mRNA_H-canaliculatus_F_contig11075.977.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11075.977.1
Unique NamemRNA_H-canaliculatus_F_contig11075.977.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig11075.977.1 vs. uniprot
Match: D7FRT2_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT2_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 7.230e-94
Identity = 142/194 (73.20%), Postives = 169/194 (87.11%), Query Frame = 1
Query:    1 QTELNNASPGDTIYIPAGTHYVSLTTAVDGTEDDPITIRNAIGADRADCVLKGDDRSRVLEILHSYYIIEGFTIDGDNDSSDYREQLIYVEGSRDPSEVDGLQSSLTGVQILGMSLINAGKECIRLRYFVTDSLVQANDIGPCGIEDFEQGSDGSNGEGVYIGTALNQIDDKNGDNVVDVCARITVADNEIDTQ 582
            Q  L++ASPGDTIYIPAGTH VSLTT VDGTED+PITIRN +G    DCVL+GDDR+RVLE+LH++YII+GFTIDGD+ S DY+EQL+Y+EGSRDPSEVDG+ SS+TGV + GM L NAGKEC+R+RYF T+ +VQ N+IGPCGI+DF+Q SDGSNGEGVYIGTALNQID+KNGD+VVD C  I V +NEIDTQ
Sbjct:   62 QALLDDASPGDTIYIPAGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGDYKEQLLYIEGSRDPSEVDGVDSSITGVNVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIQDFQQDSDGSNGEGVYIGTALNQIDEKNGDDVVDECTGIVVMNNEIDTQ 255          
BLAST of mRNA_H-canaliculatus_F_contig11075.977.1 vs. uniprot
Match: D7FRK8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK8_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 3.500e-32
Identity = 72/170 (42.35%), Postives = 98/170 (57.65%), Query Frame = 1
Query:   10 LNNASPGDTIYIPAGTHYVSLTTAVDGTEDDPITIRNAIGADRADCVLKGDDRSRVLEILHSYYIIEGFTIDGDNDSSDYRE--QLIYVEGSRDPSEVDGLQSSLTGVQILGMSLINAGKECIRLRYFVTDSLVQANDIGPCGIEDFEQGSDGSNGEGVYIGTALNQIDD 513
            L    PGD+ Y+  G +Y    T+  GT D PITI      D A C+   + + RVL+I H YYI+EG   DGD+D  +       IYV G+   S  +G+ SS+TG +++ + + N G EC+  RYFVT S V    I  CG+E FE G  G  GEG+Y+GTAL+Q+DD
Sbjct:   32 LKVVEPGDSCYLAKGDYYHDGITSTHGTADAPITITG----DSAACIKGSNTQDRVLQIAHDYYIVEGICFDGDHDGDNPPNVATAIYVLGADKKSTKNGVTSSVTGFKMIDLEIKNFGSECVHFRYFVTHSEVTGCTIQHCGMEAFEDGGGGKVGEGIYVGTALDQVDD 197          
BLAST of mRNA_H-canaliculatus_F_contig11075.977.1 vs. uniprot
Match: A0A0G0X4X9_9BACT (Secreted protein n=1 Tax=Candidatus Daviesbacteria bacterium GW2011_GWA2_40_9 TaxID=1618424 RepID=A0A0G0X4X9_9BACT)

HSP 1 Score: 129 bits (324), Expect = 3.730e-32
Identity = 80/199 (40.20%), Postives = 112/199 (56.28%), Query Frame = 1
Query:    1 QTELNNASPGDTIYIPAGTHYVSLTTAVDGTEDDPITIRNAIGADRADCVLKGDDRSRVLEILHSYYIIEGFTIDG----DNDSSDYREQLIYVEGSRDPSEVDGLQSSLTGVQILGMSLINAGKECIRLRYFVTDSLVQANDIGPCGIEDFEQGSDGSNGEGVYIGTALNQIDD-KNGDNVVDVCARITVADNEIDTQ 582
