mRNA_H-canaliculatus_F_contig1084.789.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1084.789.1 vs. uniprot
Match: D8LJM2_ECTSI (PGPS/D6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM2_ECTSI) HSP 1 Score: 368 bits (944), Expect = 1.070e-124 Identity = 179/226 (79.20%), Postives = 200/226 (88.50%), Query Frame = 2 Query: 221 MNIFRFFGDMSHLSSILVLLLKLRASKSAAGVSLKTQELFFVVFVSRYVDLFFRFHSWYNSVMKVLYLSLTGLIIYMIREQKPIKSTYDKSQDSFLHWKFAVAPCVIVGFIIHTWDSWGTQNVFLSPVNYLWIFSQVLEPFTIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYLLNWVWRAYNENGYRHHVLLYFAGLVQTLLYADFFYYYAISKYYGGRMSLPA 898 MNIFR GDMSH +SIL+LLLKLRASKSAAG+SLKTQELF VVFV+RYVDLFFRF SWYNS+MKVLY++LT LIIYMIRE PIK+TYDKSQDSFLHW+FAVAPC +G +IH+W W F S +N+ W FS+VLEPF IVPQLMVLQRYREVENLTGHYVFLLGAYRSLY++NWV+RA+ E GY+HHVL+Y AGLVQTLLYADFFYYYAISKYYGGRMSLPA Sbjct: 1 MNIFRLAGDMSHTASILMLLLKLRASKSAAGISLKTQELFLVVFVTRYVDLFFRFISWYNSIMKVLYITLTSLIIYMIREHIPIKATYDKSQDSFLHWQFAVAPCAALGLLIHSWSWWTVSMPFSSLINFFWTFSEVLEPFAIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYIVNWVYRAHYEAGYQHHVLVYIAGLVQTLLYADFFYYYAISKYYGGRMSLPA 226
BLAST of mRNA_H-canaliculatus_F_contig1084.789.1 vs. uniprot
Match: A0A835Z6E1_9STRA (ER lumen protein retaining receptor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E1_9STRA) HSP 1 Score: 289 bits (739), Expect = 9.820e-94 Identity = 143/226 (63.27%), Postives = 179/226 (79.20%), Query Frame = 2 Query: 221 MNIFRFFGDMSHLSSILVLLLKLRASKSAAGVSLKTQELFFVVFVSRYVDLFFRFHSWYNSVMKVLYLSLTGLIIYMIREQKPIKSTYDKSQDSFLHWKFAVAPCVIVGFIIHTWDSWGTQNVFLSPVNYLWIFSQVLEPFTIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYLLNWVWRAYNENGYRHHVLLYFAGLVQTLLYADFFYYYAISKYYGGRMSLPA 898 MNIFR GD+ HL+SIL+LLLKLRASK+A+G+SLKTQELF VFV RY+DLF F+S YNSVMKVLY++LT LII+M+R Q PI+ TYD SQD+FLH K+AVAPC + + + +++F W FS LE IVPQL+VLQRYREVENLTGHY+F LGAYR+LY+LNW++R+++E GY+HH ++YFAG+VQT LY DFFYYYAISKY GG+ SLP+ Sbjct: 1 MNIFRLVGDLCHLASILLLLLKLRASKNASGISLKTQELFLAVFVCRYLDLFTTFYSVYNSVMKVLYIALTALIIHMMRAQSPIRGTYDASQDTFLHVKYAVAPCAALAALTMLVQGFDVRDLF-------WNFSIYLEAIAIVPQLIVLQRYREVENLTGHYIFFLGAYRALYILNWIYRSFHERGYKHHYVVYFAGIVQTALYVDFFYYYAISKYRGGKFSLPS 219
BLAST of mRNA_H-canaliculatus_F_contig1084.789.1 vs. uniprot
