mRNA_H-canaliculatus_F_contig10858.804.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10858.804.1
Unique NamemRNA_H-canaliculatus_F_contig10858.804.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10858.804.1 vs. uniprot
Match: D8LRZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ0_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 3.900e-96
Identity = 176/280 (62.86%), Postives = 203/280 (72.50%), Query Frame = 1 
Query:    1 GGGVEAQAVEEVSRENCRERAGDVFSRRPAPNALPADWVVRSFLASYNTEALYAEHDSI-AANPRDPLDDICGGD-EERHRVTAAASFWEGLSLAREGKYTESIDRFSSAAAAATTLDTXXXXAXXXGS-DTTGALTEGARIQSLALEYYGSFLYLLGDMDAALEHLSRAGEVDPNNAKSWVKRGSVLNDLGRREEATISKLGAPMFVQAIECFESAQAIDPRDSDLFLHR-QGHLLANDYRKAAADLRRSVELCPTMPISRAAWGVALFKLATADELVS 828
            G G EAQA+E+VSRE+CR RAG+ FS+R APNALPADWVVRSFL SY+T+ LY EHD++   +  DP+      + +E  +  A   FW+GLSL REGKY ESI +FSS+ +A ++           G+ DTT       RIQSLALEY GSFLYL+GDM+ ALEHL  AGEVD  NAKSWVKRGSVL+DLGRREEA              ECF++A AI PRDSDLFLHR QGHLLAND+RKA ADLRRSVELCPTMPISRAAWGVALFKLATA EL S
Sbjct:  503 GDGSEAQAIEDVSRESCRARAGEEFSQRAAPNALPADWVVRSFLTSYDTKGLYEEHDAVFRLHGEDPVAAAAAAEGDEGGQAAAVTEFWQGLSLVREGKYAESIAKFSSSVSAFSSSAPVAVLGEGTGAGDTT-------RIQSLALEYCGSFLYLMGDMNTALEHLRLAGEVDETNAKSWVKRGSVLSDLGRREEA-------------FECFDAAAAIAPRDSDLFLHRGQGHLLANDFRKATADLRRSVELCPTMPISRAAWGVALFKLATAAELPS 762
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BLAST of mRNA_H-canaliculatus_F_contig10858.804.1 vs. uniprot
Match: A0A1X2GK15_9FUNG (TPR-like protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GK15_9FUNG)

HSP 1 Score: 74.3 bits (181), Expect = 2.620e-11
Identity = 44/138 (31.88%), Postives = 72/138 (52.17%), Query Frame = 1 
Query:  418 QSLALEYYGSFLYLLGDMDAALEHLSRAGEVDPNNAKSWVKRGSVL---NDLGRREEATISKLGAPMFVQAIECFESAQAIDPRDSDLFLHR-QGHLLANDYRKAAADLRRSVELCPTMPISRAAWGVALFKLATADE 819
            Q+ AL   G+F++L+GD   AL++L++A E DP   +S++KR S+     D+G                 A + FE+A +++P D D+F HR Q   ++ DY  AA D   SV+L  T   +    GV  +K+ +  +
Sbjct:  310 QAYALNLKGTFVFLMGDSQGALDYLNKAIEADPKYVQSYIKRSSIYIEQQDIG----------------SAFKDFETAISVNPNDPDVFYHRGQIRYISGDYESAANDYSESVDLDDTFVFAHVQLGVVQYKMGSISK 431
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BLAST of mRNA_H-canaliculatus_F_contig10858.804.1 vs. uniprot
Match: A0A3N4KSB5_9PEZI (Mitochondrial protein n=3 Tax=Morchella TaxID=5193 RepID=A0A3N4KSB5_9PEZI)

HSP 1 Score: 67.8 bits (164), Expect = 4.120e-9
Identity = 42/140 (30.00%), Postives = 74/140 (52.86%), Query Frame = 1 
Query:  394 ALTEGARIQSLALEYYGSFLYLLGDMDAALEHLSRAGEVDPNNAKSWVKRGSVLNDLGRREEATISKLGAPMFVQAIECFESAQAIDPRDSDLFLHR-QGHLLANDYRKAAADLRRSVELCPTMPISRAAWGVALFKLAT 810
            A+  G   ++ AL + G+F YL GD   ALE +S++ ++D    +S++KR S+L +LG RE A++              F +A   +  D D++ HR Q H +  ++ +AA D ++S++L      S    GV  +K+ +
