mRNA_H-canaliculatus_F_contig1141.1246.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1141.1246.1 vs. uniprot
Match: D7FYY1_ECTSI (Protein serine/threonine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY1_ECTSI) HSP 1 Score: 381 bits (979), Expect = 7.670e-120 Identity = 281/629 (44.67%), Postives = 348/629 (55.33%), Query Frame = 1
Query: 1 GGQRPTAIGMAEVT------MWPPALSLGPSSAPALPPAAA--HRPATTTLDIRPCASPPSPGWHPPAAVLRERHMTRKGSTSPRTRGGRPISPRQVPVSPPCSPSSPRSSKSVSTSTRGASXXXXXXXXXXXXXXSTAGAPRSEQESGLLKVSSSVYSGRFTYLDVSTTPPLTPASALSSPASTTSGASGSNSSRDFFGVSYGLSRPLLPPPQDDIVRFQQHDGGTRRSLQEQRNLQGILGPRTTTPEKDIHVRPDRERGW---EAVAVAPRSEGSGQARTS--GVVDPGTGVFDAIVKGVKPGQLRRLLIRSLRQSRWGGLGDTCAQVRMATMSLVGSEESNSVKGALEEVEILGSGSFGVVAAVRHNTLGHKFALKKLKEGAGEVGRYCAKAEMLAMARLAAASPHSNVVSAVCIDDREEAVDTMPILFPRADMDFGQVLWHGGWNMPAKLRCLEQIASGVRHVHEQGIGHGDIKPENMLLFDDGHGGCDPKLCDFGMSRALGELRPSMMGTPGYMPLEIMLASVATHQSQDTFAMAAVALVVCVALEKAQSNIFTSPILYTEEEAREIKALEAWGEEDPLVEARRQIFQERMMKRTMRDGSIAKLMTADNLHPDLGSSDAMDMVS 1848
GG RP AI +AE T + ALSL SS P P AA + TTT P PSP P AA R R STSPR RGGRP SPR+ P + SPS R T+ R A+ S G S + + SG LDVS TPPLTPAS + SPA+ S SN+ FFG SYG DD V Q R S +QR +Q + G T + E G +A A A EGS + +D +G +IVKG + G++R I ++RQ + +G+ CA V+ A ++L GS +L E ++G GSFG+V H+ L +FA+KKLKEGA RYCA+ EM+ MARLA SPH NV+ A+ IDDRE AV MPIL PRA DFGQVL G W+M KL CL+Q+ASGVRH+HE GIGHGD+ P N+LL DDG G C PK+ DFG++RALGE+RP MMGT G MPLE+M A V T +SQDTFAM +A VCV +K Q+N+F SP L+T EA+ KALEA G P A R +F+ MM+RTM + L+T DNLHPDLGS+ MVS
Sbjct: 73 GGARP-AIMIAEATETLAAAVPATALSLT-SSTPTRPVAAVCKAKDITTTDVTPPLLLLPSPEAKPTAAPSRGR------STSPRVRGGRPPSPRRSPRALSRSPSPQR----PGTAVRAAAMYASSWSAAARPAVSRVGGDFSSAAAAKGVKAPKQGSGHADTLDVSDTPPLTPASPVPSPAAAISEVWSSNTV-SFFGTSYGRD--------DDGVDLSQKRDENRASPIKQRKIQPVRGSGVATSLNQTKLVVPVEAGKRTEKATAAASVEEGSDDCDKTKRARIDVLSGDIRSIVKGSERGEIRAAFIGNVRQRQAATVGEGCALVQAARVALGGSGGGIGASSSLHESGVIGEGSFGIVEGATHSFLPGEFAVKKLKEGADNNARYCARVEMIVMARLAK-SPHPNVIGAIAIDDREAAVG-MPILLPRAHGDFGQVLNDGDWSMTQKLSCLQQVASGVRHMHEAGIGHGDLTPPNILLVDDGDGECVPKISDFGLARALGEMRPKMMGTLGSMPLEVMQAPVRTSESQDTFAMGVMAFTVCVTPDKVQANMFISPDLFTVAEAKAKKALEAKGT-GPFAMAERDLFERNMMERTMSTRAFESLLTVDNLHPDLGSARVRGMVS 677
BLAST of mRNA_H-canaliculatus_F_contig1141.1246.1 vs. uniprot
Match: A0A6H5L7R5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7R5_9PHAE) HSP 1 Score: 263 bits (672), Expect = 3.450e-74 Identity = 202/510 (39.61%), Postives = 253/510 (49.61%), Query Frame = 1
