mRNA_H-canaliculatus_F_contig11372.1223.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11372.1223.1
Unique NamemRNA_H-canaliculatus_F_contig11372.1223.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11372.1223.1 vs. uniprot
Match: D7FX43_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX43_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 8.640e-108
Identity = 174/233 (74.68%), Postives = 180/233 (77.25%), Query Frame = 1 
Query:    4 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGK-------------------------------------------DANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREVGTEELSRIFDRRRQQQ-EEGLDQMEGRNDPLYPYVCPNCKAGFNAAKALDFHQKEVHK 570
            VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGK                                           DANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQK AVICACIIAAYREVGTEEL+R+FD RRQQQ ++GL+Q     DPLYPYVC  CKAGFNAAKALDFHQ+EVHK
Sbjct:  140 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARLSRSRYFLMRCAFFRQAGWLPLCRPAVLGGGGVAPFSWRGHDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEELTRMFDLRRQQQLQQGLEQ-----DPLYPYVCSECKAGFNAAKALDFHQREVHK 367
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BLAST of mRNA_H-canaliculatus_F_contig11372.1223.1 vs. uniprot
Match: A0A835ZF02_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF02_9STRA)

HSP 1 Score: 196 bits (499), Expect = 9.610e-57
Identity = 96/146 (65.75%), Postives = 118/146 (80.82%), Query Frame = 1 
Query:    4 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGK-DANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREVGTEELSRIFDRRR 438
             HEG+MYR+FEGE DRSHHG  P++LYSTA+NMRT IS+G  D+ RL NL+  VEM LS +GKD+++TR  YKD+MK++AFD+I+H+A NCDLH TVT RAKELFAGWRNVKEHVH K+AVICACI+AAYR +  +E      RRR
Sbjct:   90 AHEGNMYRQFEGEVDRSHHGLPPDKLYSTAYNMRTQISKGALDSARLANLSSYVEMNLSQMGKDDKRTRVGYKDQMKKQAFDVIDHMAANCDLHGTVTERAKELFAGWRNVKEHVHHKNAVICACIVAAYRTIAADEYRAREARRR 235
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BLAST of mRNA_H-canaliculatus_F_contig11372.1223.1 vs. uniprot
Match: A0A3R7GL14_9STRA (C2H2-type domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GL14_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.660e-51
Identity = 98/192 (51.04%), Postives = 125/192 (65.10%), Query Frame = 1 
Query:    4 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREVGTEELSRIFDRRRQQQEEG-------LDQMEGRNDPLYPYVCPNCKAGFNAAKALDFHQ 555
            VHEGS YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ G+ A  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+V+EHVHQ  A++  C+IAAY E G E  S     R  Q ++        L         L+P+ CP C   FNA + + FH+
Sbjct:  171 VHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTMSNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETGKEMYSAQNAIRIGQNKQAGIANLTLLPNKAVDEKKLHPFTCPLCDMKFNARRGMQFHK 362
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BLAST of mRNA_H-canaliculatus_F_contig11372.1223.1 vs. uniprot
Match: W2RG83_PHYPN (C2H2-type domain-containing protein n=38 Tax=Peronosporaceae TaxID=4777 RepID=W2RG83_PHYPN)

HSP 1 Score: 179 bits (454), Expect = 1.870e-50
