mRNA_H-canaliculatus_F_contig11587.1400.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11587.1400.1 vs. uniprot
Match: D8LJQ1_ECTSI (Polyprenol reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJQ1_ECTSI) HSP 1 Score: 218 bits (555), Expect = 5.620e-68 Identity = 110/169 (65.09%), Postives = 127/169 (75.15%), Query Frame = 1 Query: 1 LMVLTVLVEAPPLAYSSNYNSYNNAPGFGPALVAVAGSVSFRHAVAVGLFVVGFVRQHEAIRHLASLRGPPGRAGDGSSKTNVANTYAIPTEGWFQHVSSAHYLSELLVYSAFVLLGSFKGRGLGQGYLVAFAWVFANHSLVAGRTHAWYQQKFEDYPRERKRLIPGVW 507 LMV TVLVEAPPL + ++ G ++A+A SV RHAVA+GLF++GFVRQHEAIRHLASL+G G A YAIPT GWF++VS HY +ELLVY +FVLLGSFKGRGLGQGYLVAFAWVFAN +LVAG AWYQQKFEDYPR+R+RLIPGVW Sbjct: 159 LMVFTVLVEAPPLGLLAEEAWSRSSGGASDIVLALATSVKLRHAVAMGLFIIGFVRQHEAIRHLASLKGNVG---------TKATKYAIPTAGWFRYVSCPHYFAELLVYGSFVLLGSFKGRGLGQGYLVAFAWVFANQALVAGWVQAWYQQKFEDYPRDRRRLIPGVW 318
BLAST of mRNA_H-canaliculatus_F_contig11587.1400.1 vs. uniprot
Match: A0A7S2W9S8_9STRA (Polyprenol reductase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W9S8_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.510e-23 Identity = 53/118 (44.92%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 145 LFVVGFVRQHEAIRHLASLRGPPGRAGDGSSKTNVANTYAIPTEGWFQHVSSAHYLSELLVYSAFVLLGSFKGRGLGQGYLVAFAWVFANHSLVAGRTHAWYQQKFEDYPRERKRLIP 498 LFVVG +QH++ + L+ LR RA Y+IP GWF++VSS HYLSE+L+Y++ +L+ + + L L+ F +V N S+ A RTHAWY+QKF+DYP+ER R+IP Sbjct: 20 LFVVGSYQQHKSHKILSDLRQGKTRA------------YSIPRMGWFEYVSSPHYLSEILIYAS-ILVQNTQSISL----LLMFTFVVFNLSITAARTHAWYKQKFDDYPKERTRMIP 120
BLAST of mRNA_H-canaliculatus_F_contig11587.1400.1 vs. uniprot
Match: A0A251RPV5_HELAN (Polyprenol reductase n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251RPV5_HELAN) HSP 1 Score: 92.4 bits (228), Expect = 7.710e-21 Identity = 59/126 (46.83%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 133 VAVGLFVVGFVRQHEAIRHLASLRGPPGRAGDGS--SKTNVANTYAIPTEGWFQHVSSAHYLSELLVYSAFVLLGSFKGRGLGQGYLVAFAWVFANHSLVAGRTHAWYQQKFEDYPRERKRLIPGV 504 VAV L + GF H AI LA RG ++ GS +K N YAIP WF++VSSAHY +E+++Y LL + GR L L FA+V AN VA THAWY QKF+DYPR+R+ + P V Sbjct: 22 VAVWLQLPGFRWLHGAILGLAK-RGKALKSNTGSLRNKPENLNEYAIPHGDWFEYVSSAHYTAEIVIYGG--LLVASGGRDLSLWLL--FAFVVANLGFVATLTHAWYLQKFDDYPRKRRAIFPFV 142
BLAST of mRNA_H-canaliculatus_F_contig11587.1400.1 vs. uniprot
Match: A0A251RNJ8_HELAN (Polyprenol reductase n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251RNJ8_HELAN) HSP 1 Score: 85.1 bits (209), Expect = 8.570e-17 Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 235 SKTNVANTYAIPTEGWFQHVSSAHYLSELLVYSAFVLLGSFKGRGLGQGYLVAFAWVFANHSLVAGRTHAWYQQKFEDYPRERKRLIPGVW 507 +K N YAIP WF++VSSAHY +E+++Y LL + GR L L FA+V AN VA THAWY QKF+DYPR+R+ + P V+ Sbjct: 197 NKPENLNEYAIPHGDWFEYVSSAHYTAEIVIYGG--LLVASGGRDLSLWLL--FAFVVANLGFVATLTHAWYLQKFDDYPRKRRAIFPFVY 283
