  +D                  DDGWETVP KGK
Sbjct:  188 GHMRFVGELYKVGLLKEKYVHLSIEELLGMEEDGNVMPDEEKLECMVKLMSTVGAQMEQHPSSPDFVKNFKRYFKRIKKLSEDTEHVSRQVLWAPPQSSTVLQAHAALRLRFMLRDLVDLRSNDWVPRRAEEKAKTLAQIHNEVAREEGVAGDACRGCWGQWGM------------GSAEAKARKAGGDGRRHGSSVPSRPSSSGVGSGSQDVRSGGRSGYTPSAPAPVADDGWETVPAKGK 417
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BLAST of mRNA_H-canaliculatus_F_contig11608.1414.1 vs. uniprot
Match: A0A7S2BR93_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BR93_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.500e-25
Identity = 61/125 (48.80%), Postives = 85/125 (68.00%), Query Frame = 1 
Query:    1 GHMRFVGELYKVELLKEKHVHTAIQDMCQNGEEPDEERLECMVKLLQTCGKKLDQT--GSPETAKDMKRLFKRVGKLADGRQVSSRIRFMLRDLIELRKNRWVPRREEEKAKTMQELHNIIAKEE 369
            GHM+FVG+LY+VELL  K +H  IQ++   G+  DEE+L+C+  LL T GK+L+       + AK MK+  K +  L     +SSRIRFM+RDL+E+R N W  RREEE AKT+ E+H+ +A+EE
Sbjct:  489 GHMKFVGQLYRVELLSVKIMHYCIQELFGEGDNLDEEKLQCLCTLLTTIGKQLEDACANQAKQAKMMKKYIKELKSLGGNMTLSSRIRFMIRDLLEMRLNNWTARREEESAKTIAEIHDDVAREE 613
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BLAST of mRNA_H-canaliculatus_F_contig11608.1414.1 vs. uniprot
Match: A0A4D9D503_9STRA (MI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D503_9STRA)

HSP 1 Score: 112 bits (279), Expect = 6.930e-25
Identity = 85/206 (41.26%), Postives = 112/206 (54.37%), Query Frame = 1 
Query:    1 GHMRFVGELYKVELLKEKHVHTAIQDMCQNGEEPDEERLECMVKLLQTCGKKLDQTG--SPETAKDMKRL----FKRVGKLADGRQV-SSRIRFMLRDLIELRKNRWVPRREEEKAKTMQELHNIIAKEEXXXXXXXXXXXXXXXXXXXXXGSSSIRPGSG--DARVSSGSRGEAMSTSTGSRPTGLGASTAKKDDDGWETV-PKK 588
            GHMRF+GEL+  ELLKE+HVH  I+D+    + PDEE+L C+ KLL T GKKL+     + ET+K  +RL    F+ V KL+    V SSRIR +L+DL ELR+N +VPRR  E AKT+ ++H   A+E                      G      GSG  D R   G    +  +S+ S       S +  D+DGWETV PKK
Sbjct:  434 GHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDLFELRQNNYVPRRAVETAKTLSQVHEEAAREALAKGQSSGPKSVGGGKMTGNSGGGGRPMGSGAQDTRKEKGFSETSRQSSSASL-----TSPSIVDEDGWETVGPKK 634
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BLAST of mRNA_H-canaliculatus_F_contig11608.1414.1 vs. uniprot
Match: F0Y1G5_AURAN (MIF4G domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1G5_AURAN)

HSP 1 Score: 105 bits (262), Expect = 3.060e-24
Identity = 57/118 (48.31%), Postives = 81/118 (68.64%), Query Frame = 1 
Query:    1 GHMRFVGELYKVELLKEKHVHTAIQDMCQNGEEPDEERLECMVKLLQTCGKKLDQTG--SPETAKDMKRLFKRVGKLADGRQVSSRIRFMLRDLIELRKNRWVPRREEEKAKTMQELH 348
            GHM F+G LYK E+LKE  +H  +Q++  + +EPD E++EC+ KL+ T GK+LD       E+ K MK  FK++ KLA  +++ SRIRFM++DL ELR + W PRR  E AKT+ E+H
Sbjct:  131 GHMFFIGALYKHEMLKESIMHHCVQELFGDPDEPDGEKIECLAKLMATIGKQLDAAALEKKESMKFMKAYFKQLKKLAVNQKLESRIRFMVKDLCELRDDLWKPRRAVETAKTIAEIH 248
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BLAST of mRNA_H-canaliculatus_F_contig11608.1414.1 vs. uniprot
