mRNA_H-canaliculatus_F_contig11296.1161.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11296.1161.1
Unique NamemRNA_H-canaliculatus_F_contig11296.1161.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11296.1161.1 vs. uniprot
Match: D7FPC4_ECTSI (Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC4_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 3.580e-116
Identity = 169/181 (93.37%), Postives = 175/181 (96.69%), Query Frame = 1 
Query:  397 VVLPFRSESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARDAFDGLFQARPRNAERLLKACGSPAEEAVVMQELRGQGAFSCWQALRDARLDLEEEVPTCFGDCLAWAKEQFASFFHDSAQALLKQHPVGSTDDEGDPFWTGVRRPPSPLKLDSANVLHREFVWWASVLRAGVYGLEVPR 939
            VVLPF+SESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARD FDGLFQARPRNAERLLKACGSP EEAVVMQELRGQGAFSCWQ+LRDARLDLEEEVP  FGDCL WAKEQFASFFHDSA+ LLKQHP+GSTDDEGDPFWTGVRRPPSPLKLDSAN+LHREFVWWASVLRAGVYG+EVPR
Sbjct:  182 VVLPFQSESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARDTFDGLFQARPRNAERLLKACGSPGEEAVVMQELRGQGAFSCWQSLRDARLDLEEEVPETFGDCLQWAKEQFASFFHDSAEELLKQHPLGSTDDEGDPFWTGVRRPPSPLKLDSANLLHREFVWWASVLRAGVYGVEVPR 362
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BLAST of mRNA_H-canaliculatus_F_contig11296.1161.1 vs. uniprot
Match: A0A6H5KGH9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH9_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 2.070e-92
Identity = 148/176 (84.09%), Postives = 154/176 (87.50%), Query Frame = 1 
Query:   40 IIVTDMDTIEKSNLNRQFLFRSGDVGKAKSAAAAAAATRMNPALRIRALEKKVGRETENFFDEDFWESLDCVINALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQASRREGCCRPVVLPFRSESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARDAFDGLFQARPRNAER 567
            IIVTDMDTIEKSNLNRQFLFRS DVGKAKS AAAAAA RMNPAL+IR LEKKVG +TE FFDEDFWES+DCV+NALDNVEARLYVD+KCVDFARPLLESGTLGTKGNTQ          VVLPF+SESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARD FDGLFQ R   A R
Sbjct:  362 IIVTDMDTIEKSNLNRQFLFRSRDVGKAKSVAAAAAAARMNPALKIRPLEKKVGADTEAFFDEDFWESVDCVVNALDNVEARLYVDTKCVDFARPLLESGTLGTKGNTQ----------VVLPFQSESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARDTFDGLFQDRSPMANR 527
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BLAST of mRNA_H-canaliculatus_F_contig11296.1161.1 vs. uniprot
Match: A0A7V5I5S4_9BACT (UBA_e1_C domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5I5S4_9BACT)

HSP 1 Score: 289 bits (740), Expect = 4.990e-86
Identity = 149/311 (47.91%), Postives = 203/311 (65.27%), Query Frame = 1 
Query:    1 ACDGDGXXXXXXXIIVTDMDTIEKSNLNRQFLFRSGDVGKAKSAAAAAAATRMNPALRIRALEKKVGRETENFFDEDFWESLDCVINALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQASRREGCCRPVVLPFRSESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARDAFDGLFQARPRNAERLLKACGSPAEEAVVMQELRGQGAFSCWQALRDARLDLEEEVPTCFGDCLAWAKEQFASFFHDSAQALLKQHPVGSTDDEGDPFWTGVRRPPSPLKLDSANVLHREFVWWASVLRAGVYGLEV 933
            AC G G       I +TDMDTIE+SNLNRQFLFR+ D+G++KS AA  AA R+NP L +RALE +VG +TE+ F +DFWE LD V  ALDNV+ARLY+D +CV + +PLL+SGTLGTKG+TQ          VV+P+ +ESYGSS DP + SIP+CTLK+ PY IEHT+ WARD F+GLF+A   + ++ L+       E +   E +G G FS   AL +   +L+   P  F DC+ WA+ +F   + ++ + LL   P    D  G PFW+G +R P+PL+ D A+ LH EF+  A+ LRA  +G+ +
