mRNA_H-canaliculatus_F_contig11586.1399.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11586.1399.1
Unique NamemRNA_H-canaliculatus_F_contig11586.1399.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11586.1399.1 vs. uniprot
Match: D7G170_ECTSI (Serine/threonine-protein kinase CTR1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G170_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 2.670e-76
Identity = 116/138 (84.06%), Postives = 126/138 (91.30%), Query Frame = 1 
Query:    1 QTNPPHVVELLGAGFTPEGRRFLLLEHLPEGTLGTFHALSAKEEMRGPSAYWTLKQGFRRLTKDLRYTLGNLLQVAEALQYLHNDAIPGAVVIHRDIRPDNVGLARGLVVKIFDFGLSRAIVKGHTMVGEVGSLRCAS 414
            Q N PHVVELLGAGFT EGRRFLLLEHLPEGTLGTFHALS +E+MRGPSAY TLKQGFRRLTKDL YTLG +LQVAEALQYLHNDAIPGAVV+HRDIRPDN+GLARG  VK+FDFGLS+AI KGH++VGE GSLR A+
Sbjct:   83 QVNHPHVVELLGAGFTHEGRRFLLLEHLPEGTLGTFHALSDREQMRGPSAYRTLKQGFRRLTKDLNYTLGRVLQVAEALQYLHNDAIPGAVVLHRDIRPDNIGLARGDAVKMFDFGLSKAIAKGHSLVGEAGSLRYAA 220
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BLAST of mRNA_H-canaliculatus_F_contig11586.1399.1 vs. uniprot
Match: A0A6H5JM84_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM84_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 6.510e-41
Identity = 69/86 (80.23%), Postives = 78/86 (90.70%), Query Frame = 1 
Query:  157 TLKQGFRRLTKDLRYTLGNLLQVAEALQYLHNDAIPGAVVIHRDIRPDNVGLARGLVVKIFDFGLSRAIVKGHTMVGEVGSLRCAS 414
            TLKQGFRRLTKDL YTLG +LQVAEALQYLHNDAIPGAVV+HRD+RPDN+GL  G VVK+FDFGLS+AI KGH++VGE GSLR A+
Sbjct:   90 TLKQGFRRLTKDLNYTLGRVLQVAEALQYLHNDAIPGAVVLHRDVRPDNIGLGHGDVVKMFDFGLSKAIAKGHSLVGEAGSLRYAA 175
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BLAST of mRNA_H-canaliculatus_F_contig11586.1399.1 vs. uniprot
Match: A0A7S2S189_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S189_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.140e-19
Identity = 53/146 (36.30%), Postives = 78/146 (53.42%), Query Frame = 1 
Query:    1 QTNPPHVVELLGAGFTPEGRRFLLLEHLPEGTLGTFHALSAKEEMRGPSAYWTLKQGFRRLTKDLRYTLGNLLQ----VAEALQYLHNDAIPGAVVIHRDIRPDNVGLARGLVVKIFDFGLSRAIVKG-------HTMVGEVGSLR 405
            Q    H+V L GAG T +G RF++LE L  G+L        +           ++   RR  K   +T   +L+    +AEA++YLH+DAIPG +V+HRD++PDN+G      +K+ DFGL+R +          + M GE GSLR
Sbjct:  431 QLQHSHIVSLCGAGLTSKGSRFMVLERLDGGSLTQVLGYDTR-----------IRDRRRRFWKKKHFTYVEVLKCARSIAEAMEYLHSDAIPGCMVLHRDLKPDNIGFTLDGTIKLIDFGLARVVENSSPDTDELYEMSGETGSLR 565
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BLAST of mRNA_H-canaliculatus_F_contig11586.1399.1 vs. uniprot
Match: A0A7S2LY51_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LY51_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.160e-19
Identity = 55/137 (40.15%), Postives = 74/137 (54.01%), Query Frame = 1 
