mRNA_H-canaliculatus_F_contig1093.866.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1093.866.1 vs. uniprot
Match: D7FM75_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM75_ECTSI) HSP 1 Score: 536 bits (1380), Expect = 9.440e-173 Identity = 323/681 (47.43%), Postives = 406/681 (59.62%), Query Frame = 1 Query: 4 LWDEERGFHVTPPSPGAEAGQLPLELDALLRVLEKAGGHLRGN-PWQYPPRAVVNGGASA-IRKYFTAVFAESSSIVERPLKVVLIGKEKVGKTSLRQSIREGKACPTDDIPEERTVHIDVEDLTIQGDNVRVFDCAGQEAYYASLQLFLTPNALYLLVVDMASAVDNVAEDAQNPLGELGVLRWVRSLTYRVPNAAVVLVGTKCDLVTDLLHLSSLERLEAAAATLQTKITGCLSSWAARS----SSRQIHLEEGVRLVHFDKSTGSPLVDTGKGWSCDVNEPGLLGRISRDSSGNKRAVSMRLPSSWQHALDFLDKRARRPRKQSEFQGFLKTELFRDWQEEWKTRSADVTDRDAAEAALDGALQLRGAEGGLVVYGLYVFFAVHWLADVLKPLLSMRLVTSDGCTTLGGKEIPTSAINASLARFERKGILEPALADELWGKETAPHVLKTLESAGLTFPRAGDECGGLVVLLRLPKERPEHVGIKIDDFRREKTEGGRDGGIKAVCTFLRGVPPGFIERLLTKCCHLGACDPFWRFGVLIEAGDLFSAILEYRESDG-LVGKLTLEVLGDCTTAGPWGGMSACLSVVVQLLSGFPGMSAAAEMECQRHLSDS--IPLELRQSLEWAPLIRQVDGCGSCSERHKEVARLL----LLYVPAADSPLDMEAILPKFEEAAS 2007 LW+ ER +P + +P LD+LLRV+E GN PW+YPP V+ S +R+YF AV A S S V RPLKVV++GKE VGKTSLRQSI GKA PT + E TVHIDVED + G +R+FDCAGQ AY LQLFLTP ++LLVVDM S V N+ NPL +LG LRWVRSL++RVP AAV+LVGTKCD V D ++ RL AA ++ I + W + ++ I E GV LV+ G P + GW CDV++P LL RI+ G R V LP SW AL LD+ ARR R Q F+G +TEL W ++ + +A E ALDGA+ + EG LVVYG +V V WLA VLKPL S + + S G LGG + + R + GILEP LA+ELW +T H+L+ L SAGLTFPR D+ GGLVVLLRL K+RP+ VG +DDFR DG I A CT L+G PPGFIERLL+ CC LG+C+ FWR+GVLI++ FS ILEY E D LVGK +++ GD TAGPW +S CLSV+ ++LS FPGM A +EC H S IP++L Q W IR+VDGC C ++ AR L L+ VP DS D KF++A + Sbjct: 288 LWEVERKSRQGRTTPLSAKEPVPSALDSLLRVVEGCSQVRWGNNPWRYPPAEVMGQSISVHVRQYFNAVLAGSVSTVRRPLKVVVVGKESVGKTSLRQSIVAGKARPTRNHGGESTVHIDVEDHELDGRPIRIFDCAGQVAYTGLLQLFLTPQVIHLLVVDMPSVVGNIENGTSNPLEDLGALRWVRSLSFRVPGAAVILVGTKCDRVKDTDGETTEARLSRAAGMVEDNIRSWIHKWTTQRLHNHHAQSIAFENGVSLVNC----GLPCDELDGGWPCDVSQPSLLHRITF-KDGKARGVDADLPLSWGCALSLLDETARRVRGQPGFRGVERTELDGLWHDKVDELKRGGHEMEATEHALDGAISIMAYEGSLVVYGSFVIVDVQWLATVLKPLCSHKDM-SMGEVNLGGITVRPGP---RVERLVKDGILEPKLAEELW-PDTWEHLLRALSSAGLTFPRPNDKEGGLVVLLRLDKDRPDDVGDILDDFR-----ASHDGQIVASCTLLQGAPPGFIERLLSTCCRLGSCNHFWRYGVLIQSRS-FSVILEYAEDDDTLVGKFSVDAFGDSRTAGPWLALSGCLSVLSKMLSEFPGMDVEATLECPYHSGGSRLIPIDLYQRRPWQCFIREVDGCRRCIHEGEQNARHLFSRGLVVVPVTDSGFDTAGFTRKFDDATT 952
BLAST of mRNA_H-canaliculatus_F_contig1093.866.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI) HSP 1 Score: 426 bits (1094), Expect = 2.720e-129 Identity = 273/677 (40.32%), Postives = 372/677 (54.95%), Query Frame = 1 Query: 43 