Sbjct:  532 ACMGLGLASHGGSIAITDMDTIERSNLNRQFLFRATDIGRSKSLAARDAALRLNPELNVRALEMRVGPDTEHVFSDDFWEPLDGVCTALDNVDARLYIDQRCVYYLKPLLDSGTLGTKGSTQ----------VVVPYLTESYGSSRDPPERSIPMCTLKNFPYRIEHTLQWARDLFEGLFKASIEDTKQYLER----GSEYIAELEKQGPGIFS--GALENVLENLQTYRPQNFKDCVVWARNKFEELYVNNIRQLLHAFPPDMVDSSGQPFWSGTKRAPTPLRFDPADPLHLEFIVAAANLRAETFGIPL 826
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BLAST of mRNA_H-canaliculatus_F_contig11296.1161.1 vs. uniprot
Match: R7QQ62_CHOCR (Ubiquitin-activating enzyme E1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ62_CHOCR)

HSP 1 Score: 280 bits (716), Expect = 3.330e-83
Identity = 148/298 (49.66%), Postives = 188/298 (63.09%), Query Frame = 1 
Query:   40 IIVTDMDTIEKSNLNRQFLFRSGDVGKAKSAAAAAAATRMNPALRIRALEKKVGRETENFFDEDFWESLDCVINALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQASRREGCCRPVVLPFRSESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARDAFDGLFQARPRNAERLLKACGSPAEEAVVMQELRGQGAFSCWQALRDARLDLEEEVPTCFGDCLAWAKEQFASFFHDSAQALLKQHPVGSTDDEGDPFWTGVRRPPSPLKLDSANVLHREFVWWASVLRAGVYGLEV 933
            +IVTDMDTIEKSNL+RQFLFR  D+GK KS AAA A  RMNPA+++ A E +VG ETE+ F++DFWESL  V NALDNV+ARLYVD +CV + + LLESGTLGTKGNTQ          V++P  +ESYGSS DP + SIP+CTLK+ PY IEHT+ WARD F+G F+     +   LK           M ELR QG  +    L      L E+ P    DC+ WA+  F   F+   + LL   P  + D  G PFW+G +R P+P++ D  N +H EF+  ++ LRA  YGL V
Sbjct:  430 VIVTDMDTIEKSNLSRQFLFRDTDIGKPKSIAAAGAILRMNPAMKVVAHEIRVGPETESTFNDDFWESLSGVCNALDNVQARLYVDQRCVYYMKSLLESGTLGTKGNTQ----------VIVPHMTESYGSSRDPPEKSIPICTLKNFPYRIEHTLQWARDYFEGEFKTSAEESNSFLK------RGQEYMDELRRQGPGTMLATLEMLNACLLEDRPNSVQDCVEWARRAFEKLFNGEIRQLLHTFPRDNVDKNGVPFWSGTKRAPNPVEFDVNNEMHSEFIIASACLRAENYGLRV 711
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BLAST of mRNA_H-canaliculatus_F_contig11296.1161.1 vs. uniprot
Match: A0A7S1ETX1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETX1_9RHOD)

HSP 1 Score: 276 bits (707), Expect = 8.560e-82
Identity = 145/297 (48.82%), Postives = 188/297 (63.30%), Query Frame = 1 
Query:   40 IIVTDMDTIEKSNLNRQFLFRSGDVGKAKSAAAAAAATRMNPALRIRALEKKVGRETENFFDEDFWESLDCVINALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQASRREGCCRPVVLPFRSESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARDAFDGLFQARPRNAERLLKACGSPAEEAVVMQELRGQGAFSCWQALRDARLDLEEEVPTCFGDCLAWAKEQFASFFHDSAQALLKQHPVGSTDDEGDPFWTGVRRPPSPLKLDSANVLHREFVWWASVLRAGVYGLE 930
            + VTDMD IEKSNL+RQFLFR  D+G AKS AAA A   MNP + I +  ++VG ETE  F++DFW++L  V NALDNV+ARLYVD +CV F + LLESGTLGTKGN Q          VV+PF +ESYGSS DP + S+P+CTLK+ PY IEHT+ WARD F+G F+A P      +K   +  +E +  +ELR QG  +    L   + DL    P    DC+AWA+  F   F  S Q LL   P    D  G PFW+G +R P+P+K D +N +H +F+   ++LRA VYG+ 
Sbjct:  455 VYVTDMDQIEKSNLSRQFLFRDSDIGSAKSTAAANAVKAMNPRMNIESFLERVGPETEEKFNDDFWDNLSGVCNALDNVQARLYVDQRCVYFKKSLLESGTLGTKGNVQ----------VVVPFLTESYGSSRDPPEKSVPICTLKNFPYQIEHTLQWARDYFEGAFRAGPEE----IKNYATRGDEFI--EELRKQGPGTMVGVLETLKKDLITSKPESLQDCVAWARLVFEELFSSSIQQLLIAFPHDMLDSNGIPFWSGTKRAPNPIKFDISNPMHFDFIEAGALLRAQVYGIS 735
