mRNA_H-canaliculatus_F_contig1121.1094.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1121.1094.1
Unique NamemRNA_H-canaliculatus_F_contig1121.1094.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1121.1094.1 vs. uniprot
Match: A0A6H5JCZ7_9PHAE (Amidase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ7_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.360e-26
Identity = 50/62 (80.65%), Postives = 58/62 (93.55%), Query Frame = 1 
Query:    1 YYGQMGAEGNMKGFVDALQGEKMLPGYASLRQIAGIPNFLRPALSWVLRNVVGDERKASILG 186
            YYGQMGAEGNMK FVD++QGE+MLP YA+LRQ+AG PN LRPALSWVLRNV+GDER+ASI+G
Sbjct:  228 YYGQMGAEGNMKRFVDSIQGERMLPSYAALRQLAGFPNCLRPALSWVLRNVLGDERRASIVG 289
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BLAST of mRNA_H-canaliculatus_F_contig1121.1094.1 vs. uniprot
Match: D7FZ96_ECTSI (Amidase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ96_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 3.060e-26
Identity = 50/62 (80.65%), Postives = 58/62 (93.55%), Query Frame = 1 
Query:    1 YYGQMGAEGNMKGFVDALQGEKMLPGYASLRQIAGIPNFLRPALSWVLRNVVGDERKASILG 186
            YYGQMGAEGNMK FVD++QGE+MLP YA+LRQ+AG PN LRPALSWVLRNV+GDER+ASI+G
Sbjct:  400 YYGQMGAEGNMKRFVDSIQGERMLPSYAALRQLAGFPNCLRPALSWVLRNVLGDERRASIVG 461
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BLAST of mRNA_H-canaliculatus_F_contig1121.1094.1 vs. uniprot
Match: A0A0M0J3E9_9EUKA (Amidase signature enzyme n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J3E9_9EUKA)

HSP 1 Score: 64.3 bits (155), Expect = 1.630e-10
Identity = 28/61 (45.90%), Postives = 44/61 (72.13%), Query Frame = 1 
Query:    1 YYGQMGAEGNMKGFVDALQGEKMLPGYASLRQIAGIPNFLRPALSWVLRNVVGDERKASIL 183
            Y   + A+GN +GF+D + GEK+ P YA L Q+A +PN++RP LS V+R+ +G+ RKA ++
Sbjct:  332 YVALLSADGNFRGFLDGIDGEKLHPNYAFLCQVACVPNWIRPMLSAVMRHGLGEPRKADLV 392
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BLAST of mRNA_H-canaliculatus_F_contig1121.1094.1 vs. uniprot
Match: A0A836CNU8_9STRA (Amidase signature domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU8_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.280e-10
Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 1 
Query:    1 YYGQMGAEGNMKGFVDALQGEKMLPGYASLRQIAGIPNFLRPALSWVLRNVVGDERKASIL 183
            YYGQ+G+EGNM GFV ALQGE++L  Y  L+ ++ +PN +RP L+ +L +++G  R AS+L
Sbjct:  313 YYGQLGSEGNMAGFVAALQGERLLGCYKRLKTMSDMPNIVRPLLARIL-DLLGHRRHASLL 372
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BLAST of mRNA_H-canaliculatus_F_contig1121.1094.1 vs. uniprot
Match: A0A7S2K5Q6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K5Q6_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 8.630e-8
Identity = 27/55 (49.09%), Postives = 40/55 (72.73%), Query Frame = 1 
Query:   19 AEGNMKGFVDALQGEKMLPGYASLRQIAGIPNFLRPALSWVLRNVVGDERKASIL 183
            AEGNM+GF +AL+GE ++P Y +L   + +PNFLRP +S +L     DER+AS++
Sbjct:  418 AEGNMRGFTEALEGEALIPHYNTLYAASNLPNFLRPLVSLML-----DERRASLV 467
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BLAST of mRNA_H-canaliculatus_F_contig1121.1094.1 vs. uniprot
Match: A0A7S3LKN9_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKN9_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.060e-6
Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 1 
Query:    4 YGQMG-AEGNMKGFVDALQGEKMLPGYASLRQIAGIPNFLRPALSWVLRNVVGDERKASIL 183
            Y Q+G AEGNM+GF++ L+GE +   Y SL+Q A +PNFLRP ++  +     DER+  ++
