mRNA_H-canaliculatus_F_contig11486.1311.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11486.1311.1
Unique NamemRNA_H-canaliculatus_F_contig11486.1311.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11486.1311.1 vs. uniprot
Match: D8LHC2_ECTSI (MEKK/MAPK-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHC2_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 9.710e-122
Identity = 185/225 (82.22%), Postives = 205/225 (91.11%), Query Frame = 1 
Query:    1 RWLRGDVIGEGAFGTVHMGLNLDTGELMAVKSISLDQGDMTPRDAKAFENEIAILRDNKHENIVRSFGSSVKGQQICIFLEYMPGGSVRHLLDRFGALEETMTLLYAKQLLRGLSFLHKNGVAHRDIKCANCLVDQRGAIKLADFGMSKRIVGLSGTSGSPGVQSVKGTPFWMAPEVLQVQDLRDGWMKADVWSLGATILEMASGSPPWGTIGPLAAMFKISCTR 675
            RWLRGD+IG GAFGTVH+GLNLDTGELMAVKSISLD+GDMT RDAKAFENE A+LRDN+HENIV+S+GSS+KG  + IFLEYMPGGSVR LLDRFG  EE +++LY +QL++GLSFLHKNGVAHRDIKCANCLV+QRGAIKLADFGMSKRIVGLSGT      QSVKGTPFWMAPEVLQVQDL+DGW+KADVWSLGAT+LEM +GSPPW  IGPLAAMFKISCTR
Sbjct:  298 RWLRGDIIGAGAFGTVHLGLNLDTGELMAVKSISLDRGDMTSRDAKAFENETAMLRDNRHENIVKSYGSSIKGNTMFIFLEYMPGGSVRGLLDRFGGFEEHISVLYTEQLMQGLSFLHKNGVAHRDIKCANCLVNQRGAIKLADFGMSKRIVGLSGTXXXXXXQSVKGTPFWMAPEVLQVQDLKDGWIKADVWSLGATVLEMLTGSPPWDNIGPLAAMFKISCTR 522
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BLAST of mRNA_H-canaliculatus_F_contig11486.1311.1 vs. uniprot
Match: A0A6H5K1K6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K6_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 5.880e-121
Identity = 186/225 (82.67%), Postives = 205/225 (91.11%), Query Frame = 1 
Query:    1 RWLRGDVIGEGAFGTVHMGLNLDTGELMAVKSISLDQGDMTPRDAKAFENEIAILRDNKHENIVRSFGSSVKGQQICIFLEYMPGGSVRHLLDRFGALEETMTLLYAKQLLRGLSFLHKNGVAHRDIKCANCLVDQRGAIKLADFGMSKRIVGLSGTSGSPGVQSVKGTPFWMAPEVLQVQDLRDGWMKADVWSLGATILEMASGSPPWGTIGPLAAMFKISCTR 675
            RWLRGD+IG GAFGTVH+GLNLDTGELMAVKSISLD+GDMT RDAKAFENEIA+LRDN+HENIV+S+GSS+KG  + IFLEYMPGGSVR LLDRFG  EE ++LLY +QL++GLSFLHKNGVAHRDIKCANCLV+Q GAIKLADFGMSKRIVGLSGT      QSVKGTPFWMAPEVLQVQDL+DGW+KADVWSLGAT+LEM +GSPPW  IGPLAAMFKISCTR
Sbjct:  270 RWLRGDIIGAGAFGTVHLGLNLDTGELMAVKSISLDRGDMTSRDAKAFENEIAMLRDNRHENIVKSYGSSIKGNTMFIFLEYMPGGSVRGLLDRFGGFEEHVSLLYTEQLMQGLSFLHKNGVAHRDIKCANCLVNQGGAIKLADFGMSKRIVGLSGTXXXXXXQSVKGTPFWMAPEVLQVQDLKDGWIKADVWSLGATVLEMLTGSPPWDNIGPLAAMFKISCTR 494
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BLAST of mRNA_H-canaliculatus_F_contig11486.1311.1 vs. uniprot
Match: F0YC78_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC78_AURAN)

HSP 1 Score: 236 bits (603), Expect = 6.110e-75