SPGAEAGQLPLELDALLRVLEKAGG----HLRGNPWQYPPRAVVNGGASAIRKYFTAVFAESSSIVERPLKVVLIGKEKVGKTSLRQSIREGKACPTDDIPEERTVHIDVEDLTIQGDNVRVFDCAGQEAYYASLQLFLTPNALYLLVVDMASAVDNVAEDAQNPLGELGVLRWVRSLTYRVPNAAVVLVGTKCDLVTDLLHLSSLERLEAAAATLQTKITGCLSSWAARSSSRQIH---LEEGVRLVHFDKS---TGSPLVDTGKGWSCDVNEPGLLGRISRDSSGNKRAVSMRLPSSWQHALDFLDKRARRPRKQSE--FQGFLKTELFRDWQEEWKTRSADV----TDRDAAEAALDGALQLRGAEGGLVVYGLYVFFAVHWLADVLKPLLSMRLVTSDGCTTLGGKEIPTSAINASLARFERKGILEPALADELWGKETAPHVLKTLESAGLTFPRAGDECGGLVVLLRLPKERPEHVGIKIDDFRREKTEGGRDGGIKAVCTFLRGVPPGFIERLLTKCCHLGACDPFWRFGVLI-----EAGDLFSAILEYRESDGLVGKLTLEVLGDCTTAGPWGGMSACLSVVVQLLSGFPGMSAAAEMECQRHLSDSIPLELRQSLEWAPLIRQVDGCGSCSERHKEVARLL--LLYVPAADSPLDMEAILPKFEEAA 2004 S A G LP++L R+L++ G L NPW++PP A+V GG A+R Y+ A+F ++ V RPLKVV+IGKE VGKTSLR+SI G C T + E TVH+DVED + G +R+FDCAGQ YY LQLFLTP A+YLLV D A A + D N L +L + W+R LT+RVP+A V+LVG K D V + A ++ + L SW ++ Q H LE+GV LV +S +P G GW CD + PGL R+ D +KR V+M LP S++ AL+ L++ A R+++E +G + +L +E+W + A++ T A EAA+ GA+ +R EGGLV YG YVF V W A VL PL S R S G LGG + A SL R + + + EP LA+ELW E APH+L L+SAGLTFP D GGLV+LLR+ RP GIK++ + R + C+F G+PPGF+ERLL +CCH+G PFWR+G LI E G LFS +EY E D + L LEV G C W +S LSV++++LS FPG+ C +H + +P+ + L+ + C C +R + L L V +D E + +F E A Sbjct: 476 SMAARPGTLPVDL---ARLLDRFDGLVTLDLSRNPWEHPPEAIVAGGVQAVRGYYDAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEM---DGLN-LEDLAIAPWLRYLTFRVPDANVILVGNKWDRV--------VRTRGTVADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADL----EEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRR-DSYGDIDLGGIRVTNLA---SLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYGIKLEQVHKASEADLR---LTVACSFSLGLPPGFVERLLARCCHMGYPFPFWRYGALIVGNGAEKG-LFSLSVEYSEEDKI---LALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLLAAALQVVEFSDEKFLDEPLREQFAENA 1122
BLAST of mRNA_H-canaliculatus_F_contig1093.866.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI) HSP 1 Score: 419 bits (1076), Expect = 4.180e-128 Identity = 268/654 (40.98%), Postives = 361/654 (55.20%), Query Frame = 1 Query: 1 ALWDEERGFHVTPPSPGAEAGQLPLELDALLRVLEKAGG-HLRGNPWQYPPRAVVNGGASAIRKYFTAVFAESSSIVERPLKVVLIGKEKVGKTSLRQSIREGKACPTDDIPEERTVHIDVEDLTIQGDNVRVFDCAGQEAYYASLQLFLTPNALYLLVVDMASAVDNVAEDAQNPLGELGVLRWVRSLTYRVPNAAVVLVGTKCDLVTDLLHLSSLERLEAAAATLQTKITGCLSSW---AARSSSRQIHLEEGVRLVHFDKS---TGSPLVDTGKGWSCDVNEPGLLGRISRDSSGNKRAVSMRLPSSWQHALDFLDKRARRPRKQSEFQ--GFLKTELFRDWQEEWKTRSADVTDRDAAEAALDGALQLRGAEGGLVVYGLYVFFAVHWLADVLKPLLSMRLVTSDGCTTLGGKEIPTSAINASLARFERKGILEPALADELWGKETAPHVLKTLESAGLTFPRAGDECGGLVVLLRLPKERPEHVGIKIDDFRREKTEGGR-DGGIKAVCTFLRGVPPGFIERLLTKCCHLGACDPFWRFGVLIEAGD----LFSAILEYRESDGLVGKLTLEVLGDCTTAGPWGGMSACLSVVVQLLSGFPGMSAAAEMECQRHLSDSIPLELRQSLEWAPLIRQVDGCGSCSERHKEV 1920 AL +E G P G LP+ L LL LE+ + NPW+ PP A+V GG A+R YF A++ ++ V RPLKVV++GKE VGKTSLR+SI+ GK C T EE TVH+DVED + G +R+FDCAGQ YY LQLFLTP A+YLLV D A A +E L +L + W+R LT+RVP+A+V+LVG KCD V R A A ++ + L SW A R I LE+GV LV S +P GW CD + PGL RI DS+ + R V+MRLP S++ AL+ L++ A R ++E Q G + L WQ + + T A +AA+ GA+ +R EGGLV YG YVF V W A VL PL + S G LGG + SL R + + +LEP LA++LWG APH+L L+SAGLTFP + D GGLV+LLR+ + P GIK+ +EK + + D + C+F G+PPGF+ERLL +CCHLG