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BLAST of mRNA_H-canaliculatus_F_contig11296.1161.1 vs. uniprot
Match: A0A7J7IG68_9RHOD (E1 ubiquitin-activating protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IG68_9RHOD)

HSP 1 Score: 276 bits (707), Expect = 1.320e-81
Identity = 141/313 (45.05%), Postives = 198/313 (63.26%), Query Frame = 1 
Query:    1 ACDGDGXXXXXXXIIVTDMDTIEKSNLNRQFLFRSGDVGKAKSAAAAAAATRMNPALRIRALEKKVGRETENFFDEDFWESLDCVINALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQASRREGCCRPVVLPFRSESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARDAFDGLFQARPRNAERLLKACGSPAEEAVVMQELRGQGAFSCWQALRDARLDLEEEVPTCFGDCLAWAKEQFASFFHDSAQALLKQHPVGSTDDEGDPFWTGVRRPPSPLKLDSANVLHREFVWWASVLRAGVYGLEVPR 939
            AC G G       I +TDMDTIE+SNLNRQFLFR+ D+G++KS AA  A  R+NPAL ++A E +VG +TE  F +DFWE LD V  ALDNV+ARLY+D +C+ + +P+L+SGTLGTKG+TQ          VV+P+ +ESYGSS DP + SIP+CTLK+ PY IEHT+ WARD F+GLF+A   + ++ L+       E +V  E +G G      AL +   +L+   P  F DC+ WA+ +F   + ++ + LL   P    D  G PFW+G +R P P++ +  + LH +F+  A+ LRA  +G+   R
Sbjct:  476 ACMGLGLADHKGLIAITDMDTIERSNLNRQFLFRATDIGRSKSLAARDAVLRLNPALHVQAHEVRVGPDTEQIFSDDFWEPLDGVCTALDNVDARLYIDQRCIYYLKPMLDSGTLGTKGSTQ----------VVIPYLTESYGSSRDPPEKSIPMCTLKNFPYRIEHTLQWARDLFEGLFKASVEDTQQYLQR----GSEYIVELEKQGPGIMV--GALENVLENLQTHRPESFADCVTWARVKFEDLYTNNIRQLLHAFPSDMIDSSGQPFWSGTKRAPKPIQFNPDDSLHMDFMMAAANLRAESFGIAGSR 772
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BLAST of mRNA_H-canaliculatus_F_contig11296.1161.1 vs. uniprot
Match: A0A2V3IUT3_9FLOR (Ubiquitin-like modifier-activating enzyme 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUT3_9FLOR)

HSP 1 Score: 271 bits (694), Expect = 2.870e-81
Identity = 143/297 (48.15%), Postives = 186/297 (62.63%), Query Frame = 1 
Query:   40 IIVTDMDTIEKSNLNRQFLFRSGDVGKAKSAAAAAAATRMNPALRIRALEKKVGRETENFFDEDFWESLDCVINALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQASRREGCCRPVVLPFRSESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARDAFDGLFQARPRNAERLLKACGSPAEEAVVMQELRGQGAFSCWQALRDARLDLEEEVPTCFGDCLAWAKEQFASFFHDSAQALLKQHPVGSTDDEGDPFWTGVRRPPSPLKLDSANVLHREFVWWASVLRAGVYGLE 930
            IIVTDMDTIEKSNL+RQFLFR  D+GK+KS+AAAAA   MNP ++I   E +VG E+E+ F++ FW+SL  V NALDNV+ARLYVD +CV + + LLESGTLGTKGNTQ          V++P  +ESYGSS DP + SIP+CTLK+ PY IEHT+ WARD F+G F+         L      +++   + ELR QG  +    L+     L ++ P    DC  WA+  F   F    + LL   P  + D  G PFW+G +R P P++ D  N LH EF+  A+ LRA  YGL+
Sbjct:  235 IIVTDMDTIEKSNLSRQFLFRDTDIGKSKSSAAAAAIKVMNPTVKITPHETRVGPESEDVFNDAFWDSLSGVCNALDNVQARLYVDQRCVYYKKSLLESGTLGTKGNTQ----------VIVPHLTESYGSSRDPPEKSIPICTLKNFPYQIEHTLQWARDYFEGAFRTAAEETNTFL------SKKQEYLDELRRQGPGTMLSTLQTISSSLIDDRPHTIQDCAEWARRVFERLFSSEIRQLLHTFPKDNVDKNGVPFWSGTKRAPDPIEFDVKNSLHLEFIIAAACLRAENYGLK 515
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BLAST of mRNA_H-canaliculatus_F_contig11296.1161.1 vs. uniprot
Match: A0A7S3ZEA8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZEA8_9EUKA)

HSP 1 Score: 267 bits (682), Expect = 9.010e-81
Identity = 141/304 (46.38%), Postives = 183/304 (60.20%), Query Frame = 1 
