mRNA_H-canaliculatus_F_contig1085.800.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1085.800.1 vs. uniprot
Match: D7FN77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN77_ECTSI) HSP 1 Score: 701 bits (1808), Expect = 9.570e-237 Identity = 381/554 (68.77%), Postives = 436/554 (78.70%), Query Frame = 1
Query: 205 MHPDIEAELPRADLNKIEEFESKRSGYFADEYRKSSLYWSSLCDVMRDNDGSTQQLLTYVAGKLETDRAYSAAIYANADKIFGDKKGAAKLRHEKIRAAEMKGKAAGNEPSLPEDAMIAGGGGRDAADLPQNSAVQAIWEMTEMDCRAARQRDTLCEEMEAEDRLGTVKAMGKEMHRRFKELSDEGTSCLVSLTNIDKRVGQAFLHLKERLGDQLGGKTLHEDVWLLDCAYRTAAVHQKEAWDAVTAKLKEVFNKMKDLEGERRRVLREFLISTNEGICDSWRKLPALCEPAIAAANAVDASRSAVDREVATTAADGVEEKL--SEKEHELANTSSIVYADPLPSDSSFIDNLTAPLDSPLVRFMTMVERREGKTIGSKYHPGLMVLSWDGFIHFFDMPSGSNVKQDASPSAAFQEISPTISLDDLMSNKKDLDEVLMFKTTHTLQLNDHSLVEAVSSHKSHKIEVSRPSTRATQKRTLLSGHKTVTFRTSTEAEMNHTLAEITDCICVRGGMQDKDGKPNPATMGRQSTGSRSSFGSYHSD---GSSKTPPVE 1851
M P IE ELPRADL K+EEFESKRSGYFADEYRKSS+YWSSLCDVM NDG TQQ+L+YVAGKLE DR +AAI+ NADK+FG+KKGA KLRH+KIR E K K G S+ + ++AGG G++A P NSAV+AIWEM EMDCRAAR RD LC+E+E ED LG VK MGKEM RRFKELS+EGT+CL+SL NIDKRVGQAFLHLKE LGDQ+GGKTLHEDVW L C+Y+TA VHQKEAW+AVTAKL EVF KMKDLEGERR LREF++S N I D+W+K+ L PA AA AVDASR AVD+EV + AA +EEK S KEH LANT+ IV ADP P+D SFI+ L+APL+SPLVR M M+ERREGK IGSKYH GLMVLSWDGF+HFFD+PS S VK+DAS SAAFQEISP+ISLDDL++NKKDLDEVLMFK+THTL+L++ S VEA SSHKSHKIEV + KR S KTVTFRT+TEAEMN+T+ EITDCI RGGMQ A GR ST SRSSFGS + GS+K PP E
Sbjct: 1 MEPSIEKELPRADLAKVEEFESKRSGYFADEYRKSSMYWSSLCDVMSANDGPTQQVLSYVAGKLEADRINTAAIFVNADKVFGEKKGATKLRHDKIRHEEQKAKTKGVTASIDVELLVAGGPGKEA---PTNSAVKAIWEMAEMDCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQVGGKTLHEDVWFLFCSYQTAVVHQKEAWNAVTAKLGEVFAKMKDLEGERRTTLREFMLSANHAIGDNWKKMCTLSGPANDAAKAVDASRGAVDQEVHSLAAVRMEEKKHDSSKEHILANTTHIVRADPAPADDSFIETLSAPLESPLVRSMMMIERREGKAIGSKYHAGLMVLSWDGFLHFFDIPSSSTVKKDASASAAFQEISPSISLDDLLANKKDLDEVLMFKSTHTLRLDESSTVEAKSSHKSHKIEVKGKMNITSIKRHFGSSSKTVTFRTATEAEMNNTVEEITDCIYTRGGMQT-------ALTGRMSTDSRSSFGSSFNSTGSGSTKLPPKE 544
BLAST of mRNA_H-canaliculatus_F_contig1085.800.1 vs. uniprot
Match: A0A6H5L7U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7U6_9PHAE) HSP 1 Score: 679 bits (1753), Expect = 9.940e-230 Identity = 374/550 (68.00%), Postives = 430/550 (78.18%), Query Frame = 1
Query: 205 MHPDIEAELPRADLNKIEEFESKRSGYFADEYRKSSLYWSSLCDVMRDNDGSTQQLLTYVAGKLETDRAYSAAIYANADKIFGDKKGAAKLRHEKIRAAEMKGKAAGNEPSLPEDAMIAGGGGRDAADLPQNSAVQAIWEMTEMDCRAARQRDTLCEEMEAEDRLGTVKAMGKEMHRRFKELSDEGTSCLVSLTNIDKRVGQAFLHLKERLGDQLGGKTLHEDVWLLDCAYRTAAVHQKEAWDAVTAKLKEVFNKMKDLEGERRRVLREFLISTNEGICDSWRKLPALCEPAIAAANAVDASRSAVDREVATTAADGVEEKLSE--KEHELANTSSIVYADPLPSDSSFIDNLTAPLDSPLVRFMTMVERREGKTIGSKYHPGLMVLSWDGFIHFFDMPSGSNVKQDASPSAAFQEISPTISLDDLMSNKKDLDEVLMFKTTHTLQLNDHSLVEAVSSHKSHKIEVSRPSTRATQKRTLLSG--HKTVTFRTSTEAEMNHTLAEITDCICVRGGMQDKDGKPNPATMGRQSTGSRSSFGS-YHSDGSSKT 1839
