mRNA_H-canaliculatus_F_contig11056.964.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11056.964.1 vs. uniprot
Match: D7G7G7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7G7_ECTSI) HSP 1 Score: 256 bits (655), Expect = 7.860e-81 Identity = 120/160 (75.00%), Postives = 137/160 (85.62%), Query Frame = 1 Query: 1 MHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRCIEAVNDEGKICMQQHALIDEEVQGPFIRRQRVVAGHFTWGFQEHVHQPFVMFTTLRNPLELFVSGQQYLNRKAARHFAHAVSLVQETMAEATENHYLRGGVMMPQGKGNAKSVGFIYRLVDPVPSTSS 480 MHLWKCAGSSLRHLLRDWAEAK QDIGIVVRC + V+ GKIC++ H+LI+E Q PFIR +VVAGHFTWGFQ HV QP+VMFTTLRNPLELFVSGQQYLNRKA+RHFAHAVSLV++T+ A + H LRG VM+P+G GN KSVGFIYRLVDPV + S+ Sbjct: 59 MHLWKCAGSSLRHLLRDWAEAKEQDIGIVVRCTDVVSKTGKICLKHHSLINERFQAPFIRLHQVVAGHFTWGFQNHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTILRAIKQHQLRGDVMVPEGMGNTKSVGFIYRLVDPVQANST 218
BLAST of mRNA_H-canaliculatus_F_contig11056.964.1 vs. uniprot
Match: A0A6H5JGJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ5_9PHAE) HSP 1 Score: 119 bits (297), Expect = 2.190e-29 Identity = 64/157 (40.76%), Postives = 98/157 (62.42%), Query Frame = 1 Query: 1 MHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRCIEAVNDEGKICMQQHALIDEEVQGPFIRRQRVVAGHFTWGFQEHVHQPFVMFTTLRNPLELFVSGQQYLNRKAARHFAHAVSLVQETMAEATENHYLRGGVM----MPQGKGNAKSVG-FIYRLV 456 +H++KCAGS+LR +L WAEA+ + IV RC ++ +IC+ L+DE VQ + RQ+V+AGHF WGFQ H+ +P++M T LRNPLE++VS QQY +++ + A + V + M + T Y G + MP G + + +G F++RLV Sbjct: 44 LHVFKCAGSTLRRMLVAWAEAEDELGAIVHRC-NYTSEAREICLAHFKLVDEPVQLELLSRQKVLAGHFLWGFQRHLRRPYLMVTALRNPLEVYVSAQQYTHKRKTKTLEKAQAFVSKAMRK-TLRQYGDGPALGEEEMPFGGKSPQQIGGFVFRLV 198
BLAST of mRNA_H-canaliculatus_F_contig11056.964.1 vs. uniprot
Match: A0A6H5KGA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA9_9PHAE) HSP 1 Score: 122 bits (305), Expect = 2.340e-29 Identity = 56/80 (70.00%), Postives = 66/80 (82.50%), Query Frame = 1 Query: 1 MHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRCIEAVNDEGKICMQQHALIDEEVQGPFIRRQRVVAGHFTWGFQEHVHQP 240 MHLWKCAGSSLRHLLRDWAEAKGQ IGIVVRC + V+ GKIC+++H+LI+E Q PFIR +VVAGHFTWG +H+P Sbjct: 177 MHLWKCAGSSLRHLLRDWAEAKGQYIGIVVRCTDVVSKTGKICLKRHSLINERFQAPFIRLHQVVAGHFTWG----LHRP 252
BLAST of mRNA_H-canaliculatus_F_contig11056.964.1 vs. uniprot
Match: A0A6H5JGQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ3_9PHAE) HSP 1 Score: 117 bits (292), Expect = 7.070e-28 Identity = 71/174 (40.80%), Postives = 94/174 (54.02%), Query Frame = 1 Query: 1 MHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRCIEAVNDEGKICMQQHALIDEEVQGPFIRRQRVVAGHFTWGFQEHVHQPFVMFTTLRNPLELFVSGQQYLNRKAARHF-----AHAVSLVQETMAEATE-----------------NHYLRGGVMMPQGKGNAKSVGFIYRLV 456 +H++KCAGS+LR + DWA+A+G IV C E V EG IC+ +H LI E VQ + +Q+++AGHF WGFQ V +PF+M T+LRNPLE FVSG+Q+L+ AHA + V M A + LRG P G GFI+RLV Sbjct: 157 LHVFKCAGSTLRQMFVDWAKAEGASGAIVTSCDE-VQKEGVICLAKHELIKESVQMKMLLKQKILAGHFIWGFQRLVEKPFLMVTSLRNPLEAFVSGRQFLHPDMTETLEQASAAHAQAFVSYAMLNALGIDGPGHVAMLGERASLGHALLRGRRQSPDQLG-----GFIFRLV 324
BLAST of mRNA_H-canaliculatus_F_contig11056.964.1 vs. uniprot
Match: A0A6H5JAP0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAP0_9PHAE) HSP 1 Score: 113 bits (282), Expect = 5.150e-27 Identity = 59/144 (40.97%), Postives = 80/144 (55.56%), Query Frame = 1 Query: 1 MHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRCIEAVNDEGKICMQQHALIDEEVQGPFIRRQRVVAGHFTWG-------------------FQEHVHQPFVMFTTLRNPLELFVSGQQYLNRKAARHFAHAVSLVQETMAEATE 375 +H+WKC G++LR L+ DWA ++G V C E K+C+ + LI E QG FI RQ+V+AGHF WG FQ + +P + TTLRNPLELFVSG+QYLNR + AV +V+ M ++ E Sbjct: 66 LHVWKCGGTTLRRLMCDWANSEGLPCATVAGCGHLSLKERKVCLLNYKLIFPEQQGEFIARQKVLAGHFRWGESRVTSACHTVTRTLFASGFQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSKAVQVVERAMRKSLE 209
