mRNA_H-canaliculatus_F_contig10986.904.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10986.904.1
Unique NamemRNA_H-canaliculatus_F_contig10986.904.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10986.904.1 vs. uniprot
Match: K9L3B1_MAGMU (ATP synthase subunit 9, mitochondrial n=1 Tax=Magnusiomyces magnusii TaxID=43963 RepID=K9L3B1_MAGMU)

HSP 1 Score: 132 bits (331), Expect = 9.660e-39
Identity = 73/77 (94.81%), Postives = 74/77 (96.10%), Query Frame = 1 
Query:    1 MNNIVLAGKYIGSGIATIGLAGAGVGIAIVFAALINGTSRNPQLRSTLFQFAILGFALSEATGLFCLMISFLLLYAV 231
            MNNIVL GKYIGSGIATIGLAGAGVGIAIVFAALINGTSRNPQLR  LFQ+AILGFALSEATGLFCLMISFLLLYAV
Sbjct:    1 MNNIVLLGKYIGSGIATIGLAGAGVGIAIVFAALINGTSRNPQLRGQLFQYAILGFALSEATGLFCLMISFLLLYAV 77
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BLAST of mRNA_H-canaliculatus_F_contig10986.904.1 vs. uniprot
Match: A0A023UNF4_9ASCO (ATP synthase subunit 9, mitochondrial n=4 Tax=Dipodascaceae TaxID=34353 RepID=A0A023UNF4_9ASCO)

HSP 1 Score: 126 bits (317), Expect = 1.320e-36
Identity = 67/77 (87.01%), Postives = 76/77 (98.70%), Query Frame = 1 
Query:    1 MNNIVLAGKYIGSGIATIGLAGAGVGIAIVFAALINGTSRNPQLRSTLFQFAILGFALSEATGLFCLMISFLLLYAV 231
            MNN+VLAGKY+GSG+AT+GLAGAGVG+A+VFAALINGTSRNPQLRS LFQ+A+LGFALSEATGLFCLM+SFLLLYAV
Sbjct:    1 MNNLVLAGKYMGSGMATMGLAGAGVGMAMVFAALINGTSRNPQLRSQLFQYAMLGFALSEATGLFCLMMSFLLLYAV 77
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BLAST of mRNA_H-canaliculatus_F_contig10986.904.1 vs. uniprot
Match: S5U571_PICKL (ATP synthase subunit 9, mitochondrial n=6 Tax=cellular organisms TaxID=131567 RepID=S5U571_PICKL)

HSP 1 Score: 120 bits (302), Expect = 2.490e-34
Identity = 66/74 (89.19%), Postives = 70/74 (94.59%), Query Frame = 1 
Query:   10 IVLAGKYIGSGIATIGLAGAGVGIAIVFAALINGTSRNPQLRSTLFQFAILGFALSEATGLFCLMISFLLLYAV 231
            +VLAGKYIG+GIATIGL GAG+GIAIVFAALINGTSRNP LR+TLF FAILGFALSEATGLFCLMISFLLLY V
Sbjct:    3 LVLAGKYIGAGIATIGLTGAGIGIAIVFAALINGTSRNPGLRNTLFPFAILGFALSEATGLFCLMISFLLLYGV 76
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BLAST of mRNA_H-canaliculatus_F_contig10986.904.1 vs. uniprot
Match: A0A060RCS0_BLAAD (ATP synthase subunit 9, mitochondrial n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060RCS0_BLAAD)

HSP 1 Score: 119 bits (299), Expect = 7.160e-34
Identity = 64/75 (85.33%), Postives = 72/75 (96.00%), Query Frame = 1 
Query:    7 NIVLAGKYIGSGIATIGLAGAGVGIAIVFAALINGTSRNPQLRSTLFQFAILGFALSEATGLFCLMISFLLLYAV 231
            ++VLAGKYIG+GI+TIGL GAG+GIAIVFAALINGTSRNP +RSTLF +AILGFAL+EATGLFCLMISFLLLYAV
Sbjct:    2 HLVLAGKYIGAGISTIGLLGAGIGIAIVFAALINGTSRNPSVRSTLFTYAILGFALAEATGLFCLMISFLLLYAV 76
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BLAST of mRNA_H-canaliculatus_F_contig10986.904.1 vs. uniprot
Match: S5TE26_9ASCO (ATP synthase subunit 9, mitochondrial n=1 Tax=Diddensiella santjacobensis TaxID=2704139 RepID=S5TE26_9ASCO)

HSP 1 Score: 119 bits (298), Expect = 1.020e-33
Identity = 63/74 (85.14%), Postives = 71/74 (95.95%), Query Frame = 1 
Query:   10 IVLAGKYIGSGIATIGLAGAGVGIAIVFAALINGTSRNPQLRSTLFQFAILGFALSEATGLFCLMISFLLLYAV 231
            +VL GKYIGSGIATIGL+GAG+GIAIVFAALINGT+RNP +RSTLF +AILGFAL+EATGLFCLM+SFLLLYAV
Sbjct:    3 LVLLGKYIGSGIATIGLSGAGIGIAIVFAALINGTARNPSIRSTLFTYAILGFALAEATGLFCLMVSFLLLYAV 76
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BLAST of mRNA_H-canaliculatus_F_contig10986.904.1 vs. uniprot
Match: ATP9_PICAN (ATP synthase subunit 9, mitochondrial n=15 Tax=Saccharomycetales TaxID=4892 RepID=ATP9_PICAN)