PFWR+G LI +FS LEY E+ + LT+EV G T W +S LSV +++L FPG+ C H ++ + + + + + L+ + D C C +R V Sbjct: 303 ALGQDETGSMAAGP------GTLPVPLACLLDSLERIYRLSVAQNPWESPPDAIVVGGIPAVRAYFEAIYMGGTTAVTRPLKVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEESTVHVDVEDHDLDGHPIRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKA----SEMEGLNLEDLAIAPWLRHLTFRVPDASVILVGNKCDRVVR-------TRRTAVAVDVEHESRQWLESWIEIARGHQPRGISLEDGVSLVSCAASGVGAVAPSFGRRSGWPCDKSTPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLEELASCSRSKTEQQTRGITRAILEEKWQAKVAEMNRAGTSVAAPDAAMAGAILIRKWEGGLVEYGSYVFLDVEWFATVLDPLFCHKR-DSYGKIDLGGIRVMDVD---SLDRLDEEHVLEPQLAEDLWGPVLAPHLLLALKSAGLTFPLSNDSNGGLVILLRMDTKPPPDYGIKL----KEKDQANKFDLRLVVECSFRLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEERMFSLSLEYSEARKI---LTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLHKTNGMKIRTKDARPGSCLVGESDFCKLCQDRSAAV 928
BLAST of mRNA_H-canaliculatus_F_contig1093.866.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI) HSP 1 Score: 420 bits (1079), Expect = 7.150e-128 Identity = 275/676 (40.68%), Postives = 369/676 (54.59%), Query Frame = 1 Query: 43 SPGAEAGQLPLELDALLRVLEKAGG-HLRGNPWQYPPRAVVNGGASAIRKYFTAVFAESSSIVERPLKVVLIGKEKVGKTSLRQSIREGKACPTDDIPEERTVHIDVEDLTIQGDNVRVFDCAGQEAYYASLQLFLTPNALYLLVVDMASAVDNVAEDAQNPLGELGVLRWVRSLTYRVPNAAVVLVGTKCDLVTDLLHLSSLERLEAAAATLQTKITGCLSSWAARSSSRQIH---LEEGVRLVHFDKS---TGSPLVDTGKGWSCDVNEPGLLGRISRDSSGNKRAVSMRLPSSWQHALDFLDKRARRPRKQSE--FQGFLKTELFRDWQEEWKTRSADV----TDRDAAEAALDGALQLRGAEGGLVVYGLYVFFAVHWLADVLKPLLSMRLVTSDGCTTLGGKEIPTSAINASLARFERKGILEPALADELWGKETAPHVLKTLESAGLTFPRAGDECGGLVVLLRLPKERPEHVGIKIDDFRREKTEGGR--DGGIKAVCTFLRGVPPGFIERLLTKCCHLGACDPFWRFGVLI-----EAGDLFSAILEYRESDGLVGKLTLEVLGDCTTAGPWGGMSACLSVVVQLLSGFPGMSAAAEMECQRHLSDSIPLELRQSLEWAPLIRQVDGCGSCSE--RHKEVARLLLLYVPAADSPLDMEAILPKFEEAA 2004 S A G LP++L LL V + L NPW++PP A+V GG A+R Y+ A+F ++ V RPLKVV+IGKE VGKTSLR+SI G C T + E TVH+DVED + G +R+FDCAGQ YY LQLFLTP A+YLLV D A A + D N L +L + W+R LT+RVPNA V+LVG K D V + A ++ + L SW ++ Q H LE+GV LV +S +P G GW CD + PGL R+ D +KR V+M LP S++ AL+ L++ A R+++E +G + +L +E+W + A++ T A EAA+ GA+ +R EGGLV YG YVF V W A VL PL S R S G LGG + A SL R + + + EP LA+ELW E APH+L L+SAGLTFP D GGLV+LLR+ RP I RRE+ R D + C+F G+PPGF+ERLL +CCHLG PFWR+G LI E G LFS L+Y E D + L +EVLG W +S LSV++++LS FPG+ C +H + +P+ + + L+ + C C + + L V +D E + KF E A Sbjct: 383 SMAARPGTLPVDLARLLDVFDGLRSLDLSRNPWEHPPEAIVAGGVQAVRGYYEAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEM---DGLN-LEDLAIAPWLRYLTFRVPNANVILVGNKWDRV--------VRTRGTVADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADL----EEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRR-DSYGDIDLGGIRVTNLA---SLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYSI-----RREEANQARKYDLTLSVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEKG-LFSLSLDYSEHDNM---LKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPIRTTDAPPGSGLVEKGYFCPLCQDPTAGNNLLAAALQVVEFSDEEFFDEPLRQKFAENA 1029