Sbjct:  316 AMQLGTNFEAYALNWRGTFKYLRGDPMEALEDVSKSIQLDNTMTQSYIKRASMLLELGDREGASMD-------------FTTALEKNSEDPDIYYHRAQLHFILGEFGEAAKDYQKSIDLDRDFIFSHIQLGVTQYKMGS 442
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BLAST of mRNA_H-canaliculatus_F_contig10858.804.1 vs. uniprot
Match: A0A150UZB0_9PEZI (Uncharacterized protein n=1 Tax=Acidomyces richmondensis BFW TaxID=766039 RepID=A0A150UZB0_9PEZI)

HSP 1 Score: 67.8 bits (164), Expect = 4.130e-9
Identity = 43/139 (30.94%), Postives = 70/139 (50.36%), Query Frame = 1 
Query:  397 LTEGARIQSLALEYYGSFLYLLGDMDAALEHLSRAGEVDPNNAKSWVKRGSVLNDLGRREEATISKLGAPMFVQAIECFESAQAIDPRDSDLFLHR-QGHLLANDYRKAAADLRRSVELCPTMPISRAAWGVALFKLAT 810
            L +    ++ A    G+F YL GD DAAL  L+++ E+DP   +S+VKR S+  +  +R EA                FE A   +  D D++ HR Q H + +++  AA D ++S++L P    S    GV  +K+ +
Sbjct:  308 LNDLGNYEAFAYNMRGTFRYLKGDNDAALNDLNKSLELDPALVQSYVKRASMHLEQSKRAEAAHD-------------FELAMKHNSEDPDIYYHRAQLHFILSEFSLAATDYQKSIDLDPKFIFSHIQLGVTQYKMGS 433
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BLAST of mRNA_H-canaliculatus_F_contig10858.804.1 vs. uniprot
Match: A0A642V3E6_9ASCO (Uncharacterized protein n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642V3E6_9ASCO)

HSP 1 Score: 67.0 bits (162), Expect = 7.460e-9
Identity = 45/146 (30.82%), Postives = 70/146 (47.95%), Query Frame = 1 
Query:  394 ALTEGARIQSLALEYYGSFLYLLGDMDAALEHLSRAGEVDPNNAKSWVKRGSVLNDLGRREEATISKLGAPMFVQAIECFESAQAIDPRDSDLFLHR-QGHLLANDYRKAAADLRRSVELCPTMPISRAAWGVALFKLATADELVS 828
            A+   A   +LALEY G+F +L+ DM+ AL  + ++   +P+   +++KR S+  + G    A +              F+SA  ID   SD+F HR Q   L ND+  A  D  RSVEL P    S     V  +++ +    +S
Sbjct:  316 AVENNASNLALALEYTGTFKFLINDMEGALNDIEKSIAAEPS-VYAYIKRSSIHMEQGSITSANLD-------------FDSALRIDQNASDVFYHRAQVAFLTNDFNSAIKDYERSVELNPDFMYSHIQLAVTHYRMGSIQTAIS 447
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BLAST of mRNA_H-canaliculatus_F_contig10858.804.1 vs. uniprot
Match: A0A292PHG7_9PEZI (Uncharacterized protein n=1 Tax=Tuber aestivum TaxID=59557 RepID=A0A292PHG7_9PEZI)

HSP 1 Score: 67.0 bits (162), Expect = 8.110e-9
Identity = 45/132 (34.09%), Postives = 74/132 (56.06%), Query Frame = 1 
Query:  418 QSLALEYYGSFLYLLGDMDAALEHLSRAGEVDPNNAKSWVKRGSVLNDLGRREEATISKLGAPMFVQAIECFESAQAIDPRDSDLFLHR-QGHLLANDYRKAAADLRRSVELCPTMPISRAAWGVALFKLAT 810
            ++ AL + G+F YL GD   AL+ L+ + E+DP   +S++KR S+L +LG RE A      A  F  A+E      A DP   D++ HR Q H + +++ +AA D ++S++L  +   S    GV  +K+ +
Sbjct:  321 EAYALNWRGTFKYLQGDAVEALKDLNSSIELDPTMTQSYIKRASMLLELGDREAA------AADFATALE----HNADDP---DIYYHRAQLHFILSEFAEAAKDYQKSIDLDRSFIFSHIQLGVTQYKMGS 439
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BLAST of mRNA_H-canaliculatus_F_contig10858.804.1 vs. uniprot
Match: D5GDH5_TUBMM (Uncharacterized protein n=4 Tax=Tuberaceae TaxID=40289 RepID=D5GDH5_TUBMM)