M P IE ELPRADL +IEEFESKRSGYFADEYRKSS+YWSSLCDVM NDG TQQ+L+YVAGKLE DR +AAI+ANADK+F +KKGA KLRH+KIR E K K G S+ + ++AGG ++A P N+AV+AIWEM EMDCRAAR RD LC+E+E ED LG VK MGKEM RRFKELS+EGT+CL+SL NIDKRVGQAFLHLKE LGDQ+GGKTLHEDVW L C+Y+TA VHQKEAWDAVTAKL EVF KMK+LEGERR LREF++S N I D+W+ L L PA AA AVDA+R AVD+EV + AA +EEK E KEH LANT+ IV ADP P+D SFI+ L+APL+SPLVR M M+ERREGK IGSKY+ GLMVLSWDGF+HFFD+PS S VK+DAS SAAFQEISP+ISLDDL++NKKDLDEVLMFK+THTL ++ S VEA SSHKSHKIEV + + KR SG KTVTFRT+TEAEMN+ + EITDCI RGGMQ A GR ST SRSSFGS + S GS T
Sbjct: 1 MEPSIEKELPRADLAEIEEFESKRSGYFADEYRKSSMYWSSLCDVMSLNDGPTQQVLSYVAGKLEADRVNTAAIFANADKLFDEKKGATKLRHDKIRHEEQKAKTKGVTASIDVELLVAGGPEKEA---PTNNAVKAIWEMAEMDCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQVGGKTLHEDVWFLFCSYQTAVVHQKEAWDAVTAKLGEVFAKMKNLEGERRTTLREFMLSANRAIGDNWKTLCTLPGPASDAATAVDANRGAVDQEVHSLAAVRMEEKKHETSKEHVLANTTHIVRADPAPADDSFIETLSAPLESPLVRKMMMIERREGKAIGSKYYAGLMVLSWDGFLHFFDIPSSSTVKRDASASAAFQEISPSISLDDLLANKKDLDEVLMFKSTHTLWFDESSTVEAKSSHKSHKIEVKGRTNITSIKRHFGSGTTSKTVTFRTATEAEMNNIVEEITDCIYTRGGMQT-------AVTGRMSTDSRSSFGSSFSSTGSGST 540
BLAST of mRNA_H-canaliculatus_F_contig1085.800.1 vs. uniprot
Match: A0A6H5KEN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN9_9PHAE) HSP 1 Score: 121 bits (303), Expect = 8.030e-25 Identity = 90/316 (28.48%), Postives = 151/316 (47.78%), Query Frame = 1
Query: 235 RADLNKIEEFESKRSGYFADEYRKSSLYWSSLCDVMRDNDGSTQQLLTYVAGKLETDRAYSAAIYANADKIFGDKKGAAKLRHEKIRAAEMKGKAAGNEPSLPEDAMIAGGGGRDAADLPQN--SAVQAIWEMTEMDCRAARQRDTLCEEMEAEDRLGTVKAMGKEMHRRFKELSDEGTSCLVSLTNIDKRVGQAFLHLKERLGDQLGGK----------TLHE----DVWLLDCAYRTAAVHQKEAWDAVTAKLKEVFNKMKDLEGERRRVLREFLISTNEGICDSWRKLPALCEPAIAAANAVDASRSAVDREV 1134
R L++ FE +R +F ++Y SLYW +++R + + ++ ++Y KL AY+ ++YA D++ + G + EK R K + LP G G DA LP SA+ ++EM E A + +C+E + AM K++ RF E+ +GT+CL + + + +A+ +E + L + TL + D+WL D YR A Q W V+AKL ++F KMKD+E ERR+ ++ L + + WR LPAL +P + + ++ R +D+EV
Sbjct: 133 RKALDETRTFEQRRHSHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLSATHAYAKSLYAIRDRVDSLEPGTTEALREKERRKNNHKKWPPQQLPLPPQQRR--GSGTDAGGLPPQPASALDCLFEMEEW---TAMRTIDMCQEAHVTVIDNQLNAMVKKLDERFAEMVGQGTACLRLMHSAEMNSVKAYGRYQEIVTASLEREASPARATAPLTLRDVAGSDIWLADMNYRVAVTQQARVWKGVSAKLGDLFGKMKDIEVERRKAIQGGLTAMVQLQDALWRDLPALKDPVLHTLDRINVDRHLLDQEV 443
BLAST of mRNA_H-canaliculatus_F_contig1085.800.1 vs. uniprot
Match: D8LNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW9_ECTSI) HSP 1 Score: 109 bits (272), Expect = 1.230e-20 Identity = 99/346 (28.61%), Postives = 159/346 (45.95%), Query Frame = 1