Query: 220 TSPRTRGGRPISP-RQVPVSPPCSPSSPRSSKSVSTSTRGASXXXXXXXXXXXXXXSTAGAPRSEQESGLLKVSSSVYSGRFT-YLDVSTTPPLTPASALSSPASTTSGASGSNSSRDFFGVSYGLSRPLLPPPQDDIVRFQQHDGGTRRSLQEQRNLQGILGPRTTTPEKDIHVRPDRERGWEAVAVAPRSEGSGQARTSGVVDPGTGVFDAIVKGVKPGQLRRLLIRSLRQSRWGGLGDTCAQVRMATMSLVGSEESNSVKGALEEVEILGSGSFGVVAAVRHNTLGHKFALKKLKEGAGEVGRYCAKAEMLAMARLAAASPHSNVVSAVCIDDREEAVDTMPILFPRADMDFGQVLWHGGWNMPAKLRCLEQIASGVRHVHEQGIGHGDIKPENMLLFDDGHGGCDPKLCDFGMSR--------------------------------ALGELRPSMMGTPGYMPLEIMLASVATHQSQDTFAMAAVALVVCVALEKAQSNIFTSPI 1647
TSPR RGGRP SP R P S S RS + T+ R A+ S+ G S S +KV+ S R+ LD + PLTP SA+ SPAS S AS + S +FG YGL DD HD D+ D E S + VD G G F +V +PG++R ++++ + + + CA VR A ++L GSE L ILG GSFGVV + L +FALK+LKE A + RYCA+ EM+ M+RL +PH N+V AV IDDR AVD MPIL PRA+ DF QVL H GW MPAKL CL+Q+A GVRH+H+ GIGHGD+KP N+LLFD G G PK+ DFG +R ALGE+RP MMGT G MPLE+M ASV T+ QDTFAM +A VCV K Q+N+F SP+
Sbjct: 359 TSPRARGGRPPSPCRSTP-----SLSRSRSPQRAGTAVRAAAMNASYWPAAPRPAASSLGGDFSSAAS--VKVNISKQGSRYVGTLDALGSHPLTPVSAVPSPASAISAASNNLS---YFGRRYGL---------DD------HD-------------------------VDLSENGD--------------EDSLSLNRASSVDVGFGNFHPVVDSAEPGEVRTAFVQNVIDRQASTVEEDCALVRAARVALGGSEGGGGANSPLRVGGILGEGSFGVVEGASLSFLPGEFALKRLKEDADDKARYCARVEMIVMSRLVN-NPHPNIVGAVAIDDRAAAVD-MPILLPRANGDFEQVLKHDGWTMPAKLSCLQQVAYGVRHMHKAGIGHGDLKPANILLFDGGGGRFLPKISDFGFARGIGTNLPKPGHXNLTTRRDKSTPRPCPNNTDSALGEMRPKMMGTIGSMPLEVMQASVPTYPRQDTFAMGVMAFTVCVTPNKMQANMFISPV 802
BLAST of mRNA_H-canaliculatus_F_contig1141.1246.1 vs. uniprot
Match: A0A6H5JF73_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF73_9PHAE) HSP 1 Score: 248 bits (632), Expect = 3.950e-67 Identity = 135/240 (56.25%), Postives = 164/240 (68.33%), Query Frame = 1
Query: 1129 RYCAKAEMLAMARLAAASPHSNVVSAVCIDDREEAVDTMPILFPRADMDFGQVLWHGGWNMPAKLRCLEQIASGVRHVHEQGIGHGDIKPENMLLFDDGHGGCDPKLCDFGMSRALGELRPSMMGTPGYMPLEIMLASVATHQSQDTFAMAAVALVVCVALEKAQSNIFTSPILYTEEEAREIKALEAWGEEDPLVEARRQIFQERMMKRTMRDGSIAKLMTADNLHPDLGSSDAMDMVS 1848
R CA + RLA SPH NV+ A+ IDDRE AV MPIL PRA DFGQVL G W+M KL CL+Q+ SGVRH+H+ GIGHGD+ N+LL DDG G C PK+ DFG++RALGE+RP MMGT G MPLE+M ASV T +SQD FAM +A VCV EK Q+N+F SP L+T EA+ KALEA G P A R +F+ ++M+RTM + L+T DNLHPDLGS+ MVS
Sbjct: 882 RVCAARCCVVPPRLAE-SPHPNVIGAIAIDDREAAVG-MPILLPRAHGDFGQVLNDGDWSMTQKLSCLQQVTSGVRHMHQAGIGHGDLTSPNILLVDDGDGECVPKISDFGLARALGEMRPKMMGTLGSMPLEVMQASVRTSESQDAFAMGVMAFTVCVTPEKVQANMFISPYLFTAAEAKAKKALEAKGT-GPFAMAERDLFERKVMERTMSTRAFEALLTVDNLHPDLGSARVRGMVS 1118
BLAST of mRNA_H-canaliculatus_F_contig1141.1246.1 vs. uniprot
