mRNA_H-canaliculatus_F_contig1137.1219.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1137.1219.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 345 bits (886), Expect = 2.600e-113 Identity = 166/293 (56.66%), Postives = 202/293 (68.94%), Query Frame = 1 Query: 34 VENKPYAYNAGGVKEVQARAKANTDPTELAANGGGDRFPLYFQPRAPNGNYLESNEIAKRHGVCGDPRLGGTK--NTYSTPNSEWEVLDSFVSGQEIEIDVVVVFYHWGHLEFFICDTADLDHPDDVVTQECLNKYPLTRAPDDNAASPIDPEYPGRYYMDPPCRKDETEQNVGVWVPQDPYNVRMRYLLPDITCTHCVLQMHYMSGDRCRHVGVDEFNPPFWNSECAPKKEDWIDLDTGSICGQGGGYPEEFWACSDFAIVSSGSPPVPAPVXXXXXXEPYTAQTLEPTTDG 906 VE P+ YNA G K V+ RA N D L A GGG+ FPLYF A NGNYLE+NEIAKRHGVCGDP + N YST N W+ LDSF SGQ +E+D+V+ YHWGH EFF+C+T D+D PD V TQEC N +PLTRA DD ASPIDP YPGRYY+DP CR++ETEQ+ + YN++MRY+LPDI C HC+LQM Y +G+ C+H+G +EFNP W S CAP K DWI+LD +CG G YPEEFWACSDF++ S GS P AP+ +P + E +TDG Sbjct: 46 VEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGEEFPLYFGEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQSSNSI---EGYNIKMRYVLPDIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDR-YVCGTRGQYPEEFWACSDFSMTSDGSTPADAPMP-----DPVDEEDDEDSTDG 329
BLAST of mRNA_H-canaliculatus_F_contig1137.1219.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI) HSP 1 Score: 309 bits (791), Expect = 1.040e-99 Identity = 151/275 (54.91%), Postives = 183/275 (66.55%), Query Frame = 1 Query: 31 NVENKPYAYNAGGVKEVQARAKANTDPTELAANGGGDRFPLYFQPRAPNGNYLESNEIAKRHGVCGDPRLG--GTKNTYSTPNSEWEVLDSFVSGQEIEIDVVVVFYHWGHLEFFICDTADLDHPDDVVTQECLNKYPLTRAPDDNAASPIDPEYPGRYYMDPPCRKD--ETEQNVGVWVPQDPYNVRMRYLLPDITCTHCVLQMHYMSGDRCRHVGVDEFNPPFWNSECAPKKEDWIDLDTGSICGQGGGYPEEFWACSDFAIVSSGSPPVPAP 843 N + P+ YNA G +AR DP L ++GGG FPL F P APNGNYLE NE+A RHGVCGDP NTYST +S WE L ++ SGQ +E +V+ +HWGHLEFFIC+ AD D PD + TQEC N+YPLTRA D+ SPIDP +PGRYY DP CR E +Q + N++MRY+LPDI C+HC+LQM Y +G+ C H+G +EFNPP W S CAP KEDW+D T CGQGG YPEEFWACSDF+I +PP P P Sbjct: 43 NFDGCPHCYNAHGSAGTKARGIELMDPDVLESHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKPAGSNTYSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFICN-ADND-PDGIPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQTKPLHAISGE-NMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDT-TREACGQGGYYPEEFWACSDFSITRDATPPSPTP 313
BLAST of mRNA_H-canaliculatus_F_contig1137.1219.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 327 bits (838), Expect = 1.730e-98 Identity = 154/275 (56.00%), Postives = 187/275 (68.00%), Query Frame = 1 Query: 25 FDNVENKPYAYNAGGVKEVQARAKANTDPTELAANGGGDRFPLYFQPRAPNGNYLESNEIAKRHGVCGDPRLGGTK--NTYSTPNSEWEVLDSFVSGQEIEIDVVVVFYHWGHLEFFICDTADLDHPDDVVTQECLNKYPLTRAPDDNAASPIDPEYPGRYYMDPPCRKDETEQNVGVWVPQDPYNVRMRYLLPDITCTHCVLQMHYMSGDRCRHVGVDEFNPPFWNSECAPKKEDWIDLDTGSICGQGGGYPEEFWACSDFAIVSSGSPPVPAP 843 F ++ P+ YNA G V+ RAKA TDP L GGGD +PLYF A NGNYLE++EIAKRHG+CGDP + N YST N W+VL SF SG+ +E+D+++ YHWGH EFF+C+ ++D