mRNA_H-canaliculatus_F_contig10998.912.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10998.912.1 vs. uniprot
Match: A0A6H5KJL4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJL4_9PHAE) HSP 1 Score: 179 bits (453), Expect = 2.130e-46 Identity = 99/118 (83.90%), Postives = 103/118 (87.29%), Query Frame = 3 Query: 831 SANSLRLQVTHISRVGGNLQIRKEDVRANVFKPTVALPTMTVEEFGAIELERV--RNQQEAP--KDPSSTRRRYDQLEMDGDEDDEDLVEQAAQYDREWDDWKAENPRGSGNKANKII 1172 S S L+VTHISRVGGNLQIRKEDVRA+VFKPTVALPTMTVEEFG IELER R QQEA KD SSTRRRYDQLEMDGDEDDEDLVEQAA +DR WDDWKAENPRG+GNKANKII Sbjct: 247 SIRSNGLEVTHISRVGGNLQIRKEDVRADVFKPTVALPTMTVEEFGEIELERATERTQQEAAAQKDSSSTRRRYDQLEMDGDEDDEDLVEQAAYHDRAWDDWKAENPRGAGNKANKII 364
BLAST of mRNA_H-canaliculatus_F_contig10998.912.1 vs. uniprot
Match: A0A7S2BMW3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BMW3_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.210e-21 Identity = 58/114 (50.88%), Postives = 78/114 (68.42%), Query Frame = 3 Query: 849 LQVTHISRVG-GNLQIRKEDVRANVFKPTVALPTMTVEEFGAIEL-------ERVRNQQEAPKDPSSTRRRYDQLEMDGDEDDEDLVEQAAQYDREWDDWKAENPRGSGNKANK 1166 LQVTH++R G G L +R+ED++A VF+P LPTMT++E IE+ ER + + PK P RR +QLE DG+ED+ +LV+QAA DREWD+W+ ENPRG GNKA + Sbjct: 7 LQVTHLNRDGQGGLAMRREDIKAGVFRPGHILPTMTLDELADIEIAAAIERGERAKAAELEPKGP----RRIEQLERDGEEDNAELVDQAAYKDREWDEWREENPRGCGNKAGE 116
BLAST of mRNA_H-canaliculatus_F_contig10998.912.1 vs. uniprot
Match: A0A835ZK81_9STRA (TAP42-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK81_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.420e-19 Identity = 51/106 (48.11%), Postives = 76/106 (71.70%), Query Frame = 3 Query: 849 LQVTHISRVGGNLQIRKEDVRANVFKPTVALPTMTVEEFGAIELERVRNQQEAPKDPSSTRRRYDQLEMDGDEDDEDLVEQAAQYDREWDDWKAENPRGSGNKANK 1166 L+VTH+S+V G LQ++KE VRA VF+PT+A PTM++EE+ E+ + E K+ RR++QL DG++D+ +L+++A DREWD WK ++P+G GNKANK Sbjct: 268 LEVTHVSKVNGQLQMQKELVRARVFQPTIAPPTMSLEEYADREVAEAMERAEREKNAPQPDRRFEQLVADGEDDNVELLDKATIKDREWDAWKEDHPKGYGNKANK 373
BLAST of mRNA_H-canaliculatus_F_contig10998.912.1 vs. uniprot
Match: A0A7S1ZD37_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZD37_TRICV) HSP 1 Score: 89.4 bits (220), Expect = 2.720e-17 Identity = 52/109 (47.71%), Postives = 73/109 (66.97%), Query Frame = 3 Query: 849 LQVTHISR--VGGNLQIRKEDVRANVFKPTVALPTMTVEEFGAIE----LERVRNQQEAPKDPSSTRRRYDQLEMDGDEDDEDLVEQAAQYDREWDDWKAENPRGSGNK 1157 LQ+T +++ G L+ +KE+VR+ VF+P PTM++ E+G E +ER Q+ A + RRY+QL DG ED+ DLV+++A+ DREWDDWK ENPRGSGNK Sbjct: 24 LQLTRVTQDPATGQLRFKKEEVRSQVFRPGWNQPTMSLAEYGDREVARAIEREEKQKRAEAENKLKPRRYEQLLKDGMEDNADLVDKSAKLDREWDDWKDENPRGSGNK 132
BLAST of mRNA_H-canaliculatus_F_contig10998.912.1 vs. uniprot
Match: A0A448ZBY0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBY0_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 5.670e-17 Identity = 54/115 (46.96%), Postives = 77/115 (66.96%), Query Frame = 3 Query: 831 SANSLRLQVTHISR--VGGNLQIRKEDVRANVFKPTVALPTMTVEEFGAIE----LERVRNQQEAPKDPSSTRRRYDQLEMDGDEDDEDLVEQAAQYDREWDDWKAENPRGSGNK 1157 S+++ L+VTH+S+ G L+ ++E++R+ VF+P + PTMT+EE G E +ER Q A + RRY+QL DG ED+ DLV+ +A+ DREWDDWK ENP+GSGNK Sbjct: 260 SSSNKGLKVTHVSKDAASGQLRFKREEIRSKVFQPGWSQPTMTLEELGEREYQEAVEREARQNAAEAERVKQPRRYEQLANDGLEDNADLVDASAKLDREWDDWKDENPKGSGNK 374
BLAST of mRNA_H-canaliculatus_F_contig10998.912.1 vs. uniprot
Match: A0A7R9ZBN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBN3_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.940e-16 Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 3 Query: 834 ANSLRLQVTHISR--VGGNLQIRKEDVRANVFKPTVALPTMTVEEFGAIEL----ERVRNQQEAPKDPSSTRRRYDQLEMDGDEDDEDLVEQAAQYDREWDDWKAENPRGSGNK 1157 +N +QVT +++ + G L +++E++++ VF+P PTMT+ E+G E+ ER Q+ A ++ RRY+QL DG EDD LV+ +A+ DR+WDDWK ENPRGSGNK Sbjct: 68 SNGKGMQVTRVTQDPITGQLLMKREEIKSQVFRPGWNQPTMTLAEYGDREVTMAKEREARQKAAEEEKKGQPRRYEQLVRDGLEDDAKLVDASAKLDRDWDDWKDENPRGSGNK 181