Match: D7FYH0_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH0_ECTSI) HSP 1 Score: 176 bits (446), Expect = 8.610e-48 Identity = 92/163 (56.44%), Postives = 116/163 (71.17%), Query Frame = 1
Query: 1360 VHEQGIGHGDIKPENMLLFDDGHGGCDPKLCDFGMSRALGELRPSMMGTPGYMPLEIMLASVATHQSQDTFAMAAVALVVCVALEKAQSNIFTSPILYTEEEAREIKALEAWGEEDPLVEARRQIFQERMMKRTMRDGSIAKLMTADNLHPDLGSSDAMDMVS 1848
+H+ GIGH D+ P N+LL DDG+GGC P++ DFG++RALGE+RP MMGT G MPLE+M ASV SQDTFAM A+A ++CV +K Q+N+F SP L+T EA+ KALEA G PL R IF+ +M+RTM G+ LMT DNLHPDLG + DMVS
Sbjct: 1 MHKAGIGHWDLTPPNILLVDDGYGGCIPQVSDFGLARALGEMRPKMMGTLGSMPLEVMQASVPACPSQDTFAMGAMAFIICVTPDKVQANMFISPHLFTAAEAKAKKALEAKGG-GPLAMTLRDIFERNVMERTMSTGAFTTLMTVDNLHPDLGPTSVRDMVS 162
BLAST of mRNA_H-canaliculatus_F_contig1141.1246.1 vs. uniprot
Match: D7FYH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH1_ECTSI) HSP 1 Score: 125 bits (315), Expect = 2.770e-27 Identity = 97/251 (38.65%), Postives = 128/251 (51.00%), Query Frame = 1
Query: 469 LDVSTTPPLTPASALSSPASTTSGASGSNSSRDFFGVSYG-------LSR------PLLPPPQDDIVRFQQHDGGTRRSLQEQRNLQGILGPRTTTPEKD--IHVRPDRERGWEAVAVAP---RSEGSGQARTSGVVDPGTGVFDAIVKGVKPGQLRRLLIRSLRQSRWGGLGDTCAQVRMATMSLVGSEESNSVKGALEEVEILGSGSFGVVAAVRHNTLGHKFALKKLKEGAGEVGRYCAKAEMLAMAR 1167
LD S TPPLTPAS + SPA S S S+ + FFG YG LS P LPP +D+ +H + + G TP K + V D E A AP RS G G + + D G G F IVKG +PG LR I ++RQ R +G+ CA V+ A ++L GSE + L+E+ I+G GSFG+V H+ L +FA+K+LKEGA + RYCA+ EM+ MAR
Sbjct: 225 LDASGTPPLTPASPVPSPAVAISAGS-SSFNAPFFGSRYGRDDHDGDLSEKGDEVGPSLPPARDNGASPAEHG-----------EVPPVRGSGAGTPLKQAKLVVPVDEGERTETAAAAPVVARSSGDGDNKRPRI-DVGHGDFGRIVKGAQPGVLRTAFITNVRQRREVAVGEACALVQAARVALGGSEGCAGARSPLQEIGIIGEGSFGIVGGATHSFLPGEFAVKRLKEGADKNARYCARVEMIVMAR 462
BLAST of mRNA_H-canaliculatus_F_contig1141.1246.1 vs. uniprot
Match: A0A6H5JF80_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF80_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.690e-17 Identity = 69/231 (29.87%), Postives = 97/231 (41.99%), Query Frame = 1
Query: 1174 AASPHSNVVSAVCIDDREEAVDTMPILFPRADMDFGQVLWHGGWNMPAKLR--------CLEQIASGVRHVHEQGIGHGDIKPENMLLFDDGHGGCDPKLCDFGMSRALGELRPSMMGTPGYMPLEIMLASVATHQSQDTFAMAAVALVVCVALEKAQSNIFTSPILYTEEEAREIKALEAWGEEDPLVEARRQIFQERMMKRTMRDGSIAKLMTADNLHPDLGSSDAMDM 1842
A +PH N++ AV + + + RA DFGQ+L G W + KLR + +ASG+RH+H+ G GHGD+ P N+LL DDG GGC P++ DFG++RA EA+ K L+A G PL + F+ +M+RTM G L+T DN HPDLG + D+
Sbjct: 46 AKNPHPNIIGAV------QPLSVCLSFYSRAHGDFGQMLNDGDWVIAGKLRGRFAAYCSVADIVASGMRHIHKAGTGHGDLTPPNILLVDDGCGGCVPQVSDFGLARA---------------------------------------------------------------EAKAKKTLQANGG-GPLAMTQINTFERNLMERTMATGVFTTLITVDNSHPDLGPTSVRDL 206