Sbjct:   30 YVQLGSAEGNMRGFIEGLEGEDLSAMYTSLKQAADLPNFLRPLIAAFI-----DERRGGLV 85
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BLAST of mRNA_H-canaliculatus_F_contig1121.1094.1 vs. uniprot
Match: A0A4D9D795_9STRA (Amidase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D795_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 2.730e-6
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 1 
Query:    1 YYGQMGAEGNMKGFVDALQGEKMLPGYASLRQIAGIPNFLRPALSWVLRNVVGDERK 171
            YY  M AEG ++ ++DAL+GE M+P Y ++R  A  P+FLRP L   L  + G++R+
Sbjct:   16 YYNIMTAEGGLRSYIDALEGEAMIPMYRNIRLAACFPDFLRPLLHTALY-LTGEKRR 71
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BLAST of mRNA_H-canaliculatus_F_contig1121.1094.1 vs. uniprot
Match: W7TYS1_9STRA (Amidase protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYS1_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 3.730e-6
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 1 
Query:    1 YYGQMGAEGNMKGFVDALQGEKMLPGYASLRQIAGIPNFLRPALSWVLRNVVGDERK 171
            YY  M AEG ++ ++DAL+GE M+P Y ++R  A  P+FLRP L   L  + G++R+
Sbjct:  403 YYNIMTAEGGLRSYIDALEGEAMIPMYRNIRLAACFPDFLRPLLHTALY-LTGEKRR 458
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1121.1094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JCZ7_9PHAE1.360e-2680.65Amidase domain-containing protein n=1 Tax=Ectocarp... [more]
D7FZ96_ECTSI3.060e-2680.65Amidase domain-containing protein n=1 Tax=Ectocarp... [more]
A0A0M0J3E9_9EUKA1.630e-1045.90Amidase signature enzyme n=1 Tax=Chrysochromulina ... [more]
A0A836CNU8_9STRA2.280e-1050.82Amidase signature domain-containing protein n=1 Ta... [more]
A0A7S2K5Q6_9STRA8.630e-849.09Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S3LKN9_9STRA1.060e-644.26Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A4D9D795_9STRA2.730e-643.86Amidase domain-containing protein n=1 Tax=Nannochl... [more]
W7TYS1_9STRA3.730e-643.86Amidase protein n=1 Tax=Nannochloropsis gaditana T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1121contigH-canaliculatus_F_contig1121:124..312 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score100.1
Seed ortholog evalue3.6e-19
Seed eggNOG ortholog2880.D7FZ96
Preferred nameFAAH
KEGG rclassRC00010,RC00100,RC00950,RC01025
KEGG koko:K01426,ko:K08332,ko:K15528,ko:K19176
KEGG ReactionR02540,R03096,R03180,R03909,R05551,R05590
KEGG Pathwayko00330,ko00360,ko00380,ko00627,ko00643,ko01120,ko04723,map00330,map00360,map00380,map00627,map00643,map01120,map04723
GOsGO:0000139,GO:0001676,GO:0003008,GO:0003013,GO:0003018,GO:0003674,GO:0003824,GO:0004040,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005783,GO:0005789,GO:0005794,GO:0006082,GO:0006629,GO:0006631,GO:0006690,GO:0007275,GO:0007399,GO:0008015,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009062,GO:0009894,GO:0009987,GO:0010720,GO:0010975,GO:0010976,GO:0012505,GO:0016020,GO:0016021,GO:0016042,GO:0016054,GO:0016298,GO:0016787,GO:0016788,GO:0016810,GO:0016811,GO:0017064,GO:0019222,GO:0019369,GO:0019752,GO:0019866,GO:0022008,GO:0030154,GO:0031090,GO:0031224,GO:0031323,GO:0031329,GO:0031344,GO:0031346,GO:0031966,GO:0031967,GO:0031975,GO:0031984,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032787,GO:0033559,GO:0034248,GO:0034251,GO:0035150,GO:0035296,GO:0042175,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046395,GO:0046983,GO:0047372,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048679,GO:0048680,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050880,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0052689,GO:0060284,GO:0065007,GO:0065008,GO:0070570,GO:0070572,GO:0071704,GO:0072329,GO:0080134,GO:0080135,GO:0090066,GO:0097746,GO:0097756,GO:0098588,GO:0098791,GO:0098827,GO:0120035,GO:1901568,GO:1901575,GO:1903034,GO:1903036,GO:2000026