Query:   40 IIVTDMDTIEKSNLNRQFLFRSGDVGKAKSAAAAAAATRMNPALRIRALEKKVGRETENFFDEDFWESLDCVINALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQASRREGCCRPVVLPFRSESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARDAFDGLFQARPRNAERLL-------KACGSPAEEAVVMQELRGQGAFSCWQALRDARLDLEEEVPTCFGDCLAWAKEQFASFFHDSAQALLKQHPVGSTDDEGDPFWTGVRRPPSPLKLDSANVLHREFVWWASVLRAGVYGLE 930
            I+VTDMD IE+SNLNRQFLFR  DVG  KS AA+A+  ++N +LRI     +VG ++EN ++  FW +LD VI ALDNV+ARLY+D++C+ F++P+ +SGTLGTKGNTQ          VVLP  +ESYGSS DP + SIPLCTL + PY IEHT+ WARD F GLF+  P      L       K  G    E   ++ L+                 L  + P  F DC+ WA+  F   FH+    L+   P    D EG+PFWTG +RPP+PLK    + LH EF+  A+ LRA VYGL+
Sbjct:  104 IVVTDMDAIERSNLNRQFLFRPKDVGSLKSEAASASVMQINSSLRITPHSHRVGEDSENIYNGAFWNNLDLVITALDNVQARLYLDNRCIYFSKPMFDSGTLGTKGNTQ----------VVLPRLTESYGSSQDPPEESIPLCTLHNFPYKIEHTIQWARDKFGGLFKVAPEEVNSYLTDPNHLEKVAGDATTELKTLELLKAS---------------LGGDKPLSFEDCIGWARRTFEDEFHNKILQLITALPPDQVDAEGNPFWTGHKRPPAPLKFSPDDPLHIEFILAAANLRAHVYGLK 382
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BLAST of mRNA_H-canaliculatus_F_contig11296.1161.1 vs. uniprot
Match: A0A8J2X3C7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3C7_9STRA)

HSP 1 Score: 272 bits (696), Expect = 2.680e-80
Identity = 145/297 (48.82%), Postives = 193/297 (64.98%), Query Frame = 1 
Query:   40 IIVTDMDTIEKSNLNRQFLFRSGDVGKAKSAAAAAAATRMNPALRIRALEKKVGRETENFFDEDFWESLDCVINALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQASRREGCCRPVVLPFRSESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARDAFDGLFQARPRNAERLLKACGSPAEEAVVMQELRGQGAFSCWQALRDARLDLEEEVPTCFGDCLAWAKEQFASFFHDSAQALLKQHPVGSTDDEGDPFWTGVRRPPSPLKLDSANVLHREFVWWASVLRAGVYGLE 930
            I+VTDMD IEKSNL+RQ LFRS D+G AKS  AA AA ++NP + +  +EK+VG ++E+ FD+ FW SLD V  ALDNV+ARLYVDSKC+   +PLLESGTLGTKGNTQ          VV+P  +E YG++ DP + SIP+CTLK+ P  IEHT+ WARD F+G F+  P +  + LKA G+ A      QEL  Q       ALR  + +L ++ P+ + DC+AWA+ +F   FHDS   LL   P       G PFW+G +R P+PL+ D+ +  H E++  A+ LRA  YGL+
Sbjct:  462 ILVTDMDRIEKSNLSRQLLFRSSDIGHAKSTRAALAAQQLNPCINVEGIEKRVGADSEDVFDDKFWSSLDGVCTALDNVDARLYVDSKCLFHHKPLLESGTLGTKGNTQ----------VVVPRLTEHYGATRDPPEKSIPVCTLKNFPNKIEHTLQWARDWFEGAFKQVPDDVNQFLKA-GNDA----FAQELNSQPNTKLDTALR-VKTNLVDQRPSSYQDCVAWARLEFQQCFHDSIAQLLHNFPADQVTASGAPFWSGAKRAPTPLQFDANDATHLEYIRSAADLRAYNYGLK 742
[Close]
BLAST of mRNA_H-canaliculatus_F_contig11296.1161.1 vs. uniprot
Match: F2UHA7_SALR5 (E1 ubiquitin-activating enzyme n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UHA7_SALR5)

HSP 1 Score: 271 bits (693), Expect = 5.930e-80
Identity = 146/300 (48.67%), Postives = 185/300 (61.67%), Query Frame = 1 
Query:   40 IIVTDMDTIEKSNLNRQFLFRSGDVGKAKSAAAAAAATRMNPALRIRALEKKVGRETENFFDEDFWESLDCVINALDNVEARLYVDSKCVDFARPLLESGTLGTKGNTQASRREGCCRPVVLPFRSESYGSSVDPEDGSIPLCTLKHHPYLIEHTVHWARDAFDGLFQARPRNAERLLKACGSPAEEAVVMQELRGQGAFSCWQALRDARLDLEEEVPTCFGDCLAWAKEQFASFFHDSAQALLKQHPVGSTDDEGDPFWTGVRRPPSPLKLDSANVLHREFVWWASVLRAGVYGLEVPR 939