HSP 1 Score: 66.6 bits (161), Expect = 9.990e-9
Identity = 44/132 (33.33%), Postives = 74/132 (56.06%), Query Frame = 1 
Query:  418 QSLALEYYGSFLYLLGDMDAALEHLSRAGEVDPNNAKSWVKRGSVLNDLGRREEATISKLGAPMFVQAIECFESAQAIDPRDSDLFLHR-QGHLLANDYRKAAADLRRSVELCPTMPISRAAWGVALFKLAT 810
            ++ AL + G+F YL GD   AL+ L+ + E+DP   +S++KR S+L ++G RE A      A  F  A+E      A DP   D++ HR Q H + +++ +AA D ++S++L  +   S    GV  +K+ +
Sbjct:  321 EAYALNWRGTFKYLRGDAAEALKDLNGSIELDPTMTQSYIKRASMLLEIGNREGA------AADFATALE----HNADDP---DIYYHRAQLHFILSEFAEAAKDYQKSIDLDHSFIFSHIQLGVTQYKMGS 439
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10858.804.1 vs. uniprot
Match: A0A6J3MCI6_9PEZI (TPR-like protein n=1 Tax=Dissoconium aciculare CBS 342.82 TaxID=1314786 RepID=A0A6J3MCI6_9PEZI)

HSP 1 Score: 66.2 bits (160), Expect = 1.360e-8
Identity = 41/132 (31.06%), Postives = 70/132 (53.03%), Query Frame = 1 
Query:  418 QSLALEYYGSFLYLLGDMDAALEHLSRAGEVDPNNAKSWVKRGSVLNDLGRREEATISKLGAPMFVQAIECFESAQAIDPRDSDLFLHR-QGHLLANDYRKAAADLRRSVELCPTMPISRAAWGVALFKLAT 810
            ++LA    G+F YL G+ + ALE L+++ E+D    +S+VKR S+  + G RE A                FE A + +P D D++ HR Q H + +++  AA D ++S++L  +   S    GV  +K+ +
Sbjct:  330 EALAYNMRGTFRYLKGEAEGALEDLNKSIELDKTMVQSYVKRASMHLEGGARENAAND-------------FELANSHNPDDPDIYYHRAQLHFILSEFSLAATDYQKSIDLDTSFIFSHIQLGVTQYKMGS 448
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BLAST of mRNA_H-canaliculatus_F_contig10858.804.1 vs. uniprot
Match: A0A3N4HMV2_ASCIM (Mitochondrial proteins import receptor n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4HMV2_ASCIM)

HSP 1 Score: 65.9 bits (159), Expect = 1.840e-8
Identity = 41/131 (31.30%), Postives = 73/131 (55.73%), Query Frame = 1 
Query:  421 SLALEYYGSFLYLLGDMDAALEHLSRAGEVDPNNAKSWVKRGSVLNDLGRREEATISKLGAPMFVQAIECFESAQAIDPRDSDLFLHR-QGHLLANDYRKAAADLRRSVELCPTMPISRAAWGVALFKLAT 810
            +LA  + G+F YL G+ DAALE L+++ E+DP+  +S++K+ S+  +LG RE A+               F+ A   +  D D++ +R Q + +A ++  AA D ++S++L P    S    GV  +K+ +
Sbjct:  356 ALAYNWRGTFSYLRGNSDAALEDLAKSIELDPSLTQSYIKQASMRLELGDREGASRD-------------FDLALQQNKDDPDIYYYRAQLYFIAGEFGDAAKDYQQSIDLDPDFIFSHIQLGVTQYKMGS 473
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10858.804.1 vs. uniprot
Match: A0A8H7C0G2_9FUNG (TOM (Translocase of outer membrane) complex component n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7C0G2_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 2.530e-7
Identity = 45/149 (30.20%), Postives = 71/149 (47.65%), Query Frame = 1 
Query:  418 QSLALEYYGSFLYLLGDMDAALEHLSRAGEVDPNNAKSWVKRGSVLNDLGRREEATISKLGAPMFVQAIECFESAQAIDPRDSDLFLHR-QGHLL-----------------ANDYRKAAADLRRSVELCPTMPISRAAWGVALFKLAT 810
            Q+LAL  YG+F++L G+   ALE+ ++A E DP   +S++KR S+  + G            P      + FE A AI+P D D++ HR QG L+                 + +Y  AA D   S++L  +   +    GV  +KL +
