mRNA_H-canaliculatus_F_contig11.919.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: A0A6H5JNN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN8_9PHAE) HSP 1 Score: 439 bits (1128), Expect = 1.130e-144 Identity = 333/451 (73.84%), Postives = 351/451 (77.83%), Query Frame = 1
Query: 862 MSLPRPGGNQQG-DSKSGAYGGGTTAAT--------------PSAFVGYNPPSSNPPNPGGNPAGPGGFSLSGAAGSXXXXXXAVGYXXXXXXXXAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALXXXMXAVAGAAMGMGAGGAQXXXXXXXXXXXXXXXXXXXQPLDWHQWTPDGVNAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYFMASLPPPPIPSLTPPVHCPCLSTYYVSSPFKTMAHTVPTGSASREIMILG 2169
MSLPRPGG QG + KSG PSAF GY PPS+NPPNP S +GA+ XXXXXX XXXX XXX XX X XXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L M AVAGAAMGM AGGAQ XXXXXXXXXXXXXXX QPLDWHQWTPDG+NAQMLN GG+VASNFLKSNVAQYQPRVSG+WNTLKVYFTVDNRYVLKKLKVLLLSVL+KDW+RLPSEDEVKDD GRPKFERPVADVNAPDLYVPLMSFITFVL+TGYAKGSAAA S GAGTFSPEVLTEVTSSC+VTQLLEVLL+RLGLYL+NSPAVVLDLIAYTGYKYVGLCINMT+G+FSG+T YYLALLWTGSM S+FM FKTMAHTVPTGSASRE+MILG
Sbjct: 1 MSLPRPGGRPQGGEIKSGXXXXXXXXXXXXXXXXXXXXXXXXPSAFAGYTPPSANPPNPY--------TSATGASXXXXXXXXXXXXXXXXYXXXXXXXGXAFXXXXXPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTLGASMGAVAGAAMGMAAGGAQRKAXXXXXXXXXXXXXXX-QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLRKDWFRLPSEDEVKDD-GRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLIAYTGYKYVGLCINMTVGVFSGRTWYYLALLWTGSMMSFFM----------------------------FKTMAHTVPTGSASREVMILG 413
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: D7FLH1_ECTSI (Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH1_ECTSI) HSP 1 Score: 430 bits (1105), Expect = 4.030e-143 Identity = 218/264 (82.58%), Postives = 231/264 (87.50%), Query Frame = 1
Query: 1378 QPLDWHQWTPDGVNAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYFMASLPPPPIPSLTPPVHCPCLSTYYVSSPFKTMAHTVPTGSASREIMILG 2169
QPLDWHQWTPDG+NAQMLN GG+VASNFLKSNVAQYQPRVSG+WNTLKVYFTVDNRYVLKKLKVLLLSVLKKDW+RLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVL+TGYAKGSAAA S GAGTFSPEVLTEVTSSC+VTQLLEVLL+RLGLYL+NSPAVVLDL+AYTGYKYVGLCINMT+G+FSGKT YYLALLWTGSM S+FM FKTMAHTVPTGSASRE+MILG
Sbjct: 52 QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYKYVGLCINMTVGVFSGKTWYYLALLWTGSMMSFFM----------------------------FKTMAHTVPTGSASREVMILG 287
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: A0A835YSN9_9STRA (Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN9_9STRA) HSP 1 Score: 247 bits (630), Expect = 1.940e-73 Identity = 134/250 (53.60%), Postives = 169/250 (67.60%), Query Frame = 1
Query: 1426 MLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDE--VKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYFMASLPPPPIPSLTPPVHCPCLSTYYVSSPFKTMAHTVPTGSASREIMILG 2169
MLN GG++A +F+ SN+A+YQP VSGFW LK YF VDN YVL+K KVLLL VLKK W+R+P+E+ +D + KF RP D NAPDLY+PLM+FIT L++G+ KG A+ F+PEVL EVTSS +V QLLEVLLVRLGLYL+ +PA +LDL+A+TGYK+V LCINM +GI G+T YY+AL++TG MT+YFM KTMA VP G ASR++MI G
Sbjct: 1 MLNMGGTMAKSFISSNMARYQPGVSGFWALLKHYFAVDNAYVLRKFKVLLLPVLKKSWHRVPAEEAGAAQDGSAQFKFARPCVDENAPDLYLPLMAFITHALISGFVKGRAS-------NFTPEVLVEVTSSAMVVQLLEVLLVRLGLYLLGAPAAMLDLVAFTGYKFVALCINMAVGIALGRTGYYVALVYTGLMTAYFM----------------------------LKTMACAVPLGPASRDVMIAG 215
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: W7TGL4_9STRA (Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGL4_9STRA) HSP 1 Score: 175 bits (443), Expect = 8.640e-45 Identity = 93/218 (42.66%), Postives = 133/218 (61.01%), Query Frame = 1