Query:   13 PHVVELLGAGFTPEGRRFLLLEHLPEGTLGTFHALSAKEEMRGPSAYWTLKQGFRRLTKDLRYTLGNLLQVAEALQYLHNDAIPGAVVIHRDIRPDNVGLARGLVVKIFDFGLSRAIVKG------HTMVGEVGSLR 405
            P++V+L+GAGFTP G RF++LE L  GTL        +   R    +   K  +  + K  R        +AEAL Y H  AIP A+V+HRD++PDNVG      VK+ DFGL+R +         + M GE GSLR
Sbjct:  545 PNIVKLIGAGFTPRGVRFVVLERLDGGTLTQLLGYDTRIRDRRRRFWAKKKISYMDVLKCAR-------SLAEALAYCHGRAIPNAMVLHRDLKPDNVGFTLDGTVKLIDFGLARTVENATISNDVYEMSGETGSLR 674
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BLAST of mRNA_H-canaliculatus_F_contig11586.1399.1 vs. uniprot
Match: A0A812VMW4_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VMW4_SYMMI)

HSP 1 Score: 90.5 bits (223), Expect = 9.760e-19
Identity = 56/137 (40.88%), Postives = 75/137 (54.74%), Query Frame = 1 
Query:   13 PHVVELLGAGFTPEGRRFLLLEHLPEGTLGTFHALSAKEEMRGPSAYWTLKQGFRRLTKDLRYTLGNLLQVAEALQYLHNDAIPGAVVIHRDIRPDNVGLARGLVVKIFDFGLSRAIVKGHT------MVGEVGSLR 405
            PH+V L+GAG  P  RRF++LEHL  G+L +   L  ++  +G S     ++ F++ T      L     +A A  YLHN+   GA VIHRDI+PDN+G      VK+FDFGL   + K  T      M G  GSLR
Sbjct:  245 PHIVRLIGAGRMP--RRFIVLEHLGGGSLNS--VLGERDRKKGLS-----QKLFKKSTFSYDGLLAMARDIAAAFHYLHNNVHEGATVIHRDIKPDNIGFTSSGEVKLFDFGLCTCVRKRTTTDEAYEMTGNTGSLR 372
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BLAST of mRNA_H-canaliculatus_F_contig11586.1399.1 vs. uniprot
Match: D8LJM0_ECTSI (Serine/threonine-protein kinase CTR1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM0_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 3.470e-18
Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = 1 
Query:   16 HVVELLGAGFTPEGRRFLLLEHLPEGTLGTFHALSAKEEMRGPSAYWTLKQGFRRLTKDLRYTLGNLLQVAEALQYLHNDAIPGAVVIHRDIRPDNVGLARGLVVKIFDFGLSRAI-------VKGHTMVGEVGSLR 405
            ++V LLGAGF P+GRRF+ LE+L  GTL +      +E    P           R++K L  +L     +  AL+YLH+ A+PG +V HRD++PDN+G A+   +K+ DFGL + I        + + M G  GSLR
Sbjct:  401 NIVSLLGAGFLPDGRRFVALEYLSGGTLSSL----LREHREKPM----------RISKVLDLSLA----LCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLR 519
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BLAST of mRNA_H-canaliculatus_F_contig11586.1399.1 vs. uniprot
Match: A0A6H5JJI7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI7_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 3.490e-18
Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = 1 
Query:   16 HVVELLGAGFTPEGRRFLLLEHLPEGTLGTFHALSAKEEMRGPSAYWTLKQGFRRLTKDLRYTLGNLLQVAEALQYLHNDAIPGAVVIHRDIRPDNVGLARGLVVKIFDFGLSRAI-------VKGHTMVGEVGSLR 405
            ++V LLGAGF P+GRRF+ LE+L  GTL +      +E    P           R++K L  +L     +  AL+YLH+ A+PG +V HRD++PDN+G A+   +K+ DFGL + I        + + M G  GSLR
Sbjct:  448 NIVSLLGAGFLPDGRRFVALEYLSGGTLSSL----LREHREKPM----------RISKVLDLSLA----LCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSLR 566