BLAST of mRNA_H-canaliculatus_F_contig1093.866.1 vs. uniprot
Match: A0A6H5JRW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE) HSP 1 Score: 386 bits (991), Expect = 3.270e-118 Identity = 259/645 (40.16%), Postives = 349/645 (54.11%), Query Frame = 1 Query: 61 GQLPLELDALL----RVLEKAGGHLRGNPWQYPPRAVVNGGASAIRKYFTAVFAESSSIVERPLKVVLIGKEKVGKTSLRQSIREGKACPTDDIPEERTVHIDVED--LTIQ-----GDNVRVFDCAGQEAYYASLQLFLTPNALYLLVVDM--ASAVDNVAEDAQNPLGELGVLRWVRSLTYRVPNAAVVLVGTKCDLVTDL-LHLSSLERLEAAAATLQTKITGCLSSW---AARSSSRQIHLEEGVRLVHF---DKSTGSPLVDTGKGWSCDVN---EPGLLGRISRDSSGNKRAVSMRLPSSWQHALDFLDKRARRPRKQSEFQGFLKTELFRDWQEEWKTRSADVTDRDAAEAALDGALQLRGAEGGLVVYGLYVFFAVHWLADVLKPLLSMRLVTSDGCTTLGGKEIPTSAINASLARFERKGILEPALADELWGKETAPHVLKTLESAGLTFPRAGDECGGLVVLLRLPKERPEHVGIKIDDFRREKTEGGRDGGIKAVCTFLRGVPPGFIERLLTKCCHLGACDPFWRFGVLI-----EAGDLFSAILEYRESDGLVGKLTLEVLGDCTTAGPWGGMSACLSVVVQLLSGFPGMSAAAEMECQRHLSDSIP-LELRQSLEWAPLIRQVDGCGSCSER 1908 G LP+ L +LL R+ G L NPW++PP A+V GG A+R YF A+F +++V RPLKVV++G E VGKTSLR SI+ GK C T + TVH+DV+D L +Q G +R+FDCAGQ AYY LQLFLTP A+YLLV D AS +D + L +L + W+R +T+RVP+A VVLVG K DLV + LH++ ++ K L++W A R Q+ LE GV LV ++ +P K W CD N +PGL RI + + RAV+MRL + AL+ L++ A R R + T A+EAAL GA+ +R EGGLV YG Y+F V W ADVL PL S + S+G LGGK + + SL R + I EP LA++LWG E APH+L L SAGLTFP D GLVV+LR+ E P +++ + K R + C+F G+PPGF+ERLL +CCHLG PFWR+G L+ E G FS LEY E D L ++V G C+ W +S LSV +++LS FPG+ E C RH S+ L+ + + L+ + + C C +R Sbjct: 6 GTLPVALASLLDSFDRLHSVGGLDLSQNPWEHPPEAIVTGGMLAVRGYFEAIFRGGTTVVTRPLKVVIVGMETVGKTSLRCSIKAGKPCMTRGGGVDSTVHVDVQDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDAEKASQMDELN------LEDLAIAPWLRQMTFRVPDANVVLVGNKWDLVAEANLHVAD---------DVERKSREWLTAWIESAHRHQPPQLSLEAGVSLVSCAPSGRAGWAPSFGGRKAWPCDKNKPGQPGLFRRIIYNPVDDMRAVTMRLSPVYVLALNLLEELASRSRVDA--------------------LGTAGTTAAASEAALSGAILIRKWEGGLVEYGNYIFLDVGWFADVLDPLFSHKK-DSNGIIYLGGKTVTN---DDSLKRLDANHIFEPRLAEDLWGAELAPHLLSALNSAGLTFPIPNDPFEGLVVVLRMDTEPPPDYRTIVEEEQARKYYDLR---LVVQCSFRLGLPPGFVERLLARCCHLGFPHPFWRYGALVVGAGAEEGK-FSLTLEYSEEDKT---LKVQVNGRCSEVHAWATLSKVLSVTIKMLSEFPGLPCQLEFLCPRHEDKSMRVLKANNARPGSRLVEEGNFCPVCPDR 604
BLAST of mRNA_H-canaliculatus_F_contig1093.866.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 359 bits (922), Expect = 1.370e-105 Identity = 261/728 (35.85%), Postives = 366/728 (50.27%), Query Frame = 1 Query: 1 ALWDE-ERGFHVTPPSPGAEAGQLPLELDALLRVLEKAGGHLRG---NPWQYPPRAVVNGGASAIRKYFTAVFAESSSIVERPLKVVLIGKEKVGKTSLRQSIREGKACPTDDIPEERTVHIDVEDLTIQGDNVRVFDCAGQEAYYASLQLFLTPNALYLLVVDMAS--------AVDNVAEDAQNPLGELGVLRWVRSLTYRVPNAAVVLVGTKCDLVTDLLHLSSLERLEAAAATLQTKITGCLSSWAARSSSRQIHLEEGVRLV---------HFDKSTGSPLVDTGKGWSCDVNE-------PGLLGRISRDSSGNK-RAVSMRLPSSWQHALDFLD--KRARRP---------------------RKQSEFQGFLKTELFRDWQEE---WKTRSADVTDRDAAEAALDGALQLRGAEGGLVVYGLYVFFAVHWLADVLKPLLSMR-LVTSDGCTTLGGKEIPTSAIN-----ASLARFERKGILEPALADELWGKETAPHVLKTLESAGLTFPRAGDECGGLVVLLRLPKERPEHVGIKIDDFRREKTEGGRDGGIKAVCTFLRGVPPGFIERLLTKCCHLGACDPFWRFGVLIEAG-------DLFSAILEYRESDGLVGKLTLEVLGDCTTAGPWGGMSACLSVVVQLLSGFPGMSAAAEMECQRHLSDSIPLELRQSLEWAPLIRQVDGCGSCSERHKEVARLLLLYVPAADSPLDMEAI 