mRNA_H-canaliculatus_F_contig1105.957.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1105.957.1 vs. uniprot
Match: D7G385_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G385_ECTSI) HSP 1 Score: 421 bits (1081), Expect = 4.910e-138 Identity = 300/584 (51.37%), Postives = 355/584 (60.79%), Query Frame = 1 Query: 1 LAASKMFPSCPRPCPSGVVLLLSVKSGDAARTKALLRGC-----SGPDGPGLLHPDDTRDARGCTALHLAAMHGRSEIARVLLEAGASTESVVAAGENEGXXXXXXXXXXXXXXXXXXXXXXXXXTGAEDLVDRATCLHAXXXXXXXXXXXXXXXXXAKLESRAVSGQTPLRWALSMGRAGAAA-ALLEAGADPDAPDRRGACCLHAVAALKPEDXXXXXXXXGMVDKLPSSSSPASMAQLLLSAGATPNLGRGGERLHFPHAG------------------GPLSEGAGVT--GGVLEGSGGARRGVSVGETPLHLAARESSVEVAQVLLRHGADPNAKTSTEEGGMSPLHFAAAPGNDDRRRAVVRLLLQAGADVDAVSADGLTTPLKLACLNAGVVCVEELLRRGADDPTCVPRCMRPPAPPHSPLPSVS---PWCPRSRFPAAFGAAAPATAHDNLPHLRGLVGSRLPDSLRDAADCETIVGMLRKAPADRTWRRRGWLVMMYSRATAVASAAASEQGRVPPHR-WLPPAKRERILGE-GVISGGKREEQSGRGALHEVVGRLFEVTGDESVLRLVVGWL 1659 +AAS+ FPSC R C +GVVLLLSV+SGDAA+T+ALLR S D LHPD TRDARG T+LH+A++H RSEIAR+L+ AGASTESVV +G NEG T AED+VDRA XXXXXXXXXXXXXXXXX A ALLEAGADPDAPDRRGACCLH VAALK E+ SS P MAQLLLSAGA PNLGR R H G G S AG GG+ GSG S E+PLH+AARES+V VA++LL HGADPNAKT EGGMSPLH AA+ R +VR+LL AGAD+ VSADGLT+PLKLACLNA V CV+ELL GADD +CVPR P S LPS+S P CP S P + +AA N+P L GLVGSR+P S+RDAADCE IV ML +APADR WRRRGWLVM+Y+R TA + + +VPP + W+P AKR+R++G+ ++ + ++SG +VVGRLFE GD+SV+R V+ WL Sbjct: 1 MAASEPFPSCSRACSAGVVLLLSVRSGDAAKTRALLRRLPSSENSSDDRVPPLHPDATRDARGHTSLHVASIHDRSEIARLLIAAGASTESVVTSGANEGLTPLRLAAERGHLLTVRALLEAGADTTAEDVVDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEALLEAGADPDAPDRRGACCLHTVAALKSEEDGSS----AFAGTGEGSSLPGDMAQLLLSAGANPNLGRAAGRAGRIHPGRTPSSTALTLGSINQSGSGDNSSAAGAHDGGGLWSGSGSES---SASESPLHVAARESNVRVAELLLLHGADPNAKTPMREGGMSPLHCAAS-------RPIVRMLLAAGADISVVSADGLTSPLKLACLNAAVGCVKELLSWGADDLSCVPRSTPPSTLLLSSLPSISETAPPCPSS-VPLSEASAAQRI---NVPRLGGLVGSRVPASVRDAADCEEIVRMLCQAPADRAWRRRGWLVMLYARTTAAVAXXXXLREQVPPQQQWVPSAKRKRVVGKKSAVAENETSKESGAVKFRDVVGRLFEAQGDQSVVRRVIEWL 566
BLAST of mRNA_H-canaliculatus_F_contig1105.957.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 7.410e-12 Identity = 86/262 (32.82%), Postives = 121/262 (46.18%), Query Frame = 1 Query: 898 VAQVLLRHGADPNAKTSTEEGGMSPLHFAAAPGNDDRRRAVVRL---LLQAGADVDAVSADGLTTPLKLACLNAGVVCVEELLRRGADDPTCVPRCMRPPAPPHSPLPSVSPWCPRSRFPAAFGAAAPATAHDNLPHLRGLVGSRLPDSLRDA---ADCETIVGMLRKAPADRTWRRRGWLVMMYSRATAVASAAASEQGRVPPHRWLPPAKRERILGEGVISGGKREEQSGRGALH--EVVGRLFEVTGDESVLRLVVGWL 1659 V ++LL G NA+T + +PLHFA +RR A + LL+ GA+ +A D TPL +AC+++ V VE LLR GAD+ TC ++DN ++G + D AD + I ML +APADR+WRRRGWLV+ S T V A++ RV +R PAK R+ GE + GG EE + + +VG L + D + RLVVG+L Sbjct: 295 VVRLLLEAGGGVNAETGRDFLRWTPLHFAV-----ERRIASIDTTLALLEGGANTNA-HGDHSGTPLHVACMHSNVAAVELLLRWGADE-TC--------------------------------------SNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQ--IANKGSRV--NRNSCPAKVARVSGEDL--GGDEEEAENQMTVDWGGLVGSLLGLEAD-GLFRLVVGFL 504