Identity = 117/231 (50.65%), Postives = 158/231 (68.40%), Query Frame = 1 
Query:    1 RWLRGDVIGEGAFGTVHMGLNLDTGELMAVKSISLDQGDMTPRDAKAFENEIAILRDNKHENIVRSFGSSVKGQQICIFLEYMPGGSVRHLLDRFGALEETMTLLYAKQLLRGLSFLHKNGVAHRDIKCANCLVDQRGAIKLADFGMSKRIVGLSGTSGSPGVQSV-----KGTPFWMAPEVLQVQDLRDGWMKADVWSLGATILEMASGSPPWGTIG-PLAAMFKISCTR 675
            RW RG++IG+GAFG+V++ LNLDTGELMAVK   LD  +++ R+  A ENE+++++   H NIVR  G       + IFLEY+PGGS+R LLD+FG LEE +  LY++Q+L GL +LH N +AHRDIK AN LV   G++KLADFG SKR+   S  +G   V ++     KGTP WMAPEV++      GW KADVWS+G T++EM++G PPW     P+ AM+ I+C  
Sbjct:    2 RWQRGEMIGKGAFGSVYLSLNLDTGELMAVKH--LDCAEVSSRERSALENEVSMMKGLCHPNIVRYLGVDSSNDALAIFLEYVPGGSLRSLLDKFGKLEEDIVRLYSRQILLGLEYLHGNAIAHRDIKAANVLVSNDGSVKLADFGASKRMAAPSNLNGGGAVGALQTGGAKGTPLWMAPEVIKAAPKSQGWRKADVWSVGCTVIEMSTGRPPWSQYSNPVTAMYHIACVE 230
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BLAST of mRNA_H-canaliculatus_F_contig11486.1311.1 vs. uniprot
Match: A0A7S0P7A6_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0P7A6_CAFRO)

HSP 1 Score: 234 bits (597), Expect = 4.050e-72
Identity = 115/225 (51.11%), Postives = 152/225 (67.56%), Query Frame = 1 
Query:    1 RWLRGDVIGEGAFGTVHMGLNLDTGELMAVKSISLDQGDMTPRDAKAFENEIAILRDNKHENIVRSFGSSVKGQQICIFLEYMPGGSVRHLLDRFGALEETMTLLYAKQLLRGLSFLHKNGVAHRDIKCANCLVDQRGAIKLADFGMSKRIVGLSGTSGSPGVQSVKGTPFWMAPEVLQVQDLRDGWMKADVWSLGATILEMASGSPPWGTIG-PLAAMFKISCT 672
            RW +G+ +G GA GTV  GLN+DTGELMA+K I  D  D++ R+  A E E+++LR  +H NIVR  G+  +G  +C+FLEY+PGGSV+ +L+RFG  EE +   Y + LL GL +LH+NG+AHRDIK  N LV   G IKLADFG SKRI        S     VKGTP WMAPEV++ Q+   GW +AD+WS+G T++EMA+G PPW     P+ AM+ I+ T
Sbjct:   12 RWRKGERLGAGAVGTVFQGLNVDTGELMAIKQI--DSADLSARELAALEQEVSLLRSFRHPNIVRYLGAQREGDTLCVFLEYVPGGSVKRVLERFGGFEEGLVRRYTRHLLVGLEYLHRNGIAHRDIKGGNVLVALDGVIKLADFGASKRISAPPLAGASRTGTGVKGTPQWMAPEVVREQEAETGWRRADIWSVGCTVIEMATGRPPWSEFANPVTAMYHIAVT 234
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BLAST of mRNA_H-canaliculatus_F_contig11486.1311.1 vs. uniprot
Match: A0A7S4E9F3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E9F3_9STRA)

HSP 1 Score: 240 bits (613), Expect = 1.660e-69
Identity = 118/226 (52.21%), Postives = 158/226 (69.91%), Query Frame = 1 
Query:    1 RWLRGDVIGEGAFGTVHMGLNLDTGELMAVKSISLDQGDMTPRDAKAFENEIAILRDNKHENIVRSFGSSVKGQQICIFLEYMPGGSVRHLLDRFGALEETMTLLYAKQLLRGLSFLHKNGVAHRDIKCANCLVDQRGAIKLADFGMSKRIVGLSGTSGSPGVQSVKGTPFWMAPEVLQVQDLRDGWMKADVWSLGATILEMASGSPPWGTIG-PLAAMFKISCTR 675