Sbjct:  304 QALALNMYGTFVFLKGNTKDALEYFNKAIEADPKFVQSYIKRSSIFMEQG----------DVP---STFKQFEEAIAINPSDPDIYYHRGQGVLITMKDAKSVLTKSLVNYISGNYDAAAKDYSESIKLDDSFVYAHIQLGVVQYKLGS 439
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10858.804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LRZ0_ECTSI3.900e-9662.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1X2GK15_9FUNG2.620e-1131.88TPR-like protein n=1 Tax=Hesseltinella vesiculosa ... [more]
A0A3N4KSB5_9PEZI4.120e-930.00Mitochondrial protein n=3 Tax=Morchella TaxID=5193... [more]
A0A150UZB0_9PEZI4.130e-930.94Uncharacterized protein n=1 Tax=Acidomyces richmon... [more]
A0A642V3E6_9ASCO7.460e-930.82Uncharacterized protein n=1 Tax=Trichomonascus cif... [more]
A0A292PHG7_9PEZI8.110e-934.09Uncharacterized protein n=1 Tax=Tuber aestivum Tax... [more]
D5GDH5_TUBMM9.990e-933.33Uncharacterized protein n=4 Tax=Tuberaceae TaxID=4... [more]
A0A6J3MCI6_9PEZI1.360e-831.06TPR-like protein n=1 Tax=Dissoconium aciculare CBS... [more]
A0A3N4HMV2_ASCIM1.840e-831.30Mitochondrial proteins import receptor n=1 Tax=Asc... [more]
A0A8H7C0G2_9FUNG2.530e-730.20TOM (Translocase of outer membrane) complex compon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10858contigH-canaliculatus_F_contig10858:115..4550 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score314.3
Seed ortholog evalue5.7e-83
Seed eggNOG ortholog2880.D8LRZ0
Preferred nameTOMM70A
KEGG koko:K00738,ko:K17768
KEGG TC3.A.8.1
KEGG ReactionR05987
KEGG Pathwayko00510,ko00513,ko01100,map00510,map00513,map01100
KEGG ModuleM00075
GOsGO:0001101,GO:0001558,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005742,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0010611,GO:0010614,GO:0010721,GO:0014070,GO:0014741,GO:0014743,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016202,GO:0017038,GO:0019867,GO:0022804,GO:0022857,GO:0022884,GO:0030150,GO:0030308,GO:0030943,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031306,GO:0031307,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032592,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0040008,GO:0042221,GO:0042277,GO:0042493,GO:0042886,GO:0042887,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043502,GO:0044057,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0045595,GO:0045596,GO:0045843,GO:0045926,GO:0046620,GO:0046621,GO:0046907,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048634,GO:0048635,GO:0048638,GO:0048640,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051093,GO:0051128,GO:0051147,GO:0051148,GO:0051153,GO:0051154,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051241,GO:0051641,GO:0051649,GO:0055021,GO:0055022,GO:0055024,GO:0055026,GO:0055085,GO:0060284,GO:0060420,GO:0061024,GO:0061050,GO:0061052,GO:0061117,GO:0065002,GO:0065007,GO:0070201,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0072657,GO:0090087,GO:0090150,GO:0090151,GO:0090257,GO:0097066,GO:0097068,GO:0098573,GO:0098588,GO:0098796,GO:0098798,GO:0098799,GO:0098805,GO:1901698,GO:1901700,GO:1901861,GO:1901862,GO:1904386,GO:1904589,GO:1904591,GO:1904680,GO:1904951,GO:1905207,GO:1905208,GO:1990542,GO:2000026,GO:2000725,GO:2000726
