mRNA_H-canaliculatus_F_contig11217.1102.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11217.1102.1 vs. uniprot
Match: D8LCK0_ECTSI (Rab11D, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK0_ECTSI) HSP 1 Score: 134 bits (338), Expect = 7.560e-37 Identity = 67/87 (77.01%), Postives = 74/87 (85.06%), Query Frame = 1 Query: 187 QIWDTAGQERYASMMKTYYRKAKGSLLVYDVTSRPSFVGLEAWRKHLDANADPLCVSVVTGNKSDMPPEEHEVSPEEGMAYATKVPR 447 QIWDTAGQERYASMMKTYYRKAKGSLL YD T+R SFVGLEAWRKHL+ANADP CVS+VTGNKSD+ + VSP +G AYA +V R Sbjct: 58 QIWDTAGQERYASMMKTYYRKAKGSLLFYDFTNRFSFVGLEAWRKHLEANADPRCVSIVTGNKSDV--SDQLVSPNDGEAYARQVSR 142
BLAST of mRNA_H-canaliculatus_F_contig11217.1102.1 vs. uniprot
Match: A0A6H5JPX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPX3_9PHAE) HSP 1 Score: 135 bits (340), Expect = 1.780e-36 Identity = 66/82 (80.49%), Postives = 73/82 (89.02%), Query Frame = 1 Query: 187 QIWDTAGQERYASMMKTYYRKAKGSLLVYDVTSRPSFVGLEAWRKHLDANADPLCVSVVTGNKSDMPPEEHEVSPEEGMAYA 432 QIWDTAGQERYASMMKTYYRKAKGSLLVYDVT+R SFVGLEAWRKHL+ANADP CVS+V GNKSD+ + VSP++G AYA Sbjct: 58 QIWDTAGQERYASMMKTYYRKAKGSLLVYDVTNRSSFVGLEAWRKHLEANADPRCVSIVAGNKSDV--SDQLVSPKDGEAYA 137
BLAST of mRNA_H-canaliculatus_F_contig11217.1102.1 vs. uniprot
Match: A0A835YTJ1_9STRA (GTPase Ypt3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ1_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.940e-28 Identity = 59/82 (71.95%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 187 QIWDTAGQERYASMMKTYYRKAKGSLLVYDVTSRPSFVGLEAWRKHLDANADPLCVSVVTGNKSDMPPEEHEVSPEEGMAYA 432 QIWDTAGQERYASMMKTYYRKAKG+LLVYDVTS+ SF LE WRK+L+ANADP CVS+V GNK DM E V AYA Sbjct: 57 QIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDM---EGVVDEAAARAYA 135
BLAST of mRNA_H-canaliculatus_F_contig11217.1102.1 vs. uniprot
Match: A0A836CB79_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB79_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.860e-24 Identity = 56/90 (62.22%), Postives = 64/90 (71.11%), Query Frame = 1 Query: 175 VDGR----QIWDTAGQERYASMMKTYYRKAKGSLLVYDVTSRPSFVGLEAWRKHLDANADPLCVSVVTGNKSDMPPEEHEVSPEEGMAYA 432 VDG+ QIWDTAGQERYA+MMKTYYR+AKG++LVYDVT SF LE WR L NA P CV+VV GNK DM P VS ++ AYA Sbjct: 81 VDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDMEPA---VSAQQAQAYA 167
BLAST of mRNA_H-canaliculatus_F_contig11217.1102.1 vs. uniprot
Match: A0A7S2RFG9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFG9_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.930e-19 Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 172 SVDGR----QIWDTAGQERYASMMKTYYRKAKGSLLVYDVTSRPSFVGLEAWRKHLDANADPLCVSVVTGNKSDMPPEEHEVSPEEGMAYATK 438 +VDG QIWDTAGQER+++MM TYYRKAKG+LL++ VT R SFV EAWR+ + A+P ++ GNK D+ E +VSPEE A K Sbjct: 58 TVDGEAVKAQIWDTAGQERFSTMMGTYYRKAKGALLLFSVTDRESFVDAEAWRQQVTELAEPDIEVLLVGNKVDVQ-ESRKVSPEEAQTMADK 149
BLAST of mRNA_H-canaliculatus_F_contig11217.1102.1 vs. uniprot
Match: A0A485LS46_9STRA (Aste57867_24372 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LS46_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 7.250e-18 Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 187 QIWDTAGQERYASMMKTYYRKAKGSLLVYDVTSRPSFVGLEAWRKHLDANADPLCVSVVTGNKSDMPPEEHEVSPEEGMAYAT 435 QIWDTAGQER+ +MM TYYRKA G+LLV+DVT + +F G++ W L A+P +V+ GNK+D P + VS E AYAT Sbjct: 203 QIWDTAGQERFHAMMSTYYRKAVGALLVFDVTDKTTFDGVQKWLDQLLQVAEPGLTTVLVGNKADADPAKRAVSTVEAQAYAT 285