1980 ALWD + HV GQLP +L LL VL++A G + G NPW PP ++V+ G ++IR YF ++ ESS + +K++L+G+E GKTSLRQS++ A PT + EE TV DVE + ++G VRV+DCAGQ AY LQ+FLTP ++ +LV + + V ED + L EL V W+RS++ RVPN V+LV TKCDLV R+E A T L+SW + + LE GV L + +KSTG + +GW+CD + PGL+ R+ G+ R M LP SW AL L+ +R R P R+ +QG L WQE R +VT+ A+ AL+GAL +R +G LV + ++VF V WLA +LKPLL+ + T DG LG + AS R + +G+LEP LA +W + +VL TL S GLTFP D GGLVVLLRL +RPE VG ID F ++T GVP G IE++LT+CC LG FWR GVL+ G ++F+ +LEY SD +LT ++ GD +T PW +S +S V +L FPG+ + ++C +H D++ L + + L+ + GC CS + + + V D LD + I Sbjct: 155 ALWDHTQNAQHVEEGGNRTLGGQLPSQLCRLLDVLDRATGGILGLDDNPWAEPPASIVSKGPTSIRGYFEDLYVESSRVQRNSVKIILVGQEGAGKTSLRQSMKANAAIPTGEWKEESTVFADVEPMQLEGSFVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAFGQQRGDDTGGQVKEDCRK-LEELRVCDWLRSVSRRVPNNDVILVATKCDLVGGNAEEFG-RRIEQATRTW-------LASWV-HDGMQPVRLEPGVCLTSCCASAVGENGEKSTGHNASE--RGWACDWRDDRDDMPPPGLVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGRDPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAVVGLARRGVNVTN---AKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPA-----FSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDN---ELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQH-GDAMLLVNKMTQAGVKLL-EPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVI 857
BLAST of mRNA_H-canaliculatus_F_contig1093.866.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE) HSP 1 Score: 347 bits (890), Expect = 3.600e-104 Identity = 249/674 (36.94%), Postives = 341/674 (50.59%), Query Frame = 1 Query: 1 ALWDEERGFHVTPPSPG--AEAGQLPLELDALLRVLE--KAGGHL--RGNPWQYPPRAVVNGGASAIRKYFTAVFAESSSIVERPLKVVLIGKEKVGKTSLRQSIREGKACPTDDIPEERTVHIDVEDLTIQGDNVRVFDCAGQEAYYASLQLFLTPNALYLLVVDM--------ASAVDNVAEDAQNPLGELGVLRWVRSLTYRVPNAAVVLVGTKCDLVTDLLHLSSLERLEAAAATLQTKITGCLSSWAARSSSRQIHLEEGVRLV---------HFDKSTGSPLVDTGKGWSCD-------VNEPGLLGR-ISRDSSGNKRAVSMRLPSSWQHALDFLD--KRARRPRKQ--------------------SEFQGFLKTELFRDWQ---EEWKTRSADVTDRDAAEAALDGALQLRGAEGGLVVYGLYVFFAVHWLADVLKPLLSMR-LVTSDGCTTLGGKEIPTSAIN-----ASLARFERKGILEPALADELWGKETAPHVLKTLESAGLTFPRAGDECGGLVVLLRLPKERPEHVGIKIDDFRREKTEGGRDGGIKAVCTFLRGVPPGFIERLLTKCCHLGACDPFWRFGVLIEAG-------DLFSAILEYRESDGLVGKLTLEVLGDCTTAGPWGGMSACLSVVVQLLSGFPGMSAAAEMECQRH 1815 ALWD + G G +P +L LL +LE +AG HL NPW PP ++V G ++R YF +FA+ I R +KVVL+G+E GKTSLRQS++ KA PT + EE TV DVE + ++G +VRV+DCAGQ AY LQ+FLTP ++ +LV + + +D V ED + G L V W+RS++ RVP V+LV TKCDLV + + +R+E A T LSSW R+ + LE V L H + G+ + +GW+CD ++ P LL R +++ G R V M LP SW AL FLD + R P + + +QG EL WQ +E R VT+ AE AL+GAL +R +G LV + +VF V WLA +LKPLL+ + DG LG ++ AS R + +G+LEP LAD +W + +VL TL S GL FP D GLVVLLRL RPE VG ID F G +A GVPPG +E++LT+CC LG FWR+GVL+ G F+ ++EY +D +L +V GD + GPW MS +S V +L FPG+ ++C +H Sbjct: 89 ALWDHTQNVQDVNHDGGDSMSGGPMPSQLCRLLDLLESREAGRHLSLNSNPWAEPPESIVAKGLKSVRGYFEDLFADHCRIKRRGVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMKLEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFRQQLGSDNIDQVEEDCRKLEG-LRVCDWLRSISCRVPGNDVILVATKCDLVNGNVEETG-QRIEHACRTW-------LSSWV-RNGMDSVRLERHVSLTSCFPIGASEHGESRRGNHALK--QGWACDWRDVEGDMSSPSLLYRLVNKPDQGGLRGVQMVLPRSWDVALTFLDSLEYGRHPVEMVMLKSPDSDSGATETAGGTTTVYQGITVEELSARWQGTVDELGRRGITVTN---AENALEGALSIREFDGSLVCHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDPSDIASWDRLKNEGVLEPRLADAIWPDGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGEVIDTFC-----SGLTPAFRASWKVFLGVPPGAVEKVLTRCCALGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDN---ELVAQVFGDISRPGPWMAMSYVMSAVSLMLVDFPGLRWKGSLKCPQH 739
BLAST of mRNA_H-canaliculatus_F_contig1093.866.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI) HSP 1 Score: 357 bits (916), Expect = 4.630e-104 Identity = 252/683 (36.90%), Postives = 345/683 (50.51%), Query Frame = 1 Query: 1 ALWDEERGFHVTPPSPGAEAGQ-------LPLELDALLRVLEKAGGHLRGNPWQYPPRAVVNGGASAIRKYFTAVFAESSSIVERPL-KVVLIGKEKVGKTSLRQSIREGKACPTDDIPEERTVHIDVEDLTIQGDNVRVFDCAGQEAYYASLQLFLTPNALYLLVVDMASA---------VDNVAEDAQNPLGELGVLRWVRSLTYRVPNAAVVLVGTKCDLVTDLLHLSSLERLEAAAATLQTKITGCLSSWAARSSSRQ---IHLEEGVRLVHFDKST----GSPLVDTGKG------WSCD-------VNEPGLLGRISRDSSGNKRAVSMRLPSSWQHALDFLDK--RARRPRKQSE-------------------FQ------GFLKTELFRDWQEEWKTRSADVTDRDAAEAALDGALQLRGAEGGLVVYGLYVFFAVHWLADVLKPLLSMRLVTSD--GCTTLG--GKEIPTSAINASLARFERKGILEPALADELWGKETAPHVLKTLESAGLTFPRAGDECGGLVVLLRLPKERPEHVGIKIDDFRREKTEGGRDGGIKAVCTFLRGVPPGFIERLLTKCCHLGACDPFWRFGVLIE-------AGDLFSAILEYRESDGLVGKLTLEVLGDCTTAGPWGGMSACLSVVVQLLSGFPGMSAAAEMECQRHLSD 1824 A WD H T SP E Q LP +L+ALL L + G H+ NPWQ PP AVV+ G A+R+YFT +FAE + V R + KV+L+G+E GKTSLRQS+R G+ PT PEE TV IDVE + + G +RV+DCAGQ AY LQ+FL+P A+ LLV D + D + +D N L EL V W+RSL++R+P++ VV+V TKCDL + AA ++ G +W S Q + +E+GV L ST G + T + W+CD ++P LL R+ ++ G R S+ LP SW L LD R P + ++ +Q G + +L W + D + AL+GAL +R EG LV + YVF V WLA +LKPLL+ R G +LG G + AS R + G+LEP LA LW + +VL TL+S GLT+P D GLVVLLRL ++RPE VG ++DDFRR+ T + GVPPG IE++LT+CC LG FWRFGVL++ A F+ ++EY ++ +EV G TA PW +S +SV + S FPG+ A ++C +H D Sbjct: 167 AFWD-----HSTDVSPDEELLQGNLAGSSLPKQLEALLATLSQLGLHVHTNPWQEPPEAVVSKGIPAVREYFTDLFAEGIAPVGRKMIKVILVGQEGAGKTSLRQSLRTGRPTPTSG-PEESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDTGAFGQRDGSLTDSDQLKKDL-NKLQELRVCDWLRSLSFRIPDSDVVMVATKCDLAAGM------------AADAAARMAGGAGNWIESWSDAQMTAVRVEDGVNLTSCFASTPNEDGGAALGTRESPEEQSTWACDWSDGMCVESQPSLLHRVMYNNKGELRGASLVLPRSWNIGLGVLDALGSGRDPVESAQQMVLASGGPKGAAEVVPAVYQRNQGVGGLTRADLSTKWNDVVAALEEDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPELAGVLWPDGLSNYVLPTLDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHT-----AVLSVKWKIFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGMAAKTFALLIEYSHDTC---EVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHEQD 822