EggNOG free text desc.protein transmembrane transport
EggNOG OGsKOG0547@1,KOG0547@2759
EC2.4.1.145
COG Functional cat.S
CAZyGT54
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000,ko03029
Hectar predicted targeting categoryother localisation
Exons7
Model size843
Cds size843
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928753.1325655-CDS-H-canaliculatus_F_contig10858:114..2701622928753.1325655-CDS-H-canaliculatus_F_contig10858:114..270Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 115..270 -
1696845551.2085013-CDS-H-canaliculatus_F_contig10858:114..2701696845551.2085013-CDS-H-canaliculatus_F_contig10858:114..270Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 115..270 -
1622928753.1474438-CDS-H-canaliculatus_F_contig10858:1163..12671622928753.1474438-CDS-H-canaliculatus_F_contig10858:1163..1267Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 1164..1267 -
1696845551.2199686-CDS-H-canaliculatus_F_contig10858:1163..12671696845551.2199686-CDS-H-canaliculatus_F_contig10858:1163..1267Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 1164..1267 -
1622928753.1581323-CDS-H-canaliculatus_F_contig10858:1631..17201622928753.1581323-CDS-H-canaliculatus_F_contig10858:1631..1720Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 1632..1720 -
1696845551.2339625-CDS-H-canaliculatus_F_contig10858:1631..17201696845551.2339625-CDS-H-canaliculatus_F_contig10858:1631..1720Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 1632..1720 -
1622928753.1786702-CDS-H-canaliculatus_F_contig10858:2434..27031622928753.1786702-CDS-H-canaliculatus_F_contig10858:2434..2703Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 2435..2703 -
1696845551.2454638-CDS-H-canaliculatus_F_contig10858:2434..27031696845551.2454638-CDS-H-canaliculatus_F_contig10858:2434..2703Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 2435..2703 -
1622928753.202513-CDS-H-canaliculatus_F_contig10858:2763..28381622928753.202513-CDS-H-canaliculatus_F_contig10858:2763..2838Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 2764..2838 -
1696845551.255154-CDS-H-canaliculatus_F_contig10858:2763..28381696845551.255154-CDS-H-canaliculatus_F_contig10858:2763..2838Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 2764..2838 -
1622928753.22462-CDS-H-canaliculatus_F_contig10858:3478..35631622928753.22462-CDS-H-canaliculatus_F_contig10858:3478..3563Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 3479..3563 -