BLAST of mRNA_H-canaliculatus_F_contig10998.912.1 vs. uniprot
Match: B7FS86_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FS86_PHATC) HSP 1 Score: 92.8 bits (229), Expect = 2.000e-16 Identity = 56/116 (48.28%), Postives = 75/116 (64.66%), Query Frame = 3 Query: 837 NSLRLQVTHISRVG-GNLQIRKEDVRANVFKPTVALPTMTVEEFGAIELERVRN----QQEAPKDPSSTRRRYDQLEMDGDEDDEDLVEQAAQYDREWDDWKAENPRGSGNKANKI 1169 +S L+VTHI++ G LQIRKED+++ VF+P PTM++EE +E+E+ Q EA + RR+DQL DG EDD +LVE +A DR WD+WK ENPRGSGNK + Sbjct: 271 SSYPLKVTHITKDNSGQLQIRKEDIKSQVFRPGWNQPTMSLEELAEMEVEQAMERDVKQTEAQILNARAPRRFDQLVKDGLEDDMELVEASAALDRNWDNWKDENPRGSGNKRGDV 386
BLAST of mRNA_H-canaliculatus_F_contig10998.912.1 vs. uniprot
Match: A0A7S4HLI0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HLI0_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 5.520e-16 Identity = 52/113 (46.02%), Postives = 76/113 (67.26%), Query Frame = 3 Query: 837 NSLRLQVTHISR--VGGNLQIRKEDVRANVFKPTVALPTMTVEEFGAIE----LERVRNQQEAPKDPSSTRRRYDQLEMDGDEDDEDLVEQAAQYDREWDDWKAENPRGSGNK 1157 N +QVT +++ V G LQ++KE++++ VF+P PTM++ E+G E +ER Q+ A ++ RRY+QL DG EDD +LV+ +A+ DR+WDDWK ENPRGSGNK Sbjct: 284 NGRGMQVTRVTQDPVTGQLQLKKEEIKSQVFRPGWNQPTMSLAEYGDREVTQAIEREARQKVAEEENKGKPRRYEQLVRDGMEDDANLVDASAKLDRDWDDWKDENPRGSGNK 396
BLAST of mRNA_H-canaliculatus_F_contig10998.912.1 vs. uniprot
Match: A0A1E7ETV7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETV7_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.020e-15 Identity = 51/109 (46.79%), Postives = 74/109 (67.89%), Query Frame = 3 Query: 849 LQVTHISR--VGGNLQIRKEDVRANVFKPTVALPTMTVEEFGAIE----LERVRNQQEAPKDPSSTRRRYDQLEMDGDEDDEDLVEQAAQYDREWDDWKAENPRGSGNK 1157 LQ+THI++ G LQ +++++R+ VF+P A PTM++EE G E +ER Q++A + +RYD L DG ED+ +LVE +A+ DR+WDDWK +NPRGSGNK Sbjct: 262 LQLTHITQNATTGELQFKRDEIRSKVFQPGWAQPTMSLEELGDREYKEAMERGARQKQAEAEQIHQPKRYDDLVRDGMEDNHELVEASAELDRKWDDWKDQNPRGSGNK 370
BLAST of mRNA_H-canaliculatus_F_contig10998.912.1 vs. uniprot
Match: A0A7S0GIF8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GIF8_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.110e-15 Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 3 Query: 849 LQVTHISR--VGGNLQIRKEDVRANVFKPTVALPTMTVEEFGAIE----LERVRNQQEAPKDPSSTRRRYDQLEMDGDEDDEDLVEQAAQYDREWDDWKAENPRGSGNKANK 1166 +QVT +++ G L ++E++R NVF+P PTMT+ E G IE +ER + Q+E + RRYDQLE DG ED DL + +++ DR+WDD+K +NPRG GNK ++ Sbjct: 1 MQVTKVTQDPKTGQLHFKREEIRTNVFRPHWNQPTMTLNELGDIEVADAMERAQKQKEEEAAALNRPRRYDQLERDGMEDCADLADASSKLDRDWDDFKDDNPRGIGNKLSE 112 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10998.912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10998.912.1 >prot_H-canaliculatus_F_contig10998.912.1 ID=prot_H-canaliculatus_F_contig10998.912.1|Name=mRNA_H-canaliculatus_F_contig10998.912.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=139bp MPGASLVPKRPHDCFSPTFACAYLSANSLRLQVTHISRVGGNLQIRKEDVback to top mRNA from alignment at H-canaliculatus_F_contig10998:1718..4482- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10998.912.1 ID=mRNA_H-canaliculatus_F_contig10998.912.1|Name=mRNA_H-canaliculatus_F_contig10998.912.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2765bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10998:1718..4482- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10998:1718..4482- >mRNA_H-canaliculatus_F_contig10998.912.1 ID=mRNA_H-canaliculatus_F_contig10998.912.1|Name=mRNA_H-canaliculatus_F_contig10998.912.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=834bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10998:1718..4482- (Hapterophycus canaliculatus Oshoro5f female)back to top |