Identity = 97/192 (50.52%), Postives = 124/192 (64.58%), Query Frame = 1 
Query:    4 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREVGTEELSRIFDRRRQQQEEG-------LDQMEGRNDPLYPYVCPNCKAGFNAAKALDFHQ 555
            VHEGS YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ G+ A  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+V+EHVHQ  A++  C+IAAY E   E  S     R  Q ++        L         L+P+ CP C   FNA + + FH+
Sbjct:  210 VHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKEMYSAQNGIRIGQNKQAGIASLALLPNKAVDEKKLHPFTCPLCDMKFNARRGMQFHK 401
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BLAST of mRNA_H-canaliculatus_F_contig11372.1223.1 vs. uniprot
Match: A0A8K1FG42_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG42_PYTOL)

HSP 1 Score: 178 bits (452), Expect = 2.000e-50
Identity = 98/194 (50.52%), Postives = 128/194 (65.98%), Query Frame = 1 
Query:    4 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREVGTEELS-RIFDRRRQQQEEGLDQME------GRNDPLYPYVCPNCKAGFNAAKALDFHQKE 561
            VHEGS YRKFEGE D+SHHGPAPN+L+S++HN+RT IS+ G+ A  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+++EHVHQ  AV+  C+IAAY E   E  + +   R    ++ GL  +            L+P+ CP C   FNA +AL FH  E
Sbjct:  172 VHEGSAYRKFEGEEDKSHHGPAPNKLFSSSHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKASRLIDHTISNLDLHEIVGNRAKKMFADFRDLREHVHQFEAVVAGCVIAAYMETAKEMYTAQNAIRIGANKQAGLSALPLPPNKAVDEKKLHPFKCPTCDMTFNARRALQFHNCE 365
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BLAST of mRNA_H-canaliculatus_F_contig11372.1223.1 vs. uniprot
Match: K3X3Y0_GLOUD (C2H2-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3Y0_GLOUD)

HSP 1 Score: 177 bits (448), Expect = 9.870e-50
Identity = 94/195 (48.21%), Postives = 127/195 (65.13%), Query Frame = 1 
Query:    4 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREVGTEELSRIFDRRRQQQEEGLDQMEGRNDPL-----------YPYVCPNCKAGFNAAKALDFH 552
            VHEGS YRKFEGE D+SHHGPAPN+L+S+ HN+RT IS+ G+ A  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+V+EHVHQ  A++  C+IA+Y + G E    ++  +   +   L Q    + PL           +P+ CP+C   FNA + + FH
Sbjct:  181 VHEGSAYRKFEGEEDKSHHGPAPNKLFSSGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIASYMDTGKE----MYAAQNMVKTGPLKQTGAASLPLPPNKPVDEKKLHPFTCPDCDMKFNAKRGMQFH 371
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BLAST of mRNA_H-canaliculatus_F_contig11372.1223.1 vs. uniprot
Match: A0A0W8C063_PHYNI (C2H2-type domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C063_PHYNI)

HSP 1 Score: 179 bits (454), Expect = 1.200e-49
Identity = 97/192 (50.52%), Postives = 124/192 (64.58%), Query Frame = 1 
Query:    4 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREVGTEELSRIFDRRRQQQEEG-------LDQMEGRNDPLYPYVCPNCKAGFNAAKALDFHQ 555
            VHEGS YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ G+ A  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+V+EHVHQ  A++  C+IAAY E   E  S     R  Q ++        L         L+P+ CP C   FNA + + FH+
Sbjct:  334 VHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKEMYSAQNGIRIGQNKQAGIASLALLPNKAVDEKKLHPFTCPLCDMKFNARRGMQFHK 525
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11372.1223.1 vs. uniprot