            RW RG+++G+GAFGTV++GLNLDTGELMAVK +  ++  ++ R+  A ENE+  L++  H NIVR  G   +   + IFLEY+ GGS+R LLDRFG LEE +  LYA+Q+L GL +LH NG+AHRD+K AN L+ Q G +KLADFG SKR   +SG++        KGTP WMAPEV++    ++ W KADVWS+G TI+EMA+G PPW     P+ AM+ I+C  
Sbjct:  270 RWQRGELVGKGAFGTVYLGLNLDTGELMAVKMLEAEE--VSSRERHALENEVRTLKNLGHPNIVRYLGVDSRSDTLAIFLEYVSGGSLRSLLDRFGRLEERVVRLYARQILLGLEYLHANGIAHRDVKAANALLSQDGIVKLADFGASKRTREVSGSTLHATGGHAKGTPLWMAPEVIKSTGPQNSWRKADVWSVGCTIIEMATGRPPWSQYSNPVTAMYHIACVE 493
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BLAST of mRNA_H-canaliculatus_F_contig11486.1311.1 vs. uniprot
Match: A0A5A8D7I1_CAFRO (Protein kinase domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D7I1_CAFRO)

HSP 1 Score: 234 bits (597), Expect = 3.470e-69
Identity = 115/225 (51.11%), Postives = 152/225 (67.56%), Query Frame = 1 
Query:    1 RWLRGDVIGEGAFGTVHMGLNLDTGELMAVKSISLDQGDMTPRDAKAFENEIAILRDNKHENIVRSFGSSVKGQQICIFLEYMPGGSVRHLLDRFGALEETMTLLYAKQLLRGLSFLHKNGVAHRDIKCANCLVDQRGAIKLADFGMSKRIVGLSGTSGSPGVQSVKGTPFWMAPEVLQVQDLRDGWMKADVWSLGATILEMASGSPPWGTIG-PLAAMFKISCT 672
            RW +G+ +G GA GTV  GLN+DTGELMA+K I  D  D++ R+  A E E+++LR  +H NIVR  G+  +G  +C+FLEY+PGGSV+ +L+RFG  EE +   Y + LL GL +LH+NG+AHRDIK  N LV   G IKLADFG SKRI        S     VKGTP WMAPEV++ Q+   GW +AD+WS+G T++EMA+G PPW     P+ AM+ I+ T
Sbjct:   62 RWRKGERLGAGAVGTVFQGLNVDTGELMAIKQI--DSADLSARELAALEQEVSLLRSFRHPNIVRYLGAQREGDTLCVFLEYVPGGSVKRVLERFGGFEEGLVRRYTRHLLVGLEYLHRNGIAHRDIKGGNVLVALDGVIKLADFGASKRISAPPLAGASRTGTGVKGTPQWMAPEVVREQEAETGWRRADIWSVGCTVIEMATGRPPWSEFANPVTAMYHIAVT 284
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BLAST of mRNA_H-canaliculatus_F_contig11486.1311.1 vs. uniprot
Match: A0A5A8CNV7_CAFRO (Protein kinase domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CNV7_CAFRO)

HSP 1 Score: 234 bits (597), Expect = 9.500e-68
Identity = 115/225 (51.11%), Postives = 152/225 (67.56%), Query Frame = 1 
Query:    1 RWLRGDVIGEGAFGTVHMGLNLDTGELMAVKSISLDQGDMTPRDAKAFENEIAILRDNKHENIVRSFGSSVKGQQICIFLEYMPGGSVRHLLDRFGALEETMTLLYAKQLLRGLSFLHKNGVAHRDIKCANCLVDQRGAIKLADFGMSKRIVGLSGTSGSPGVQSVKGTPFWMAPEVLQVQDLRDGWMKADVWSLGATILEMASGSPPWGTIG-PLAAMFKISCT 672
            RW +G+ +G GA GTV  GLN+DTGELMA+K I  D  D++ R+  A E E+++LR  +H NIVR  G+  +G  +C+FLEY+PGGSV+ +L+RFG  EE +   Y + LL GL +LH+NG+AHRDIK  N LV   G IKLADFG SKRI        S     VKGTP WMAPEV++ Q+   GW +AD+WS+G T++EMA+G PPW     P+ AM+ I+ T