            Q  ++ A  G+TI +  GT+   + T  +GT D PI I         + V+KG  + R+ EI H    + GFTIDG     + SS YR++L+YV+G          +S +TG+++LGM+L NAG ECIRLRYF  ++ +  N I  CG+ DF+    G NGEG+YIGTA  Q+ D KN  +  D      + DN IDTQ
Sbjct:  120 QKAVDLAQGGETIALAPGTYSQDIITKRNGTSDKPIIISGP-----KEAVIKGGGKGRIFEINHDSITLRGFTIDGLFGSSSSSSGYRDKLLYVQGKE-------TKSGVTGLKVLGMTLKNAGGECIRLRYFAQNNEIAGNTITNCGVYDFKFNGGGKNGEGIYIGTAPEQLGDGKNPTSDPDQSNGNFIHDNTIDTQ 306          
BLAST of mRNA_H-canaliculatus_F_contig11075.977.1 vs. uniprot
Match: A0A0G0APH1_9BACT (Beta_helix domain-containing protein n=2 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A0G0APH1_9BACT)

HSP 1 Score: 128 bits (322), Expect = 5.540e-32
Identity = 80/199 (40.20%), Postives = 111/199 (55.78%), Query Frame = 1
Query:    1 QTELNNASPGDTIYIPAGTHYVSLTTAVDGTEDDPITIRNAIGADRADCVLKGDDRSRVLEILHSYYIIEGFTIDGDNDSSD----YREQLIYVEGSRDPSEVDGLQSSLTGVQILGMSLINAGKECIRLRYFVTDSLVQANDIGPCGIEDFEQGSDGSNGEGVYIGTALNQIDD-KNGDNVVDVCARITVADNEIDTQ 582
            Q  ++ A  G+TI +  G +     +  +G  D PI I+        D ++KG    RV+EI H Y I++GFT+DG   SSD    YR++LIYV G          ++ +TG++I  M++ NAG ECIRLRYF T + +  N I  CG+EDF+   DG NGEG+Y+GTA  Q+ D KN     D      + DN IDTQ
Sbjct:  102 QKAIDLAQAGETINLSEGIYLQDFVSKRNGKSDAPIVIKGT-----KDSIIKGGGNGRVIEINHDYIILDGFTVDGFYGSSDKAESYRDKLIYVLGKEK-------KNGVTGLRIKNMNIKNAGGECIRLRYFATKNEIVNNLIENCGVEDFKFDGDGKNGEGIYVGTAPEQLKDGKNPTQDPDQSNENWIHDNVIDTQ 288          
BLAST of mRNA_H-canaliculatus_F_contig11075.977.1 vs. uniprot
Match: A0A1F7I8U6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_12 TaxID=1802056 RepID=A0A1F7I8U6_9BACT)

HSP 1 Score: 125 bits (313), Expect = 1.870e-31
Identity = 70/175 (40.00%), Postives = 100/175 (57.14%), Query Frame = 1
Query:    1 QTELNNASPGDTIYIPAGTHYVSLTTAVDGTEDDPITIRNAIGADRADCVLKGDDRSRVLEILHSYYIIEGFTIDGD----NDSSDYREQLIYVEGSRDPSEVDGLQSSLTGVQILGMSLINAGKECIRLRYFVTDSLVQANDIGPCGIEDFEQGSDGSNGEGVYIGTALNQIDD 513
            Q  ++ A PGDTI +  G ++  + T   GT ++PITI         D V+KG  ++R+ EI H +  + GFTIDG     ++ + YR++LIY  G  +       +  +TG++I+ MS+ NAG ECIRLRYF   + +  N I  CG+ DF     G NGEGVYIGTA  Q+ D
Sbjct:    2 QKAVDRAQPGDTINLLPGVYFQDVVTKRSGTPENPITISGT-----KDAVVKGGGKARIFEINHDFISLSGFTIDGQYGELDNKNGYRDKLIYALGKEE-------RKGVTGLKIMSMSIKNAGGECIRLRYFAQRNEIAYNTIIRCGVSDFSFSGGGKNGEGVYIGTAPEQLKD 164          