Match: F0YI66_AURAN (Uncharacterized protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI66_AURAN) HSP 1 Score: 281 bits (720), Expect = 7.570e-91 Identity = 143/225 (63.56%), Postives = 175/225 (77.78%), Query Frame = 2 Query: 221 MNIFRFFGDMSHLSSILVLLLKLRASKSAAGVSLKTQELFFVVFVSRYVDLFFRFHSWYNSVMKVLYLSLTGLIIYMIREQKPIKSTYDKSQDSFLHWKFAVAPCVIVGFIIHTWDSWGTQNVFLSPVNYLWIFSQVLEPFTIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYLLNWVWRAYNENGYRHHVLLYFAGLVQTLLYADFFYYYAISKYYGGRMSLP 895 MN+FRF GDMSH+ SI+VL+L+LR SKSA G+SLKTQELF +VF++RY+DLF F+S YNS MKV Y++ T IIYMIR ++P KS YDKSQDSFLH+KFAVAPC ++ S + L+PV+ LW FS LE IVPQL VLQRYREVENLTGHYVF LGAYR LY+LNWV+R+Y E YRH+ L+Y +G +QT LY DFFYYY +SKYYGG+++LP Sbjct: 1 MNLFRFAGDMSHVVSIIVLILRLRVSKSAVGISLKTQELFLIVFMTRYLDLFTTFYSMYNSFMKVAYITATASIIYMIRFKEPYKSKYDKSQDSFLHFKFAVAPCAMLALF-----SCLIKRE-LNPVDVLWTFSIFLEALAIVPQLFVLQRYREVENLTGHYVFFLGAYRFLYILNWVYRSYYEPFYRHNWLVYISGAIQTALYVDFFYYYIVSKYYGGKLTLP 219
BLAST of mRNA_H-canaliculatus_F_contig1084.789.1 vs. uniprot
Match: A0A7S2MV43_9STRA (ER lumen protein-retaining receptor n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MV43_9STRA) HSP 1 Score: 281 bits (720), Expect = 9.940e-91 Identity = 140/226 (61.95%), Postives = 175/226 (77.43%), Query Frame = 2 Query: 218 TMNIFRFFGDMSHLSSILVLLLKLRASKSAAGVSLKTQELFFVVFVSRYVDLFFRFHSWYNSVMKVLYLSLTGLIIYMIREQKPIKSTYDKSQDSFLHWKFAVAPCVIVGFIIHTWDSWGTQNVFLSPVNYLWIFSQVLEPFTIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYLLNWVWRAYNENGYRHHVLLYFAGLVQTLLYADFFYYYAISKYYGGRMSLP 895 +MNIFR GDMSH+ SI+VLLL+LR +K+A G+S++T ELF VVFV+RY+DLF F+S YNS MK+LY+ T IIYMIR +PI STYDK+QD+FLHWKFAV PC I+ I H S + +SP+ LW FS LE I+PQL+VLQRYREVENLTG+Y+F +GAYR+LY+LNWV+RAY E Y+HH ++YF G++QTLLYADFFYYY SK GG+ SLP Sbjct: 2 SMNIFRLSGDMSHVFSIIVLLLRLRVAKNAQGISVRTHELFLVVFVTRYLDLFTTFYSLYNSCMKILYIVTTAAIIYMIRFSEPICSTYDKAQDTFLHWKFAVLPCAIIATITHMIGS----GLSISPIELLWTFSIYLESVAILPQLIVLQRYREVENLTGNYIFFMGAYRALYILNWVYRAYYEPFYQHHFVVYFCGVLQTLLYADFFYYYVKSKAKGGKFSLP 223
BLAST of mRNA_H-canaliculatus_F_contig1084.789.1 vs. uniprot