Sbjct:  371 RWRKGERLGAGAVGTVFQGLNVDTGELMAIKQI--DSADLSARELAALEQEVSLLRSFRHPNIVRYLGAQREGDTLCVFLEYVPGGSVKRVLERFGGFEEGLVRRYTRHLLVGLEYLHRNGIAHRDIKGGNVLVALDGVIKLADFGASKRISAPPLAGASRTGTGVKGTPQWMAPEVVREQEAETGWRRADIWSVGCTVIEMATGRPPWSEFANPVTAMYHIAVT 593
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BLAST of mRNA_H-canaliculatus_F_contig11486.1311.1 vs. uniprot
Match: A0A5A8D8T0_CAFRO (Protein kinase domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D8T0_CAFRO)

HSP 1 Score: 234 bits (597), Expect = 2.180e-67
Identity = 115/225 (51.11%), Postives = 152/225 (67.56%), Query Frame = 1 
Query:    1 RWLRGDVIGEGAFGTVHMGLNLDTGELMAVKSISLDQGDMTPRDAKAFENEIAILRDNKHENIVRSFGSSVKGQQICIFLEYMPGGSVRHLLDRFGALEETMTLLYAKQLLRGLSFLHKNGVAHRDIKCANCLVDQRGAIKLADFGMSKRIVGLSGTSGSPGVQSVKGTPFWMAPEVLQVQDLRDGWMKADVWSLGATILEMASGSPPWGTIG-PLAAMFKISCT 672
            RW +G+ +G GA GTV  GLN+DTGELMA+K I  D  D++ R+  A E E+++LR  +H NIVR  G+  +G  +C+FLEY+PGGSV+ +L+RFG  EE +   Y + LL GL +LH+NG+AHRDIK  N LV   G IKLADFG SKRI        S     VKGTP WMAPEV++ Q+   GW +AD+WS+G T++EMA+G PPW     P+ AM+ I+ T
Sbjct:   62 RWRKGERLGAGAVGTVFQGLNVDTGELMAIKQI--DSADLSARELAALEQEVSLLRSFRHPNIVRYLGAQREGDTLCVFLEYVPGGSVKRVLERFGGFEEGLVRRYTRHLLVGLEYLHRNGIAHRDIKGGNVLVALDGVIKLADFGASKRISAPPLAGASRTGTGVKGTPQWMAPEVVREQEAETGWRRADIWSVGCTVIEMATGRPPWSEFANPVTAMYHIAVT 284
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11486.1311.1 vs. uniprot
Match: A0A7S1CQA9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQA9_9STRA)

HSP 1 Score: 232 bits (591), Expect = 1.790e-66
Identity = 114/224 (50.89%), Postives = 160/224 (71.43%), Query Frame = 1 
Query:    1 RWLRGDVIGEGAFGTVHMGLNLDTGELMAVKSISLDQGDMTPRDAKAFENEIAILRDNKHENIVRSFGSSVKGQQICIFLEYMPGGSVRHLLDRFGALEETMTLLYAKQLLRGLSFLHKNGVAHRDIKCANCLVDQRGAIKLADFGMSKRIVGLSGTSGSPGVQSVKGTPFWMAPEVLQVQDLRDGWMKADVWSLGATILEMASGSPPWGTIG-PLAAMFKISC 669
            RW RG+V+G GA+GTV++GLNLD+GELMAVK   LD  +++ ++  A E+E++++    HENIVR  G+    + + IFLEY+PGGS+R L++RFG L+E +  +Y +QLL GL +LH++G+AHRDIK AN LV   G IKLADFG SK++   S T+ +     +KGTP WMAPEV++ Q    GW KAD+WS+G T++EMA+G PPW     P+ AM+ I+C
Sbjct:  651 RWQRGEVLGAGAYGTVYLGLNLDSGELMAVKQ--LDTSEVSAKELLALEHEVSMMDRFDHENIVRYLGTEHTEETLSIFLEYVPGGSIRSLVNRFGKLDEAVVRVYTRQLLLGLEYLHRHGIAHRDIKGANVLVANDGTIKLADFGASKQLGHKSVTANT----GLKGTPLWMAPEVIKEQQSARGWKKADIWSVGCTVIEMATGKPPWSHFSNPVTAMYHIAC 868
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11486.1311.1 vs. uniprot
Match: A0A5A8EBT6_CAFRO (Protein kinase domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EBT6_CAFRO)

HSP 1 Score: 227 bits (579), Expect = 6.520e-65