Match: A0A2D4C348_PYTIN (C2H2-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C348_PYTIN)

HSP 1 Score: 175 bits (443), Expect = 5.150e-49
Identity = 96/191 (50.26%), Postives = 125/191 (65.45%), Query Frame = 1 
Query:    4 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREVGTEE-LSRIFDRRRQQQEEGLDQM------EGRNDPLYPYVCPNCKAGFNAAKALDFH 552
            VHEGS YRKFEGE D+SHHGPAPN+L+S+ HN+RT IS+ G+ A  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+V+EHVHQ  A++  C+IAAY +   E  L++   R    +  G   +            L+P+ CP C   FNA +AL FH
Sbjct:  180 VHEGSAYRKFEGEEDKSHHGPAPNKLFSSGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGNRAKKMFAEFRDVREHVHQFEAMVAGCVIAAYMDTAKEMYLAQNAIRTGAVKSTGPASLPLPANKSVDEKKLHPFTCPTCDMKFNARRALQFH 370
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11372.1223.1 vs. uniprot
Match: A0A1V9ZD07_9STRA (C2H2-type domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD07_9STRA)

HSP 1 Score: 172 bits (437), Expect = 2.030e-48
Identity = 93/192 (48.44%), Postives = 128/192 (66.67%), Query Frame = 1 
Query:    4 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREVGTEELS-RIFDRRRQQQEEGLDQMEGRNDP------LYPYVCPNCKAGFNAAKALDFHQ 555
            VHEG+ YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ G+ +  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+++EHVHQ  AV+  CII AY   G E  S +   +   +++ G+ Q++  +        L+P+ C  C   FN+ + L FH+
Sbjct:  139 VHEGNAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKAIRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYLTTGKEMYSAQASIKLGPKRQAGIAQIQLPSHKAIDEKKLHPFSCSKCGEIFNSKRGLQFHK 330
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11372.1223.1 vs. uniprot
Match: A0A024GKS6_9STRA (C2H2-type domain-containing protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GKS6_9STRA)

HSP 1 Score: 172 bits (437), Expect = 2.550e-48
Identity = 93/192 (48.44%), Postives = 125/192 (65.10%), Query Frame = 1 
Query:    4 VHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREVGTEELS-------RIFDRRRQQQEEGLDQMEGRNDPLYPYVCPNCKAGFNAAKALDFHQ 555
            VHEGS YRKFEGE D+SHHGPAPN+L+ST+HN+RT IS+ G+ A  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+V+EHVHQ  A++  C+IAAY   G E  +        +         + +D+ +     L+P+ C  C   FNA + + FH+
Sbjct:  164 VHEGSAYRKFEGEEDKSHHGPAPNKLFSTSHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTVSNLDLHEIVGNRAKKMFAEFRDVREHVHQFEAMVAGCVIAAYIATGREMYTAQHGLCVEVDPFGNSVPSKPIDETK-----LHPFTCTLCDMKFNARRGMQFHK 350
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11372.1223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX43_ECTSI8.640e-10874.68C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A835ZF02_9STRA9.610e-5765.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3R7GL14_9STRA1.660e-5151.04C2H2-type domain-containing protein n=4 Tax=Phytop... [more]
W2RG83_PHYPN1.870e-5050.52C2H2-type domain-containing protein n=38 Tax=Peron... [more]
A0A8K1FG42_PYTOL2.000e-5050.52Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3X3Y0_GLOUD9.870e-5048.21C2H2-type domain-containing protein n=1 Tax=Globis... [more]