EggNOG free text desc.fatty acid amide hydrolase activity
EggNOG OGsCOG0154@1,KOG1212@2759
EC3.5.1.4,3.5.1.99
COG Functional cat.J
BiGG ReactioniMM904.YDR242W,iND750.YDR242W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029,ko04131
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size189
Cds size177
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928800.998576-UTR-H-canaliculatus_F_contig1121:123..1351622928800.998576-UTR-H-canaliculatus_F_contig1121:123..135Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1121 124..135 +
1696845570.0182943-UTR-H-canaliculatus_F_contig1121:123..1351696845570.0182943-UTR-H-canaliculatus_F_contig1121:123..135Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1121 124..135 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928801.013999-CDS-H-canaliculatus_F_contig1121:135..3121622928801.013999-CDS-H-canaliculatus_F_contig1121:135..312Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1121 136..312 +
1696845570.0299842-CDS-H-canaliculatus_F_contig1121:135..3121696845570.0299842-CDS-H-canaliculatus_F_contig1121:135..312Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1121 136..312 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1121.1094.1prot_H-canaliculatus_F_contig1121.1094.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1121 136..312 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1121.1094.1

>prot_H-canaliculatus_F_contig1121.1094.1 ID=prot_H-canaliculatus_F_contig1121.1094.1|Name=mRNA_H-canaliculatus_F_contig1121.1094.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=59bp
MGAEGNMKGFVDALQGEKMLPGYASLRQIAGIPNFLRPALSWVLRNVVGD
ERKASILG*
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mRNA from alignment at H-canaliculatus_F_contig1121:124..312+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1121.1094.1 ID=mRNA_H-canaliculatus_F_contig1121.1094.1|Name=mRNA_H-canaliculatus_F_contig1121.1094.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=189bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1121:124..312+ (Hapterophycus canaliculatus Oshoro5f female)
TACTACGGGCAGATGGGCGCGGAGGGGAACATGAAAGGTTTCGTGGACGC
GCTGCAGGGGGAGAAAATGTTGCCGGGGTACGCCTCCCTCCGCCAGATCG
CGGGCATCCCCAACTTCCTGCGCCCTGCCCTGTCTTGGGTGCTGCGGAAC
GTTGTGGGGGACGAGAGGAAAGCCTCCATCCTTGGGTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1121:124..312+

>mRNA_H-canaliculatus_F_contig1121.1094.1 ID=mRNA_H-canaliculatus_F_contig1121.1094.1|Name=mRNA_H-canaliculatus_F_contig1121.1094.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=354bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1121:124..312+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGGCGCGGAGGGGAACATGAAAGGTTTCGTGGACGCGCTGCAGGGGGA
GAAAATGTTGCCGGGGTACGCCTCCCTCCGCCAGATCGCGGGCATCCCCA
ACTTCCTGCGCCCTGCCCTGTCTTGGGTGCTGCGGAACGTTGTGGGGGAC
GAGAGGAAAGCCTCCATCCTTGGGTAAATGGGCGCGGAGGGGAACATGAA
AGGTTTCGTGGACGCGCTGCAGGGGGAGAAAATGTTGCCGGGGTACGCCT
CCCTCCGCCAGATCGCGGGCATCCCCAACTTCCTGCGCCCTGCCCTGTCT
TGGGTGCTGCGGAACGTTGTGGGGGACGAGAGGAAAGCCTCCATCCTTGG
GTAA
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