Identity = 110/209 (52.63%), Postives = 144/209 (68.90%), Query Frame = 1 
Query:    1 RWLRGDVIGEGAFGTVHMGLNLDTGELMAVKSISLDQGDMTPRDAKAFENEIAILRDNKHENIVRSFGSSVKGQQICIFLEYMPGGSVRHLLDRFGALEETMTLLYAKQLLRGLSFLHKNGVAHRDIKCANCLVDQRGAIKLADFGMSKRIVGLSGTSGSPGVQSVKGTPFWMAPEVLQVQDLRDGWMKADVWSLGATILEMASGSPPW 627
            RW +G+ +G GA GTV  GLN+DTGELMA+K I  D  D++ R+  A E E+++LR  +H NIVR  G+  +G  +C+FLEY+PGGSV+ +L+RFG  EE +   Y + LL GL +LH+NG+AHRDIK  N LV   G IKLADFG SKRI        S     VKGTP WMAPEV++ Q+   GW +AD+WS+G T++EMA+G PPW
Sbjct:   60 RWRKGERLGAGAVGTVFQGLNVDTGELMAIKQI--DSADLSARELAALEQEVSLLRSFRHPNIVRYLGAQREGDTLCVFLEYVPGGSVKRVLERFGGFEEGLVRRYTRHLLVGLEYLHRNGIAHRDIKGGNVLVALDGVIKLADFGASKRISAPPLAGASRTGTGVKGTPQWMAPEVVREQEAETGWRRADIWSVGCTVIEMATGRPPW 266
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11486.1311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHC2_ECTSI9.710e-12282.22MEKK/MAPK-like n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5K1K6_9PHAE5.880e-12182.67Protein kinase domain-containing protein n=1 Tax=E... [more]
F0YC78_AURAN6.110e-7550.65Protein kinase domain-containing protein (Fragment... [more]
A0A7S0P7A6_CAFRO4.050e-7251.11Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A7S4E9F3_9STRA1.660e-6952.21Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A5A8D7I1_CAFRO3.470e-6951.11Protein kinase domain-containing protein n=1 Tax=C... [more]
A0A5A8CNV7_CAFRO9.500e-6851.11Protein kinase domain-containing protein n=1 Tax=C... [more]
A0A5A8D8T0_CAFRO2.180e-6751.11Protein kinase domain-containing protein n=1 Tax=C... [more]
A0A7S1CQA9_9STRA1.790e-6650.89Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A5A8EBT6_CAFRO6.520e-6552.63Protein kinase domain-containing protein n=1 Tax=C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11486contigH-canaliculatus_F_contig11486:844..3580 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score386.3
Seed ortholog evalue9.5e-105
Seed eggNOG ortholog2880.D8LHC2
EggNOG free text desc.MAP kinase kinase kinase activity
EggNOG OGsKOG0198@1,KOG0198@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMEKK/MAPK-like
Ec32 orthologEc-24_001340.1
Exons5
Model size678
Cds size678
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11486.1311.1prot_H-canaliculatus_F_contig11486.1311.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11486 844..3580 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928835.4407933-CDS-H-canaliculatus_F_contig11486:843..9841622928835.4407933-CDS-H-canaliculatus_F_contig11486:843..984Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11486 844..984 -