            +IVTDMDTIEKSNLNRQFLFR  DV K KS  AAAAA  MNP L + A   KVG +TE  ++++F+ESLD V NALDNVEAR Y+DS+CV + +PLLESGTLGTKGNTQ          VV+P  +ESY SS DP + SIPLCTLK  PY IEHT+ WARD F+ +F+  P N    L+       ++  ++ +  +      + L   +  L    P  F DC+ WA ++F   + DS   LL   P      EG PFW+G +R PSP + D  N LH +FV  A+ LRA V+GL+  R
Sbjct:  458 LIVTDMDTIEKSNLNRQFLFRPWDVTKLKSDVAAAAAKAMNPELNVVAHANKVGPDTEALYNDEFFESLDGVANALDNVEARQYMDSRCVFYEKPLLESGTLGTKGNTQ----------VVIPHLTESYSSSQDPPEKSIPLCTLKSFPYKIEHTLQWARDLFEVMFKQTPENVNMYLR-------QSDYLENVMKKPGSEPLETLESLKESLVTHKPLSFDDCITWAVQKFTKLYRDSIMQLLHNFPPDRLTSEGVPFWSGTKRCPSPHEFDPENPLHLDFVIAAANLRANVFGLKGTR 740
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11296.1161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPC4_ECTSI3.580e-11693.37Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus ... [more]
A0A6H5KGH9_9PHAE2.070e-9284.09Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7V5I5S4_9BACT4.990e-8647.91UBA_e1_C domain-containing protein n=2 Tax=cellula... [more]
R7QQ62_CHOCR3.330e-8349.66Ubiquitin-activating enzyme E1 n=1 Tax=Chondrus cr... [more]
A0A7S1ETX1_9RHOD8.560e-8248.82Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7J7IG68_9RHOD1.320e-8145.05E1 ubiquitin-activating protein n=1 Tax=Cyanidioco... [more]
A0A2V3IUT3_9FLOR2.870e-8148.15Ubiquitin-like modifier-activating enzyme 1 n=1 Ta... [more]
A0A7S3ZEA8_9EUKA9.010e-8146.38Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A8J2X3C7_9STRA2.680e-8048.82Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F2UHA7_SALR55.930e-8048.67E1 ubiquitin-activating enzyme n=1 Tax=Salpingoeca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11296contigH-canaliculatus_F_contig11296:120..3577 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score370.9
Seed ortholog evalue5.8e-100
Seed eggNOG ortholog2880.D7FPC4
Preferred nameINTS1
KEGG koko:K03178,ko:K13138
KEGG Pathwayko04120,ko05012,map04120,map05012
GOsGO:0000428,GO:0001701,GO:0001824,GO:0001832,GO:0001833,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006351,GO:0006366,GO:0006396,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009301,GO:0009790,GO:0009792,GO:0009892,GO:0009987,GO:0010466,GO:0010467,GO:0010605,GO:0010941,GO:0010951,GO:0016070,GO:0016073,GO:0016180,GO:0016591,GO:0018130,GO:0019222,GO:0019438,GO:0030162,GO:0030880,GO:0031123,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0032039,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034470,GO:0034472,GO:0034474,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040007,GO:0042795,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043281,GO:0043628,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045861,GO:0046483,GO:0048519,GO:0048523,GO:0048589,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051336,GO:0051346,GO:0052547,GO:0052548,GO:0055029,GO:0060255,GO:0060548,GO:0061695,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0098781,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234,GO:2000116,GO:2000117
EggNOG free text desc.U2 snRNA 3'-end processing
EggNOG OGsCOG0476@1,KOG2012@2759,KOG4596@1,KOG4596@2759
EC6.2.1.45
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03041,ko04121,ko04147