Match: A0A7S3NGS0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGS0_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.710e-23
Identity = 57/131 (43.51%), Postives = 91/131 (69.47%), Query Frame = 1 
Query:    1 GHMRFVGELYKVELLKEKHVHTAIQDMCQNGEEPDEERLECMVKLLQTCGKKLD----QTGSPETAKDMKRLFKRVGKLA----DGRQVSSRIRFMLRDLIELRKNRWVPRREEEKAKTMQELHNIIAKEE 369
            GHM F+G LYK+ELL+E  +++ I+++  + +EPD E++EC+ KL  + GKKLD    ++G  E+ + MK  FK++ +LA    +  ++ +RIR++LRDL ELR+N W+PRR+ E AKT+ E+H    +EE
Sbjct:  399 GHMFFIGALYKLELLREGVMYSCIEELFGDPDEPDAEKIECLAKLFTSIGKKLDLAALESGKKESQRRMKAYFKQIKRLATNANNDNKLDTRIRYLLRDLYELRENDWIPRRKVESAKTIAEIHREAQREE 529
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BLAST of mRNA_H-canaliculatus_F_contig11608.1414.1 vs. uniprot
Match: A0A7S2FBL7_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FBL7_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.010e-21
Identity = 59/132 (44.70%), Postives = 83/132 (62.88%), Query Frame = 1 
Query:    1 GHMRFVGELYKVELLKEKHVHTAIQDMCQNGEEPDEERLECMVKLLQTCGKKLDQTGSPETA---------KDMKRLFKRVGKLADGRQVSSRIRFMLRDLIELRKNRWVPRREEEKAKTMQELHNIIAKEE 369
            GHM+FVGELY+V LL +K +H  IQD+  N EEPDEE+L C+  LL + G +L+++ +  T           ++K L     KL      +SRIRFM++DL+E+R N W  RRE EKAKT+ E+H   A++E
Sbjct:  177 GHMKFVGELYRVHLLSDKIIHFCIQDLFGNPEEPDEEKLACLCTLLTSIGPQLEESATQSTKYAXXXXXXXXELKALSNMPDKL------NSRIRFMIKDLLEMRANGWTARRETEKAKTIAEIHEDAARDE 302
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BLAST of mRNA_H-canaliculatus_F_contig11608.1414.1 vs. uniprot
Match: A0A7S1GLC7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GLC7_CYCTE)

HSP 1 Score: 100 bits (248), Expect = 5.230e-21
Identity = 57/133 (42.86%), Postives = 87/133 (65.41%), Query Frame = 1 
Query:    1 GHMRFVGELYKVELLKEKHVHTAIQDMCQNGEEPDEERLECMVKLLQTCGKKLDQ-------TGSPETAKDMKRLFKRVGKLADG---RQVSSRIRFMLRDLIELRKNRWVPRREEEKAKTMQELHNIIAKEE 369
            GHMRF+GELYKV+++K   +   ++ + Q+ EE   E++EC  +L+ T G  L+Q        G P  ++D+K L+K    L +G   + VS+RI+FML DL EL++N WV RREEE AKT++++H  +A+EE
Sbjct:   56 GHMRFIGELYKVDMIKNDIMLWCLKTLLQDFEE---EKVECFAQLMTTIGYSLEQHSAALLQAGKPNASEDLKELWKSANSLVEGSSGQPVSNRIKFMLLDLKELKQNGWVKRREEESAKTIEQIHKDVAREE 185
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BLAST of mRNA_H-canaliculatus_F_contig11608.1414.1 vs. uniprot
Match: A0A6P7THG7_OCTVU (eukaryotic translation initiation factor 4 gamma 1 isoform X1 n=5 Tax=Octopus TaxID=6643 RepID=A0A6P7THG7_OCTVU)

HSP 1 Score: 99.8 bits (247), Expect = 1.320e-20
Identity = 56/123 (45.53%), Postives = 80/123 (65.04%), Query Frame = 1 
Query:    1 GHMRFVGELYKVELLKEKHVHTAIQDMCQNGEEPDEERLECMVKLLQTCGKKLDQTGSPETAKDMKRLFKRVGKLADGRQVSSRIRFMLRDLIELRKNRWVPRREEEKAKTMQELHNIIAKEE 369
            G++RF+GEL+K+ ++K   +H  ++ +  +    DEE+LECM KLL T GK ++     E   +M R FK +  +   R+ SSRIRFML DLI+LRKN+WVPR  E+  KT++ELH  I  EE