1696845582.6152415-CDS-H-canaliculatus_F_contig11486:843..9841696845582.6152415-CDS-H-canaliculatus_F_contig11486:843..984Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11486 844..984 -
1622928835.5063326-CDS-H-canaliculatus_F_contig11486:1310..13911622928835.5063326-CDS-H-canaliculatus_F_contig11486:1310..1391Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11486 1311..1391 -
1696845582.627587-CDS-H-canaliculatus_F_contig11486:1310..13911696845582.627587-CDS-H-canaliculatus_F_contig11486:1310..1391Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11486 1311..1391 -
1622928835.524082-CDS-H-canaliculatus_F_contig11486:2161..22331622928835.524082-CDS-H-canaliculatus_F_contig11486:2161..2233Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11486 2162..2233 -
1696845582.636086-CDS-H-canaliculatus_F_contig11486:2161..22331696845582.636086-CDS-H-canaliculatus_F_contig11486:2161..2233Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11486 2162..2233 -
1622928835.5388958-CDS-H-canaliculatus_F_contig11486:2887..30951622928835.5388958-CDS-H-canaliculatus_F_contig11486:2887..3095Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11486 2888..3095 -
1696845582.6487167-CDS-H-canaliculatus_F_contig11486:2887..30951696845582.6487167-CDS-H-canaliculatus_F_contig11486:2887..3095Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11486 2888..3095 -
1622928835.5551324-CDS-H-canaliculatus_F_contig11486:3404..35801622928835.5551324-CDS-H-canaliculatus_F_contig11486:3404..3580Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11486 3405..3580 -
1696845582.6578386-CDS-H-canaliculatus_F_contig11486:3404..35801696845582.6578386-CDS-H-canaliculatus_F_contig11486:3404..3580Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11486 3405..3580 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11486.1311.1

>prot_H-canaliculatus_F_contig11486.1311.1 ID=prot_H-canaliculatus_F_contig11486.1311.1|Name=mRNA_H-canaliculatus_F_contig11486.1311.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=226bp
RWLRGDVIGEGAFGTVHMGLNLDTGELMAVKSISLDQGDMTPRDAKAFEN
EIAILRDNKHENIVRSFGSSVKGQQICIFLEYMPGGSVRHLLDRFGALEE
TMTLLYAKQLLRGLSFLHKNGVAHRDIKCANCLVDQRGAIKLADFGMSKR
IVGLSGTSGSPGVQSVKGTPFWMAPEVLQVQDLRDGWMKADVWSLGATIL
EMASGSPPWGTIGPLAAMFKISCTR*