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BLAST of mRNA_H-canaliculatus_F_contig11586.1399.1 vs. uniprot
Match: A0A7R9WTW5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WTW5_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 4.230e-18
Identity = 54/140 (38.57%), Postives = 77/140 (55.00%), Query Frame = 1 
Query:    7 NPPHVVELLGAGFTPEGRRFLLLEHLPEGTLGTFHALSAKEEMRGPSAYWTLKQGFRRLTKDLRYTLGNLLQVAEALQYLHNDAIPGAVVIHRDIRPDNVGLARGLVVKIFDFGLSRAIVKG-------HTMVGEVGSLR 405
            N  +VVEL+GAG T +G RF++LE L  G+L        +   R    +W  K         LRY       +A A++Y H DA+PG+ V+HRD++PDN+G A    +K+FDFGL+R +          ++M GE GSLR
Sbjct:  257 NHLNVVELIGAGTTSKGVRFVVLERLDGGSLTQLLGYDTRIRDRR-RRFWKKKS--IAYVDVLRYARS----IASAMRYCHEDAVPGSTVLHRDLKPDNIGFALDGTLKVFDFGLARLLENSNAKTDEKYSMSGETGSLR 389
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BLAST of mRNA_H-canaliculatus_F_contig11586.1399.1 vs. uniprot
Match: A0A6H5JZF2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZF2_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 4.580e-18
Identity = 56/138 (40.58%), Postives = 77/138 (55.80%), Query Frame = 1 
Query:   13 PHVVELLGAGFTPEGRRFLLLEHLPEGTLGTFHALSAKEEMRGPSAYWTLKQGFRRLTK-DLRYTLGNLLQVAEALQYLHNDAIPGAVVIHRDIRPDNVGLARGLVVKIFDFGLSRAIVKG------HTMVGEVGSLR 405
            P++V LLGAG  PE   FLL+E L  GTL      + K   R        ++ FR + +      L   LQ+AEALQY+HN+A+PG +V+HRD++PDN+G      +K+ D GL R + K       + M GE GSLR
Sbjct:  340 PNIVRLLGAGTRPEP--FLLIERLDGGTLAQRCGNAVKVRDR--------RRRFRHIRQFTYEELLRQGLQLAEALQYMHNEAMPGKLVVHRDLKPDNIGFDSQGNLKLIDLGLGRVVSKAADDKATYQMTGETGSLR 467
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BLAST of mRNA_H-canaliculatus_F_contig11586.1399.1 vs. uniprot
Match: A0A6V1S4W8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S4W8_HETAK)

HSP 1 Score: 88.2 bits (217), Expect = 1.170e-17
Identity = 57/146 (39.04%), Postives = 83/146 (56.85%), Query Frame = 1 
Query:   13 PHVVELLGAGFTPEGRRFLLLEHLPEGTL-----GTFHALSAKEEMRGPSAYWTLKQGFRRLTKDLRYTLGNLLQVAEALQYLHNDAIPGAVVIHRDIRPDNVGLAR----GLVVKIFDFGLSRAIVKG------HTMVGEVGSLR 405
            P+VVE+ GAGF PE  RF++LE L  GTL     G  H +   ++ R P +Y           + L+Y      Q A AL+YLH DAIPG V IHRD++P N+G       G+V+K+ DFGL++++ +G      + + G+ GS+R
Sbjct:  283 PNVVEIYGAGFNPE--RFIVLERLDGGTLTEVGGGASHGIGPMKK-RKPFSY----------LETLQYAR----QFAAALRYLHEDAIPGYVTIHRDLKPGNIGFKLLPNGGMVLKLMDFGLAKSVPRGEAAGQTYQLSGDTGSVR 411
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11586.1399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G170_ECTSI2.670e-7684.06Serine/threonine-protein kinase CTR1 n=1 Tax=Ectoc... [more]