Sbjct:  294 GNIRFIGELFKMNMVKLDIMHGCLERLSSST---DEEKLECMCKLLSTVGKVIESKAKNE---EMNRYFKDIRAIVGARETSSRIRFMLLDLIDLRKNKWVPRHAEKGPKTLKELHQDIENEE 410
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11608.1414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKQ5_ECTSI1.090e-8185.13Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus... [more]
A0A6H5L9P4_9PHAE1.330e-7078.35MI domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A836CBQ1_9STRA1.730e-3340.08Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A7S2BR93_9STRA1.500e-2548.80Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9D503_9STRA6.930e-2541.26MI domain-containing protein n=2 Tax=Monodopsidace... [more]
F0Y1G5_AURAN3.060e-2448.31MIF4G domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S3NGS0_9STRA2.710e-2343.51Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2FBL7_9STRA1.010e-2144.70Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S1GLC7_CYCTE5.230e-2142.86Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A6P7THG7_OCTVU1.320e-2045.53eukaryotic translation initiation factor 4 gamma 1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11608contigH-canaliculatus_F_contig11608:323..4114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score266.9
Seed ortholog evalue7.9e-69
Seed eggNOG ortholog2880.D8LKQ5
KEGG koko:K03260
KEGG Pathwayko03013,ko05416,map03013,map05416
KEGG ModuleM00428
GOsGO:0000932,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010494,GO:0016043,GO:0016281,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0031369,GO:0032991,GO:0034063,GO:0034622,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.translation initiation factor activity
EggNOG OGsKOG0401@1,KOG0401@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03012,ko03019
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptioneukaryotic initiation factor 4G
Ec32 orthologEc-07_004420.1
Exons6
Model size639
Cds size633
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928852.2980514-UTR-H-canaliculatus_F_contig11608:322..3281622928852.2980514-UTR-H-canaliculatus_F_contig11608:322..328Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11608 323..328 +
1696845588.900971-UTR-H-canaliculatus_F_contig11608:322..3281696845588.900971-UTR-H-canaliculatus_F_contig11608:322..328Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11608 323..328 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928852.3108215-CDS-H-canaliculatus_F_contig11608:328..3881622928852.3108215-CDS-H-canaliculatus_F_contig11608:328..388Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11608 329..388 +
1696845588.9181662-CDS-H-canaliculatus_F_contig11608:328..3881696845588.9181662-CDS-H-canaliculatus_F_contig11608:328..388Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11608 329..388 +
1622928852.323214-CDS-H-canaliculatus_F_contig11608:1290..14131622928852.323214-CDS-H-canaliculatus_F_contig11608:1290..1413Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11608 1291..1413 +