PD V TQEC N+YPLTRA DD ASPIDP YPGRYY+DP CR ETEQ P+ YN++MRY+LPDI C CVLQMH +G DEF+PP W S CAP K DWI+L+ ICG+ G YPEEFWACSD ++ S GS P P P Sbjct: 47 FPGIDYCPHCYNARGPDYVKERAKAKTDPAVLNEYGGGDEYPLYFGDFADNGNYLETDEIAKRHGICGDPEQNADEGSNVYSTANIGWDVLGSFKSGEVLEMDIIMNAYHWGHCEFFLCNADEMDDPDGVPTQECFNRYPLTRAADDGDASPIDPNYPGRYYVDPECRAGETEQGSPEGAPKG-YNIKMRYVLPDIECDRCVLQMH---------IGYDEFDPPSWPSTCAPNKSDWIELNR-YICGEEGAYPEEFWACSDISLTSDGSAPPPTP 310
BLAST of mRNA_H-canaliculatus_F_contig1137.1219.1 vs. uniprot
Match: D7FZQ9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ9_ECTSI) HSP 1 Score: 304 bits (779), Expect = 1.800e-97 Identity = 149/269 (55.39%), Postives = 182/269 (67.66%), Query Frame = 1 Query: 31 NVENKPYAYNAGGVKEVQARAKANTDPTELAANGGGDRFPLYFQPRAPNGNYLESNEIAKRHGVCGDPRLG--GTKNTYSTPNSEWEVLDSFVSGQEIEIDVVVVFYHWGHLEFFICDTADLDHPDDVVTQECLNKYPLTRAPDDNAASPIDPEYPGRYYMDPPCRKDETEQNVGVWVPQ-DPYNVRMRYLLPDITCTHCVLQMHYMSGDRCRHVGVDEFNPPFWNSECAPKKEDWIDLDTGSICGQGGGYPEEFWACSDFAIVSSGSP 828 N + P YNA G +AR DP LA +GGG FPL F PRAPNGNYLE NE+A RHGVCGDP NTYST +S WE L +F SGQ++E +VV+ YHWGHLEFFIC+ AD D P+ + TQEC N+YPLTRA D+ SPIDP++PGRYY DP CR +E E + V N++MRY+LPDI C+HC+LQM Y +G+ C H+G D+F+PP W +CA KE W++ T CGQ G YPEEFWACSDF+I S G P Sbjct: 44 NFDGCPQCYNAHGSNGTKARGNELMDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKPSGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICN-ADND-PNGIPTQECFNEYPLTRAEGDDYNSPIDPDFPGRYYCDPTCRGEEGEVDQTKPVHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCYHIGYDDFDPPSWPGDCATTKEQWVNT-TVEACGQEGYYPEEFWACSDFSITSDGPP 309
BLAST of mRNA_H-canaliculatus_F_contig1137.1219.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 296 bits (758), Expect = 2.280e-95 Identity = 145/289 (50.17%), Postives = 187/289 (64.71%), Query Frame = 1 Query: 1 MRSRTPRRFDNVENKPYAYNAGGVKEVQARAKANTDPTELAANGGGDRFPLYFQ----PRAPNGNYLESNEIAKRHGVCGDPRLGGTK--NTYSTPNSEWEVLDSFVSGQEIEIDVVVVFYHWGHLEFFICDTADLDHPDDVVTQECLNKYPLTRAPDDNAASPIDPEYPGRYYMDPPCRKDETEQNVGVWVPQDPYNVRMRYLLPD-ITCTHCVLQMHYMSGDRCRHVGVDEFNPPFWNSECAPKKEDWIDLDTGSICGQGGGYPEEFWACSDFAIVSSG-SPPVPAP 843 M T R F+ +E P YNA G V+ R NTDP LA G G+ +PL + A NGNYLE +EIAKRHG+CGDP + N YSTPN +W +L+++ GQ +EI + + YHWGH+EFFIC+ +++ PD + QEC N YPLTRA D+ SPIDP YPGRYY+DP CR+ ET+Q QD Y + Y LP+ +TC C+LQM+Y +G+ C+HVG +EF P W S CAP+K DWI+LD +CG+ G YPEEFWAC+DFAI G + P PAP Sbjct: 3 MTLHTCRPFERMEYCPSCYNARGPTYVKERGMVNTDPAVLAEYGDGE-WPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGA-QDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDR-YLCGENGSYPEEFWACADFAITPDGMANPTPAP 288