BLAST of mRNA_H-canaliculatus_F_contig1141.1246.1 vs. uniprot
Match: D7FWL9_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWL9_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 5.390e-17 Identity = 78/237 (32.91%), Postives = 119/237 (50.21%), Query Frame = 1
Query: 1018 VEILGSGSFGVVAAVRHNTLGHKFALKKLKEGAGEVG------RYCAKAEMLA-MARLAAASPHSNVVSAVCIDDREEAVDTMPILFPRADMDF-----GQVLWHGGWNMPAKLRCLEQIASGVRHVHEQGIGHGDIKPENMLLFDDGHGGCDPKLCDFGMSRALGELRPSMMGTPGYMPLEIMLASVATHQSQDTFAMAAVALVVCVALEKAQSNIFTSPILYTEEEAREIKALEA 1692
V+ LG G+FG+V + TLG +A K+ K+ GE G R CA+A +L M + PH+N+ +DDR++ D++ + + A DF GQVL G +R L +A G+ H+ G+ H D+KP NML+F D G K+ D G + A G++R G +P +M VA SQD FA+A + L+ E SN++ S + T+ + +EA
Sbjct: 446 VKELGQGTFGIVTRLDVLTLGKSYAAKEFKDQ-GEGGDNGSWMRGCAQAGLLTEMIVHNSMPPHANIAGPSAMDDRDK--DSLVVFYDLAVDDFHGYATGQVLASPG----VLMRLLSDMARGLEHLGRHGVSHNDVKPGNMLVFQDS-GVLVAKVTDLGCALAHGDMRRGQGTIGGQVPEGMMSREVACEPSQDVFALAHMVLLTLTKDEWKSSNMWFSQAVQTDGDKEIASTMEA 674
BLAST of mRNA_H-canaliculatus_F_contig1141.1246.1 vs. uniprot
Match: D7FWK7_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK7_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 5.400e-17 Identity = 78/236 (33.05%), Postives = 119/236 (50.42%), Query Frame = 1
Query: 1018 VEILGSGSFGVVAAVRHNTLGHKFALKKLKEGAGEVG------RYCAKAEMLA-MARLAAASPHSNVVSAVCIDDREEAVDTMPILFPRADMDF-----GQVLWHGGWNMPAKLRCLEQIASGVRHVHEQGIGHGDIKPENMLLFDDGHGGCDPKLCDFGMSRALGELRPSMMGTPGYMPLEIMLASVATHQSQDTFAMAAVALVVCVALEKAQSNIFTSPILYTEEEAREIKALE 1689
V+ LG G+FG+V + TLG +A K+ K+ GE G R CA+A +L M + PH+N+ +DDR++ D++ + + A DF GQVL G +R L +A G+ H+ G+ H D+KP NML+F D G K+ D G + A G++R G +P +M VA SQD FA+A + L+ E SN++ S + T+ + I +E
Sbjct: 441 VKELGQGTFGIVTRLDVLTLGKSYAAKEFKDQ-GEGGDNGSWMRGCAQAGLLTEMIVHNSMPPHANIAGPSAMDDRDK--DSLIVFYDLAVDDFHGYATGQVLASPG----VLMRLLSDMARGLEHLGRHGVSHNDVKPGNMLVFQDS-GVLVAKVTDLGCALAHGDMRRGQGTIGGQVPEGMMSREVACEPSQDVFALAHMVLLTLTKNEWKSSNMWFSQAVQTDGDKEIISKME 668
BLAST of mRNA_H-canaliculatus_F_contig1141.1246.1 vs. uniprot
Match: W5W9C4_9PSEU (Non-specific serine/threonine protein kinase n=2 Tax=Kutzneria TaxID=43356 RepID=W5W9C4_9PSEU) HSP 1 Score: 77.8 bits (190), Expect = 1.800e-11 Identity = 59/197 (29.95%), Postives = 94/197 (47.72%), Query Frame = 1
Query: 955 MATMSLVGSEESNSVKGALEEVEILGSGSFGVVAAVRHNTLGHKFALKKLKEGAGEVGRYCAKAEMLAMARLAAASPHSNVVSAVCIDDREEAVDTMPILFPRADMDFGQVLWHGGWNMPAKLRCL-EQIASGVRHVHEQGIGHGDIKPENMLLFDDGHGGCDPKLCDFGMSRALGELRPS----MMGTPGYMPLEI 1530