Match: A0A7S3ZPQ8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPQ8_9STRA) HSP 1 Score: 284 bits (726), Expect = 1.080e-90 Identity = 149/228 (65.35%), Postives = 174/228 (76.32%), Query Frame = 2 Query: 212 AGTMNIFRFFGDMSHLSSILVLLLKLRASKSAAGVSLKTQELFFVVFVSRYVDLFFRFHSWYNSVMKVLYLSLTGLIIYMIREQKPIKSTYDKSQDSFLHWKFAVAPCVIVGFIIHTWDSWGTQNVFLSPVNYLWIFSQVLEPFTIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYLLNWVWRAYNENGYRHHVLLYFAGLVQTLLYADFFYYYAISKYYGGRMSLP 895 A MNIFRF GDMSH+ SILVLLL+LR+SKSA G+SLKTQELF +VFV+RY+DLF F+S YNS MKV Y++ T II+MIR Q+P KS YD SQDSFLH KFAVAPC G + G LSP++ LW FS LE IVPQL VLQRYREVENLTGHYVF LGAYR LY+LNWV+R+Y E YRH+ L+Y +G VQT LY DFFYYY +SKYYGG+++LP Sbjct: 71 AAKMNIFRFAGDMSHVVSILVLLLRLRSSKSAVGISLKTQELFLIVFVTRYLDLFTTFYSLYNSFMKVAYIASTTYIIWMIRFQEPYKSKYDASQDSFLHIKFAVAPCA--GLALFACLVKGE----LSPIDILWTFSIFLEALAIVPQLFVLQRYREVENLTGHYVFFLGAYRGLYILNWVYRSYYEQFYRHNWLVYVSGAVQTALYVDFFYYYVVSKYYGGKLTLP 292
BLAST of mRNA_H-canaliculatus_F_contig1084.789.1 vs. uniprot
Match: A0A7S2EAQ3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EAQ3_TRICV) HSP 1 Score: 282 bits (721), Expect = 2.970e-90 Identity = 138/226 (61.06%), Postives = 178/226 (78.76%), Query Frame = 2 Query: 218 TMNIFRFFGDMSHLSSILVLLLKLRASKSAAGVSLKTQELFFVVFVSRYVDLFFRFHSWYNSVMKVLYLSLTGLIIYMIREQKPIKSTYDKSQDSFLHWKFAVAPCVIVGFIIHTWDSWGTQNVFLSPVNYLWIFSQVLEPFTIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYLLNWVWRAYNENGYRHHVLLYFAGLVQTLLYADFFYYYAISKYYGGRMSLP 895 +MN+FR GDMSH+ SI++LLL+LR +++A G+SL+T ELF +VFV+RY+DLF F+S YNS MK+LY+ TG IIYMIR Q+PI STYDK+QD+FLHW+FAVAPC I+ I H S G +N L + LW FS LE I+PQL+VLQRYREVENLTG+Y+F +GAYR+ Y++NWVWRAY+E Y+HH ++YF G++QTLLYADFFYYY SK GG+ +LP Sbjct: 44 SMNLFRLSGDMSHVFSIIILLLRLRVARNAQGISLRTHELFLLVFVTRYLDLFTTFYSLYNSCMKILYIFTTGSIIYMIRFQEPICSTYDKAQDTFLHWRFAVAPCAIIATITHLIGS-GLKNFEL--LELLWTFSIYLEAIAILPQLIVLQRYREVENLTGNYIFFMGAYRAFYIVNWVWRAYHEPAYQHHFVVYFCGVLQTLLYADFFYYYVKSKSKGGKFTLP 266
BLAST of mRNA_H-canaliculatus_F_contig1084.789.1 vs. uniprot
Match: A0A7R9ZM06_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZM06_9STRA) HSP 1 Score: 281 bits (718), Expect = 8.710e-90 Identity = 135/226 (59.73%), Postives = 177/226 (78.32%), Query Frame = 2 Query: 218 TMNIFRFFGDMSHLSSILVLLLKLRASKSAAGVSLKTQELFFVVFVSRYVDLFFRFHSWYNSVMKVLYLSLTGLIIYMIREQKPIKSTYDKSQDSFLHWKFAVAPCVIVGFIIHTWDSWGTQNVFLSPVNYLWIFSQVLEPFTIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYLLNWVWRAYNENGYRHHVLLYFAGLVQTLLYADFFYYYAISKYYGGRMSLP 895 +MNIFRF GDMSHL SI+VLLL+LR +++A G+S+++ ELF VFV+RY+DLFFRF+S