Hectar predicted targeting categoryother localisation
Exons5
Model size942
Cds size942
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11296.1161.1prot_H-canaliculatus_F_contig11296.1161.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11296 120..3577 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928811.6730177-CDS-H-canaliculatus_F_contig11296:119..3111622928811.6730177-CDS-H-canaliculatus_F_contig11296:119..311Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11296 120..311 -
1696845573.6984792-CDS-H-canaliculatus_F_contig11296:119..3111696845573.6984792-CDS-H-canaliculatus_F_contig11296:119..311Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11296 120..311 -
1622928811.6859863-CDS-H-canaliculatus_F_contig11296:815..10221622928811.6859863-CDS-H-canaliculatus_F_contig11296:815..1022Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11296 816..1022 -
1696845573.7101772-CDS-H-canaliculatus_F_contig11296:815..10221696845573.7101772-CDS-H-canaliculatus_F_contig11296:815..1022Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11296 816..1022 -
1622928811.6993656-CDS-H-canaliculatus_F_contig11296:1673..18201622928811.6993656-CDS-H-canaliculatus_F_contig11296:1673..1820Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11296 1674..1820 -
1696845573.7198834-CDS-H-canaliculatus_F_contig11296:1673..18201696845573.7198834-CDS-H-canaliculatus_F_contig11296:1673..1820Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11296 1674..1820 -
1622928811.7118645-CDS-H-canaliculatus_F_contig11296:2393..25941622928811.7118645-CDS-H-canaliculatus_F_contig11296:2393..2594Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11296 2394..2594 -
1696845573.7288911-CDS-H-canaliculatus_F_contig11296:2393..25941696845573.7288911-CDS-H-canaliculatus_F_contig11296:2393..2594Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11296 2394..2594 -
1622928811.7274573-CDS-H-canaliculatus_F_contig11296:3382..35771622928811.7274573-CDS-H-canaliculatus_F_contig11296:3382..3577Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11296 3383..3577 -
1696845573.7402766-CDS-H-canaliculatus_F_contig11296:3382..35771696845573.7402766-CDS-H-canaliculatus_F_contig11296:3382..3577Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11296 3383..3577 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11296.1161.1

>prot_H-canaliculatus_F_contig11296.1161.1 ID=prot_H-canaliculatus_F_contig11296.1161.1|Name=mRNA_H-canaliculatus_F_contig11296.1161.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=314bp
ACDGDGNGGGGGGIIVTDMDTIEKSNLNRQFLFRSGDVGKAKSAAAAAAA
TRMNPALRIRALEKKVGRETENFFDEDFWESLDCVINALDNVEARLYVDS
KCVDFARPLLESGTLGTKGNTQASRREGCCRPVVLPFRSESYGSSVDPED
GSIPLCTLKHHPYLIEHTVHWARDAFDGLFQARPRNAERLLKACGSPAEE
AVVMQELRGQGAFSCWQALRDARLDLEEEVPTCFGDCLAWAKEQFASFFH
DSAQALLKQHPVGSTDDEGDPFWTGVRRPPSPLKLDSANVLHREFVWWAS
VLRAGVYGLEVPR*
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mRNA from alignment at H-canaliculatus_F_contig11296:120..3577-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11296.1161.1 ID=mRNA_H-canaliculatus_F_contig11296.1161.1|Name=mRNA_H-canaliculatus_F_contig11296.1161.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3458bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11296:120..3577- (Hapterophycus canaliculatus Oshoro5f female)