A0A0W8C063_PHYNI1.200e-4950.52C2H2-type domain-containing protein n=10 Tax=Phyto... [more]
A0A2D4C348_PYTIN5.150e-4950.26C2H2-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A1V9ZD07_9STRA2.030e-4848.44C2H2-type domain-containing protein n=1 Tax=Thraus... [more]
A0A024GKS6_9STRA2.550e-4848.44C2H2-type domain-containing protein n=3 Tax=Albugo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11372contigH-canaliculatus_F_contig11372:616..4048 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score324.3
Seed ortholog evalue3.6e-86
Seed eggNOG ortholog2880.D7FX43
EggNOG OGs29I43@1,2RRAZ@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionC2H2 zinc finger protein
Ec32 orthologEc-10_004250.1
Exons5
Model size570
Cds size552
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11372.1223.1prot_H-canaliculatus_F_contig11372.1223.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11372 634..4048 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928821.4474294-UTR-H-canaliculatus_F_contig11372:615..6331622928821.4474294-UTR-H-canaliculatus_F_contig11372:615..633Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11372 616..633 +
1696845577.6245573-UTR-H-canaliculatus_F_contig11372:615..6331696845577.6245573-UTR-H-canaliculatus_F_contig11372:615..633Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig11372 616..633 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928821.4623134-CDS-H-canaliculatus_F_contig11372:633..7411622928821.4623134-CDS-H-canaliculatus_F_contig11372:633..741Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11372 634..741 +
1696845577.639269-CDS-H-canaliculatus_F_contig11372:633..7411696845577.639269-CDS-H-canaliculatus_F_contig11372:633..741Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11372 634..741 +
1622928821.4734251-CDS-H-canaliculatus_F_contig11372:1209..12721622928821.4734251-CDS-H-canaliculatus_F_contig11372:1209..1272Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11372 1210..1272 +
1696845577.6509798-CDS-H-canaliculatus_F_contig11372:1209..12721696845577.6509798-CDS-H-canaliculatus_F_contig11372:1209..1272Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11372 1210..1272 +
1622928821.4885387-CDS-H-canaliculatus_F_contig11372:2267..24131622928821.4885387-CDS-H-canaliculatus_F_contig11372:2267..2413Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11372 2268..2413 +
1696845577.663043-CDS-H-canaliculatus_F_contig11372:2267..24131696845577.663043-CDS-H-canaliculatus_F_contig11372:2267..2413Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11372 2268..2413 +
1622928821.504954-CDS-H-canaliculatus_F_contig11372:3133..32781622928821.504954-CDS-H-canaliculatus_F_contig11372:3133..3278Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11372 3134..3278 +
1696845577.6754665-CDS-H-canaliculatus_F_contig11372:3133..32781696845577.6754665-CDS-H-canaliculatus_F_contig11372:3133..3278Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11372 3134..3278 +
1622928821.524029-CDS-H-canaliculatus_F_contig11372:3958..40481622928821.524029-CDS-H-canaliculatus_F_contig11372:3958..4048Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11372 3959..4048 +