HSP 1 Score: 117 bits (292), Expect = 8.370e-33
Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 1 
Query:   10 IVLAGKYIGSGIATIGLAGAGVGIAIVFAALINGTSRNPQLRSTLFQFAILGFALSEATGLFCLMISFLLLYAV 231
            +VLA KYIG+ IATIGL GAG+GIAIVFAALINGTSRNP LR+TLF FAILGFALSEATGLFCLMISFLLLY V
Sbjct:    3 LVLAAKYIGAAIATIGLTGAGIGIAIVFAALINGTSRNPSLRNTLFPFAILGFALSEATGLFCLMISFLLLYGV 76
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BLAST of mRNA_H-canaliculatus_F_contig10986.904.1 vs. uniprot
Match: A0A167BWE6_9ASCO (ATP synthase subunit 9, mitochondrial n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167BWE6_9ASCO)

HSP 1 Score: 115 bits (288), Expect = 3.410e-32
Identity = 61/74 (82.43%), Postives = 71/74 (95.95%), Query Frame = 1 
Query:   10 IVLAGKYIGSGIATIGLAGAGVGIAIVFAALINGTSRNPQLRSTLFQFAILGFALSEATGLFCLMISFLLLYAV 231
            +VLAGKY+GSG+AT+GL GAG+GIA+VFAALINGT+RNP +RSTLF +A+LGFALSEATGLFCLMISFLLLYAV
Sbjct:    3 LVLAGKYMGSGMATMGLLGAGMGIALVFAALINGTARNPSVRSTLFTYAMLGFALSEATGLFCLMISFLLLYAV 76
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BLAST of mRNA_H-canaliculatus_F_contig10986.904.1 vs. uniprot
Match: ATP9_VANPO (ATP synthase subunit 9, mitochondrial n=6 Tax=Saccharomycetales TaxID=4892 RepID=ATP9_VANPO)

HSP 1 Score: 114 bits (284), Expect = 1.390e-31
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 1 
Query:   10 IVLAGKYIGSGIATIGLAGAGVGIAIVFAALINGTSRNPQLRSTLFQFAILGFALSEATGLFCLMISFLLLYAV 231
            +VLA KYIG+GI+TIGL GAG+GIAIVFAALING SRNP LR TLF  AILGFALSEATGLFCLMISFLL+YAV
Sbjct:    3 LVLAAKYIGAGISTIGLLGAGIGIAIVFAALINGVSRNPSLRETLFPMAILGFALSEATGLFCLMISFLLIYAV 76
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BLAST of mRNA_H-canaliculatus_F_contig10986.904.1 vs. uniprot
Match: ATP9_ASHGO (ATP synthase subunit 9, mitochondrial n=23 Tax=Saccharomycetaceae TaxID=4893 RepID=ATP9_ASHGO)

HSP 1 Score: 112 bits (281), Expect = 3.980e-31
Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 1 
Query:   10 IVLAGKYIGSGIATIGLAGAGVGIAIVFAALINGTSRNPQLRSTLFQFAILGFALSEATGLFCLMISFLLLYAV 231
            +VLA KYIG+GI+TIGL GAG+GIAIVFAALI G SRNP ++ TLFQFAILGFA+SEATGLFCLMISFLLLY V
Sbjct:    3 LVLAAKYIGAGISTIGLLGAGIGIAIVFAALIQGVSRNPSMKDTLFQFAILGFAISEATGLFCLMISFLLLYGV 76
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BLAST of mRNA_H-canaliculatus_F_contig10986.904.1 vs. uniprot
Match: C7FEY7_DEKBR (ATP synthase subunit 9, mitochondrial n=2 Tax=Brettanomyces TaxID=13366 RepID=C7FEY7_DEKBR)