GCCTGCGATGGCGACGGCAACGGCGGCGGCGGCGGCGGAATCATCGTGAC
CGACATGGACACGATCGAGAAGAGCAACCTGAACCGGCAGTTTCTGTTCC
GCAGCGGAGACGTCGGGAAGGCGAAGAGCGCGGCGGCGGCGGCGGCGGCG
ACGCGGATGAACCCGGCCCTGAGGATCAGGGCCCTCGAGAAGAAGGTATG
CGCCCTCATCCTCATCCTCGTCCTTGTCCTCGTGCTTTCGTAGGTGTGTG
CGCGTGTATGTATGTGCGAGGGCGTACGTTTGTGTGTTGAGCGTCTCGCG
GACGGGGGCTTGTTCTCATCGGCTTGTTTTTTGTGCTTCTGATCGTGAGC
GGGGTTCTCGGATGATGCGGGCTCTGATGTTCAGGGCGCCGGAGACGGGC
TGTGGAACGTGGACGCAGAATGTCGTAAAGGGACAGGAAAAGGAAGGTAG
GTAGAGGTTGTTGGCGCCGTGAGTCGGAGCCTCGTTCTGCCACACTCCAC
CTACTTATTCCGCAGATGCACTCCCCAATCTCCTCTTGGGTGATGTTTTT
TAGGAGAAAAAGTCAACAGCCCCAAAGGAACGCCCTCGTCTGAGACAACA
GTAAAGCGGCTCAGGGGGATTGGTTTGAATCCCTCACAGTCAGGCTTCAG
CATGGGTTTTGCGCGGTGACTGCTGTGTTTTTTTTTGTCGCTCGAAACCG
ACCAAAAGTCGCCGTGGTGTGTCATCTGCGGGGCAGAGTAGATACAAATT
TACCCCGGTGGCCACAGGCCGCTCGCCGCCTCTGCAGCAGCTACCTTTTG
CTGCCGTACGCAGATCAAGAACTCTCGCGGCATGATCCGCGTCTTCGGTT
CCCCGTGCCAAGATGCCAGACGAAGCCCGACACAAGCGGAGGCCGGCGTC
GCCACGCCCTGGTCCCCCCTTCCTCGCTCCTCCTCCTCCGACCACCCCGC
GCCTCCGTATCGGACGGCCTTTCTTCCTCGCAGGTGGGTCGTGAAACGGA
GAACTTCTTCGACGAGGACTTCTGGGAGTCGCTGGACTGCGTGATCAACG
CCCTGGACAACGTCGAGGCCCGCCTGTACGTCGACTCCAAGTGCGTCGAC
TTCGCGAGGCCCCTGCTCGAGTCGGGCACGCTCGGTACCAAGGGCAACAC
GCAGGCGAGTCGGCGGGAAGGCTGTTGCAGGCCTGTCTGGGTGCTTTTTC
GGCGTCTCGATCGACCCAGCGCAGTGTGGCTCTTGCTGCGGAGACGAGGG
CCTTGTTTTTTTACAGCCAATCGTCGATGTAGTTGGTTCCTCGGCTCCTC
CATCCGAGCGAGAGTCGACGCTTCGTGCCCTTGGTCTGCGGGTACAGGAA
AAACATTTTTCCCGCAACCCGTCGGCGCTGTTCTTGCGTCATGGGTCGTT
CTTCAGCCTCTCCGTCTGTCCATCCGTCTTCACCGCACGGTGCGTGTCGT
TTCGTTCCTTGTTCTGCCACAGATCGCCGCTGCAGGTGATCCTTCCGCTC
CCCTATCCATCCAAACCGCCGCAACAATCTCGCCTTCTGTCTCCAACAGT
ACGCACACGTCCGTCCGCTGTGTGTGTACGTACGCACGATACGCACGTTC
ACCTTTTCCGAGGCTAGTCGCCGCTGTGGACAGTCCTGGCCATGGCCACG
CTCCCTCTCCTTGCCTTCCCTCGCGCACAAGGTCATAATCGTACGACGCT
CTCCGCTCGTCGCCGCCGTAACGACCCACCTGCCTCTGCTCTCCACTGCA
TTAATAGGTGGTCCTGCCCTTCCGGTCGGAGTCTTACGGCAGCAGCGTCG
ACCCCGAGGACGGCTCCATCCCGCTCTGCACGCTCAAGCACCACCCCTAC
CTCATCGAGCACACCGTGCACTGGGCGAGGGACGCCTTCGACGGACTCTT
TCAGGTGAAGGTTGTAGCGAGTGCACACGCGCGTGGACGCGCGTGCGCCA
GGGTTGGGGTGTTTGTATTTCGTTCAGGCACGGGAATGGATCTGAGATGC
CGTGCCGGTCTCTCTTGTTAGACACAGAAGGTGGGAAGGGCGGTAGGGGA
GCGGAAAGTTAAGCTTTCTCCGGGCAACACCCCCCCCCTCACCGCGAGTC
GCAAGCTTGTATCTTTTGCTCGCACTAATGCACAGGTTAAGCGTGAAACT
CGCCCCCCGACGTATGAATGCGTCAGCTTGCCGTGGTCCGTTTCTGCTCT
CCTGCCACCGCGAAACACTTCGGAGGTGTCGACCCAGCCCGGGTTTCACA
CACCGACTCCCCGCCGGCCCCCCGGCCCTTACACCCACCCATCGATCCCT
CCTTTGGGTTTCCAACAAGGACTCATCCTTGACGTGTTCTCGTAGCTGGC
ATGGGAAACGTGACGCAGCAGCTTGAGCGCGGCAGCGTGGCGGACGTCAT
CGACCGCGGTTCCTCCCGTGTGCGACCCGGTCTTTGGTACCCCACCCGCC
CCACCATCCTGCCATCCACGGACCCCCCGCCCCGCCCCGCCCCGCTCCGG
TCCACCACGTACACGCCTCTCTCGCTTTTCGTGCCCGTCGTTTTGACGCC
CGCAGGCGCGGCCGCGGAACGCGGAGAGGCTGCTGAAGGCGTGCGGGTCT
CCGGCTGAGGAGGCGGTGGTGATGCAGGAGCTGAGGGGCCAGGGGGCGTT
CTCTTGCTGGCAGGCCCTGCGGGACGCCCGGCTGGACCTGGAGGAGGAGG
TGCCGACGTGCTTCGGGGACTGCCTGGCGTGGGCCAAGGAGCAGTTCGCG
TCCTTCTTTCACGTAAGGGTTGAGCGTTGCCTTTGGTGGCGATCTTGGCG