BLAST of mRNA_H-canaliculatus_F_contig1137.1219.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 295 bits (754), Expect = 1.800e-90 Identity = 153/284 (53.87%), Postives = 179/284 (63.03%), Query Frame = 1 Query: 25 FDNVENKPYAYNAGGVKEVQARAKANTDPTELAANGGGDRFPLYFQ----PRAPNGNYLESNEIAKRHGVCGDPRLGGT-----KNTYSTPNSEWEVLDSFVSGQEIEIDVVVVFYHWGHLEFFICDTADLDHPDDVVTQECLNKYPLTRAPDDNAASPIDPEYPGRYYMDPPCRKDETEQNVGVWVPQDPYNVRMRYLLPD-ITCTHCVLQMHYMSGDRCRHVGVDEFNPPFWNSECAPKKEDWIDLDTGSICGQGG-GYPEEFWACSDFAIVSSGSPPVPAP 843 F +E AYNAGG EVQ RA+ TDP LA G G +PL + APNGNY+E I+ RHGVCGDP+ G +NTYSTPN +W VL F GQ +EI V+ +H+GHLEFFICDT DLD PDDV TQEC NKYPLTR+ D SPIDP YPGRYY DPPCR++ETEQ+ W Y + M Y LP+ + C HCVLQM Y +G +C H G +EFNP W SECAP K DWIDL CG EEFWACSD AI + + +P P Sbjct: 10 FPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDG-WYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGQDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDDVATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYD-WRAGGGYVMTMNYDLPENLVCEHCVLQMWYYTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSI-DYCGDNEWNLAEEFWACSDIAITAETNWCLPCP 290
BLAST of mRNA_H-canaliculatus_F_contig1137.1219.1 vs. uniprot
Match: A0A6H5KDP0_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP0_9PHAE) HSP 1 Score: 265 bits (678), Expect = 7.980e-84 Identity = 128/235 (54.47%), Postives = 157/235 (66.81%), Query Frame = 1 Query: 118 LAANGGGDRFPLYFQPRAPNGNYLESNEIAKRHGVCGDPRLGGTKNTY--STPNSEWEVLDSFVSGQEIEIDVVVVFYHWGHLEFFICDTADLDHPDDVVTQECLNKYPLTRAPDDNAASPIDPEYPGRYYMDPPCRKDETEQ-----NVGVWVPQDPYNVRMRYLLPDITCTHCVLQMHYMSGDRCRHVGVDEFNPPFWNSECAPKKEDWIDLDTGSICGQGGG-YPEEFWACS 798 L GG D +PL + A NGN LE EI+KRH +CGDP G + +TPN+EWEVL +F+SGQ IE+D+V+ FYHW +F ICD ADL+ PD V TQECLN +PLTRAPDD SPIDP Y GRYY DPPCR +ET+Q + DPY ++MR+L PDI C+HC+LQ++Y +G C+HV DEFNPP W S CAP K DW+ D CG G Y EEFW+CS Sbjct: 6 LEGLGGVDVYPLQYPDFAENGNMLEPEEISKRHFLCGDPVSGSDEEDILCTTPNAEWEVLSTFISGQVIEMDIVMNFYHW--FQFSICDAADLNDPDGVGTQECLNTHPLTRAPDDGDGSPIDPNYTGRYYPDPPCRLNETDQAFYKDGLPSGTGYDPYGIKMRFLFPDIECSHCILQVYYFTGHTCKHVDYDEFNPPSWRSNCAPHKSDWVFTDLPR-CGTGKYLYAEEFWSCS 237
BLAST of mRNA_H-canaliculatus_F_contig1137.1219.1 vs. uniprot
Match: A0A6H5L279_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L279_9PHAE) HSP 1 Score: 243 bits (621), Expect = 1.270e-75 Identity = 126/246 (51.22%), Postives = 149/246 (60.57%), Query Frame = 1 Query: 106 DPTELAANGGGDRFPLYFQPRAPNGNYLESNEIAKRHGVCGDPRL--GGTKNTYSTPNSEWEVLDSFVSGQEIEIDVVVVFYHWGHLEFFICDTADLDHPDDVVTQECLNKYPLTRAPDDNAASPIDPEYPGRYYMDPPCRKDETEQNVGVWVPQDPYNVRMRYLLPDITCTHCVLQMHYMSGDRCRHVGVDEFNPPFWNSECAPKKEDWIDLDTGSICGQGGGYPEEFWACSDFAIVSSGSPPVP 837 DP L ++GGG+ FPL F P APNGNYLE NE+A RHGVCGDP NTYST +S WE L +F SGQ +E DVV+ YHWGHLEFFIC+ AD D PD + TQEC N+ P G N++MRY+LPDI C+HC+LQM Y +G+ C H+G +EFNPP W S CAP KEDW+D TG CGQGG YPEEFWACSDF+I S + VP Sbjct: 2 DPDVLESHGGGNEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQFKPSGSNTYSTASSNWEPLATFQSGQVLEFDVVMNAYHWGHLEFFICN-ADSD-PDGIPTQECFNQP--------------SPAISGN-------------------------NMKMRYVLPDIECSHCILQMVYHTGNTCYHMGYEEFNPPSWPSACAPDKEDWVDT-TGQACGQGGYYPEEFWACSDFSIASGPTCCVP 205