BLAST of mRNA_H-canaliculatus_F_contig11587.1400.1 vs. uniprot
Match: A0A7N0VFA9_KALFE (Polyprenol reductase n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0VFA9_KALFE) HSP 1 Score: 83.2 bits (204), Expect = 1.070e-16 Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = 1 Query: 145 LFVVGFVRQHEAIRHLASLRGPPGRAGDGSSKTNVANTYAIPTEGWFQHVSSAHYLSELLVYSAFVLLGSFKGRGLGQGYLVAFAWVFANHSLVAGRTHAWYQQKFEDYPRERKRLIPGVW 507 +F+ G++ Q L SLR + + + PT WF +VSS HYL+E+++Y+ V+ G +AFA+ AN AG TH WY KFEDYPR+RK +IP V+ Sbjct: 93 IFLWGWIHQRNCHAILGSLR----------QRKRDRDKHVTPTGDWFNYVSSPHYLAEMVIYAGLVIASG----GTDLTIWLAFAFTVANLCFAAGETHRWYLDKFEDYPRDRKAVIPLVY 199
BLAST of mRNA_H-canaliculatus_F_contig11587.1400.1 vs. uniprot
Match: A0A4P9YXT3_9FUNG (Polyprenol reductase n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YXT3_9FUNG) HSP 1 Score: 82.4 bits (202), Expect = 1.640e-16 Identity = 47/126 (37.30%), Postives = 62/126 (49.21%), Query Frame = 1 Query: 133 VAVGLFVVGFVRQHEAIRHLASLRGP-PGRAGDGSSKTNVANTYAIPTEGWFQHVSSAHYLSELLVYSAFVLLGSFKGRGLGQGYLVAFAWVFANHSLVAGRTHAWYQQKFEDYPRERKRLIPGVW 507 +A+ LF + Q+ L LR PG TYAIP GWF HVSS HYL+ELL+Y+A +L F + AWV N A +TH WY+++F DYP R IP ++ Sbjct: 80 LALSLFAYASIEQYRCHAILGQLRATQPG-------------TYAIPYGGWFSHVSSPHYLAELLIYTALAMLLRFPWT-----WCCLLAWVVVNLGTTARQTHRWYRRQFRDYPAARTAFIPKLY 187
BLAST of mRNA_H-canaliculatus_F_contig11587.1400.1 vs. uniprot
Match: A0A2R5G1E1_9STRA (Polyprenol reductase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1E1_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.410e-15 Identity = 47/122 (38.52%), Postives = 62/122 (50.82%), Query Frame = 1 Query: 139 VGLFVVGFVRQHEAIRHLASLRGPPGRAGDGSSKTNVANTYAIPTEGWFQHVSSAHYLSELLVYSAFVLLGSFKGRGLGQGYLVAFAWVFANHSLVAGRTHAWYQQKFEDYPRERKRLIPGV 504 V LF +G QH+ R LA LR A G S Y +P F VS HY E+L+Y F L+ S + +AF +V N L A R+HAWY+ KF+DYP ERK ++P + Sbjct: 215 VALFALGMYEQHQTHRILAGLRPTESTAASGCS------VYRVPQGRLFALVSCPHYFLEMLIYLGFALMDS-----VNLSLWLAFVFVCLNLGLTALRSHAWYKAKFDDYPAERKAVVPFI 325
BLAST of mRNA_H-canaliculatus_F_contig11587.1400.1 vs. uniprot
Match: D8QN44_SELML (Polyprenol reductase (Fragment) n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QN44_SELML) HSP 1 Score: 82.0 bits (201), Expect = 2.090e-15 Identity = 48/118 (40.68%), Postives = 61/118 (51.69%), Query Frame = 1 Query: 145 LFVVGFVRQHEAIRHLASLRGPPGRAGDGSSKTNVANTYAIPTEGWFQHVSSAHYLSELLVYSAFVLLGSFKGRGLGQGYLVAFAWVFANHSLVAGRTHAWYQQKFEDYPRERKRLIP 498 LF+ G+ Q++ + L S P +G+G TY IP WF VS AHYLSE+++Y V F G AWVF+N L A TH WY KFE+YP+ RK LIP Sbjct: 228 LFLWGWYHQYKCHQILVSA---PQESGEGK-------TYVIPYGDWFDKVSCAHYLSEIVMYFGLV----FASGGTQATIWFLLAWVFSNLYLAAKETHEWYLSKFENYPKNRKALIP 331
