mRNA_H-canaliculatus_F_contig11.914.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11.914.1 vs. uniprot
Match: D7FLH8_ECTSI (FAM184 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH8_ECTSI) HSP 1 Score: 438 bits (1126), Expect = 2.960e-137 Identity = 371/577 (64.30%), Postives = 427/577 (74.00%), Query Frame = 1
Query: 1 FELEEVNTNHQKEMQDILSDAANKIKRFKEQLASKQGQLNTEAQMEKLRQAHAKEKKEALAEFRSFKRNAKAREESIQIDCNEQTSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNSMITEQLIAQEDIRQAAAAEVKEEKRVFEQGIGRLRAELAGDKEAALSALRRESDEELQATRKSFTEKLERALLDCARSRTACAEEKEKSNSLKDELERLGREVSRLRENAAAVAETSRLEEASLRRLLESASAEGRRLVKALERAEAARDEALAVGRGAGGEAEGLRERLRREKDEKEAFEKGAAAEIALKDGEIATCLGEIASLRQKLDGAIVDGKRATHKLDLELAEVREKAQRMLNRANETGEKLRVSREEAERAVGEGKNGVADLQRQLELQKRQAAAAQASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRELTERAKEREEELLRQLGEESSRFEVALEAERSTRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGAFQKELDEKSKSFDQEK 1731
FELEEVNTNHQ+EMQDILSDAANKIKRFKEQLASKQGQL+ EAQ+EKLRQAHAKEKKEALAEFR+FKRNAKAREESIQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FN+MIT+QL+AQE+IR+AA E K K+ F Q +GRLRAELAGDKEAALSALRRE DEEL+ATRKS TEK+ERAL D +SR CAEEK+++ SLK + ERL E+++LR+NA A+ ETSRLEEASLRRLLE+A+AEGRRL KALE+ EAARDEALAVGRGAGGEAEGLR+RL RE+ EKEAFE+ A AEIA KDGEIA +LRQKLDGA+ GK AT KL+ EL + +E +R R ET + LR S ++AER GEGK V +LQRQLE K+ AAAA+AS REL E++K +EEEL+RQLGEE+ RFE AL+ +R++R A XXXXXXXXXXXXXXX +V FQ+ELDE+ ++ D+EK
Sbjct: 107 FELEEVNTNHQQEMQDILSDAANKIKRFKEQLASKQGQLDMEAQVEKLRQAHAKEKKEALAEFRTFKRNAKAREESIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFNTMITDQLMAQEEIRRAAEMEAKGAKQEFGQQVGRLRAELAGDKEAALSALRREGDEELKATRKSLTEKMERALADATQSRAVCAEEKKRNASLKADRERLNGEITKLRDNATAMVETSRLEEASLRRLLETAAAEGRRLTKALEQMEAARDEALAVGRGAGGEAEGLRDRLTRERKEKEAFERSATAEIASKDGEIAARXXXXXALRQKLDGALGYGKEATQKLERELTKAQEDVRRASLRVAETEKSLRASMDDAERTRGEGKRSVDELQRQLEFTKQHAAAAEASLRSAMEKELDDARQKLLEAKRQAEKDLEEAQQTSAGGARELMEKSKRKEEELMRQLGEEARRFETALKEDRASRVAEAGENSAKLEALRQXXXXXXXXXXXXXXXGGQEADREISRLRAQVEDFQRELDERKRAHDKEK 683
BLAST of mRNA_H-canaliculatus_F_contig11.914.1 vs. uniprot
Match: A0A6H5KR93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR93_9PHAE) HSP 1 Score: 379 bits (973), Expect = 8.540e-115 Identity = 323/547 (59.05%), Postives = 369/547 (67.46%), Query Frame = 1
Query: 43 QDILSDAANKIKRFKEQLASKQGQLNTEAQMEKLRQAHAKEKKEALAEFRSFKRNAKAREESIQIDCNEQTSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------FNSMITEQLIAQEDIRQAAAAEVKEEKRVFEQGIGRLRAELAGDKEAALSALRRESDEELQATRKSFTEKLERALLDCARSRTACAEEKEKSNSLKDELERLGREVSRLRENAAAVAETSRLEEASLRRLLESASAEGRRLVKALERAEAARDEALAVGRGAGGEAEGLRERLRREKDEKEAFEKGAAAEIALKDGEIATCLGEIASLRQKLDGAIVDGKRATHKLDLELAEVREKAQRMLNRANETGEKLRVSREEAERAVGEGKNGVADLQRQ-LELQKRQAAAAQASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRELTERAKEREEELLRQLGEESSRFEVALEAERSTRAA 1542