A0A6H5JM84_9PHAE6.510e-4180.23Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S2S189_9STRA1.140e-1936.30Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2LY51_9STRA2.160e-1940.15Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A812VMW4_SYMMI9.760e-1940.88Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
D8LJM0_ECTSI3.470e-1838.69Serine/threonine-protein kinase CTR1 n=1 Tax=Ectoc... [more]
A0A6H5JJI7_9PHAE3.490e-1838.69Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7R9WTW5_9STRA4.230e-1838.57Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A6H5JZF2_9PHAE4.580e-1840.58Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6V1S4W8_HETAK1.170e-1739.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11586contigH-canaliculatus_F_contig11586:49..3460 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score237.3
Seed ortholog evalue4.4e-60
Seed eggNOG ortholog2880.D7G170
KEGG koko:K14304
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
KEGG ModuleM00427
GOsGO:0000323,GO:0000902,GO:0000904,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005795,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006914,GO:0006928,GO:0006935,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007528,GO:0008088,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009267,GO:0009605,GO:0009653,GO:0009894,GO:0009987,GO:0009991,GO:0010008,GO:0010506,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010970,GO:0010975,GO:0010977,GO:0012505,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016197,GO:0016241,GO:0016301,GO:0016310,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0017016,GO:0017137,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019899,GO:0022008,GO:0022603,GO:0022604,GO:0023052,GO:0030030,GO:0030100,GO:0030154,GO:0030182,GO:0030424,GO:0030425,GO:0030705,GO:0031090,GO:0031175,GO:0031267,GO:0031323,GO:0031329,GO:0031344,GO:0031345,GO:0031410,GO:0031594,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032418,GO:0032501,GO:0032502,GO:0032879,GO:0032886,GO:0032989,GO:0032990,GO:0033036,GO:0033043,GO:0033267,GO:0033554,GO:0034613,GO:0034976,GO:0035556,GO:0036211,GO:0036465,GO:0036477,GO:0040007,GO:0040011,GO:0042147,GO:0042221,GO:0042330,GO:0042594,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043195,GO:0043198,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043679,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046907,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048489,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048846,GO:0048856,GO:0048858,GO:0048869,GO:0050767,GO:0050768,GO:0050773,GO:0050774,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050896,GO:0051020,GO:0051049,GO:0051093,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051493,GO:0051640,GO:0051641,GO:0051645,GO:0051646,