BLAST of mRNA_H-canaliculatus_F_contig1093.866.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI) HSP 1 Score: 354 bits (908), Expect = 1.010e-102 Identity = 255/680 (37.50%), Postives = 349/680 (51.32%), Query Frame = 1 Query: 1 ALWDEERGFHVTPPSP------GAEAGQ-LPLELDALLRVLEKAGGHLRGNPWQYPPRAVVNGGASAIRKYFTAVFAESSSIVERPL-KVVLIGKEKVGKTSLRQSIREGKACPTDDIPEERTVHIDVEDLTIQGDNVRVFDCAGQEAYYASLQLFLTPNALYLLVVDMASA---------VDNVAEDAQNPLGELGVLRWVRSLTYRVPNAAVVLVGTKCDLVTDLLHLSSLERLEAAAATLQTKITGCLSSWAARSSSRQIHLEEGVRLVHFDKST-----GSPL-----VDTGKGWSCDVNE-------PGLLGRISRDSSGNKRAVSMRLPSSWQHALDFLDK--RARRPRKQSE-------------------FQ------GFLKTELFRDWQEEWKTRSADVTDRDAAEAALDGALQLRGAEGGLVVYGLYVFFAVHWLADVLKPLLSMRLVTSD--GCTTLG--GKEIPTSAINASLARFERKGILEPALADELWGKETAPHVLKTLESAGLTFPRAGDECGGLVVLLRLPKERPEHVGIKIDDFRREKTEGGRDGGIKAVCTFLRGVPPGFIERLLTKCCHLGACDPFWRFGVLIE-------AGDLFSAILEYRESDGLVGKLTLEVLGDCTTAGPWGGMSACLSVVVQLLSGFPGMSAAAEMECQRHLSD 1824 A WD H T P G AG LP +L+ALL L + G + NPWQ PP AVV+ G SA+++YFT +FAE + V R + KVVL+G+E GKTSLRQS+R G+ PT EE TV IDVE + + G +RV+DCAGQ AY LQ+FL+P A+ LLV D+ + D + +D L EL V W+RSL++R+P++ VV+V TKCDL + + R+E A I L SW+ + +H+E+GV L T G+ L D W+CD E P LL R+ +S GN R S+ LP SW AL+ LD R P + ++ +Q G + +L W E D + AL+GAL +R EG LV + YVF V WLA +LKPLL+ R G +LG G + AS R + G+LEP+LA LW + +VL L+S GLT+P D GLVVLLRL ++RPE VG ++DDFRR+ T + GVPPG IE++LT+CC LG FWRFGVL++ A F+ ++EY ++ ++V G +TA PW +S +SV + S FPG+ A ++C +H D Sbjct: 203 AFWD-----HCTDVLPDEDLLQGNLAGNALPKQLEALLATLSRLGFLVHENPWQEPPEAVVSKGISAVQEYFTDLFAEGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSG-SEESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSK-LQELRVCDWLRSLSFRIPDSDVVVVATKCDLAAGM-GTDAAGRIEGA-------IGEWLESWSG-AGMNAVHVEDGVSLTSCFPPTPNEDGGAALGKRKSPDEDSTWACDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNVLASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVAALEGDGVSVVKPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPSLARVLWPDGLSNYVLPALDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHT-----AVLSVKWKVFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGIAARTFALVVEYSHDKC---EVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHEQD 858