YNSVMK++Y+ T IIY I+ ++PIKSTYDKSQD+FLHW+FAVAPC I+ F H G + + LW+FS LE I+PQL+VLQRY+EVENLTG+Y+F +GAYR+LY+LNW++RA E GY+HH ++YF G++QTLLYADFFYYY +K G R+ LP Sbjct: 47 SMNIFRFLGDMSHLFSIIVLLLRLRVARNAQGISVRSHELFLCVFVTRYLDLFFRFYSIYNSVMKIIYIGSTASIIYTIKYKEPIKSTYDKSQDTFLHWRFAVAPCAIIAFATHMIAK-GMKG--FDAIELLWMFSIYLEAIAILPQLIVLQRYKEVENLTGNYIFFMGAYRALYILNWIYRANTEKGYKHHWVVYFCGVLQTLLYADFFYYYIKAKARGNRLQLP 269
BLAST of mRNA_H-canaliculatus_F_contig1084.789.1 vs. uniprot
Match: A0A7S1UWG6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWG6_9STRA) HSP 1 Score: 279 bits (714), Expect = 1.630e-89 Identity = 142/239 (59.41%), Postives = 182/239 (76.15%), Query Frame = 2 Query: 179 TDNERRSWLLAAGTMNIFRFFGDMSHLSSILVLLLKLRASKSAAGVSLKTQELFFVVFVSRYVDLFFRFHSWYNSVMKVLYLSLTGLIIYMIREQKPIKSTYDKSQDSFLHWKFAVAPCVIVGFIIHTWDSWGTQNVFLSPVNYLWIFSQVLEPFTIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYLLNWVWRAYNENGYRHHVLLYFAGLVQTLLYADFFYYYAISKYYGGRMSLP 895 T+ ER + + +MNIFR GDMSH+ SI+VLLL+LR +K+A G+S++T ELF VFV+RY+DLF F+S+YNS+MK+LY+ T IIY I+ Q+PIKSTYDK+QD+FLHWKFAVAPC IV F+ H S G L + LW FS LE I+PQL+VLQRYREVENLTG++VF +GAYR LY+LNW++RA+ E+GY+HH ++YF G++QTLLYADFFYYY S GGR LP Sbjct: 13 TNRERNAKM----SMNIFRLAGDMSHVFSIIVLLLRLRVAKNAQGISVRTHELFLCVFVTRYLDLFTTFYSFYNSIMKILYIGSTASIIYTIKFQEPIKSTYDKAQDTFLHWKFAVAPCAIVAFLTHMIGS-GIAKFEL--MELLWTFSIYLESIAILPQLIVLQRYREVENLTGNFVFFMGAYRFLYILNWIYRAHTEHGYKHHWVVYFCGVLQTLLYADFFYYYVKSVRSGGRFKLP 244
BLAST of mRNA_H-canaliculatus_F_contig1084.789.1 vs. uniprot
Match: B7G303_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G303_PHATC) HSP 1 Score: 278 bits (711), Expect = 2.200e-89 Identity = 138/226 (61.06%), Postives = 175/226 (77.43%), Query Frame = 2 Query: 218 TMNIFRFFGDMSHLSSILVLLLKLRASKSAAGVSLKTQELFFVVFVSRYVDLFFRFHSWYNSVMKVLYLSLTGLIIYMIREQKPIKSTYDKSQDSFLHWKFAVAPCVIVGFIIHTWDSWGTQNVFLSPVNYLWIFSQVLEPFTIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYLLNWVWRAYNENGYRHHVLLYFAGLVQTLLYADFFYYYAISKYYGGRMSLP 895 +MNIFR GDM H+ SI+VLLL+LR +K+A G+SL+T ELF +VFV+RY+DLFF F S YNSVMKVLY+ T I+Y IR ++PIKSTY+KSQD+FLHWKFAVAPC + I H G++ V LW FS LE I+PQL+VLQRYREVENLTG+Y+F +GAYR+LY++NW++RA+ E GY+HH ++YF G+VQTLLYADFFYYY SK GG+ +LP Sbjct: 2 SMNIFRLAGDMCHVFSIIVLLLRLRVAKNAQGISLRTNELFLLVFVTRYLDLFFNFFSIYNSVMKVLYIVSTASIVYTIRFKEPIKSTYEKSQDTFLHWKFAVAPCFAIALITHLI---GSKR--FDMVELLWTFSIYLESIAILPQLIVLQRYREVENLTGNYIFFMGAYRALYIVNWIYRAHTEKGYKHHWVVYFCGVVQTLLYADFFYYYLKSKSKGGKFTLP 222