Query: 1414 VNAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQG----------------RPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYF 2019
N+Q + G + +L ++V++Y P V+ W+ LK YF V++ YV +KL L+ K+ W R + G RP+++ P+ D NAPDLY+PLM+F+T+VLVTGYAKG+ +F+PEVL EVTSSC+V QLLE+ ++RLGLYL+ +PA +LDL+A TGYKYV L NM LG+ G Y A+++TG +YF
Sbjct: 105 ANSQAFSMGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTK-------NSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYF 315
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: A0A7S2LHT7_9STRA (Protein YIF1 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LHT7_9STRA) HSP 1 Score: 167 bits (423), Expect = 2.770e-42 Identity = 101/272 (37.13%), Postives = 139/272 (51.10%), Query Frame = 1
Query: 1378 QPLDWHQWTPDGVNAQM-----LNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYFMASLPPPPIPSLTPPVHCPCLSTYYVSSPFKTMAHTVP----TGSASREIMIL 2166
QP W P +N+ M +N FL + A+ P + TL+ YF VDN YVL K++ +L LKKDW RL +E G K+ P D NAPDLY+P MS +T+VL+ GS G F+PE L E+T+ C VTQ+LEVL +RLG Y++ P +LD+ +TGYKY+GLC+NM +G+F G YY + WT S T++FM +TMA+ VP T RE+M++
Sbjct: 110 QPEQPQLWNPANINSMMKNDMVMNMAYDGGKAFLANGAARMIPGLELLMVTLRYYFAVDNSYVLHKMQRVLFPFLKKDWKRLEAEGH-----GNVKYALPRFDENAPDLYIPFMSLVTYVLLCALLFGSK-------GQFTPEALPEITTRCFVTQILEVLAIRLGHYVMQVPCSLLDMFCFTGYKYMGLCVNMLVGLFFGYWPYYGTMTWTASATAFFM----------------------------LRTMANNVPRITATNGPKREVMVM 341
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: A0A7R9Z3B1_9STRA (Protein YIF1 n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z3B1_9STRA) HSP 1 Score: 160 bits (405), Expect = 6.250e-41 Identity = 103/260 (39.62%), Postives = 136/260 (52.31%), Query Frame = 1
Query: 1417 NAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTA-----YYLALLWTGSMTSYFMASLPPPPIPSLTPPVHCPCLSTYYVSSPFKTMAHTVPTGSAS----REIMILG 2169
N ML+ G V S+FL A+ P + F TL+VYF VDNRYV +K++ +L L KDW RL ED+ + PV D NA DLY+P M+ IT+VL+ G+A G F+PEVL +VT+ C TQ+LEV+ VR G Y + +P +LDL + TGYKY+GL INM +G+ G YY LWT S SYFM KTMA+ +P +A+ RE M+LG
Sbjct: 20 NDAMLDGGAKVVSHFLDQGTARLVPGLDLFMRTLRVYFAVDNRYVKRKMQRVLFPFLYKDWARL--EDDASSTATSIAYAPPVQDENAFDLYIPSMALITYVLLCALCYGTA-------GEFNPEVLPDVTTKCFATQILEVIAVRGGYYAMQAPCSLLDLFSATGYKYLGLSINMLVGLLLGHLGWGHRGYYGTFLWTASAASYFM----------------------------LKTMANNIPRMTAATGPKREFMVLG 242
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: A0A7S2UL83_9STRA (Protein YIF1 n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UL83_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.580e-39 Identity = 93/219 (42.47%), Postives = 123/219 (56.16%), Query Frame = 1
Query: 1417 NAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIF-----SGKTAYYLALLWTGSMTSYFMASLPPPPIPSLT 2058
N ++ S SN + S AQ P + NTL+ YF VDNRYV KK+ +L L K W R+ +E Q R FE P+ D NAPDLY+P M+ IT+VL+ GSA G F PEV+ +V + C TQ++EVL++R GL+ + +P +LDL +YTGYKY+GLCINM G+ G YY LWT S S+FM IP +T
Sbjct: 129 NDALMKMAESAGSNMMTSGWAQMVPGMDRAMNTLRFYFAVDNRYVKKKIIRILFPFLSKQWKRMEAEPTGPQMQSR--FELPIVDDNAPDLYLPCMTLITYVLLCALCYGSA-------GKFDPEVIPDVCTKCFFTQVMEVLVMRAGLWAMQAPIPMLDLFSYTGYKYLGLCINMLAGLALLHFGKGVAGYYGTFLWTASAASFFMLKTMANNIPRIT 338
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: B7GAF9_PHATC (Protein YIF1 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAF9_PHATC) HSP 1 Score: 159 bits (402), Expect = 2.520e-39 Identity = 98/260 (37.69%), Postives = 136/260 (52.31%), Query Frame = 1