BLAST of mRNA_H-canaliculatus_F_contig11075.977.1 vs. uniprot
Match: A0A1F7IHP9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_35_13 TaxID=1802055 RepID=A0A1F7IHP9_9BACT)

HSP 1 Score: 125 bits (315), Expect = 4.460e-31
Identity = 78/199 (39.20%), Postives = 112/199 (56.28%), Query Frame = 1
Query:    1 QTELNNASPGDTIYIPAGTHYVSLTTAVDGTEDDPITIRNAIGADRADCVLKGDDRSRVLEILHSYYIIEGFTIDGDNDSSD----YREQLIYVEGSRDPSEVDGLQSSLTGVQILGMSLINAGKECIRLRYFVTDSLVQANDIGPCGIEDFEQGSDGSNGEGVYIGTALNQIDD-KNGDNVVDVCARITVADNEIDTQ 582
            Q  ++NA PG+TI +  G +     +   GT + PITI  +      D V+KG  ++RV+EI H + I+  FT+DG +  S     YR++LIYV G          +  +TG++IL M++ NAG EC+RLRYF  ++ +  N I  CGI DFE    G NGEG+YIGTA  Q+ D KN  + +D      +  N I+TQ
Sbjct:   86 QKAIDNAQPGETIKLLPGVYNQDFVSKRSGTAEKPITITGS-----KDVVVKGGGKARVIEINHDHIILSKFTVDGLHGDSGRVEGYRDKLIYVLGK-------SARKGVTGLKILSMNIKNAGGECVRLRYFAQNNEIAYNSINRCGIVDFEFKGGGKNGEGIYIGTAPEQLKDGKNPTSDIDESNNNLIHHNTINTQ 272          
BLAST of mRNA_H-canaliculatus_F_contig11075.977.1 vs. uniprot
Match: A0A7V4PDA4_9BACT (Beta_helix domain-containing protein n=1 Tax=Candidatus Moranbacteria bacterium TaxID=2045217 RepID=A0A7V4PDA4_9BACT)

HSP 1 Score: 125 bits (313), Expect = 1.000e-30
Identity = 81/200 (40.50%), Postives = 117/200 (58.50%), Query Frame = 1
Query:    1 QTELNNASPGDTIYIPAGTHYVSLTTAVDGTEDDPITIRNAIGADRADCVLKGDDR-SRVLEILHSYYIIEGFTIDG-DNDSSD---YREQLIYVEGSRDPSEVDGLQSSLTGVQILGMSLINAGKECIRLRYFVTDSLVQANDIGPCGIEDFEQGSDGSNGEGVYIGTALNQIDD-KNGDNVVDVCARITVADNEIDTQ 582
            Q  ++ A PGD + +  G ++    +A +G ++ PITI    G+ +A  V+KG  + SR++EI H Y  ++GF++DG   D+SD   YR++LIYV+G             +TG+QI  M++ NAG ECIRLRYF  ++ +  N I  CG+ DF     G NGEG+YIGTA  Q+DD KN  +  D      +  NEIDTQ
Sbjct:   94 QDAVDKAQPGDGVMLLEGEYFQDFVSARNGLKEKPITI---YGSSKA--VIKGSGKNSRIIEINHDYIFLKGFSVDGLSGDASDKKNYRDKLIYVQGKEK-------NKGVTGLQIKEMTIKNAGGECIRLRYFAQENEISHNVIKNCGVYDFLFDGKGKNGEGIYIGTAPEQLDDNKNPTSDRDKSDNNWIHHNEIDTQ 281          
BLAST of mRNA_H-canaliculatus_F_contig11075.977.1 vs. uniprot
Match: UPI0019A78091 (Uncharacterized protein n=1 Tax=Chloroflexales bacterium TaxID=2725990 RepID=UPI0019A78091)

HSP 1 Score: 126 bits (316), Expect = 2.510e-30
Identity = 80/198 (40.40%), Postives = 115/198 (58.08%), Query Frame = 1
Query:    1 QTELNNASPGDTIYIPAGTHYVSLTTAVDGTEDDPITIRNAIGADRADCVLKGDDRSRVLEILHSYYIIEGFTIDGDNDSSDYREQLIYVEGSRDPSEVDGLQSSLTGVQILGMSLINAGKECIRLRYFVTDSLVQANDIGPCGIEDFEQGS---DGSNGEGVYIGTALNQ-IDDKNGDNVVDVCARITVADNEIDTQ 582