BLAST of mRNA_H-canaliculatus_F_contig1105.957.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 7.240e-11 Identity = 79/259 (30.50%), Postives = 111/259 (42.86%), Query Frame = 1 Query: 895 EVAQVLLRHGADPNAKTSTEEGGMSPLHFAAAPGNDDRRRAVVRLLLQAGADVDAVSADGLTTPLKLACLNAGVVCVEELLRRGADDPTCVPRCMRPPAPPHSPLPSVSPWCPRSRFPAAFGAAAPATAHDNLPHLRGLVGSRLPDSLRDAADCETIVGMLRKAPADRTWRRRGWLVMMYSRATAV----ASAAASEQGRVPPHRWLPPAKRERILGEGVISGGKREEQSGRGALHEVVGRLFEVTGDESVLRLVVGWL 1659 + +VLL GAD N K T + +PLH A + LL+ GA+++A +A G TPL +AC VE LLR GAD+ P D + G++ D AD + I ML +APADR+WRRRGWLV+ S T V S+++S R+ + AK R+ G+G + E L ++VGRL + E + RLVVG+L Sbjct: 298 DAVRVLLGAGADVNVK-GTNDSCATPLHLAVNRWMTST--GTICALLEGGANINARTA-GDDTPLHIACTRLRGSVVELLLRWGADE------------------------------------KLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNS----AKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEA-EGLFRLVVGFL 511
BLAST of mRNA_H-canaliculatus_F_contig1105.957.1 vs. uniprot
Match: D7G0H9_ECTSI (Ankyrin repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0H9_ECTSI) HSP 1 Score: 72.0 bits (175), Expect = 6.350e-10 Identity = 67/213 (31.46%), Postives = 87/213 (40.85%), Query Frame = 1 Query: 856 ETPLHLAARESSVEVAQVLLRHGADPNAKTSTEEGGMSPLHFAAAPGNDDRRRAVVRLLLQAGADVDAVSADGLT-TPLKLACLNAGVVCVEELLRRGADDPTCVPRCMRPPAPPHSPLPSVSPWCPRSRFPAAFGAAAPATAHDNLPHLRGLVGSRLPDSLRDAADCETIVGMLRKAPADRTWRRRGWLVMMYSRATAVASAAASEQGRVPP 1491 E+PLH A+R +V L+ GA + + +PL AA G+ + LL +GA VDA DG+ + L AC+ CV ELLR GAD+ T D + V + +SL A D I MLR+APADR WRRRGWLVM+ +R A S R PP Sbjct: 37 ESPLHAASRAGKPDVIACLVGAGAHTEVRDRNND---TPLLLAAWLGH----ATAIAKLLASGARVDA---DGIPRSALHCACMQGHAACVSELLRGGADE----------------------------------------TVEDEDGNSPAQVIGTMSESLERAEDIVLIREMLRRAPADRAWRRRGWLVMLRNRDCVAAGLLPS--ARPPP 197
BLAST of mRNA_H-canaliculatus_F_contig1105.957.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 72.8 bits (177), Expect = 7.390e-10 Identity = 87/277 (31.41%), Postives = 111/277 (40.07%), Query Frame = 1 Query: 853 GETPLHLAAR-----ESSVEVAQVLLRHGADPNAKTSTEEGGMSPLHFAAAPGNDDRRRAVVRLLLQAGADVDAVSADGLTTPLKLACLNAGVVCVEELLRRGADDPTCVPRCMRPPAPPHSPLPSVSPWCPRSRFPAAFGAAAPATAHDNLPHLRGLVGSRLPDSLRDAADCETIVGMLRKAPADRTWRRRGWLVMMYSRATAVASAAASEQGRVPPHRWLP---PAKRERILGEGVISGGKREEQSGRGALHEVVGRLFEVTGDESVLRLVVGWL 1659 G T LH AA + +VLL GAD +AKT+ + +PLH A +R LL+ GADV+ + TPL AC + V VE LLR GAD+ G PA ++ G VGS D AD + I ML +APADR+WRRR WLV+ S T V A + G K R GE G + E L +V RL + D + RLVVG+L Sbjct: 277 GYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPST--GTIRALLEGGADVNVRDIED-RTPLHEACTYSSVAAVELLLRWGADEKL-----------------------------TDDGDVTPA----DMIGTSGDVGSDHGDI---EADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEAD-GLFRLVVGFL 513