MA + V SE + G E+LGSG+ GVV R L A+K L EG+ A A + ARL A H +V++ + + + P + +V+ G P + + Q+A+G+ HE G+ H D+KP+N+LL +DG K+ DFG++R G+ + ++GTP Y+ E+
Sbjct: 1 MACVCTVVSECGELIGGRYRLTEVLGSGAMGVVWRARDERLNRVVAIKLLTEGSSPEASREASARAVREARLTARLRHPHVIAVHDVTEHGGRPCLVMEYLPARSLS--EVVEAEGVLSPRRAAAIGAQVAAGLAAAHEAGVLHRDVKPDNVLLTEDG----TAKIADFGIARVPGDSSVTAVGILVGTPAYLAPEV 191
BLAST of mRNA_H-canaliculatus_F_contig1141.1246.1 vs. uniprot
Match: A0A1E8CVB6_9MICO (Non-specific serine/threonine protein kinase n=2 Tax=Humibacillus sp. DSM 29435 TaxID=1869167 RepID=A0A1E8CVB6_9MICO) HSP 1 Score: 76.3 bits (186), Expect = 6.860e-11 Identity = 64/214 (29.91%), Postives = 103/214 (48.13%), Query Frame = 1
Query: 988 SNSVKGALEEVEILGSGSFGVVAAVRHNTLGHKFALKKLKEG-AGEVGRYCAKAEMLAMARLAAASPHSNVVSAVCIDDREEAVDTMPILFPRADMDFGQVLWHGGWNMPAKLRCLEQIASGVRHVHEQGIGHGDIKPENMLLFDDGHGGCDPKLCDFGMSRALGELRPS----MMGTPGYMPLEIMLASVATHQSQDTFAMAAVALVVCVALE 1614
S+ V G V+ + SG G V + G A K +++ AGE+ R+ A+ + + + ASP++ + E VD + D +G + P + LEQ+ S + +HE G+ H D+KP N+LL G G L DFG++ E R + ++GTPGY+P E+ML + H S D +A+ +AL + + LE
Sbjct: 12 SDIVAGRYALVDPIASGGTGTVWRAYDHERGQWCAAKVMRQRHAGELLRF-AREQSVRLQHPHIASPYAWAADDGTVLIASELVDGGSLHTLIGD--------YGPLDEPTVVVLLEQVLSALAAMHEAGLVHRDVKPGNILLRATGEGPVHCMLTDFGLTIGADEPRLTQTGMVIGTPGYLPPEVMLGTARPHPSHDVYAVGRLALTMALGLE 216 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1141.1246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1141.1246.1 >prot_H-canaliculatus_F_contig1141.1246.1 ID=prot_H-canaliculatus_F_contig1141.1246.1|Name=mRNA_H-canaliculatus_F_contig1141.1246.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=607bp MAEVTMWPPALSLGPSSAPALPPAAAHRPATTTLDIRPCASPPSPGWHPPback to top mRNA from alignment at H-canaliculatus_F_contig1141:4502..10662- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1141.1246.1 ID=mRNA_H-canaliculatus_F_contig1141.1246.1|Name=mRNA_H-canaliculatus_F_contig1141.1246.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6161bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1141:4502..10662- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1141:4502..10662- >mRNA_H-canaliculatus_F_contig1141.1246.1 ID=mRNA_H-canaliculatus_F_contig1141.1246.1|Name=mRNA_H-canaliculatus_F_contig1141.1246.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3642bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1141:4502..10662- (Hapterophycus canaliculatus Oshoro5f female)back to top |