BLAST of mRNA_H-canaliculatus_F_contig1093.866.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 343 bits (881), Expect = 1.660e-100 Identity = 250/675 (37.04%), Postives = 339/675 (50.22%), Query Frame = 1 Query: 1 ALWDEERGFHVTPPSPGAE---AGQLPLELDALLRVLEKAGG---HLRGNPWQYPPRAVVNGGASAIRKYFTAVFAESSSIVERPLKVVLIGKEKVGKTSLRQSIREGKACPTDDIPEERTVHIDVEDLTIQGDNVRVFDCAGQEAYYASLQLFLTPNALYLLVVDM--------ASAVDNVAEDAQNPLGELGVLRWVRSLTYRVPNAAVVLVGTKCDLVTDLLHLSSLERLEAAAATLQTKITGCLSSWAARSSSRQIHLEEGVRLV---------HFDKSTGSPLVDTGK-GWSCD-------VNEPGLLGR-ISRDSSGNKRAVSMRLPSSWQHALDFLDK-----------------RARRPR-----KQSEFQGFLKTELFRDWQE---EWKTRSADVTDRDAAEAALDGALQLRGAEGGLVVYGLYVFFAVHWLADVLKPLLSMR-LVTSDGCTTLGGK-----EIPTSAINASLARFERKGILEPALADELWGKETAPHVLKTLESAGLTFPRAGDECGGLVVLLRLPKERPEHVGIKIDDFRREKTEGGRDGGIKAVCTFLRGVPPGFIERLLTKCCHLGACDPFWRFGVLIEAG-------DLFSAILEYRESDGLVGKLTLEVLGDCTTAGPWGGMSACLSVVVQLLSGFPGMSAAAEMECQRH 1815 ALWD + G + G +P +L LL VL++ G L GNPW PP ++V G +IR YF ++AE I +KVVL+G+E GKTSLRQS++ KA PT + EE TV DVE + ++G +VRV+DCAGQ AY LQ+FLTP ++ +LV + + VD V ED + L L V W+RS++ RVP V+LV TKCDLV+ E L+ LS+W R+ + LE V L H + +TGS D K GW+CD + P LL R +++ G R V M LP SW AL L+ RRP K + +Q EL +W+E E R VT+ AE AL+GAL +R +G LV + +VF V WLA +LKPLL+ + T DG LG + S+ AS R + +G+LEP LA +W + +VL TL S GLTFP GD GLVVLLRL RP VG ID F + T A GVPPG IE++LT+CC LG FWR+GVL+ G +F+ + EY ++ +LT ++ GD +T+ PW +S S V +L FPG+ ++C +H Sbjct: 40 ALWDHTQNVQDVHHKEGGDIMPGGAMPSQLCRLLVVLDRLSGVNLALLGNPWAEPPESIVAKGPKSIRGYFEDLYAEPCWIKRSSVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGSDNVDQVEEDCRK-LQALRVCDWLRSISRRVPGNDVILVATKCDLVSG--------NAEETGRRLEHACRMWLSTWV-RNGMDPVRLEPHVSLTSCFPIGDGEHGESNTGS---DASKQGWACDWRHVEGDKSSPSLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEMVLLKSPDSERRPTETGVGKTNVYQAIKVEELGTNWRETVDELGKRGIVVTN---AENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQRTFDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRLEPNRPASVGEAIDTFCSKYTPA-----FSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVTEYSSTNN---ELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQH 690 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1093.866.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1093.866.1 >prot_H-canaliculatus_F_contig1093.866.1 ID=prot_H-canaliculatus_F_contig1093.866.1|Name=mRNA_H-canaliculatus_F_contig1093.866.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=798bp ALWDEERGFHVTPPSPGAEAGQLPLELDALLRVLEKAGGHLRGNPWQYPPback to top mRNA from alignment at H-canaliculatus_F_contig1093:17514..28471- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1093.866.1 ID=mRNA_H-canaliculatus_F_contig1093.866.1|Name=mRNA_H-canaliculatus_F_contig1093.866.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=10958bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1093:17514..28471- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1093:17514..28471- >mRNA_H-canaliculatus_F_contig1093.866.1 ID=mRNA_H-canaliculatus_F_contig1093.866.1|Name=mRNA_H-canaliculatus_F_contig1093.866.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4788bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1093:17514..28471- (Hapterophycus canaliculatus Oshoro5f female)back to top |