            Q  L+ A  GDT+ +  GT+   + T  +G    PITI   +G   A  V+KG   +R++EI HSY ++ GFTIDG    S YR++LIYV G +        +++L+G ++LG+++ NAG EC+RLRY+V +S +  N    CG  D+  G+    G NGEGVYIGTA  Q  D KN D+  D+     V +N  +TQ
Sbjct:   66 QKGLDVAQAGDTVTLAPGTYTQDVLTKRNGAAGAPITI---VGPSNA--VVKGGGNARIIEINHSYTVLSGFTIDGQYSGSSYRDKLIYVLGKQ-------ARTALSGTKLLGLTIRNAGGECVRLRYYVQNSEIANNSFQNCGRVDYPNGNWGGSGKNGEGVYIGTAPEQRTDGKNPDSSPDLSNGNWVHNNAFNTQ 251          
BLAST of mRNA_H-canaliculatus_F_contig11075.977.1 vs. uniprot
Match: A0A350ALB2_9CHLR (DUF1565 domain-containing protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A350ALB2_9CHLR)

HSP 1 Score: 120 bits (300), Expect = 2.530e-29
Identity = 76/199 (38.19%), Postives = 109/199 (54.77%), Query Frame = 1
Query:    1 QTELNNASPGDTIYIPAGTHYVSLTTAVDGTEDDPITIRNAIGADRADCVLKGDDRSRVLEILHSYYIIEGFTIDGDNDSSD----YREQLIYVEGSRDPSEVDGLQSSLTGVQILGMSLINAGKECIRLRYFVTDSLVQANDIGPCGIEDFEQGSDGSNGEGVYIGTALNQIDD-KNGDNVVDVCARITVADNEIDTQ 582
            Q  ++ A PG  I +  G +  ++ T  +GT  +PI I+    A     VLKG   + + EI HSY  ++GFTIDG   + D    YR++LIY  G          +  +T ++IL M L N+G+E +RLRYF  D+ +  N I  CG+ DF+ G    NGEG+YIGTA NQ++D +N  N +D      +  N IDTQ
Sbjct:   27 QKAIDRAQPGTMIMLEKGNYLQNVITKRNGTPSNPIIIKGTASA-----VLKGGGGAHIFEINHSYITLDGFTIDGLFGNPDKAIGYRDKLIYAIGKE-------AKCGVTDLRILNMILKNSGEEAVRLRYFAHDNEIAWNTITNCGVYDFKFGGGADNGEGIYIGTAPNQLNDGRNSTNDLDQSDNNWIHHNTIDTQ 213          
BLAST of mRNA_H-canaliculatus_F_contig11075.977.1 vs. uniprot
Match: UPI0019A581FA (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Chloroflexales bacterium TaxID=2725990 RepID=UPI0019A581FA)

HSP 1 Score: 121 bits (304), Expect = 2.890e-29
Identity = 82/202 (40.59%), Postives = 112/202 (55.45%), Query Frame = 1
Query:    1 QTELNNASPGDTIYIPAGTHYVSLTTAVDGTEDDPITIRNAIGADRADCVLKGDDRSRVLEILHSYYIIEGFTIDG----DNDSSDYREQLIYVEGSRDPSEVDGLQSSLTGVQILGMSLINAGKECIRLRYFVTDSLVQANDIGPCGIEDFEQGS-DGS--NGEGVYIGTALNQIDD-KNGDNVVDVCARITVADNEIDTQ 582
            Q  ++ A PGDTI +  G++   L +  +G     ITI        AD V+KG    RV++I H +  + GFT+DG       S  YR++L++V+GS   S V+GL+       +LGMS+ NAG EC+RLRYFV  + +  N IGPCG +D+  G  DG   NGEG+YIGTA  Q+ D KN     D      V DN  +TQ
