mRNA_H-canaliculatus_F_contig10910.850.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10910.850.1 vs. uniprot
Match: A0A6H5K3H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H5_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.010e-51 Identity = 88/146 (60.27%), Postives = 109/146 (74.66%), Query Frame = 1 Query: 1 DCCGAAADAVSCVMAAHGFRVTTNDLNPMLMADSHMDAATDEFCDAFRVESRRPDWVVSSPPYKNAFAILKQALRIGRVGVAFKLRLTFLEPTKTRGRWLRANPPDMIVVLARATYRGRKCSSTEAWFVWKKAQAERDFHKPAFFF 438 D CG+A+DA+ V+ AH V+TND NP L AD+H+DA ++EF F E +RPDW+V+SPPY NAF+IL +AL + RVGVAFKLRL+FLEPTKTRG+WL+ NPP +VVL RATY GR CSSTEAWF+W A + AFFF Sbjct: 30 DACGSASDAIKVVLEAHSLNVSTNDFNPRLTADTHLDATSEEFTAMFSTEGQRPDWIVTSPPYGNAFSILVRALGVVRVGVAFKLRLSFLEPTKTRGKWLKDNPPSAVVVLPRATYCGRVCSSTEAWFIWHLASDGVERPGQAFFF 175
BLAST of mRNA_H-canaliculatus_F_contig10910.850.1 vs. uniprot
Match: A0A6H5K6T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6T5_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 8.810e-19 Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 1 Query: 235 VGVAFKLRLTFLEPTKTRGRWLRANPPDMIVVLARATYRGRKCSSTEAWFVWK 393 +GVAFKLRLTFL P K+RGRWL+ NPPD IV+L RATYR R+CSSTE WFVW+ Sbjct: 1 MGVAFKLRLTFLGPAKSRGRWLKDNPPDRIVMLPRATYRRRRCSSTETWFVWE 53
BLAST of mRNA_H-canaliculatus_F_contig10910.850.1 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 4.400e-18 Identity = 51/131 (38.93%), Postives = 75/131 (57.25%), Query Frame = 1 Query: 7 CGAAADAVSCVMAAHGFRVTTNDLNPMLMADSHMDAATDEFCDAFRV--ESRRPDWVVSSPPYKNAFAILKQALRIGRVGVAFKLRLTFLEPTKTRGRWLRANPPDMIVVLARATY-RGRKCSSTEAWFVW 390 CG DAV+ + + + TND++ AD++++A+ + F + F +RP+WVV+SPPY A +K A+ + GVAFK+ + FLEP RG WL+ NPP + V L RA Y R + E W VW Sbjct: 2 CGGPTDAVATRLRST-CEILTNDVSSGRPADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWLQTNPPSVCVFLRRAKYTRANNAKTGEFWGVW 131
BLAST of mRNA_H-canaliculatus_F_contig10910.850.1 vs. uniprot
Match: A0A6H5KU02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU02_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 1.220e-14 Identity = 47/122 (38.52%), Postives = 65/122 (53.28%), Query Frame = 1 Query: 34 CVMAAHGFRVTTNDLNPMLMADSHMDAATDEFCDAFRV--ESRRPDWVVSSPPYKNAFAILKQALRIGRVGVAFKLRLTFLEPTKTRGRWLRANPPDMIVVLARATY-RGRKCSSTEAWFVW 390 C A RV T P AD+++DA+ + F + F +RP+WVV+SPPY A +K A+ + GV FK+ ++ LEP RG WL+ NPP + + L RA Y R E W VW Sbjct: 120 CFYAEQNTRVRTMRRRP---ADTNLDASLESFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVEFKMPISCLEPCADRGGWLQTNPPSVCLFLRRAKYTRANNAKMGEFWGVW 238
BLAST of mRNA_H-canaliculatus_F_contig10910.850.1 vs. uniprot
Match: A0A252D8B1_9NOSO (Uncharacterized protein n=1 Tax=Nostoc sp. RF31YmG TaxID=1932668 RepID=A0A252D8B1_9NOSO) HSP 1 Score: 82.0 bits (201), Expect = 1.540e-14 Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 52 GFRVTTNDLNPMLMADSHMDAATDEFCDAFRVESRRPDWVVSSPPYKNAFAILKQALRIGRVGVAFKLRLTFLEPTKTRGRWLRANPPDMIVVLARATYRG--RKCSSTEAWFVWKKAQAERD 414 G V T D+ AD+ D AT + + DWVV++PP+ +A IL +A VGVAF LRL++LEP K RG+WL +PP +IV L R ++ G + S T AW +WKK + D Sbjct: 57 GLSVITTDI-----ADNPQDDATTH---QYWQRQKPYDWVVTNPPFDSASKILPKAYEYASVGVAFLLRLSYLEPCKDRGQWLAEHPPKLIV-LPRISFTGDGKVDSCTCAWMIWKKGYSSED 170
BLAST of mRNA_H-canaliculatus_F_contig10910.850.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 2.150e-14 Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 1 DCCGAAADAVSCVMAAHGFRVTTNDLNPMLMA-----DSHMDAATDEFCDAFRVES--RRPDWVVSSPPYKNAFAILKQALRIGRVGVAFKLRLTFLEPTKTRGRWLRANPPDMIV 327 D CG DA++ + A +V TND++ L D+++DA+ F F + +RPDWV++SPPYK A +K AL + GVA KL L+FLEP RG WL+ANPP + V Sbjct: 105 DMCGGPGDAIATRLGAT-CKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCV 219
BLAST of mRNA_H-canaliculatus_F_contig10910.850.1 vs. uniprot