1696845551.2666848-CDS-H-canaliculatus_F_contig10858:3478..35631696845551.2666848-CDS-H-canaliculatus_F_contig10858:3478..3563Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 3479..3563 -
1622928753.2433286-CDS-H-canaliculatus_F_contig10858:4485..45501622928753.2433286-CDS-H-canaliculatus_F_contig10858:4485..4550Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 4486..4550 -
1696845551.2817473-CDS-H-canaliculatus_F_contig10858:4485..45501696845551.2817473-CDS-H-canaliculatus_F_contig10858:4485..4550Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10858 4486..4550 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10858.804.1prot_H-canaliculatus_F_contig10858.804.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10858 115..4550 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10858.804.1

>prot_H-canaliculatus_F_contig10858.804.1 ID=prot_H-canaliculatus_F_contig10858.804.1|Name=mRNA_H-canaliculatus_F_contig10858.804.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=281bp
GGGVEAQAVEEVSRENCRERAGDVFSRRPAPNALPADWVVRSFLASYNTE
ALYAEHDSIAANPRDPLDDICGGDEERHRVTAAASFWEGLSLAREGKYTE
SIDRFSSAAAAATTLDTTTTTATTTGSDTTGALTEGARIQSLALEYYGSF
LYLLGDMDAALEHLSRAGEVDPNNAKSWVKRGSVLNDLGRREEATISKLG
APMFVQAIECFESAQAIDPRDSDLFLHRQGHLLANDYRKAAADLRRSVEL
CPTMPISRAAWGVALFKLATADELVSEKEW*
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mRNA from alignment at H-canaliculatus_F_contig10858:115..4550-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10858.804.1 ID=mRNA_H-canaliculatus_F_contig10858.804.1|Name=mRNA_H-canaliculatus_F_contig10858.804.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4436bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10858:115..4550- (Hapterophycus canaliculatus Oshoro5f female)
GGGGGCGGGGTTGAAGCCCAGGCGGTCGAGGAGGTCTCAAGAGAGAACTG
CAGGGAACGGGCGGGGTGAGCGATGGGAGCGGTCGGAGTGTGAATCTGAA
CGAGCGAGAACGATGGAGCACTTGTTCCTTTTTGTTGTTCCGTTTCGTGA
ATGCGTTTCGTGGTTGCGTTTCATGATTTCGTTCCGTTTTTCTCCCCGCC
TGCCCCCCCCCCCCGAGTTTGTGCCTTCTCCTCCGATTGTTACGATTGGA
GATCATCCGGAAGTAGCGCGAACGGCGGTTGGAATAGATGGGGTAGCCGA
GAAGCGTGAGCAGGAGTCTCCTTGGCTTTTTGTTTTTGGTGTGGTGCATC
GAGGGGGTGCGCTGGGCGTTGCAAGGCCGCCGCGGGTCACTTGCTGAGAA
CGAGAGCTCAGGAGCGAATACACGCACCGGGTCCTCGTGTGCAATGCTTC
TATGCACACATTTGACTGATCCTGTGTTCGGCTTCGGTTGTTCAACGCCG
TGAAGTGCGCGTCGAACTTTGTTCCCTTGCCATCGGCGCCAAGGCCTTGA
TGTCACAGATCGCCCAAGCATTCCGAAACCCATTTGTGCCCGACACGATG
CCTGTACAGGTTCGGTGCGGATTCGTTCTTGTAAGCCGTGGGTCGTAGCT
CTCCATTTAACAACTTTAGGTGTTGGAAAGTTGGGGTCACGGGGGCTTTC
CCCGCTTGCTTCGCGCACTCCCAACGCGCGAGGCCTCCCGTCGCTCCATG
TTTGTGGTAAGCAGCTGAGGGGCGGTTTCCGTGACCGCGTGGCAGGTTTG
GTGGCGCTCTTCCAACCTCCGGCCCCCCACGCCGCACACTTTTTAATCGC
CGCTCCTCCGGACGTCGGGAGCCGCTTCCCATCTTCCGTCCGATGGCATG
CCCCTCCCCCATTCTCAGTTGGTGGTGGCTGATCCTTACCGCCGACCCCC
CCCTCCCCCCTCGCCGCACGTGCCGACTCTTCTGCAGGGACGTATTTTCG
CGAAGGCCAGCCCCCAATGCCTTGCCTGCCGACTGGGTTGTGCGGAGCTT