1696845588.928501-CDS-H-canaliculatus_F_contig11608:1290..14131696845588.928501-CDS-H-canaliculatus_F_contig11608:1290..1413Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11608 1291..1413 +
1622928852.3358126-CDS-H-canaliculatus_F_contig11608:2029..21091622928852.3358126-CDS-H-canaliculatus_F_contig11608:2029..2109Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11608 2030..2109 +
1696845588.9365628-CDS-H-canaliculatus_F_contig11608:2029..21091696845588.9365628-CDS-H-canaliculatus_F_contig11608:2029..2109Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11608 2030..2109 +
1622928852.3496048-CDS-H-canaliculatus_F_contig11608:2505..25781622928852.3496048-CDS-H-canaliculatus_F_contig11608:2505..2578Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11608 2506..2578 +
1696845588.9459357-CDS-H-canaliculatus_F_contig11608:2505..25781696845588.9459357-CDS-H-canaliculatus_F_contig11608:2505..2578Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11608 2506..2578 +
1622928852.3595276-CDS-H-canaliculatus_F_contig11608:2866..30121622928852.3595276-CDS-H-canaliculatus_F_contig11608:2866..3012Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11608 2867..3012 +
1696845588.9580393-CDS-H-canaliculatus_F_contig11608:2866..30121696845588.9580393-CDS-H-canaliculatus_F_contig11608:2866..3012Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11608 2867..3012 +
1622928852.3711953-CDS-H-canaliculatus_F_contig11608:3963..41141622928852.3711953-CDS-H-canaliculatus_F_contig11608:3963..4114Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11608 3964..4114 +
1696845588.9691522-CDS-H-canaliculatus_F_contig11608:3963..41141696845588.9691522-CDS-H-canaliculatus_F_contig11608:3963..4114Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11608 3964..4114 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11608.1414.1prot_H-canaliculatus_F_contig11608.1414.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11608 329..4114 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11608.1414.1

>prot_H-canaliculatus_F_contig11608.1414.1 ID=prot_H-canaliculatus_F_contig11608.1414.1|Name=mRNA_H-canaliculatus_F_contig11608.1414.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=211bp
MRFVGELYKVELLKEKHVHTAIQDMCQNGEEPDEERLECMVKLLQTCGKK
LDQTGSPETAKDMKRLFKRVGKLADGRQVSSRIRFMLRDLIELRKNRWVP
RREEEKAKTMQELHNIIAKEEESKNRASGRGGGGPSRQGGSSGSSSIRPG
SGDARVSSGSRGEAMSTSTGSRPTGLGASTAKKDDDGWETVPKKGKGGGA
GGGGGDGWSQV
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mRNA from alignment at H-canaliculatus_F_contig11608:323..4114+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11608.1414.1 ID=mRNA_H-canaliculatus_F_contig11608.1414.1|Name=mRNA_H-canaliculatus_F_contig11608.1414.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3792bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11608:323..4114+ (Hapterophycus canaliculatus Oshoro5f female)