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051683,GO:0051716,GO:0051960,GO:0051961,GO:0060284,GO:0060341,GO:0060548,GO:0060560,GO:0060627,GO:0061174,GO:0061564,GO:0061845,GO:0061919,GO:0065007,GO:0065008,GO:0070507,GO:0070727,GO:0071212,GO:0071496,GO:0071704,GO:0071840,GO:0090128,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097485,GO:0097708,GO:0098588,GO:0098657,GO:0098693,GO:0098791,GO:0098793,GO:0098805,GO:0098852,GO:0099003,GO:0099111,GO:0099174,GO:0099504,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:1900242,GO:1901214,GO:1901215,GO:1901564,GO:1902115,GO:1902284,GO:1903421,GO:1990033,GO:1990138,GO:2000026,GO:2000171,GO:2000331,GO:2000785
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine-protein kinase CTR1
Ec32 orthologEc-02_001250.1
Exons4
Model size414
Cds size414
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11586.1399.1prot_H-canaliculatus_F_contig11586.1399.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11586 49..3460 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928849.6947644-CDS-H-canaliculatus_F_contig11586:48..2031622928849.6947644-CDS-H-canaliculatus_F_contig11586:48..203Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11586 49..203 +
1696845588.0380628-CDS-H-canaliculatus_F_contig11586:48..2031696845588.0380628-CDS-H-canaliculatus_F_contig11586:48..203Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11586 49..203 +
1622928849.7132864-CDS-H-canaliculatus_F_contig11586:1477..15871622928849.7132864-CDS-H-canaliculatus_F_contig11586:1477..1587Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11586 1478..1587 +
1696845588.0507822-CDS-H-canaliculatus_F_contig11586:1477..15871696845588.0507822-CDS-H-canaliculatus_F_contig11586:1477..1587Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11586 1478..1587 +
1622928849.7278402-CDS-H-canaliculatus_F_contig11586:2706..27741622928849.7278402-CDS-H-canaliculatus_F_contig11586:2706..2774Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11586 2707..2774 +
1696845588.0587542-CDS-H-canaliculatus_F_contig11586:2706..27741696845588.0587542-CDS-H-canaliculatus_F_contig11586:2706..2774Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11586 2707..2774 +
1622928849.7389877-CDS-H-canaliculatus_F_contig11586:3379..34601622928849.7389877-CDS-H-canaliculatus_F_contig11586:3379..3460Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11586 3380..3460 +
1696845588.0668342-CDS-H-canaliculatus_F_contig11586:3379..34601696845588.0668342-CDS-H-canaliculatus_F_contig11586:3379..3460Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11586 3380..3460 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11586.1399.1