CTTGGCGTCGTACAACACGGAGGTGATGGTTGCGACTGAACGCTTGGGTT
TCCCTAACACGCGCGACTGACCCCCACGTTTCGCCTCTCGTCGCGATTCC
TTCTGCCTTTGTTGGTGTCCACGTTGTCGCTGTTTTGTCGCTTGTGGCTC
TTGTCGGTGAGGTTCTTGCAGCAGCAGCTGCTGCTCTGAAACCGTGCAGG
TTGCTGTTGTTGCTCCTTCTCTCACCTCTCTCATTGCACTTTATGTGTCC
GCAGTATGTGACTTGAATAGGAACGACGCCCCTTGCACGCGCGATATCGC
CTTGGTCGTTTCCTCCAGCTCACGAGAATGGGCAGCCCGTCCAGTCGTTA
GACTCCGGCGATCCATGCCTGCTTGTGGTAATTTTTTTCTCAGGCATGTT
TGTCTAGAACTTCTGTTTCCACAAAAAGGTCCATACGTGATAGAAAACTG
CGCCGGGATGAACGCCACGCATTCATCTACTCCCCAGGGACATGCAAAGC
TCAGTACCCCCGTTCAGCACCCCCTCCAGGATATTTCCACCTCAAAGGTA
ACGTACAGAATGCGGCGAATCAAAGCGCCCCTCCAAACGCGCTTCCGTCT
GTTGCCCTTCGGGGTGTTACTGGTTATCCCTTCCGTCTGCTGGCTTTCCG
AAAACGCGAAAGGCTCTGTACGCCGAGCACGACAGCATCGCTGCGAATCC
CCGGGACCCCCTAGACGATATTTGCGGCGGTGACGAGGTAGATAGTTCTC
CACAGGAGGATGACGGGGTGCGGCCAGGAGGGGAGGGAGGGCACGAGGAA
CGACATCGGGTTACGGCAGCAGCGTCGTTCTGGGAAGGCTTGAGCCTCGC
GAGGGAAGGGAAGTACACCGAGAGCATCGACAGGTTTTCTTCCGCTGCCG
CTGCTGCTACTACTCTGGACACGACGACGACGACAGCAACCACAACAGGG
AGTGACACGACGGGTGCTCTGACGGAAGGTGCCAGGATTCAGTCTCTGGC
GTTGGAGTACTACGGCTCGTTCCTGTACCTGCTGGGGGACATGGACGCTG
CCTTGGAGCACCTCAGGTGGGCGGGGTCAAAAGCCTTGTGCTTCTTGTTT
GCTCGTCGGCTTCGCTTCTGCTGCCGTCCTTTCTGCTGTTGTTACCGTTG
CTGGTATCGGTGCGGTCGCTTTTGGTGTCCTCTTTGTTGTTGATGGTGGG
ATTGCTGTTATTGCGTCCGACATTGGTGCTTCTGCCTTTTTGCTGGTTTG
TTTACTAGAGCGTTTGTGCTCCTCGCCCTGTATGTTGCGAACCAATCTCT
GGCCACGGCTTCCTCCACCCTATCGTTTTTTAGGCTCGAAGCCTAACGTC
TCGAAACCCTTTGGGCTCAACACAAATGTCGGTGCAATGTGCCGGCGTGG
CGGCAGACCGTTTCATGCGACGAAAACCTCGTGAGACATTTGTCCCCGTC
CCATTTCGTGTTTTTCGGGCGTGCGATATGTGCGCTTCAAAAACAAGTGC
GACCCTCGAGCACAGGTGTCTTGCCTTTCATCCAGCTAGAAGCACAGGTG
TCTTGGCCAAGCCGACTAGTAGTAGCCCATCGGCCGCCGTCTTGTCCTGA
GACCTGACGGGCGTTGTCTGCCGTGTATGTATGTTGTTTGCGTCTGTGTG
CTTGAGAGGCTTCGTCTGGGCCTGTGTGCCTCTCTGTTGTCTGTCCGAGT
CTACGTCTGGGCCTGTCCCCAGGTTCGAATCATTGTTTCTCGCACGTTTT
CACTAAGTCGAGCACGGTCATGTACAACAGTCGCGCAGGTGAGGTCGACC
CCAACAACGCCAAGAGCTGGGTCAAGAGGGGGAGCGTCCTTAACGACCTG
GGTCGGCGGGAGGAGGCGAGTCAATAACCGTGTTCAACCGGCTTATTGTT
CACCCGGCCGCCGCCCCCGCCGCCGCCGCTGCTGCTGCTGCTGCTGTTGC
TGTTGCTGCTGTTGTTGTGGTGTTGGAGACTGCTCTCTTGTATGCTCTCT
TGTATACCTACGTCGGATCGTGACAAAATCCGTACTTGGGACGTGCATTT
GCGGTGGTGTTTTCATTTTGAGGGATTTCTCGCGCCCAACGCAGTTCTCG
ATTACAAGGCCAAGTCTAACTGCCGGCTGGCGGGAGAAAACGTTAGATCT
CGTGACGGAATTGATGTTCAGAGAAACAGCAAAATCTTCAACAACAGCGG
TAGCAGCAGCAACAGCCACAGCGACGACGACAGCGATATCGAAACTTGGT
GCTCCAATGTTCGTTCAGGCGATCGAGTGCTTCGAGTCGGCGCAGGCCAT
CGACCCACGCGATTCAGATCTCTTCCTCCACAGGCAAGTGCCGGTGTGCA
GGCTGGTCGGGAAAACTTCGCTTTGATTTTCGTTGCAAAGCACAGAAGAA
CAGAAGTAGACAGGAGCCACGTTTTCCGGCTCTTGGGCTGAACAAAAGTT
ACGTACGTATCTTGGGTGTGGAAGACTCAAAAAACAAAGCCACGCCCTGG
AGTGGTGTGTCGCGAAGTACAACGACAGCGGAGCAGGGCCGCTGCAAACG
TAACAGCCCCTGCCCTCCCGAATCATGTCCCGAACACATCGCGTATCCTA
CGTTAACTCTTGCACACATTACCCCAAAGATGGCCACGAATACGTTTTAA
ACGTATCGAAAAGTTTGGAATCAAAGATCAACTGTAACAGTCGATAACTG
ACTCGAACTTGCACCGCCGTTTCGTGGCTATTTCATGCCGGCGGCTCTAG