Sbjct:   62 QRAVDLAQPGDTINLAPGSYLQDLLSRRNGAASARITITGP-----ADAVVKGAGNDRVIQINHDHMTLSGFTLDGLHGGSGSSRPYRDKLLFVQGSEPRSGVEGLK-------VLGMSIRNAGGECVRLRYFVRAAELSDNTIGPCGQDDYPNGVWDGGDKNGEGIYIGTAPEQLTDGKNPTADPDASRDNWVHDNRFNTQ 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11075.977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRT2_ECTSI7.230e-9473.20EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FRK8_ECTSI3.500e-3242.35FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A0G0X4X9_9BACT3.730e-3240.20Secreted protein n=1 Tax=Candidatus Daviesbacteria... [more]
A0A0G0APH1_9BACT5.540e-3240.20Beta_helix domain-containing protein n=2 Tax=Candi... [more]
A0A1F7I8U6_9BACT1.870e-3140.00Uncharacterized protein n=1 Tax=Candidatus Roizman... [more]
A0A1F7IHP9_9BACT4.460e-3139.20Uncharacterized protein n=1 Tax=Candidatus Roizman... [more]
A0A7V4PDA4_9BACT1.000e-3040.50Beta_helix domain-containing protein n=1 Tax=Candi... [more]
UPI0019A780912.510e-3040.40Uncharacterized protein n=1 Tax=Chloroflexales bac... [more]
A0A350ALB2_9CHLR2.530e-2938.19DUF1565 domain-containing protein n=1 Tax=Dehaloco... [more]
UPI0019A581FA2.890e-2940.59Right-handed parallel beta-helix repeat-containing... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11075contigH-canaliculatus_F_contig11075:598..3558 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score299.7
Seed ortholog evalue1e-78
Seed eggNOG ortholog2880.D7FRT2
KEGG koko:K06560
KEGG Pathwayko04145,ko05152,map04145,map05152
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04090,ko04091,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEsV-1-164
Ec32 orthologEc-25_000290.1
Exons6
Model size582
Cds size582
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11075.977.1prot_H-canaliculatus_F_contig11075.977.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11075 598..3558 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928783.257076-CDS-H-canaliculatus_F_contig11075:597..6981622928783.257076-CDS-H-canaliculatus_F_contig11075:597..698Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11075 598..698 -
1696845562.4828358-CDS-H-canaliculatus_F_contig11075:597..6981696845562.4828358-CDS-H-canaliculatus_F_contig11075:597..698Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11075 598..698 -
1622928783.2750444-CDS-H-canaliculatus_F_contig11075:1218..13191622928783.2750444-CDS-H-canaliculatus_F_contig11075:1218..1319Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11075 1219..1319 -
1696845562.498342-CDS-H-canaliculatus_F_contig11075:1218..13191696845562.498342-CDS-H-canaliculatus_F_contig11075:1218..1319Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11075 1219..1319 -