QDILSDAANKIKRFKE+LASKQGQL+ EAQ++KLRQAHAKEK+EALAEFR+FKRNAKAREESI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FN+MIT+QL+AQEDIR+AA E K K+ FEQ +GRLRAELAGDKEAALSALRRESDEEL+ATRKS TEKLERAL D +SR CAEEK+++ SLK + ERL E+ +LRENA A+ ETSRLEEASLRRLLE+A+AEGRRL KALE+ EAARDEALAVGRGAGGEAEGLRERL RE+ EKEAFE+ A AEIA KDGE +LR+KLDGA+ GK AT KL EL + +E +R R ET ++LR S ++AER GEGK V +LQRQ LE K+ AAAA+AS REL E++K +EEEL+RQLGEE+ FE ALE ER++R A
Sbjct: 73 QDILSDAANKIKRFKEKLASKQGQLDMEAQVDKLRQAHAKEKEEALAEFRTFKRNAKAREESIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARRRRSVREGGCLQCLTETNQVDFPDRYCVPRRLLISKCFGLKVELEEAVRKGNEKFNTMITDQLMAQEDIRRAAEMEAKGAKQEFEQQVGRLRAELAGDKEAALSALRRESDEELKATRKSLTEKLERALADATQSRAVCAEEKKRNASLKADRERLNGEIIKLRENATAMVETSRLEEASLRRLLENAAAEGRRLTKALEQTEAARDEALAVGRGAGGEAEGLRERLARERKEKEAFERSAVAEIASKDGEXXXXXXXXXALRKKLDGALGYGKEATEKLKEELTKAQEDVRRASLRVAETEKRLRDSLDDAERTRGEGKRTVNELQRQGLEYTKQHAAAAEASLRSTMDKELDNAQQKLLGAKRQAEKDLEEAQQASAGGARELMEKSKRKEEELMRQLGEEARHFEAALERERASRVA 619
BLAST of mRNA_H-canaliculatus_F_contig11.914.1 vs. uniprot
Match: A0A835ZEA9_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA9_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.360e-12 Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 1
Query: 1 FELEEVNTNHQKEMQDILSDAANKIKRFKEQLASKQGQLNTEAQMEKLRQAHAKEKKEALAEFRSFKRNAKAREESI 231
FELEEV NHQKEMQDIL+DAA+KI+RFKE L SK+ + N A+ L + H +EK+EALAEF++F+R K RE ++
Sbjct: 46 FELEEVRANHQKEMQDILTDAASKIQRFKESLESKREEANAAARAATLVEKHEREKREALAEFKTFQRGVKERERAL 122 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11.914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11.914.1 >prot_H-canaliculatus_F_contig11.914.1 ID=prot_H-canaliculatus_F_contig11.914.1|Name=mRNA_H-canaliculatus_F_contig11.914.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=577bp FELEEVNTNHQKEMQDILSDAANKIKRFKEQLASKQGQLNTEAQMEKLRQback to top mRNA from alignment at H-canaliculatus_F_contig11:587..8831- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11.914.1 ID=mRNA_H-canaliculatus_F_contig11.914.1|Name=mRNA_H-canaliculatus_F_contig11.914.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8245bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11:587..8831- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11:587..8831- >mRNA_H-canaliculatus_F_contig11.914.1 ID=mRNA_H-canaliculatus_F_contig11.914.1|Name=mRNA_H-canaliculatus_F_contig11.914.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3462bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11:587..8831- (Hapterophycus canaliculatus Oshoro5f female)back to top |