BLAST of mRNA_H-canaliculatus_F_contig11056.964.1 vs. uniprot
Match: A0A6H5KCZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ6_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 4.010e-19 Identity = 46/122 (37.70%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 1 MHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRC-IEAVNDEGKICMQ-QHALIDEEVQGPFIRRQRVVAGHFTWGFQEHVHQPFVMFTTLRNPLELFVSGQQYLNRKAARHFAHAVSLVQETM 360 +H++KCAG++LR +L WA+ +G + IV C + + G+IC+ Q+ L+D + + +++AGHF W F+ +V P++M TTLRNPLELFVS QQ++++ + +V+ V ++M Sbjct: 107 LHVFKCAGTTLREVLTTWAKLEGLNGAIVEYCRSKTFTNVGRICLNSQNDLMDPIREKWLVAGSKLLAGHFLWDFRHYVTPPYLMVTTLRNPLELFVSSQQFMHKAETKTLDDSVAFVGQSM 228
BLAST of mRNA_H-canaliculatus_F_contig11056.964.1 vs. uniprot
Match: D8LHE4_ECTSI (Similar to heparin sulfate O-sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE4_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 1.120e-16 Identity = 43/117 (36.75%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 16 CAGSSLRHLLRDWAEAKGQDIGIVVRC-IEAVNDEGKICMQ-QHALIDEEVQGPFIRRQRVVAGHFTWGFQEHVHQPFVMFTTLRNPLELFVSGQQYLNRKAARHFAHAVSLVQETM 360 CAG++LR +L WA+ +G + IV C + + G+IC+ Q+ L++ + + +++AGHF W F+ +V P++M TTLRNPLELFVS QQ++++ + +V+ V ++M Sbjct: 2 CAGTTLREVLTTWAKLEGWNGAIVEYCRSKTFTNAGRICLNSQNDLMNPIREKWLVAGSKLLAGHFLWDFRHYVTPPYLMVTTLRNPLELFVSSQQFMHKAETKTLDDSVAFVGQSM 118
BLAST of mRNA_H-canaliculatus_F_contig11056.964.1 vs. uniprot
Match: A0A6H5KPF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF0_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 3.750e-13 Identity = 44/129 (34.11%), Postives = 66/129 (51.16%), Query Frame = 1 Query: 1 MHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRCIEAVND-------EGKICM--QQHALIDEEVQGPFIRRQRVVAGHFTWGFQEHVHQPFVMFTTLRNPLELFVSGQQYLNRKAARHFAHAVSLVQETM 360 +H++KCAG+SLR + +A+ G ++ C + + IC+ + H DE + + +V+AGHF W F+ P++M TTLRNPLELFVS Q+ +R R A A V M Sbjct: 95 LHVFKCAGTSLREVFMAFAKTNGWTGAVIAGCSKTQKEFQFHDPPGSVICVRHEDHRPKDENIGRWLVSGTKVLAGHFFWDFRLMAAPPYLMVTTLRNPLELFVSALQFKHRDETRTLAGATRFVTSQM 223
BLAST of mRNA_H-canaliculatus_F_contig11056.964.1 vs. uniprot
Match: D7FJ87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ87_ECTSI) HSP 1 Score: 58.2 bits (139), Expect = 4.480e-7 Identity = 32/81 (39.51%), Postives = 44/81 (54.32%), Query Frame = 1 Query: 124 ICM--QQHALIDEEVQGPFIRRQRVVAGHFTWGFQEHVHQPFVMFTTLRNPLELFVSGQQYLNRKAARHFAHAVSLVQETM 360 IC+ + H D+ + + +V+AGHF W F+ P++M TTLRNPLELFVS Q+ +R R A A V M Sbjct: 34 ICVRHEDHRPKDDNIGKWLVSGTKVLAGHFFWDFRLMAAPPYLMVTTLRNPLELFVSALQFKHRDETRTLAGATRFVTSQM 114 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11056.964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11056.964.1 >prot_H-canaliculatus_F_contig11056.964.1 ID=prot_H-canaliculatus_F_contig11056.964.1|Name=mRNA_H-canaliculatus_F_contig11056.964.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=162bp MHLWKCAGSSLRHLLRDWAEAKGQDIGIVVRCIEAVNDEGKICMQQHALIback to top mRNA from alignment at H-canaliculatus_F_contig11056:1015..3153- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11056.964.1 ID=mRNA_H-canaliculatus_F_contig11056.964.1|Name=mRNA_H-canaliculatus_F_contig11056.964.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2139bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11056:1015..3153- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11056:1015..3153- >mRNA_H-canaliculatus_F_contig11056.964.1 ID=mRNA_H-canaliculatus_F_contig11056.964.1|Name=mRNA_H-canaliculatus_F_contig11056.964.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=972bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11056:1015..3153- (Hapterophycus canaliculatus Oshoro5f female)back to top |