BLAST of mRNA_H-canaliculatus_F_contig1137.1219.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE) HSP 1 Score: 257 bits (656), Expect = 4.100e-74 Identity = 120/207 (57.97%), Postives = 145/207 (70.05%), Query Frame = 1 Query: 25 FDNVENKPYAYNAGGVKEVQARAKANTDPTELAANGGGDRFPLYFQPRAPNGNYLESNEIAKRHGVCGDPRLGGTK--NTYSTPNSEWEVLDSFVSGQEIEIDVVVVFYHWGHLEFFICDTADLDHPDDVVTQECLNKYPLTRAPDDNAASPIDPEYPGRYYMDPPCRKDETEQNVGVWVPQDPYNVRMRYLLPDITCTHCVLQMHY 639 F ++ P+ YNA G V+ RAKA TDP L GGGD +PLYF A NGNYLE++EIAKRHG+CGDP + N YST N W+VLDSF SG+ +EID+++ YHWGH EFF+C+ ++D PD V TQEC N+YPLTRA DD ASPIDP YPGRYY+DP CR ETEQ P+ YN++MRY+LPDI C CVLQM Y Sbjct: 47 FPGIDYCPHCYNARGPDYVKERAKAKTDPAVLNEYGGGDEYPLYFGDFADNGNYLETDEIAKRHGICGDPEQNADEGSNVYSTANIGWDVLDSFKSGEVLEIDIIMNAYHWGHCEFFLCNADEMDDPDGVPTQECFNRYPLTRAADDGNASPIDPNYPGRYYVDPECRAGETEQGSPEGAPKG-YNIKMRYVLPDIECDRCVLQMVY 252
BLAST of mRNA_H-canaliculatus_F_contig1137.1219.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 244 bits (623), Expect = 1.290e-73 Identity = 119/246 (48.37%), Postives = 151/246 (61.38%), Query Frame = 1 Query: 109 PTELAANGGGDRFPLYFQPRAPNGNYLESNEIAKRHGVCGDPRLGGTK--NTYSTPNSEWEVLDSFVSGQEIEIDVVVVFYHWGHLEFFICDTADL-DHPDDVVTQECLNKYPLTRAPDDNAASPIDPEYPGRYYMDPPCRKDETEQNV--GVWVPQDPYNVRMRYLLPD-ITCTHCVLQMHYMSGDRCRHVGVDEFNPPFWNSECAPKKEDWIDLDTGSICGQGGGYPEEFWACSDFAIVSSGSP 828 P + A GG +P + RA NGNY+ES+E+A+RHGVCGDP + N Y NS + VL+++ G +E+ +VV YHWGH+E F+CD DL D PD VVTQ C N+YPL RA DD PIDP GR+ +DPPCR ET+Q + G + R+ LP +TC CV+QM Y +G+ C+H G EFNPP W S CAP K DWI+ G CG G YPEEFW C+D +I S G P Sbjct: 63 PAAIRARGGDQPWPHFNGERAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDV---ATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQ-CGDGDAYPEEFWNCADVSITSDGGP 304 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1137.1219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1137.1219.1 >prot_H-canaliculatus_F_contig1137.1219.1 ID=prot_H-canaliculatus_F_contig1137.1219.1|Name=mRNA_H-canaliculatus_F_contig1137.1219.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=316bp MRSRTPRRFDNVENKPYAYNAGGVKEVQARAKANTDPTELAANGGGDRFPback to top mRNA from alignment at H-canaliculatus_F_contig1137:382..2730+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1137.1219.1 ID=mRNA_H-canaliculatus_F_contig1137.1219.1|Name=mRNA_H-canaliculatus_F_contig1137.1219.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2349bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1137:382..2730+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1137:382..2730+ >mRNA_H-canaliculatus_F_contig1137.1219.1 ID=mRNA_H-canaliculatus_F_contig1137.1219.1|Name=mRNA_H-canaliculatus_F_contig1137.1219.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1896bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1137:382..2730+ (Hapterophycus canaliculatus Oshoro5f female)back to top |