BLAST of mRNA_H-canaliculatus_F_contig1105.957.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 2.270e-9 Identity = 130/456 (28.51%), Postives = 173/456 (37.94%), Query Frame = 1 Query: 160 RDARGCTALHLAAMHGRSEIARVLLEAG-ASTESVVAAGENEGXXXXXXXXXXXXXXXXXXXXXXXXXTGAE----DLVDRATCLHAXXXXXXXXXXXXXXXXXAKLESRAVSGQTPLRWALSMGRAGAAAALL-EAGADPDAPDRRGACCLHAVAALKPEDXXXXXXXXGMVDKLPSSSSPASMAQLLLSAGATPNLGR-GGERLHFPHAGGPLSEG-AGVTGGVLEGSGGARRGVSVGETPLHLAARESSVEVAQVLLRHGADPNAKTSTEEGGMSPLHFAAAPGNDDRRRAVVRLLLQAGADVDAVSADGLTTPLKLAC--LNAGVV-CVEELLRRGADDPTCVPRCMRPPAPPHSPLPSVSPWCPRSRFPAAFGAAA-----PATAHDNLPHLRGLVGSRLPDSLRDAADCETIVGMLRKAPADRTWRRRGWLVMMYSRATAVASAAASEQG 1479 R RG T L AA+ G ++ LL +G AS +VV+ GA+ D D LH A SR +SG+TPL A + G + LL A D DA D RG L S S + LL AGA NL GG L +S+G GV ++E G R + G T LH A +V+V LL GAD NAK G +PL D+ AVV LL + G +V+ + GL+ L L C L+ G+ V+ LLR GA + + P S + V+ +R G+A AT HD+L + + +L +APADRTWRRR WLVM+ +RA A +S G Sbjct: 65 RGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLII------AGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVA----------------------SEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHARGAQAVDV---LLDAGADVNAKACPALHGFTPLSVCVM---DNSCEAVVALLKRGG-NVNDTNCGGLSA-LHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTP-----SDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSL-----------------TKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGAPSSGSG 462
BLAST of mRNA_H-canaliculatus_F_contig1105.957.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 2.250e-8 Identity = 84/263 (31.94%), Postives = 110/263 (41.83%), Query Frame = 1 Query: 895 EVAQVLLRHGADPNAKTSTEEGGMSPLHFAAAPGNDDRRRA---VVRLLLQAGADVDAVSADGLTTPLKLACLNAGVVCVEELLRRGADDPTCVPRCMRPPAPPHSPLPSVSPWCPRSRFPAAFGAAAPATAHDNLPHLRGLVGSRLPDSLRDAADCETIVGMLRKAPADRTWRRRGWLVMMYSRATAV-----ASAAASEQGRVPPHRWLPPAKRERILGEGVISGGKREEQSGRGALHEVVGRLFEVTGDESVLRLVVGWL 1659 + +VLL G D N T+T+ +PLH A D R A +R LL+ GADVD+ + TPL +AC +A V VE LLR GAD+ R PA +R L D DA D + I ML +APADR+WRRRGWLV+ T V +S+ S G AK + GE G + E L ++V L + D S+ RLVV +L Sbjct: 61 DAVRVLLGAGVDVNVNTTTDSC-FTPLHVAV-----DGRIASDGTIRALLE-GADVDSRARHD-QTPLHIACKHASVSGVELLLRWGADEQLTNNR-----------------------------GDMPADV------IRARQQGDLDDEEHDA-DNQRICRMLTRAPADRSWRRRGWLVLSRYCPTRVQIDNGSSSRGSYNGNS--------AKVATLSGEDTGRGDEETEDRIMADLRDLVDWLVGLEAD-SLFRLVVAFL 270
BLAST of mRNA_H-canaliculatus_F_contig1105.957.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 5.270e-8 Identity = 75/260 (28.85%), Postives = 110/260 (42.31%), Query Frame = 1 Query: 895 EVAQVLLRHGADPNAKTSTEEGGMSPLHFAAAPGNDDRRRA---VVRLLLQAGADVDAVSADGLTTPLKLACLNAGVVCVEELLRRGADDPTCVPRCMRPPAPPHSPLPSVSPWCPRSRFPAAFGAAAPATAHDNLPHLRGLVGSRLPDSLRDAADCETIVGMLRKAPADRTWRRRGWLVMMYSRATAVASAAASEQGRVPPHRWLPPAKRERILGEGVISGGKREEQSGRGALH--EVVGRLFEVTGDESVLRLVVGWL 1659 + +VLL GAD +AKT+ + +PLH+A +RR A +R LL+ GA+V+A TPL +AC + V VE LL GAD+ + L +P A + + P + G AD I ML +APADR+W RR WLV+ S T V + S + E + GG +E + ++ ++V RL + D + RLVVG+L Sbjct: 39 DTVRVLLEAGADVDAKTTGDGNCATPLHYAV-----NRRIAPIGAIRALLEGGANVNARDVFD-QTPLHVACARSSVNGVEFLLHWGADEKL-------------TDLDGETP-----------AGAIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVLSRSCPTKVQISNTSSSSNISSGSSGDGLSAEMVSVNCKDLGGDDKETEDQKTVNWRDLVVRLVGLEAD-VLFRLVVGFL 267