1622928783.2921195-CDS-H-canaliculatus_F_contig11075:1803..19091622928783.2921195-CDS-H-canaliculatus_F_contig11075:1803..1909Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11075 1804..1909 -
1696845562.5069556-CDS-H-canaliculatus_F_contig11075:1803..19091696845562.5069556-CDS-H-canaliculatus_F_contig11075:1803..1909Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11075 1804..1909 -
1622928783.3092582-CDS-H-canaliculatus_F_contig11075:2350..24141622928783.3092582-CDS-H-canaliculatus_F_contig11075:2350..2414Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11075 2351..2414 -
1696845562.5153255-CDS-H-canaliculatus_F_contig11075:2350..24141696845562.5153255-CDS-H-canaliculatus_F_contig11075:2350..2414Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11075 2351..2414 -
1622928783.3331456-CDS-H-canaliculatus_F_contig11075:2792..29211622928783.3331456-CDS-H-canaliculatus_F_contig11075:2792..2921Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11075 2793..2921 -
1696845562.5235405-CDS-H-canaliculatus_F_contig11075:2792..29211696845562.5235405-CDS-H-canaliculatus_F_contig11075:2792..2921Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11075 2793..2921 -
1622928783.3530347-CDS-H-canaliculatus_F_contig11075:3477..35581622928783.3530347-CDS-H-canaliculatus_F_contig11075:3477..3558Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11075 3478..3558 -
1696845562.5317678-CDS-H-canaliculatus_F_contig11075:3477..35581696845562.5317678-CDS-H-canaliculatus_F_contig11075:3477..3558Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11075 3478..3558 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11075.977.1

>prot_H-canaliculatus_F_contig11075.977.1 ID=prot_H-canaliculatus_F_contig11075.977.1|Name=mRNA_H-canaliculatus_F_contig11075.977.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=194bp
QTELNNASPGDTIYIPAGTHYVSLTTAVDGTEDDPITIRNAIGADRADCV
LKGDDRSRVLEILHSYYIIEGFTIDGDNDSSDYREQLIYVEGSRDPSEVD
GLQSSLTGVQILGMSLINAGKECIRLRYFVTDSLVQANDIGPCGIEDFEQ
GSDGSNGEGVYIGTALNQIDDKNGDNVVDVCARITVADNEIDTQ
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mRNA from alignment at H-canaliculatus_F_contig11075:598..3558-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11075.977.1 ID=mRNA_H-canaliculatus_F_contig11075.977.1|Name=mRNA_H-canaliculatus_F_contig11075.977.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2961bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11075:598..3558- (Hapterophycus canaliculatus Oshoro5f female)