Query: 565 GGGRDAADLPQN--SAVQAIWEMTEMDCRAARQRDTLCEEMEAEDRLGTVKAMGKEMHRRFKELSDEGTSCLVSLTNIDKRVGQAFLHLKERLGDQLGGK----------TLHE----DVWLLDCAYRTAAVHQKEAWDAVTAKLKEVFNKMKDLEGERRRVLREFLISTNEGICDSWRKLPALCEPAIAAANAVDASRSAVDREVATTAADGVEEKLSEKEHELANT------------------------------SSIVYADPLPSDSSFIDNLTAPLDSPLVRFMTMVERREGKTIGSKYHPGLMVLSWDGFIHFFDMPSGS--NVKQ-DASPSAAFQEISP 1455
G G D LP SA+ ++EM E A + +C+E + AM K++ RF E+ +GT+CL + + + +A+ +E + LG + TL + DVWL D YR A Q W V+AKL ++F +MKD+E ERR+ ++ L + + WR LPAL EP + + ++ R +D+EV G L+ ++ A S+ ++ +P+D F+ L +PL S L+ TM+ERRE I S++ L +L+ D ++ FD+P G+ + KQ +A S AF E+ P
Sbjct: 199 GSGTDGGGLPPQPASALDCLFEMEEY---TAMRTIDMCQEAHVTVIDKQLNAMVKKLDDRFAEMVGQGTACLRLMHSAEMNSAKAYGRYQEVVTASLGREASPARATAPLTLRDVAGSDVWLADMNYRVAVTQQARVWKGVSAKLGDLFGRMKDIEVERRKAIQGGLTAMVQLQDALWRDLPALKEPVVHTLDRINVDRHLLDQEVRQQMRVGAARLLAGRQENGAGXXXXXXXXXXXXXXPAGXXXXXXXXXXXXGGGSVERSETMPAD--FLAGLESPLASSLIARSTMLERREKAMIASRWILVLAILTHDSYLLLFDVPRGTAAHKKQLNARTSEAFAELVP 539
BLAST of mRNA_H-canaliculatus_F_contig1085.800.1 vs. uniprot
Match: A0A7S1FLP4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FLP4_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 9.180e-6 Identity = 54/200 (27.00%), Postives = 89/200 (44.50%), Query Frame = 1
Query: 886 DCAYRTAAVHQKEAWDAVTAKLKEVFNKMKDLEGERRRVLREFLIS--TNEGICDSWRKLPALCEPAIAAANAVDASRSAVDREVATTAADGVEE-KLSEKEHELANTSSIVYADPLPSDSSFIDN-----LTAPLDSPLVRFMTMVERREGKTIGSKYHPGLMVLSWDGFIHFFDMPSGSNVKQDASPSAAFQEISPTI 1461
D YR + W+ A L +F +MK+ E RRRVLR + + +G+ W + + +AS V+REV E +L E+E+ + +PS+ F D L +PL S L+ ++ER+ G+ K L +++ D F+H FDMP+ S ++ + AFQ + P +
Sbjct: 1 DMRYRMSVAFLSACWEKCQAALAAIFLRMKEDECRRRRVLRAAVAAFLRQQGVL--WEGVRDAFAEGVPDRALQEASPEEVEREVQAAIRRRAREIRLQEQENGEEEPLPVAT---VPSEDEFTDEDRVIELDSPLTSKLLGKAKVIERKPGRLAAWK--TTLAIVTTDSFLHLFDMPAFSGIRNGTATEVAFQRLVPKL 193 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1085.800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1085.800.1 >prot_H-canaliculatus_F_contig1085.800.1 ID=prot_H-canaliculatus_F_contig1085.800.1|Name=mRNA_H-canaliculatus_F_contig1085.800.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=609bp MHPDIEAELPRADLNKIEEFESKRSGYFADEYRKSSLYWSSLCDVMRDNDback to top mRNA from alignment at H-canaliculatus_F_contig1085:12755..27613- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1085.800.1 ID=mRNA_H-canaliculatus_F_contig1085.800.1|Name=mRNA_H-canaliculatus_F_contig1085.800.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=14859bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1085:12755..27613- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1085:12755..27613- >mRNA_H-canaliculatus_F_contig1085.800.1 ID=mRNA_H-canaliculatus_F_contig1085.800.1|Name=mRNA_H-canaliculatus_F_contig1085.800.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3654bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1085:12755..27613- (Hapterophycus canaliculatus Oshoro5f female)back to top |