BLAST of mRNA_H-canaliculatus_F_contig11217.1102.1 vs. uniprot
Match: A0A5D6Y601_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y601_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.300e-17 Identity = 42/82 (51.22%), Postives = 57/82 (69.51%), Query Frame = 1 Query: 187 QIWDTAGQERYASMMKTYYRKAKGSLLVYDVTSRPSFVGLEAWRKHLDANADPLCVSVVTGNKSDMPPEEHEVSPEEGMAYA 432 QIWDTAGQER+ +MM TYYRKA G+LL++DV R S +G++ W L + A+P +V+ GNK D+ P E VSP+E +A Sbjct: 179 QIWDTAGQERFHAMMSTYYRKAVGALLIFDVRDRQSLLGVDKWLDQLLSVAEPGLHAVLVGNKCDLLPPERAVSPDEAQHFA 260
BLAST of mRNA_H-canaliculatus_F_contig11217.1102.1 vs. uniprot
Match: K3X866_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X866_GLOUD) HSP 1 Score: 86.3 bits (212), Expect = 5.570e-17 Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 187 QIWDTAGQERYASMMKTYYRKAKGSLLVYDVTSRPSFVGLEAWRKHLDANADPLCVSVVTGNKSDMPPEEHEVSPEEGMAYA 432 QIWDTAGQER+ +MM TYYRKA G+LL++DV R S +G+E W + L A+P +++ GNK D+ P E VS EE +A Sbjct: 103 QIWDTAGQERFHAMMATYYRKAVGALLIFDVRDRQSLLGVEKWLEQLLNVAEPGLHAILVGNKCDIAPPERVVSTEEAEQFA 184
BLAST of mRNA_H-canaliculatus_F_contig11217.1102.1 vs. uniprot
Match: M2Y664_GALSU (Rab family, other n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y664_GALSU) HSP 1 Score: 85.1 bits (209), Expect = 7.680e-17 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 187 QIWDTAGQERYASMMKTYYRKAKGSLLVYDVTSRPSFVGLEAWRKHLDANADPLCVSVVTGNKSDMPPEEHEVSPEEGMAYATK 438 QIWDTAGQERY ++ YYR A G+LLVYD++ + SF+G+E W K L +AD V ++ GNKSD+ VS EEG +A K Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLVGNKSDLK-HLRAVSTEEGKEFAEK 145
BLAST of mRNA_H-canaliculatus_F_contig11217.1102.1 vs. uniprot
Match: A0A024T985_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T985_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 8.980e-17 Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 187 QIWDTAGQERYASMMKTYYRKAKGSLLVYDVTSRPSFVGLEAWRKHLDANADPLCVSVVTGNKSDMPPEEHEVSPEEGMAYA 432 QIWDTAGQER+ +MM TYYRKA G+LLV+DVT + +F G++ W L A+P +V+ GNK+D+ + VS E AYA Sbjct: 192 QIWDTAGQERFHAMMSTYYRKAVGALLVFDVTDKTTFDGIQKWLDQLVQVAEPGLATVLVGNKADVDASKRAVSTMEAQAYA 273 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11217.1102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11217.1102.1 >prot_H-canaliculatus_F_contig11217.1102.1 ID=prot_H-canaliculatus_F_contig11217.1102.1|Name=mRNA_H-canaliculatus_F_contig11217.1102.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=103bp MMKTYYRKAKGSLLVYDVTSRPSFVGLEAWRKHLDANADPLCVSVVTGNKback to top mRNA from alignment at H-canaliculatus_F_contig11217:3120..4266- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11217.1102.1 ID=mRNA_H-canaliculatus_F_contig11217.1102.1|Name=mRNA_H-canaliculatus_F_contig11217.1102.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1147bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11217:3120..4266- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11217:3120..4266- >mRNA_H-canaliculatus_F_contig11217.1102.1 ID=mRNA_H-canaliculatus_F_contig11217.1102.1|Name=mRNA_H-canaliculatus_F_contig11217.1102.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=618bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11217:3120..4266- (Hapterophycus canaliculatus Oshoro5f female)back to top |