CAGACCGAACTCAATAATGCGTCTCCTGGCGATACCATCTACATCCCGGC GGGCACGCACTACGTCAGCCTGACCACCGCGGTGAGATTCTTCTCACTAT CTTAAAGCCTATTTTTTGTTTTGATGTTTGCCGTCATGGACTACTTGGTA GGGTGCGAGAGTGTGGGAGGGGGGGGTCGTTGCAGCCGTCTTGGTTCGCC AACTGTCATGTAAACGTATTCGGTACATGCCGGGGAACAAGATGGCGTGG GTAGAATGGCGTCACCGTCGGCGGGAACGCCTGCGAGCACGTTGTGGAAA CCCGCTTTTCGTGCTACAGCACCTGTAGGGGAAGCAAGCACGGGCGGGCG GGTCGATCGGTCACCATGCCACGTCAATCAATCCAAAAGGAACAAAACCC TGCGGGGTTTTGCACTCTTTTTTTTTTATGTTCAGAAGAAGAGCGAAACG TGTACCATGGCTGCAGGATTTTCAGATAACTTTTTTTGTCTCCACATGTC GACGGGGGGCAGACATGGGCTTGATTGATGTCTAGAAGATTTTCCCATGG GCCTTGAGCGTCTTGCCAGCGAGAGCGACGCCGTGTTCCGCATGTCTGAT ATCATCGCTCGGGGTGTGCGTGTGCATGCACGAGCAGGTGGACGGCACCG AAGACGATCCGATCACCATCAGAAACGCCATTGGCGCTGACAGAGCGGAC TGCGTGCTCAAGGGTGACGACAGGTCCAGGGTGCTGGAGATCCTGCACAG CTACTACATCATCGAGGTGAGAAGACAACGGAAGCTGCTGTTGACTGGAA ACCCGCGGCGGCGGAGCGTATTTCGTGTCGGGCCGTCTCGTGGATGTACG TATATCCTCACGTTTTTGGTTTTGGGTTCCACCCCGACCTGGTCTCGAAT GCCCGGGGACCGAGCACTAAAGAAGATCGGCACGTTTGTTTTCTACGTTT GACTCGAAAATTTACCAAGCATGACACGAGGTCTGAAGAGTGTCTTTACA GGCGTTTCCGCAGGCGTCTCAGGAGGAGGAGCTTGTGGTCGCCTCCGTTT TTCGTGTGACGCCTTGAGTGCCACGGCTGCCCACGGCTGTGCAGCATCAT CTGACATCTTCCCCTTGTACACCTGTGCATGGCGCGAATGCCAGGGCTTC ACTATTGACGGCGACAACGATTCCAGCGACTACAGAGAGCAGCTCATCTA CGTCGAAGGTATGGCGTGTCGGCTTGATGTGAAGCGTCCTGACACGGGAC TTACTGGGATACAGCAGTCTGTGGCGTTGCGCACATCGTAGCTTGTTTTA GCCTGTTGTGTTGGGCTTGTCTCCAGCTATCCGAGTCACTGCACTCCCGC CGGAGTGCAAATTTTATAGAGAAACTGTTGGCGTTTTGTCATGGGGGGGA GGGGCAACCATGGTGTGCGGCGAGGCGAAGACGTATGAGAGCAGGAACAA TGCTCGTATGATAGCGGCGGGTCCAGGACGGGTTTGCTCGCAGCGAAGCA AACCACGAGTCGCAGAGACAGGAAGGAGCGAAAGCAAGACATACGAGTAG GCAGAGGGAGAAAGAGGGAGGGGCCCCGTCAAATGTACCGTACGAAAGTA ACCAACCCCCTTGCCCTTCCTTGTCACTTGCTCGCTTGCGTCTTGACAGG TTCCCGGGACCCAAGCGAAGTGGACGGACTGCAGTCGTCCCTCACCGGGG TCCAGATCCTGGGGATGTCTCTCATCAACGCCGGCAAGGAATGCATCCGC CTCCGGTAAGCATCGTCGTGTGAACCTTATGTTGTGCTTGTCCGAAAACA ACAGCACTCCTCTTGTTTTCGGTTTCTTTTTCGAGGGGATTTTTTTCGTC TGTTTGTTTGTTCTTGGGTCGCTAGCAAACGGAGTGTAGGAAGGTGGGGC GAAAAGTGCCAGGAGCACCTTCTTCTTTTTGCGTCTTCGACCGCCCCCGT GCTTTGAACAGAGGACGCGGTCGTCGATTGCGGGAGCCGGATCTTACCAC GAACATGCAGGCATTCGTATCATCACTAGTTACTGCGCACGACCTGACCT GCCTTACGGTTTTGTCACCGAAAGAGTGCTTGATCGACGATGGACGATGT GGGGACAGCCCCCGTGGCATCTTTGGTAGCGGACAAATCTCAATTCCCCT GACACGAGGCTGAACCCCCTTCTCCCTCCTTCCCTCACCCCCCATCTTCG