GTGGCGACTTTTCTGTGGTCGAGCGCATGCCACATCGCGCACATCCACTA
CAACCGACACATGTCGTAGATCTAGTGGAACCGACACATCGCTGTCATTT
TTCCCCCATCTGCTACGGCCTTCTCCTGGGTACAGAACGAGCCACACACA
TGTCCATTTGAGTTGCTGCTGTTCGGCTCGAGCGACCCTTCCAGGAAATT
TTCGGAGTTGCACATAAACTCTGGGCATCGTTGTTGCCCAAGATTTCTCA
GTAGGCACGTGAGTTGAATCAAGCCACGAGCGTTGTTCGGGGGGCGAGCG
CTCGGAATGCTCTCCGGCGGGTGCCTTCTACAGCGGCAGCAGCGGCCGGT
CCTTCAATCGTCGTGGGAACGGGCTTACCAGGCGAGAACATCATTCGATA
CCGGTGTGCGTTTCTTCGGAGATGTCCCTGAACGTAAGAAACATCAACGG
AACAATCATGTTGGCCGTCGCAGGGGCCAGGGACACCTGCTGGCCAACGA
CTACCGGAAGGCGGCTGCAGACCTGCGGAGGAGCGTAGAGCTCTGTCCGA
CGATGCCCATCTCTAGGGCTGCGTGGGGAGTAGCCCTTTTCAAGCTGGCC
ACGGCTGACGAGCTGGTGAGCGAAAAGGAGTGGTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10858:115..4550-

>mRNA_H-canaliculatus_F_contig10858.804.1 ID=mRNA_H-canaliculatus_F_contig10858.804.1|Name=mRNA_H-canaliculatus_F_contig10858.804.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1686bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10858:115..4550- (Hapterophycus canaliculatus Oshoro5f female)
GGGGGCGGGGTTGAAGCCCAGGCGGTCGAGGAGGTCTCAAGAGAGAACTG
CAGGGAACGGGCGGGGGGGGCGGGGTTGAAGCCCAGGCGGTCGAGGAGGT
CTCAAGAGAGAACTGCAGGGAACGGGCGGGGGACGTATTTTCGCGAAGGC
CAGCCCCCAATGCCTTGCCTGCCGACTGGGTTGTGCGGAGCTTCTTGGCG
TCGTACAACACGGAGGGACGTATTTTCGCGAAGGCCAGCCCCCAATGCCT
TGCCTGCCGACTGGGTTGTGCGGAGCTTCTTGGCGTCGTACAACACGGAG
GCTCTGTACGCCGAGCACGACAGCATCGCTGCGAATCCCCGGGACCCCCT
AGACGATATTTGCGGCGGTGACGAGGCTCTGTACGCCGAGCACGACAGCA
TCGCTGCGAATCCCCGGGACCCCCTAGACGATATTTGCGGCGGTGACGAG
GAACGACATCGGGTTACGGCAGCAGCGTCGTTCTGGGAAGGCTTGAGCCT
CGCGAGGGAAGGGAAGTACACCGAGAGCATCGACAGGTTTTCTTCCGCTG
CCGCTGCTGCTACTACTCTGGACACGACGACGACGACAGCAACCACAACA
GGGAGTGACACGACGGGTGCTCTGACGGAAGGTGCCAGGATTCAGTCTCT
GGCGTTGGAGTACTACGGCTCGTTCCTGTACCTGCTGGGGGACATGGACG
CTGCCTTGGAGCACCTCAGGAACGACATCGGGTTACGGCAGCAGCGTCGT
TCTGGGAAGGCTTGAGCCTCGCGAGGGAAGGGAAGTACACCGAGAGCATC
GACAGGTTTTCTTCCGCTGCCGCTGCTGCTACTACTCTGGACACGACGAC
GACGACAGCAACCACAACAGGGAGTGACACGACGGGTGCTCTGACGGAAG
GTGCCAGGATTCAGTCTCTGGCGTTGGAGTACTACGGCTCGTTCCTGTAC
CTGCTGGGGGACATGGACGCTGCCTTGGAGCACCTCAGTCGCGCAGGTGA
GGTCGACCCCAACAACGCCAAGAGCTGGGTCAAGAGGGGGAGCGTCCTTA
ACGACCTGGGTCGGCGGGAGGAGGCGATCGCGCAGGTGAGGTCGACCCCA
ACAACGCCAAGAGCTGGGTCAAGAGGGGGAGCGTCCTTAACGACCTGGGT
CGGCGGGAGGAGGCGACGATATCGAAACTTGGTGCTCCAATGTTCGTTCA
GGCGATCGAGTGCTTCGAGTCGGCGCAGGCCATCGACCCACGCGATTCAG
ATCTCTTCCTCCACAGGCAACGATATCGAAACTTGGTGCTCCAATGTTCG
TTCAGGCGATCGAGTGCTTCGAGTCGGCGCAGGCCATCGACCCACGCGAT
TCAGATCTCTTCCTCCACAGGCAAGGACACCTGCTGGCCAACGACTACCG
GAAGGCGGCTGCAGACCTGCGGAGGAGCGTAGAGCTCTGTCCGACGATGC
CCATCTCTAGGGCTGCGTGGGGAGTAGCCCTTTTCAAGCTGGCCACGGCT
GACGAGCTGGTGAGCGAAAAGGAGTGGTAAGGACACCTGCTGGCCAACGA
CTACCGGAAGGCGGCTGCAGACCTGCGGAGGAGCGTAGAGCTCTGTCCGA
CGATGCCCATCTCTAGGGCTGCGTGGGGAGTAGCCCTTTTCAAGCTGGCC
ACGGCTGACGAGCTGGTGAGCGAAAAGGAGTGGTAA
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