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mRNA from alignment at H-canaliculatus_F_contig11486:844..3580-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11486.1311.1 ID=mRNA_H-canaliculatus_F_contig11486.1311.1|Name=mRNA_H-canaliculatus_F_contig11486.1311.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2737bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11486:844..3580- (Hapterophycus canaliculatus Oshoro5f female)
AGGTGGCTCAGAGGTGATGTCATCGGCGAGGGAGCGTTCGGCACGGTGCA
CATGGGCCTCAATCTCGACACCGGGGAGCTGATGGCGGTCAAGAGCATAT
CGTTGGACCAGGGGGACATGACCCCGCGAGACGCCAAGGCTTTCGAGAAC
GAGATTGCCATTCTTAGAGACAATAAGTGAGACACTTGAGGAGGTGGTGG
GAGCGACGGGGGCGAGAGGAGGAGATGGGAGGGGCGGGGGGGGCAGAGGG
GAAAGAAGGGGCTCTAGGAAACGTGGAAGGTCTGAGAGAAGAAATGGGAG
ATCTGAGAGTGGATGAAAGTGATTGTCTCCAAGATTAACCGTAGATCGCA
ACCCCATGGAGAAGCTCAAGGACAAAGCAGCCCCGGCGACGCAGAGTACA
TCCTGCAAAAGCTCAACAAGTAATCGACTGTTTGAGAGAGACTTCCCTCG
CCCCAATCCCTCGAACTCGACCTCCGAATCAAAAGGCACGAAAACATCGT
GAGGTCGTTCGGGAGCAGCGTCAAGGGCCAGCAGATCTGCATATTTCTGG
AGTACATGCCCGGGGGCTCCGTGCGTCACCTCCTTGACCGCTTCGGCGCT
CTGGAGGAGACGATGACTCTCCTGTACGCGAAGCAGCTCCTAAGGGGGCT
GAGCTTCCTGCACAAGAACGGGGTGGCGCATCGCGATATCAAGGTGTGCC
TGGTATGGCGACAGGTCTTCGCGTGCCGCCGGTTGGTCAGCCCCCTGACA
ACGGCTTCTGGCACTTCTCTAGTTTCATGTCCTTACTTTCGACTCGTTTC
CGGCACGCCGTGCTTTTTCCACGTTTATGTCCGGATTCCGGACTACCCCC
CCTCCGGTACGAAGTTAAGTGGAAGATTCCGTAGGTCTGGAGCCGGTCAA
TTTCTCCCCAGACATTTGGACGCTGGCCGGGGCATCTAAGGAGCTTAGAA
AGCAAGACCATCGTAATCATGACGCCAAACAATTCAGGAATGCTGTTGTT
GTTTTTCCTGTTATTGTCGTCGTCGGTGGTGGTGTTGCTTCCGTTGCCAT
TGTCCCTAGCGTTGTCACTTTTGTTGGAGAAGGCGCCGAAATTATCGTTG
GCTTCGCTTGGTACGACCGCACAGCTTGGAAGAAGCGACCGTCCATCATG
CACTGTTGACGTCGCCGTCATCCATTGCACTCACCCCCCCAACTCCTATG
GTCCGCCACTCTGTATCTGCCGACCCTTCGGTACAACACCGCGATGGCAC
CATCCTCGGGGCACCCTTTCACGTTGGCGTGCCATCGATGTCGTTGCTCG
ACTGTTTTTCTTGCGGATCAACGGATGCGGCATCCATCTCGTCTCAGTGC
GCGAACTGTCTCGTGGATCAACGGGGCGCCATAAAGCTAGCCGACTTCGG
CATGTCCAAGCGCATCGTGGTGCGTGTCCGTCTGTCTGGGAGAAGGGGGG
CGGTGGGCGGGGAGGGGGTGGATGGGGCGGCGAGAGATAAATATCAGTAC
GATCTTGCACGTGTGCTCCGGCATCTACTGGCGGTAAGATGACGGAGAGA
TATTGGCGGTGGCGGTGCTACCAACGTGCCGAACATTCGACACGGGCTTC
CGCTCCTATCCGTACCCCTACCTAGAGCACGTACGATCATCCCGCTTCCT
TTTCCCCTCTTCTAGCGGACGCCGGTCGACCCCTCTCGGCCGTTCTCAGA
GCGCGCGTTGCCGGGGTCGCAAATAGAAGGCAGATCCTCATCGGGGCCTC
TCTTGCGTGCCCCCGGTGGTTCTTCCCCTCGATTTCCCACGCCGGAAGGA
CTGGGCCGACCATATCGGCGCCACGCCCGATCGTGGGCGAAAGGGTGGAA
AACGGCGTGGAGAGACGCGGGCAACGAACGACGCCGGCTCAAATAGCTGC
CCTACTGCGGGCTCAACCTGCTAGGGGAATGCACGCGCGTCCGGTCCCGT
CTAGGGCCATTTCGTCGAAGGAGTTTATTGGGTTGATGCATTACCGTTGC
GCCGTCGAGTGGAGCCTGAGAACACGATCCAGGACATATGAGCACACCCA
CATCAGCCGAAAGACCAACTGAGACTCCTGAACGTCCCTTCTATTAAAAA