Query: 1417 NAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKT------AYYLALLWTGSMTSYFMASLPPPPIPSLTPPVHCPCLSTYYVSSPFKTMAHTVPTGSAS----REIMIL 2166
N ML+ S +FL+S A+ P + TL+ YF VDN+YVL+K++ +L L K W R E D + ++ P D NAPDLYVP+MS IT+VL+ G A G F+PEVL +VT+ C +TQ+LEVL +R G Y + P LDL AYTGYKY+GL +NM + + G AYY+ L WT S ++FM KTMAH +P+ +A+ REI+++
Sbjct: 129 NDTMLDLASSAGKSFLQSGSARMIPGLESTMLTLRHYFAVDNKYVLRKMQKVLFPFLSKQWQRQEREPGTPDTPAQ--YDLPYLDENAPDLYVPVMSLITYVLLCAVCYGKA-------GQFNPEVLPDVTTKCFMTQVLEVLAIRFGFYTMQVPVPFLDLFAYTGYKYLGLALNMLVALVLGTVFALGTRAYYVTLFWTASAMAFFM----------------------------LKTMAHNIPSRTAATGPKREIVVI 351
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: A0A7S1TS60_9STRA (Protein YIF1 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TS60_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.040e-38 Identity = 84/203 (41.38%), Postives = 117/203 (57.64%), Query Frame = 1
Query: 1411 GVNAQMLNAGGSVASNFLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYF 2019
G + M+N G + A F + P + F+ +LK YF+V+N YVL+KL +L++ KK W R S+D KF RP+ D NAPDLY+PLM+ +TFVLVTG+ KG+ G FSP+VL V +SC VT +L +L++ GL+ LDL AYTGYKY LC+ + + G YY+ALL+ + YF
Sbjct: 42 GFDPGMVNMGANAAGQFFNGQMQNVSPAAATFYRSLKYYFSVNNSYVLRKLGILIMPWNKKRWARETSDDG----DVNKKFARPLHDENAPDLYIPLMALVTFVLVTGFVKGTG-------GEFSPDVLQNVLTSCAVTDVLLMLIMYGGLFFTQLSVPTLDLYAYTGYKYFALCVVTLVSLILGSLGYYVALLYMAAALGYF 233
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Match: G4YM91_PHYSP (Protein YIF1 n=2 Tax=Phytophthora TaxID=4783 RepID=G4YM91_PHYSP) HSP 1 Score: 155 bits (393), Expect = 6.410e-38 Identity = 85/210 (40.48%), Postives = 128/210 (60.95%), Query Frame = 1
Query: 1405 PDGVNAQMLNAGGSVASN----FLKSNVAQYQPRVSGFWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWYRLPSEDEVKDDQGRP-KFERPVADVNAPDLYVPLMSFITFVLVTGYAKGSAAAQSHGAGTFSPEVLTEVTSSCVVTQLLEVLLVRLGLYLINSPAVVLDLIAYTGYKYVGLCINMTLGIFSGKTAYYLALLWTGSMTSYF 2019
PD +N N +A N FL+ Y P G W +LK YFTV+N YV +LK+LLL K+W R+ + ++ D+ +P ++ P D NAPDLY+PLM F+T++L+ GY+KG++ FSP+V+T+ S C+V QL+E+ ++ LY++NS LDL++++GYKY+ L IN + G AYY++LL+TG SYF
Sbjct: 144 PDFINQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGVWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRMGNGEQ---DESKPMQYAPPTRDCNAPDLYIPLMGFLTYILIVGYSKGTS-------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINTVVFQLLGSIAYYVSLLYTGVAVSYF 343 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11.919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11.919.1 >prot_H-canaliculatus_F_contig11.919.1 ID=prot_H-canaliculatus_F_contig11.919.1|Name=mRNA_H-canaliculatus_F_contig11.919.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=437bp MSLPRPGGNQQGDSKSGAYGGGTTAATPSAFVGYNPPSSNPPNPGGNPAGback to top mRNA from alignment at H-canaliculatus_F_contig11:70718..75367+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11.919.1 ID=mRNA_H-canaliculatus_F_contig11.919.1|Name=mRNA_H-canaliculatus_F_contig11.919.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4650bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11:70718..75367+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11:70718..75367+ >mRNA_H-canaliculatus_F_contig11.919.1 ID=mRNA_H-canaliculatus_F_contig11.919.1|Name=mRNA_H-canaliculatus_F_contig11.919.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2622bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11:70718..75367+ (Hapterophycus canaliculatus Oshoro5f female)back to top |