>prot_H-canaliculatus_F_contig11586.1399.1 ID=prot_H-canaliculatus_F_contig11586.1399.1|Name=mRNA_H-canaliculatus_F_contig11586.1399.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=138bp
QTNPPHVVELLGAGFTPEGRRFLLLEHLPEGTLGTFHALSAKEEMRGPSA
YWTLKQGFRRLTKDLRYTLGNLLQVAEALQYLHNDAIPGAVVIHRDIRPD
NVGLARGLVVKIFDFGLSRAIVKGHTMVGEVGSLRCAS
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mRNA from alignment at H-canaliculatus_F_contig11586:49..3460+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11586.1399.1 ID=mRNA_H-canaliculatus_F_contig11586.1399.1|Name=mRNA_H-canaliculatus_F_contig11586.1399.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3412bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11586:49..3460+ (Hapterophycus canaliculatus Oshoro5f female)
CAGACCAACCCCCCGCACGTGGTCGAACTTCTCGGCGCGGGTTTCACGCC
GGAAGGCAGGCGTTTTCTTCTGCTGGAGCACCTTCCCGAGGGCACTCTCG
GAACGTTCCACGCCCTCAGCGCCAAGGAAGAGATGCGCGGTCCATCGGCC
TACTGGTGAGGCAACGTATTCTTCGCTCATCTCTTTTGCTCGTCAGGGTT
GCAAAAATCAGTGTTGAGGGCTGTATGCCTTCTTTCCCAAAACGTCGTTT
TCGCTTCAAATGATCCTGTTTTCAGGAGGAGTCGACGCTAAAAGCACGCC
GGAGGTCGCCGGAGGTCGCCCACGTGCAAAAAAAAAAGGGAGCAGAGAAA
GTGTGGGGGGAAATTTAGACATGAAAAGTAGATCGACGAGAAATGAGTCT
CGATTTTATTCGTCGTCGTTCCCTTGTCTGTGTCCTCTGCAATTTTCTAA
GATCTGCCCGCTGTCTTTCTTTTTGGTCGCCGCCATCCTCCAGAGCAGGG
AAGCCGAGTGTGGCCCGATGGTGCCGTAGATAGCGGGTTGATGACTGCTC
GCCGACGAAATCCTCGCGCGATGCACGGTTTTCTAATCGCTGCTTGGCAT
TCGTCCTCTACAGAAGTACAGCAGTATCTATATTTTTGTGTTATCAAACT
ATAAATATAATACTCGAAGTAGTACGTTTTTTTTTTATGCTCTTGGGCAC
TTTCCGCGGCACCGTTCCGGTGGCCTGCGAGAGGTTACCCAGCGTCAGAG
ATCCTGACGAATCTGGCCAGGTTCTGGCTCTCGGGCGTGTTGACTGGTCG
TTGCGTTTCAGCCCACCAGAGGTACCGTGTATCGAAACTCCCCATTCTCC
CTTCGCTCTCCCCCCGTCCCCTCACCAACCGGCGCCCAAGTAGCCCCCCC
CCTCCCTCGCCCCCGCACCCCCCAAAAAAGAAGAGAAAATAACGTCGGGT
CCGTGGGACGTAAAGTGTTGATCAAATTGTCATGTTTGTCTTGTGCTTCT
TGGAAGCTGAGGCAGCAGCAGGGAACAGTCCAGAGGGTCAGTGCATACAT
TTATCTATACCCTTTGTTGAAAAGTACAAAAAAAAACACCGTGGGAAGTC
CTCCTGAGGCACGTCGTAGGAGGCGTGTGTCGAGGCTTCTGTTGAGTTTC
CAAACACTGAGGGTTCATGGATGTGTAAGGTAAATCTTTTCTTGATTCTT
TGATTCCCTTTTGCTGTGCCGGACGTTTCCAAAATGCCGTCTCGGGCGTC
CTGTTCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGC
TGTTGTTGCTGTTGTTGTTGCTGCTGCTGCTTCCATCCCTTGTGCGGCGC
TTGTCGCATGCTTCCGACAACCTCGATGACGTCGTTGTTTTCTCGCCGCT
GCCGTCGTCGATGCCGTTGCGGTCCCCAGGACGCTCAAGCAGGGGTTCCG
GCGCCTGACGAAGGACCTGAGGTACACCCTGGGCAACCTGCTGCAGGTGG
CGGAGGCCCTGCAGTATCTCCACAACGACGCGATCCCAGGTACAGATGAC
GAGCCAAAAAAGAAAAATGGGACAGAAAGGGCGAGCGGTCTCTGCGGATG
GACGTGCTCGCACGATCAAGGAGTGAGCTCAACATTATTTTTTTCTGAAA
GAGTCAGCAATCGCTGATGTTGTTTGTGTCCACATTAAAAGTTCCGCCTC
AGCAGACCTTATTCCGTGGTCACAAGCCGCCCCCCGAAAAATGGTGTACG
CTCCTTTGGAGTGAGGGGGAGAGGAAAAATGGACCCAGACAAGTCGCACA
CAACAATCCCTCGTGACGAAAAACAGAGGAAGAGAAATATGGAAGTTGAG
GAATGAGCCAACAAGCAACAGCGAAGGAATGCCCCCCTCTGAGGAAGAGT
ATACTTCAGGCGATCAGGGGGGGTCGTGTTGAGTGCCTTGCGGGGAGGGT
TCTTTCAGAATGGTGGGAAAACGTCTTACGCGTGTCAGGAGAGACGGAGG