AAACGTCCTTGGTACTCCGTATAACGTTGCATCTTGAAGATACTTCGTGA CGGACTCCCTGGTTCAGGCCAACGACATCGGCCCCTGCGGCATCGAAGAC TTCGAGCAAGGATCCGATGGTTCCAACGGAGAGGGCGTATGTGAGTCACT GTAGTTACTGCTGCAGATAATACCACGCCGCTGTCGTTGATGGTTTTCGA GACTGTCTTCGCCTTACTGCTGTTGTCCCTATTGTCGTCGTCGTCGCTGT TGTTGTTGCCTTGGTGTTGATCGCGCTCACTGTTGGTGGCGGCGGCGGCG TGTGAGATCACCGTGTTGATGTTGATCGCGGTCACTAGTGGTGGTGGTGG TGGTGGTTTGTGAGGTAATCGCGTTGGCGTTGATCGCTGTCGCTGGTGCT GGTGCTGTCACCGCGCTGGATCGCCGTTGCTGCATCTGTGCGTTGTCCAC GCGCACGGTTTTTTCTTGAATGAGAAACGGGACGACCGCGCGTCGCACGC GCTGCCCTACCCTGCCCTGGCCTGGCCTGCCCTTCACCTCGGATGACGCG TTGCCACACACATGCCCACACACTCATCCACCCAAAGCCTGTAATCCGTG ACGACCCCCCCCCCCCTGACCCCCCGGCCGCCCGCTGATCAATTCGCAAC AAACAAAAAGACATCGGCACGGCCTTGAACCAGATCGACGACAAGAACGG GGACAACGTCGTGGACGTGTGCGCCCGCATCACCGTCGCGGACAACGAAA TCGACACACAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11075:598..3558-

>mRNA_H-canaliculatus_F_contig11075.977.1 ID=mRNA_H-canaliculatus_F_contig11075.977.1|Name=mRNA_H-canaliculatus_F_contig11075.977.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1164bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11075:598..3558- (Hapterophycus canaliculatus Oshoro5f female)
CAGACCGAACTCAATAATGCGTCTCCTGGCGATACCATCTACATCCCGGC
GGGCACGCACTACGTCAGCCTGACCACCGCGCAGACCGAACTCAATAATG
CGTCTCCTGGCGATACCATCTACATCCCGGCGGGCACGCACTACGTCAGC
CTGACCACCGCGGTGGACGGCACCGAAGACGATCCGATCACCATCAGAAA
CGCCATTGGCGCTGACAGAGCGGACTGCGTGCTCAAGGGTGACGACAGGT
CCAGGGTGCTGGAGATCCTGCACAGCTACTACATCATCGAGGTGGACGGC
ACCGAAGACGATCCGATCACCATCAGAAACGCCATTGGCGCTGACAGAGC
GGACTGCGTGCTCAAGGGTGACGACAGGTCCAGGGTGCTGGAGATCCTGC
ACAGCTACTACATCATCGAGGGCTTCACTATTGACGGCGACAACGATTCC
AGCGACTACAGAGAGCAGCTCATCTACGTCGAAGGGCTTCACTATTGACG
GCGACAACGATTCCAGCGACTACAGAGAGCAGCTCATCTACGTCGAAGGT
TCCCGGGACCCAAGCGAAGTGGACGGACTGCAGTCGTCCCTCACCGGGGT
CCAGATCCTGGGGATGTCTCTCATCAACGCCGGCAAGGAATGCATCCGCC
TCCGGTTCCCGGGACCCAAGCGAAGTGGACGGACTGCAGTCGTCCCTCAC
CGGGGTCCAGATCCTGGGGATGTCTCTCATCAACGCCGGCAAGGAATGCA
TCCGCCTCCGATACTTCGTGACGGACTCCCTGGTTCAGGCCAACGACATC
GGCCCCTGCGGCATCGAAGACTTCGAGCAAGGATCCGATGGTTCCAACGG
AGAGGGCGTATATACTTCGTGACGGACTCCCTGGTTCAGGCCAACGACAT
CGGCCCCTGCGGCATCGAAGACTTCGAGCAAGGATCCGATGGTTCCAACG
GAGAGGGCGTATACATCGGCACGGCCTTGAACCAGATCGACGACAAGAAC
GGGGACAACGTCGTGGACGTGTGCGCCCGCATCACCGTCGCGGACAACGA
AATCGACACACAGACATCGGCACGGCCTTGAACCAGATCGACGACAAGAA
CGGGGACAACGTCGTGGACGTGTGCGCCCGCATCACCGTCGCGGACAACG
AAATCGACACACAG
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