BLAST of mRNA_H-canaliculatus_F_contig11587.1400.1 vs. uniprot
Match: A0A553PKI2_TIGCA (Polyprenol reductase n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PKI2_TIGCA) HSP 1 Score: 82.8 bits (203), Expect = 2.400e-15 Identity = 42/124 (33.87%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 133 VAVGLFVVGFVRQHEAIRHLASLRGPPGRAGDGSSKTNVANTYAIPTEGWFQHVSSAHYLSELLVYSAFVLLGSFKGRGLGQGYLVAFAWVFANHSLVAGRTHAWYQQKFEDYPRERKRLIPGV 504 +AV +F Q++A + L++LR K +++Y+IP WF++VS HY +E+++Y F ++ K Q L+ F WV N ++ + +H WYQ KFE+YPR+RK +IP + Sbjct: 431 IAVAVFFWAGYHQNKAHQILSNLR-----------KGKSSSSYSIPRGDWFEYVSCPHYTAEVIIYGCFSIILGIKH----QTGLLIFIWVLINQTIASLMSHFWYQDKFENYPRQRKSIIPLI 539
BLAST of mRNA_H-canaliculatus_F_contig11587.1400.1 vs. uniprot
Match: A0A833VHB6_9POAL (Polyprenol reductase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VHB6_9POAL) HSP 1 Score: 79.3 bits (194), Expect = 2.070e-14 Identity = 47/140 (33.57%), Postives = 67/140 (47.86%), Query Frame = 1 Query: 88 PALVAVAGSVSFRHAVAVGLFVVGFVRQHEAIRHLASLRGPPGRAGDGSSKTNVANTYAIPTEGWFQHVSSAHYLSELLVYSAFVLLGSFKGRGLGQGYLVAFAWVFANHSLVAGRTHAWYQQKFEDYPRERKRLIPGVW 507 P LV S+ + V +F G+ Q L SLR G A Y +P WF +VS HY +E+++Y+ ++ G + F +V AN SL A TH WY+QKFEDYPR R+ +IP ++ Sbjct: 213 PGLVGPLFSLGWCQWVGAAVFFWGWFHQLRCHSILGSLRENKG-----------AEEYIVPYGDWFSYVSCPHYFAEIVIYAGILVASG----GNDVTVWLLFIFVVANLSLAAAETHRWYKQKFEDYPRTRRAIIPFIY 337 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11587.1400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11587.1400.1 >prot_H-canaliculatus_F_contig11587.1400.1 ID=prot_H-canaliculatus_F_contig11587.1400.1|Name=mRNA_H-canaliculatus_F_contig11587.1400.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=169bp MVLTVLVEAPPLAYSSNYNSYNNAPGFGPALVAVAGSVSFRHAVAVGLFVback to top mRNA from alignment at H-canaliculatus_F_contig11587:55..1178+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11587.1400.1 ID=mRNA_H-canaliculatus_F_contig11587.1400.1|Name=mRNA_H-canaliculatus_F_contig11587.1400.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1124bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11587:55..1178+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11587:55..1178+ >mRNA_H-canaliculatus_F_contig11587.1400.1 ID=mRNA_H-canaliculatus_F_contig11587.1400.1|Name=mRNA_H-canaliculatus_F_contig11587.1400.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1014bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11587:55..1178+ (Hapterophycus canaliculatus Oshoro5f female)back to top |