HSP 1 Score: 111 bits (277), Expect = 1.620e-30
Identity = 58/74 (78.38%), Postives = 68/74 (91.89%), Query Frame = 1 
Query:   10 IVLAGKYIGSGIATIGLAGAGVGIAIVFAALINGTSRNPQLRSTLFQFAILGFALSEATGLFCLMISFLLLYAV 231
            +VLAGKYIG+GIAT+GL GAG+GIAIVFAALINGTSRNP ++ T+F +AILGFALSEATGLFC+M +FLLLY V
Sbjct:    3 LVLAGKYIGAGIATVGLLGAGIGIAIVFAALINGTSRNPGIKDTIFPYAILGFALSEATGLFCMMNAFLLLYGV 76
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10986.904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K9L3B1_MAGMU9.660e-3994.81ATP synthase subunit 9, mitochondrial n=1 Tax=Magn... [more]
A0A023UNF4_9ASCO1.320e-3687.01ATP synthase subunit 9, mitochondrial n=4 Tax=Dipo... [more]
S5U571_PICKL2.490e-3489.19ATP synthase subunit 9, mitochondrial n=6 Tax=cell... [more]
A0A060RCS0_BLAAD7.160e-3485.33ATP synthase subunit 9, mitochondrial n=1 Tax=Blas... [more]
S5TE26_9ASCO1.020e-3385.14ATP synthase subunit 9, mitochondrial n=1 Tax=Didd... [more]
ATP9_PICAN8.370e-3386.49ATP synthase subunit 9, mitochondrial n=15 Tax=Sac... [more]
A0A167BWE6_9ASCO3.410e-3282.43ATP synthase subunit 9, mitochondrial n=1 Tax=Sugi... [more]
ATP9_VANPO1.390e-3183.78ATP synthase subunit 9, mitochondrial n=6 Tax=Sacc... [more]
ATP9_ASHGO3.980e-3181.08ATP synthase subunit 9, mitochondrial n=23 Tax=Sac... [more]
C7FEY7_DEKBR1.620e-3078.38ATP synthase subunit 9, mitochondrial n=2 Tax=Bret... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10986contigH-canaliculatus_F_contig10986:4101..4334 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score117.9
Seed ortholog evalue2.2e-24
Seed eggNOG ortholog1005962.E7E832
Preferred nameatp9
KEGG rclassRC00061
KEGG koko:K02128,ko:K03880
KEGG TC3.A.2.1,3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map05010,map05012,map05016
KEGG ModuleM00142,M00158
GOsGO:0000276,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016310,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0019866,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042776,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046907,GO:0046933,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600,GO:1990542
EggNOG free text desc.ATP hydrolysis coupled proton transport
EggNOG OGs3A3YG@33154,3P7BC@4751,3QYEK@4890,3RV97@4891,COG0636@1,KOG3025@2759
EC1.6.5.3
COG Functional cat.C
Best tax levelSaccharomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03029
Hectar predicted targeting categorysignal anchor
Exons1
Model size234
Cds size234
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928770.926916-CDS-H-canaliculatus_F_contig10986:4100..43341622928770.926916-CDS-H-canaliculatus_F_contig10986:4100..4334Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10986 4101..4334 -
1696845557.3654692-CDS-H-canaliculatus_F_contig10986:4100..43341696845557.3654692-CDS-H-canaliculatus_F_contig10986:4100..4334Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10986 4101..4334 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10986.904.1prot_H-canaliculatus_F_contig10986.904.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10986 4101..4334 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10986.904.1

>prot_H-canaliculatus_F_contig10986.904.1 ID=prot_H-canaliculatus_F_contig10986.904.1|Name=mRNA_H-canaliculatus_F_contig10986.904.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=78bp
MNNIVLAGKYIGSGIATIGLAGAGVGIAIVFAALINGTSRNPQLRSTLFQ
FAILGFALSEATGLFCLMISFLLLYAV*
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mRNA from alignment at H-canaliculatus_F_contig10986:4101..4334-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10986.904.1 ID=mRNA_H-canaliculatus_F_contig10986.904.1|Name=mRNA_H-canaliculatus_F_contig10986.904.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=234bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10986:4101..4334- (Hapterophycus canaliculatus Oshoro5f female)
ATGAATAACATAGTATTAGCTGGAAAATATATAGGTAGTGGTATAGCTAC
AATAGGATTAGCAGGTGCAGGGGTTGGAATAGCAATAGTTTTTGCTGCTT
TAATTAATGGTACAAGCCGTAATCCTCAATTAAGATCAACATTATTCCAA
TTTGCCATCTTAGGGTTTGCCTTAAGTGAAGCAACAGGATTATTCTGTTT
AATGATCTCATTCTTATTATTATATGCTGTATAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10986:4101..4334-

>mRNA_H-canaliculatus_F_contig10986.904.1 ID=mRNA_H-canaliculatus_F_contig10986.904.1|Name=mRNA_H-canaliculatus_F_contig10986.904.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=468bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10986:4101..4334- (Hapterophycus canaliculatus Oshoro5f female)
ATGAATAACATAGTATTAGCTGGAAAATATATAGGTAGTGGTATAGCTAC
AATAGGATTAGCAGGTGCAGGGGTTGGAATAGCAATAGTTTTTGCTGCTT
TAATTAATGGTACAAGCCGTAATCCTCAATTAAGATCAACATTATTCCAA
TTTGCCATCTTAGGGTTTGCCTTAAGTGAAGCAACAGGATTATTCTGTTT
AATGATCTCATTCTTATTATTATATGCTGTATAAATGAATAACATAGTAT
TAGCTGGAAAATATATAGGTAGTGGTATAGCTACAATAGGATTAGCAGGT
GCAGGGGTTGGAATAGCAATAGTTTTTGCTGCTTTAATTAATGGTACAAG
CCGTAATCCTCAATTAAGATCAACATTATTCCAATTTGCCATCTTAGGGT
TTGCCTTAAGTGAAGCAACAGGATTATTCTGTTTAATGATCTCATTCTTA
TTATTATATGCTGTATAA
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