1696845577.68642-CDS-H-canaliculatus_F_contig11372:3958..40481696845577.68642-CDS-H-canaliculatus_F_contig11372:3958..4048Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11372 3959..4048 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11372.1223.1

>prot_H-canaliculatus_F_contig11372.1223.1 ID=prot_H-canaliculatus_F_contig11372.1223.1|Name=mRNA_H-canaliculatus_F_contig11372.1223.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=184bp
MYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKDANRLRNLAEDVEM
GLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFA
GWRNVKEHVHQKHAVICACIIAAYREVGTEELSRIFDRRRQQQEEGLDQM
EGRNDPLYPYVCPNCKAGFNAAKALDFHQKEVHK
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mRNA from alignment at H-canaliculatus_F_contig11372:616..4048+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11372.1223.1 ID=mRNA_H-canaliculatus_F_contig11372.1223.1|Name=mRNA_H-canaliculatus_F_contig11372.1223.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3433bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11372:616..4048+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGTCCACGAGGGCAGCATGTACCGCAAGTTCGAGGGCGAAGCGGACAG
GAGTCACCACGGGCCGGCGCCGAACCGGCTGTACTCGACCGCGCACAACA
TGCGCACGTGGATCAGCGAAGGGAAGGTGAGCGGCCACGGTCGCCGTCGT
CGTCCTCGTCCTGGTCGTCGTCGACGACGTTGTTGTTGTTGTCGTCGTTT
TTGGATCCCGCTCGCCCCTGTGTGGCTCGGTTCCGCGTGTCTTGGGCTTG
CTCGTCTTTGGTTTTCCTTCTGCTTTCTCCTGGCTCTCACAGGGTGCTGG
ATCTTCCTTTCAATGCGTTTATTGTTCCTTTTCAATGCCGGTGGCAATAT
GCTCGGACCCTAGTGCCGTCTCTGCCGCTGCCGCTGCTGTCTCTGCTGTC
TCGGGGGACTGTTTCATCTAGTAGGAAGACCTCGCTGTTTCTGACCACTG
GGTACGTGGTTTCATGCACGGGAGTGGTTTCGTTCGTGTGGTGGGAACAA
GCTCACTCGATCGGTGATCGTGCTGATACGACGGAGCGCGCGTTTTGCGC
GATCCGTTCCTGTTCCTTTTCGTCCGGGCGCTCGCGGAGACCAGGACGCG
AATCGTCTGCGGAATCTCGCGGAGGACGTCGAGATGGGCCTCAGCACCGT
GGGCAAGGTGCGACCACCGTTCGAAACAACGGCATCAACGACATGATCGC
ACAAAACCAGGCGCAGATCCGCACAGCCTCGCCACCGCTATTTTGTAAGT
CTGGGCTCTGCTGCGTTCGTAGGAGGGGGGCACGCGGTGCGATGTGAGCG
GGGGAAAGAGGTAATGGTGGGCGTCGATCGCTCGGGCGGAGGCAAGAGAA
GTGTGTGGTACACCTCAAGGGACGGGGGACGCACCAAGTGGTCGGGTGGA
TTCCGAGGAACTGTAAGTGCTTCAGATTGCCCTGCGGAACGACTTCCTTG
GACTCTTACCAGCTTCGAGTACAAGATGCACCAGGTAGGATGCGCTCGAG
CTGGTATTGAGCGCGTTGGTGGCTGACGGCAGGGAGGAAGGCTTTGCCAG
ATGGCCGGCTGGCTTTCCCTCCGCCTCGGTGCTATGATATTGTCCCGGTT
CCAGGACCTCGGTTGGGAGTGGAAGGTAGCGCCGATGCGAAAAAATCCAC
CGCGACGTAAAGGATGTGACACGGAATCTGTCTGAGAGGGGCGGGGGGTC
CGTGATCGCAAGCAGCACGGGCGAGAGGCGTGTCGTTCACCGTCGTTCGC
GAGATGATGCGGCGTCGGGCGTAGGAGTTGCGAGAAGCTAGGGAAGCTAG
GGAAACTAGGGACGGACGAGGGATAGCCAGCCTCGCGCGCAGCGTTTCCC
TGTGCGTCGTGAGCAGACCCGAATCCCCCCTACCCCCCCCTGCGCCTTTC
TGTCGTACGTCCTGCGGGACACACGCACACACACACACACACGCACACAC
ACACACACACAAATAGACACACACACACACACACACACACACACACACAC
CGGTGCTTGCACAATCCGTACGATACCTCTCGGCGAGCCCCTCCTCGCCC
GATGTTCGTGGTTGCTTGCCGCCGTTTTAAGGGGGGGGGGGGGCGAAACG
TTTTATGACGTGCACCGCGAAAATCTAATGGGTTGGCAACACGCTTCGAC
AGGACGAGCGCAAGACTCGGACGGCGTACAAGGACAAGATGAAGAGGGAG
GCGTTCGACCTGATCAACCACATCGCTGGCAACTGCGACCTTCACGAGAC
GGTCACCGTGAGGGCGAAGGAGCTCTTCGCGGGGTGGCGTAATGTCAAGT
GAGTCCGGAGGCGGTGGCAACGGCGGCGGCGACGGCGGTGGCGACAGATT
CCCACCACCCCATGCTTGTGCCAGCGGGAGGTGCGGGAGCCTTTGGGAGA