GGTCACATGCGGTTCGTGGGAGAGCTCTACAAGGTGGAGCTGCTCAAAGA
GAAACACGTGCACACGGTGAGTTTGTTTCGGCGTAGCGATCCCTCCACGT
GTCAGCCTTTGACCGCAAGCTTTCCGCGTCGCATCTTTCTGTACGTCACC
GTTCGGCAGCGCCGAGCCACCGACTTCCAATGTAGAAAGCGGGCCTTGAC
TGGATTTCCTGTGCCCCCGGCGAAAGCCCAGATTGCGGATTTCGGGAACC
CAAAAAAGTTGTATCGTATCTTCAGGCGGGAGGCCCCGCCGAGGCTCGTT
TGTTTTCAACACGCTTCTCAAAGCTTTCGGATTTGAACGACTTGTTTTGC
CGGTGCACGATGTGTCTTGTTTTGCATCGCGCCCGATCACGCAGAGCGGT
GTCCATGTGCGTCCATGTGCGTCCATGTGCTTCCATGTGCTTCGGATTTG
ATGCACGCGTGTTTTCTTCCATTGGTGCCGCCCTCCCGTACCAACCGACC
GACGAAAATACGTGATCGACGTTATCGATGACGCGCTGATACGAAGATGA
GCTTGTTCCTTGTTGATCGCGGGGTTTCCGGAAATTGTGGGATTCCGGCG
AGACTGGGTTGTGTGCGTGTCGCGTCGCGTCGCGCGCGTGGCGATTGGTT
ACGTTGCATGGTGCTCACGAGCATGTGTTAGCGGCGGGTTTTGTTTGACT
CAGCGACGACGGCGACTGCTCATCGCGTCGCCCGCTCCTCGACCGTGCGA
AAGACTTGGGGGCTGTCAAGAGCGATAGACACATCGTCAATCCTGTACAG
TAACGACAACGTTTTGCAACTGCTGCTTTTTTGTGTCTTTTCCCTGCCTC
TCTCTCTCTCTGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTGTATCTCTCTCTCTCTCTCTCTCTCTCTCTGTATCTCTCTCTCGTGC
GCGCGTTTTGTGGTGCAGGCTATCCAAGACATGTGTCAAAACGGGGAAGA
GCCAGATGAGGAGCGCTTGGAGTGCATGGTGAAGCTGCTGCAGACCTGCG
GGAAAAAGCTAGACCAGACCGGCTCTCCCGAAACTGCCAAGGTAAGACTG
GCAGAGAAGATAAGAAGGCAAGGCTGTAGGCCAGGGGCGGGCGGGCAGGC
GTGCAGGCACCAGCGTTGCTGCAGCCAATCGCGTCGCTGCGTAGACGGGC
GACATACCTCATGCTGTACCTCAGCTACAGACCCCAGGGTTGCTGCAGCC
AATCATGCCCCTGCGTAGATGGGCCACGTACCTCATCCTGTTCCTCAGCG
TTGACCCAACGTCGTCGGCCGGCGGGGCTTGCCACTGACTCGTCACGTTG
AATTCTCTTCGCGTCCTTGTCGCACGAGAGGTTGCTTGAGATTGTTGGCG
ATATTTACGGCGGTGTGTTAAAAGTCTGCGGCATGTACCGCGCACACGCA
AGGATTTTCGATTGTTGGCGAAATTTACGGCGGTGTGTTCTAATACCGCG
CACACGCGAAGATTTTTGTCGCCCAAGATGCTTGACTTTTCACACACGAT
TCCCTCCCACCGTTTGTTTTGTTCCTTCCTCTCTGTCTCTCTCTCTCTCT
CTCTCTCTCTCTATATCTATATCTATATATATATATATATCTCCCCTCGC
CTCTGTTGTTCTCTCGCTCTGTGCGTCTCTCGCGAACCTCGATAAATGCG
CCTGCAGGACATGAAGCGCTTGTTCAAGCGCGTGGGGAAACTGGCGGACG
GTCGGCAGGTCTCCAGCCGTATCCGATTCATGCTCAGGTCAGTTGCTGCA
ACGGCGGTGCACTTGGTAAAAACTGGTATCATAGAGTCGAACCCTTTCGA
ATTTCGAATCTGTTCTGACTCTCTGGCGCTTCACAGGGTTGACCGTGTCG
CGACGATCCGTCGTGCACACGCACCATGTTTTTTCGTTTGGATTAATCGA
TGCCTGTGTTTCCCGACCACTACACAACGCTACTTGTGGTGAATAAACCC
CAACCAAAAGCCTCGGTAGATGAGGTTCGGCCTAGACCCCCCAATGGCGC
CTCGGTTCTTGTGTCAGTGACGTAGAGTGAAGGGCGTGTTTAACGAGCAG
CTTTCTTCACGTTGTAAAATTCGAGAGGCTAGCCCCCCCCCCCCCAATAC
CCCTGTTTTGCGTGGTCTCTTTTTTTCCCTCAGGGACCTGATCGAGCTGA
GGAAGAACCGCTGGGTGCCCAGACGGGAGGAGGAGAAGGCCAAGACAATG
CAGGAGGTGGGTCCGTACGGGCGCTTATTTTGCCTTTCCTCATCTGTCTC
GTTTGAAATTCTTGCTTGGAAGTGGCGCTGGCCATTCCGCGCTAAACGTC
GCTGCCAGGCCACCACGATAGTCTCCCTCTCGCGTGCTCAGCTTCTGTCG
AGGGAGTGTTCGCAGACAAACTTGAGGTGGTAGGCTCGGTGCCGAGCTGC
CAAGGACGCTGATCAACGTGTGCGGCTCCTCCGACCCATCGACTGGAACA
GCGCCTCTGGTGACGCGCAACGCTCTTGTCCTCGCCCCCGGCAGTTGCAC
AACATCATCGCTAAGGAGGAGGAGTCCAAGAACCGCGCCAGCGGGAGGGG
AGGCGGGGGTCCATCCAGACAAGGGGGCAGCTCCGGTAGCTCCTCCATCC
GGCCGGGATCCGGGGATGCTCGCGTGTCGAGCGGCTCCAGGTGGGTACAT