GCTGGTGGTAGTGGAGCGTAGTGATCGTGTCGCTGCTGCTGCTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTGGTTGTGGTTGTTGTGTGTGTCGCTGAT
GAGGTTCCTTCCCGTGGCGTGGCTCGTTGCTACGACGGGCTTGCTCGCGA
GGCGGAGAGCAAGCCCGGAAGGCTCGCCGAGAGAGAAGAATAAACCGAGG
GCGGTCAAGCTGTCCGCTAGCGTTGCGGATGATACCCGGTGCCTCATACA
AGACGACGATAACCTACGCCCGAACCCTCGAACAGTCTCACACGCCGCGA
GCCGCCAACGACAGTGCTGTCCCTCGACCCCTCCTCGGCTACACGCGAAA
CAAACACGGGAGAAGAGCTAAGCAGGAGGCAGAGCTGGGCAAACCAAAGG
AATGCGAAGACGACCCCGAGCAAAAAACTCCACCCCAAAACATGAACACA
ACGCTCGTCGTGGCAGGATTCGGCTCAAGCCTTGCTGAAGCAGCACCCGG
TCGGCAGCACCGACGACGAAGGCGACCCCTTCTGGACCGGGGTTCGTCGA
CCGCCGTCCCCCCTCAAGCTCGACTCGGCCAACGTTCTTCACCGGGAGTT
CGTATGGTGGGCGTCGGTGCTCCGCGCGGGGGTGTACGGGTTAGAGGTCC
CGAGGTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11296:120..3577-

>mRNA_H-canaliculatus_F_contig11296.1161.1 ID=mRNA_H-canaliculatus_F_contig11296.1161.1|Name=mRNA_H-canaliculatus_F_contig11296.1161.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1884bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11296:120..3577- (Hapterophycus canaliculatus Oshoro5f female)
GCCTGCGATGGCGACGGCAACGGCGGCGGCGGCGGCGGAATCATCGTGAC
CGACATGGACACGATCGAGAAGAGCAACCTGAACCGGCAGTTTCTGTTCC
GCAGCGGAGACGTCGGGAAGGCGAAGAGCGCGGCGGCGGCGGCGGCGGCG
ACGCGGATGAACCCGGCCCTGAGGATCAGGGCCCTCGAGAAGAAGGCCTG
CGATGGCGACGGCAACGGCGGCGGCGGCGGCGGAATCATCGTGACCGACA
TGGACACGATCGAGAAGAGCAACCTGAACCGGCAGTTTCTGTTCCGCAGC
GGAGACGTCGGGAAGGCGAAGAGCGCGGCGGCGGCGGCGGCGGCGACGCG
GATGAACCCGGCCCTGAGGATCAGGGCCCTCGAGAAGAAGGTGGGTCGTG
AAACGGAGAACTTCTTCGACGAGGACTTCTGGGAGTCGCTGGACTGCGTG
ATCAACGCCCTGGACAACGTCGAGGCCCGCCTGTACGTCGACTCCAAGTG
CGTCGACTTCGCGAGGCCCCTGCTCGAGTCGGGCACGCTCGGTACCAAGG
GCAACACGCAGGCGAGTCGGCGGGAAGGCTGTTGCAGGCCTGTGGGTCGT
GAAACGGAGAACTTCTTCGACGAGGACTTCTGGGAGTCGCTGGACTGCGT
GATCAACGCCCTGGACAACGTCGAGGCCCGCCTGTACGTCGACTCCAAGT
GCGTCGACTTCGCGAGGCCCCTGCTCGAGTCGGGCACGCTCGGTACCAAG
GGCAACACGCAGGCGAGTCGGCGGGAAGGCTGTTGCAGGCCTGTGGTCCT
GCCCTTCCGGTCGGAGTCTTACGGCAGCAGCGTCGACCCCGAGGACGGCT
CCATCCCGCTCTGCACGCTCAAGCACCACCCCTACCTCATCGAGCACACC
GTGCACTGGGCGAGGGACGCCTTCGACGGACTCTTTCAGGTGGTCCTGCC
CTTCCGGTCGGAGTCTTACGGCAGCAGCGTCGACCCCGAGGACGGCTCCA
TCCCGCTCTGCACGCTCAAGCACCACCCCTACCTCATCGAGCACACCGTG
CACTGGGCGAGGGACGCCTTCGACGGACTCTTTCAGGCGCGGCCGCGGAA
CGCGGAGAGGCTGCTGAAGGCGTGCGGGTCTCCGGCTGAGGAGGCGGTGG
TGATGCAGGAGCTGAGGGGCCAGGGGGCGTTCTCTTGCTGGCAGGCCCTG
CGGGACGCCCGGCTGGACCTGGAGGAGGAGGTGCCGACGTGCTTCGGGGA
CTGCCTGGCGTGGGCCAAGGAGCAGTTCGCGTCCTTCTTTCACGCGCGGC
CGCGGAACGCGGAGAGGCTGCTGAAGGCGTGCGGGTCTCCGGCTGAGGAG
GCGGTGGTGATGCAGGAGCTGAGGGGCCAGGGGGCGTTCTCTTGCTGGCA
GGCCCTGCGGGACGCCCGGCTGGACCTGGAGGAGGAGGTGCCGACGTGCT
TCGGGGACTGCCTGGCGTGGGCCAAGGAGCAGTTCGCGTCCTTCTTTCAC
GATTCGGCTCAAGCCTTGCTGAAGCAGCACCCGGTCGGCAGCACCGACGA
CGAAGGCGACCCCTTCTGGACCGGGGTTCGTCGACCGCCGTCCCCCCTCA
AGCTCGACTCGGCCAACGTTCTTCACCGGGAGTTCGTATGGTGGGCGTCG
GTGCTCCGCGCGGGGGTGTACGGGTTAGAGGTCCCGAGGTGAGATTCGGC
TCAAGCCTTGCTGAAGCAGCACCCGGTCGGCAGCACCGACGACGAAGGCG
ACCCCTTCTGGACCGGGGTTCGTCGACCGCCGTCCCCCCTCAAGCTCGAC
TCGGCCAACGTTCTTCACCGGGAGTTCGTATGGTGGGCGTCGGTGCTCCG
CGCGGGGGTGTACGGGTTAGAGGTCCCGAGGTGA
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