CTAAAAGTGCACGCAACGGGTCTGTTCCCTGCCTATCAACACGCTCGTTT
CCGTCTGCGCGCGTGGGTGGGGGTGGGGGGGCTCCGCAGGGGCTGTCGGG
AACGAGCGGCAGTCCTGGGGTGCAGAGCGTTAAGGGGACCCCGTTCTGGA
TGGCGCCGGAAGTCCTACAGGTGCCGACGCTGCTGAGAACGTTGCCGTTG
CCGTTGCCGTTGTCGTTGCCGTTGCCGTCGCCTTGTTTTTTTTTTACTTG
TGTGGCTGGTTGCTGATGTGTCGTCGATGCGAGTGTTTGCCAGGTCGTGG
CTCGATCGTTGACCCATGGTGCTGCGGCAGCGGCAATAGTTGCCCAGTAT
GGGTGGTGCCCTCGCCATGGTCCAATGGTGAGGCCCCTGTGCGTGGTGTC
GTCACCTAGGTTTCCTCCCCGGTATTTGTCTTCCGGGCTGTCTTTCCTTT
TTGTTGTCTAAGTTGTAATGTGCTTTGGTTAATGTTGTTTTTGCAGGTGC
AGGACTTGAGAGATGGATGGATGAAGGCCGACGTCTGGTCCCTCGGAGCA
ACCATCCTAGAAATGGCATCAGGCAGCCCCCCGTGGGGAACGATAGGGCC
TCTCGCCGCGATGTTCAAGATCAGCTGTACTCGGTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11486:844..3580-

>mRNA_H-canaliculatus_F_contig11486.1311.1 ID=mRNA_H-canaliculatus_F_contig11486.1311.1|Name=mRNA_H-canaliculatus_F_contig11486.1311.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1356bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11486:844..3580- (Hapterophycus canaliculatus Oshoro5f female)
AGGTGGCTCAGAGGTGATGTCATCGGCGAGGGAGCGTTCGGCACGGTGCA
CATGGGCCTCAATCTCGACACCGGGGAGCTGATGGCGGTCAAGAGCATAT
CGTTGGACCAGGGGGACATGACCCCGCGAGACGCCAAGGCTTTCGAGAAC
GAGATTGCCATTCTTAGAGACAATAAAGGTGGCTCAGAGGTGATGTCATC
GGCGAGGGAGCGTTCGGCACGGTGCACATGGGCCTCAATCTCGACACCGG
GGAGCTGATGGCGGTCAAGAGCATATCGTTGGACCAGGGGGACATGACCC
CGCGAGACGCCAAGGCTTTCGAGAACGAGATTGCCATTCTTAGAGACAAT
AAGCACGAAAACATCGTGAGGTCGTTCGGGAGCAGCGTCAAGGGCCAGCA
GATCTGCATATTTCTGGAGTACATGCCCGGGGGCTCCGTGCGTCACCTCC
TTGACCGCTTCGGCGCTCTGGAGGAGACGATGACTCTCCTGTACGCGAAG
CAGCTCCTAAGGGGGCTGAGCTTCCTGCACAAGAACGGGGTGGCGCATCG
CGATATCAAGGCACGAAAACATCGTGAGGTCGTTCGGGAGCAGCGTCAAG
GGCCAGCAGATCTGCATATTTCTGGAGTACATGCCCGGGGGCTCCGTGCG
TCACCTCCTTGACCGCTTCGGCGCTCTGGAGGAGACGATGACTCTCCTGT
ACGCGAAGCAGCTCCTAAGGGGGCTGAGCTTCCTGCACAAGAACGGGGTG
GCGCATCGCGATATCAAGTGCGCGAACTGTCTCGTGGATCAACGGGGCGC
CATAAAGCTAGCCGACTTCGGCATGTCCAAGCGCATCGTGTGCGCGAACT
GTCTCGTGGATCAACGGGGCGCCATAAAGCTAGCCGACTTCGGCATGTCC
AAGCGCATCGTGGGGCTGTCGGGAACGAGCGGCAGTCCTGGGGTGCAGAG
CGTTAAGGGGACCCCGTTCTGGATGGCGCCGGAAGTCCTACAGGGGCTGT
CGGGAACGAGCGGCAGTCCTGGGGTGCAGAGCGTTAAGGGGACCCCGTTC
TGGATGGCGCCGGAAGTCCTACAGGTGCAGGACTTGAGAGATGGATGGAT
GAAGGCCGACGTCTGGTCCCTCGGAGCAACCATCCTAGAAATGGCATCAG
GCAGCCCCCCGTGGGGAACGATAGGGCCTCTCGCCGCGATGTTCAAGATC
AGCTGTACTCGGTAGGTGCAGGACTTGAGAGATGGATGGATGAAGGCCGA
CGTCTGGTCCCTCGGAGCAACCATCCTAGAAATGGCATCAGGCAGCCCCC
CGTGGGGAACGATAGGGCCTCTCGCCGCGATGTTCAAGATCAGCTGTACT
CGGTAG
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