GCGGGAACCGCGTTTTGTTTCGATGCTGGAGCGAGCGATGAGCGCGGAAC
GGCGGAAAGACATGGATCCTTGATGTTGTCGATGTCGATGGTGGTGGTGT
TGATGCTGATGGTGGTGTTGATGTTGATGTCGTTGTTGATGTTGATGGTG
GTGTTGATGTCGTTGTTGATGTTGATGGTGGTGTTGATGTTGATGTCGAT
GTTGATGTCGATGTTGATGTCGATGTCGATGTCGATGTCGATGTTGATGT
CGATGTCGATGTCGTTGTTGATGTTGATGTCGATGTCGATGTCGATGTGC
TCTGACGTAACGGGCAAAAAGAGCAACGGTCGGACGAACCGGACCGCTGC
TCCTGCTGGGTGTGAAGGAGCACGATGCCGAAGAGGCCCCTGTCCATTTG
CTTGCTTTGCGTTCCTACTGTGCAGAGTCTCAAGAAAAATATCATGAAAT
TGATTTGGGGTTACGGGGGGCAACCGATGCACCGCAAGATGCGCCGAATG
AAGGGAAAAAGACGCAGAATCGGTGAGCTGGTCCTTCTATCCCCCCCGGT
CCCTCCCTCTCCCATCGCCTCCTTCTCTCGCTCTCTCCCTCGCCCCCCTC
ACCGCGATGCCAACCTTGCGCGTTTGTCGTAACGTGCGGTGGCCGTCTCG
ACTTCAAGGTGCGGTGGTTATTCACCGCGACATCAGACCAGACAACGTGG
GACTCGCGAGGGGCTTGGTCGTGAAGGTAACTTGGGGTTCGTTTTCGGGC
GGGATGTGGGGAGGGGGGGGGGGGGCACGGTGAGTCGAATGCAAAGTGGA
CTCAGGGCCAGAGTAAGGTGCGAAAGACTTGGCCTCTGTTGACTTAAGTC
ACGCCAGATAGCGGTCGGTTCCTTGTTGGCGGGCTTGGTTTGGAGAGATT
CTTCGCATCCCCGGGGTTGAGAGACCCCTCCCCCCTCCCCCGATCTGTCC
TCGCGCGTGTCTTACGTGTGCGCCTGCCTGTCTGCTGTGTCTCTCGCCGA
CTGCTCACGAGCAGAGGTCGACAGCACCGTTTGCTTGGCCGCCGGTGCGT
CCATGCCCCCCCCCCCCTCCGCGCCCTGCCCCCTTCTGTCAACAAACCCC
TTTGTCCTGTTGCCAAGGGATGCTTGTGCTTTGCTGTTCCAGCTTCGTTG
TCTGCTAGGGTTCCGATCTTCGCGTAGCGAAGGTCATGGTGAGTATCAAT
TGAGTCGTGAACCGACCCGTGCCCCCTTGTCCGTCCATCCGCATGTCCCT
CCCCCCTTGTACACCTCTCTGCGTCGCCCCTCGTCCGGCGCTTTTTGCCC
GACGTTTTCCCTACTATTTTTTTCGTTTCAGATTTTCGACTTCGGGCTAT
CGAGAGCAATCGTCAAGGGCCACACTATGGTCGGAGAGGTCGGGAGCCTA
AGGTGCGCGTCC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11586:49..3460+

>mRNA_H-canaliculatus_F_contig11586.1399.1 ID=mRNA_H-canaliculatus_F_contig11586.1399.1|Name=mRNA_H-canaliculatus_F_contig11586.1399.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=828bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11586:49..3460+ (Hapterophycus canaliculatus Oshoro5f female)
CAGACCAACCCCCCGCACGTGGTCGAACTTCTCGGCGCGGGTTTCACGCC
GGAAGGCAGGCGTTTTCTTCTGCTGGAGCACCTTCCCGAGGGCACTCTCG
GAACGTTCCACGCCCTCAGCGCCAAGGAAGAGATGCGCGGTCCATCGGCC
TACTGCAGACCAACCCCCCGCACGTGGTCGAACTTCTCGGCGCGGGTTTC
ACGCCGGAAGGCAGGCGTTTTCTTCTGCTGGAGCACCTTCCCGAGGGCAC
TCTCGGAACGTTCCACGCCCTCAGCGCCAAGGAAGAGATGCGCGGTCCAT
CGGCCTACTGGACGCTCAAGCAGGGGTTCCGGCGCCTGACGAAGGACCTG
AGGTACACCCTGGGCAACCTGCTGCAGGTGGCGGAGGCCCTGCAGTATCT
CCACAACGACGCGATCCCAGGACGCTCAAGCAGGGGTTCCGGCGCCTGAC
GAAGGACCTGAGGTACACCCTGGGCAACCTGCTGCAGGTGGCGGAGGCCC
TGCAGTATCTCCACAACGACGCGATCCCAGGTGCGGTGGTTATTCACCGC
GACATCAGACCAGACAACGTGGGACTCGCGAGGGGCTTGGTCGTGAAGGT
GCGGTGGTTATTCACCGCGACATCAGACCAGACAACGTGGGACTCGCGAG
GGGCTTGGTCGTGAAGATTTTCGACTTCGGGCTATCGAGAGCAATCGTCA
AGGGCCACACTATGGTCGGAGAGGTCGGGAGCCTAAGGTGCGCGTCCATT
TTCGACTTCGGGCTATCGAGAGCAATCGTCAAGGGCCACACTATGGTCGG
AGAGGTCGGGAGCCTAAGGTGCGCGTCC
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