GGGGAGGACGGGCGGGGAAGGCTGCCGCCGTGCTTGAAAGAGAGGACGAG
GATAAGGAGAGAGGGACACAGACAGACAGACAGACAGGCAGGCAGACAGG
CAGACAGACAGACAGGCACACAGAGATAGGTTGGGCGTGCGACAGAGGTG
GTTTCCCCAGCTTCAGTACCGGAGGCGTTTTCACGAGGGGCAAGAGTGTG
TGAGACTCTCTGCAAGTCGCGTGTGGTATGCTTCGGGCGGTAGAGGGGGA
AATTCGGGCGGGATGCGGTGGCAAGGTGTAGGCTTGCGGGGCTCCGTACT
TCGCGCGGCTTCTCCGTGTGTTTTACGTACTATGCAAGCCCCGTGAAAGG
GAGTAGCTGAAGACCTGAGCAGAGGTGATAAAAGCGTTGTCGTCGTTGCT
GTTGGAGAGGCCGGGATCGGGAGATGTTTGCCCGCTCGTTGCGAAAGCCG
TGGGCGAGGGGGGACTGCACCTGGGACCCACCCGTATAGTTTGAAGCGCT
GTCTTCGGGGGGGACGTGAGGCGAAGCTTCGCGTGATCGGTTGTCTCGAT
TCCCGGAATCACCCGCCGTCTTCTTCTTTTGTCTTGCTTCCTCTCTCTCC
CTCTCTCTCTTTTGGCAGGGAGCACGTCCACCAGAAGCACGCGGTGATCT
GCGCGTGCATCATCGCGGCCTACCGAGAGGTCGGCACGGAGGAGCTGTCC
AGGATCTTCGACCGGAGACGGCAGCAGCAGGAGGAAGGCTTGGACCAGAT
GGAGGGCCGAAACGTGAGATGAGAGGATCTCGTGACAGAGCAGCTCAGAA
CCGGGGCGGACAAGGCGAATCCGACCGTTGAATTAAAACAAAGCGTTGCA
AGTGCCGGAAACGGTGTTCCCGCAGTGTCATTTCTGCCCGGTGCTCAAAA
TGTCGAAGGAAGAGGAACTCAACGAAGCGCGGGTGAACGCCGTGAGTGAC
TTATGACTCTCCTAAGCAGCGGTAAGATGATCCGGCCCCGCCGCCCTTTG
CGGCCTAAGACTGCCGGCGGGTTCCACACCTCGGACAATGGACGATGGCT
ACAGGGGTGGGGTCTCGAGGAAGCGGCGCTTGGGGCTACAGCGTCTCTTA
AGAGGACTGTGTGTGGGGAGAGCGTGTTCGGACAACCGCTGCGGGGCGCG
TACGGAGCGTATGGACGGATTGCGTGTGCGTATGTATGGCGTGTGGCAGT
GTCGAGGTTCGGACCCGAGCAGACCAACAGGAATGCCCGGCCAGGCGGCG
GGACTCCTGAGGGGAAACCCGGGGACGGCGTAGCGGTGTGTGACGACGGC
ACGCGTGCCACCCCTCCCTCCGTCTCCCCTTGCTGCGATCACGAGGGCGT
TTTCAACCCTCCCTCTCTCCCCTCCGTGTTCTGCCGTATCCCTGCCGTAT
CCCTGCCGTGTCCCTGCCGCGCTGTTGCCTTGTTGGCGATCAGGATCCCC
TGTATCCGTACGTCTGCCCGAACTGCAAGGCGGGCTTCAATGCGGCGAAG
GCGCTTGACTTCCACCAAAAGGAGGTGCACAAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11372:616..4048+

>mRNA_H-canaliculatus_F_contig11372.1223.1 ID=mRNA_H-canaliculatus_F_contig11372.1223.1|Name=mRNA_H-canaliculatus_F_contig11372.1223.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1104bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11372:616..4048+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTACCGCAAGTTCGAGGGCGAAGCGGACAGGAGTCACCACGGGCCGGC
GCCGAACCGGCTGTACTCGACCGCGCACAACATGCGCACGTGGATCAGCG
AAGGGAAGATGTACCGCAAGTTCGAGGGCGAAGCGGACAGGAGTCACCAC
GGGCCGGCGCCGAACCGGCTGTACTCGACCGCGCACAACATGCGCACGTG
GATCAGCGAAGGGAAGGACGCGAATCGTCTGCGGAATCTCGCGGAGGACG
TCGAGATGGGCCTCAGCACCGTGGGCAAGGACGCGAATCGTCTGCGGAAT
CTCGCGGAGGACGTCGAGATGGGCCTCAGCACCGTGGGCAAGGACGAGCG
CAAGACTCGGACGGCGTACAAGGACAAGATGAAGAGGGAGGCGTTCGACC
TGATCAACCACATCGCTGGCAACTGCGACCTTCACGAGACGGTCACCGTG
AGGGCGAAGGAGCTCTTCGCGGGGTGGCGTAATGTCAAGACGAGCGCAAG
ACTCGGACGGCGTACAAGGACAAGATGAAGAGGGAGGCGTTCGACCTGAT
CAACCACATCGCTGGCAACTGCGACCTTCACGAGACGGTCACCGTGAGGG
CGAAGGAGCTCTTCGCGGGGTGGCGTAATGTCAAGGAGCACGTCCACCAG
AAGCACGCGGTGATCTGCGCGTGCATCATCGCGGCCTACCGAGAGGTCGG
CACGGAGGAGCTGTCCAGGATCTTCGACCGGAGACGGCAGCAGCAGGAGG
AAGGCTTGGACCAGATGGAGGGCCGAAACGGAGCACGTCCACCAGAAGCA
CGCGGTGATCTGCGCGTGCATCATCGCGGCCTACCGAGAGGTCGGCACGG
AGGAGCTGTCCAGGATCTTCGACCGGAGACGGCAGCAGCAGGAGGAAGGC
TTGGACCAGATGGAGGGCCGAAACGATCCCCTGTATCCGTACGTCTGCCC
GAACTGCAAGGCGGGCTTCAATGCGGCGAAGGCGCTTGACTTCCACCAAA
AGGAGGTGCACAAGGATCCCCTGTATCCGTACGTCTGCCCGAACTGCAAG
GCGGGCTTCAATGCGGCGAAGGCGCTTGACTTCCACCAAAAGGAGGTGCA
CAAG
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