Match: A0A6H5L6X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6X2_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 8.140e-13 Identity = 45/75 (60.00%), Postives = 53/75 (70.67%), Query Frame = -3 Query: 105 TTIMSGGLALNHRPLVFVGSRNVSLSLNATPTRPMRNACFKMAKAFL*GGLDTTQSGRLDSTRNASQNSSVAASM 329 TT ++ L+H PLV VGSR VSLSLNATPTRP+ A FK+AKA L GGL TT SGR S++ S N SV AS+ Sbjct: 162 TTPVAEAKHLSHCPLVLVGSRKVSLSLNATPTRPILKARFKIAKACLYGGLVTTHSGRRPSSQKVSTNVSVVASI 236
BLAST of mRNA_H-canaliculatus_F_contig10910.850.1 vs. uniprot
Match: A0A843RVX0_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Luteitalea sp. TaxID=2004800 RepID=A0A843RVX0_9BACT) HSP 1 Score: 74.7 bits (182), Expect = 5.520e-12 Identity = 49/120 (40.83%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 46 AHGFRVTTNDLNPMLMADSHMDAATDEFC-DAFRVESRRPDWVVSSPPYKNAFAILKQALRIGRVGVAFKLRLTFLEPTKTRGRWLRANPPDMIVVLARATYRGR--KCSSTEAWFVWKK 396 A GF + +NDL+P D+H+DAA E+ D RP W V++ P+ A AI+ A++ A LRL++LEPT R R+L ANPP ++V+ R ++GR S T AWFVW++ Sbjct: 60 ATGF-IESNDLDPATPTDTHLDAARSEYWRDIAGRTHNRPYWGVTNVPFDLADAIVPLAVQTLPC-FATILRLSWLEPTAARQRFLSANPPRTVIVMPRHDFKGRGQTDSVTSAWFVWEQ 177
BLAST of mRNA_H-canaliculatus_F_contig10910.850.1 vs. uniprot
Match: A0A1V5ZCZ4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin179 TaxID=1852849 RepID=A0A1V5ZCZ4_9BACT) HSP 1 Score: 69.3 bits (168), Expect = 6.880e-10 Identity = 52/142 (36.62%), Postives = 73/142 (51.41%), Query Frame = 1 Query: 13 AAADAVSCVMAAHGFRVTTNDLNPMLMADSHMDAATDEFCDAFRVESRRPDWVVSSPPYKNAFAILKQALRIGRVGVAFKLRLTFLEPTKTRGRWLRANPPDMIVVLA---RATYR--------GRKCSS---TEAWFVWKK 396 A A ++ +A +G + TND++P D DA TD F + + DWVV++PP+ A IL A+ RVGVAF LRL+++EP TR WL MI A R +R G+K + T AWFVW++ Sbjct: 36 AGAGQIARALAGNGRTIFTNDIDPNHGCDFASDA-TDPFAFCWGLYGGI-DWVVTNPPFSLAEDILANAMSYARVGVAFLLRLSYMEPVTTRAAWLNGYADKMIYQGALNPRPHFRKGEINPKTGKKYGTDNVTVAWFVWRR 175
BLAST of mRNA_H-canaliculatus_F_contig10910.850.1 vs. uniprot
Match: UPI001E591ED4 (hypothetical protein n=1 Tax=Nostoc favosum TaxID=2907819 RepID=UPI001E591ED4) HSP 1 Score: 68.9 bits (167), Expect = 1.060e-9 Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 67 TNDLNPMLMADSHMDAATDEFCDAFRVESRRPDWVVSSPPYKN-AFAILKQALRIGRVGVAFKLRLTFLEPTKTRGRWLRANPPDMIVVLARATYRGRKCSS-------TEAWFVWKKA 399 TND++P L AD H+DA + F DW+ ++PPY A I+K A + RVGVA L +FLEP R +L+ +PP +++++ R +R K S T + FVW K+ Sbjct: 49 TNDIDPHLAADYHLDATLSDSWAKFP----DCDWICTNPPYSEFAAPIIKNAYQKARVGVAAFLLTSFLEPCDDRADFLQQHPPSLVIIMPRFCFRKDKRGSRWATDNVTISCFVWDKS 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10910.850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10910.850.1 >prot_H-canaliculatus_F_contig10910.850.1 ID=prot_H-canaliculatus_F_contig10910.850.1|Name=mRNA_H-canaliculatus_F_contig10910.850.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=137bp MAAHGFRVTTNDLNPMLMADSHMDAATDEFCDAFRVESRRPDWVVSSPPYback to top mRNA from alignment at H-canaliculatus_F_contig10910:1125..2845+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10910.850.1 ID=mRNA_H-canaliculatus_F_contig10910.850.1|Name=mRNA_H-canaliculatus_F_contig10910.850.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1721bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10910:1125..2845+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10910:1125..2845+ >mRNA_H-canaliculatus_F_contig10910.850.1 ID=mRNA_H-canaliculatus_F_contig10910.850.1|Name=mRNA_H-canaliculatus_F_contig10910.850.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=822bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10910:1125..2845+ (Hapterophycus canaliculatus Oshoro5f female)back to top |