TCACATCCCCGGTCTGAGGGCCACTCTGTGCGGTGTTGCCGCTGCCGTTG
CCGCTACGGTGTCGGAGGGGGGAGTGAGGGCGCTGTTGCTGCTGTCTGCT
GCCGCTTTCGATTACCAGCGGCTCTCGCTTGCTTTTCGTCGTGTCAGGTT
TGATAAAACTAGATCGGAGTCGAATGTCAGGAACGGGGCTCCTTGCCGCC
GCCGCCGCCGCCGCCGCCACTGCCGGAGCAGCAAGGCCCCACCCCGCCGT
TTCGAGACGAGCAGCTTGTTTGCGAACTGCGCGAAACAACTTCATCGACA
ACGCCACGGTGTTGTTGTCGCCGCGGTGGCTCTCCCGATGATTCGCTGAA
TGTTCGAGTTTGTGGAAGATCAGATTGTGTTTCACCCCCACACGAGCCCT
CGTCAAAGCGTTCAGAGTGTGCTTCCCAGTAGTATCCCCCCCCCCTCTCC
TCATATCTGACCCGTCTTCTGAGGAGTTTCAATCGAATGTAGTGTGTGTG
TGTGCGCGCGCGTTTGAGTCACGCCGTGTTCTCCGTAGCTTGGTTTTTCA
TGTTGCTTTTTTCACTGCTTTTTGTGCTGTACTGGTTTTTCATCGTGGTT
TTCTCCTGGTGTTTCGCCTGGTTTTTTATGCTTGGTTTTTCATCCTGCCG
TCGGTTCTCAGACACTGCTGCTGATGCACGGGCGTGTAAGATAAAGGTTC
ACGGCTTACACCAGGCGCCGGCCTTCAGCTTCCGCAGCAGGACGGACGAG
GCGTTTCCCACACGACCCTTCACGCGCGTGCTACACACGCAACCTCAAAA
ATAATTTCTGTCGACCACAGCTTCACAGCGAATTAATCCTCGGCAAGTAG
TTAATGCAGCATTTTCAAGACTCGCGTAGACACTCGGCAGGGCAACCTTT
CCCACGACGCGCCACGATACCCGGATCGCATTTTCGTTCAGGGGCGAGGC
CATGTCGACGTCGACGGGGTCGCGCCCCACGGGACTGGGGGCATCCACCG
CCAAGAAGGACGACGACGGCTGGGAGACCGTGCCGAAGAAGGGCAAAGGC
GGGGGTGCTGGAGGAGGGGGGGGCGACGGCTGGAGCCAGGTA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11608:323..4114+

>mRNA_H-canaliculatus_F_contig11608.1414.1 ID=mRNA_H-canaliculatus_F_contig11608.1414.1|Name=mRNA_H-canaliculatus_F_contig11608.1414.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1266bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11608:323..4114+ (Hapterophycus canaliculatus Oshoro5f female)
ATGCGGTTCGTGGGAGAGCTCTACAAGGTGGAGCTGCTCAAAGAGAAACA
CGTGCACACGATGCGGTTCGTGGGAGAGCTCTACAAGGTGGAGCTGCTCA
AAGAGAAACACGTGCACACGGCTATCCAAGACATGTGTCAAAACGGGGAA
GAGCCAGATGAGGAGCGCTTGGAGTGCATGGTGAAGCTGCTGCAGACCTG
CGGGAAAAAGCTAGACCAGACCGGCTCTCCCGAAACTGCCAAGGCTATCC
AAGACATGTGTCAAAACGGGGAAGAGCCAGATGAGGAGCGCTTGGAGTGC
ATGGTGAAGCTGCTGCAGACCTGCGGGAAAAAGCTAGACCAGACCGGCTC
TCCCGAAACTGCCAAGGACATGAAGCGCTTGTTCAAGCGCGTGGGGAAAC
TGGCGGACGGTCGGCAGGTCTCCAGCCGTATCCGATTCATGCTCAGGACA
TGAAGCGCTTGTTCAAGCGCGTGGGGAAACTGGCGGACGGTCGGCAGGTC
TCCAGCCGTATCCGATTCATGCTCAGGGACCTGATCGAGCTGAGGAAGAA
CCGCTGGGTGCCCAGACGGGAGGAGGAGAAGGCCAAGACAATGCAGGAGG
GACCTGATCGAGCTGAGGAAGAACCGCTGGGTGCCCAGACGGGAGGAGGA
GAAGGCCAAGACAATGCAGGAGTTGCACAACATCATCGCTAAGGAGGAGG
AGTCCAAGAACCGCGCCAGCGGGAGGGGAGGCGGGGGTCCATCCAGACAA
GGGGGCAGCTCCGGTAGCTCCTCCATCCGGCCGGGATCCGGGGATGCTCG
CGTGTCGAGCGGCTCCAGTTGCACAACATCATCGCTAAGGAGGAGGAGTC
CAAGAACCGCGCCAGCGGGAGGGGAGGCGGGGGTCCATCCAGACAAGGGG
GCAGCTCCGGTAGCTCCTCCATCCGGCCGGGATCCGGGGATGCTCGCGTG
TCGAGCGGCTCCAGGGGCGAGGCCATGTCGACGTCGACGGGGTCGCGCCC
CACGGGACTGGGGGCATCCACCGCCAAGAAGGACGACGACGGCTGGGAGA
CCGTGCCGAAGAAGGGCAAAGGCGGGGGTGCTGGAGGAGGGGGGGGCGAC
GGCTGGAGCCAGGTAGGGCGAGGCCATGTCGACGTCGACGGGGTCGCGCC
CCACGGGACTGGGGGCATCCACCGCCAAGAAGGACGACGACGGCTGGGAG
ACCGTGCCGAAGAAGGGCAAAGGCGGGGGTGCTGGAGGAGGGGGGGGCGA
CGGCTGGAGCCAGGTA
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