BLAST of mRNA_H-canaliculatus_F_contig1105.957.1 vs. uniprot
Match: A0A3D3P0W7_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3D3P0W7_9BACT) HSP 1 Score: 64.7 bits (156), Expect = 6.770e-8 Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 841 GVSVGETPLHLAARESSVEVAQVLLRHGADPNAKTSTEEGGMSPLHFAAAPGNDDRRRAVVRLLLQAGADVDAVSADGLTTPLKLACLNAGVVCVEELLRRGAD 1152 G VG T L AAR +SV+V ++LL G A+T T++ G S LH+A A D + A VR+L+ AGAD++A G TTPL A + V ELL+RGAD Sbjct: 136 GNQVGYTALMGAARGASVDVLRLLLSRGG--RART-TDKRGCSALHWAVAQSGDSSQTACVRVLIDAGADINARDEGG-TTPLMNAAWFGCMDAVRELLQRGAD 235
BLAST of mRNA_H-canaliculatus_F_contig1105.957.1 vs. uniprot
Match: D7FY50_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY50_ECTSI) HSP 1 Score: 64.7 bits (156), Expect = 2.200e-7 Identity = 49/163 (30.06%), Postives = 70/163 (42.94%), Query Frame = 1 Query: 952 EEGGMSPLHFAAAPGNDDRRRAVVRLLLQAGADVDAVSADGLTTPLKLACLNAGVVCVEELLRRGADDPTCVPRCMRPPAPPHSPLPSVSPWCPRSRFPAAFGAAAPATAHDNLPHLRGLVGSRLPDSLRDAADCETIVGMLRKAPADRTWRRRGWLVMMYSR 1440 ++ G+S L AA G+ + +L+ AGADVD + + + TPL LAC++ CV LLR AD+ +++L +VG + RD E I ML +APADR WRRRGWL M+ +R Sbjct: 234 DDRGVSALGIAARKGHAK----ALDVLIDAGADVDEANQE-MDTPLHLACMHLQPACVRTLLRHNADE---------------------------------------VFRNEDLAFPDDVVGHAVAGDKRDEEVVEWIYEMLARAPADRVWRRRGWLAMLRAR 352 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1105.957.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1105.957.1 >prot_H-canaliculatus_F_contig1105.957.1 ID=prot_H-canaliculatus_F_contig1105.957.1|Name=mRNA_H-canaliculatus_F_contig1105.957.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=549bp MFPSCPRPCPSGVVLLLSVKSGDAARTKALLRGCSGPDGPGLLHPDDTRDback to top mRNA from alignment at H-canaliculatus_F_contig1105:618..2279- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1105.957.1 ID=mRNA_H-canaliculatus_F_contig1105.957.1|Name=mRNA_H-canaliculatus_F_contig1105.957.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1662bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1105:618..2279- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1105:618..2279- >mRNA_H-canaliculatus_F_contig1105.957.1 ID=mRNA_H-canaliculatus_F_contig1105.957.1|Name=mRNA_H-canaliculatus_F_contig1105.957.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3294bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1105:618..2279- (Hapterophycus canaliculatus Oshoro5f female)back to top |