BLAST of mRNA_H-canaliculatus_F_contig1084.789.1 vs. uniprot
Match: A0A7S4HZX9_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HZX9_9STRA) HSP 1 Score: 276 bits (707), Expect = 9.460e-89 Identity = 136/226 (60.18%), Postives = 177/226 (78.32%), Query Frame = 2 Query: 218 TMNIFRFFGDMSHLSSILVLLLKLRASKSAAGVSLKTQELFFVVFVSRYVDLFFRFHSWYNSVMKVLYLSLTGLIIYMIREQKPIKSTYDKSQDSFLHWKFAVAPCVIVGFIIHTWDSWGTQNVFLSPVNYLWIFSQVLEPFTIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYLLNWVWRAYNENGYRHHVLLYFAGLVQTLLYADFFYYYAISKYYGGRMSLP 895 +MN FR GDMSH+ SI++LLL+LR +K+A G+SL+T ELFFVVFV+RY+DLF F+S YNS MK+LY+ TG IIYMIR ++PI STYDK+QD+FLHW++AVAPC ++ I H S G + L + LW FS LE I+PQL+VLQRYREVENLTG+++F +GAYR+ Y+LNW+WR+Y+E Y+HH ++YF G++QTLLYADFFYYY SK GG+ SLP Sbjct: 2 SMNAFRLCGDMSHVFSIIILLLRLRVAKNAQGISLRTNELFFVVFVTRYLDLFTTFYSLYNSGMKILYIVTTGTIIYMIRFKEPICSTYDKAQDTFLHWRYAVAPCAVIATITHLIGS-GFRRFEL--LELLWTFSIYLESIAILPQLIVLQRYREVENLTGNFIFFMGAYRAFYILNWIWRSYHEPMYQHHFVVYFCGVLQTLLYADFFYYYFKSKTKGGKFSLP 224 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1084.789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1084.789.1 >prot_H-canaliculatus_F_contig1084.789.1 ID=prot_H-canaliculatus_F_contig1084.789.1|Name=mRNA_H-canaliculatus_F_contig1084.789.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=227bp MNIFRFFGDMSHLSSILVLLLKLRASKSAAGVSLKTQELFFVVFVSRYVDback to top mRNA from alignment at H-canaliculatus_F_contig1084:1386..9577+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1084.789.1 ID=mRNA_H-canaliculatus_F_contig1084.789.1|Name=mRNA_H-canaliculatus_F_contig1084.789.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8192bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1084:1386..9577+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1084:1386..9577+ >mRNA_H-canaliculatus_F_contig1084.789.1 ID=mRNA_H-canaliculatus_F_contig1084.789.1|Name=mRNA_H-canaliculatus_F_contig1084.789.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1362bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1084:1386..9577+ (Hapterophycus canaliculatus Oshoro5f female)back to top |