mRNA_H-canaliculatus_F_contig10830.786.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10830.786.1 vs. uniprot
Match: D7FZD1_ECTSI (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD1_ECTSI) HSP 1 Score: 210 bits (535), Expect = 3.300e-67 Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 1 Query: 1 QVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQQVDPSGAYFGWKATAIGKNFVNAKNFLEKRFSEEAELDDAVHTALLTMREGFEGEMTEKNIE 324 +VQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQ VDPSGAYFGWKATAIGKNFVNAKNFLEKRFSEEAELDDAVHTALLTMREGFEGEMTEKNIE Sbjct: 103 EVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQ-VDPSGAYFGWKATAIGKNFVNAKNFLEKRFSEEAELDDAVHTALLTMREGFEGEMTEKNIE 209
BLAST of mRNA_H-canaliculatus_F_contig10830.786.1 vs. uniprot
Match: A0A835Z0F7_9STRA (20S proteasome subunit alpha 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0F7_9STRA) HSP 1 Score: 192 bits (487), Expect = 7.770e-60 Identity = 94/108 (87.04%), Postives = 103/108 (95.37%), Query Frame = 1 Query: 1 QVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQQVDPSGAYFGWKATAIGKNFVNAKNFLEKRFSEEAELDDAVHTALLTMREGFEGEMTEKNIE 324 ++QPV QLVRDTAGVMQEYTQ GGVRPFGVSLLVAGYDDDGPQLYQ VDPSGAYFGWKA+AIGKNF+NAK+FLEKR+++E ELDDA+HTALLTMREGFEGEMTE NIE Sbjct: 103 ELQPVSQLVRDTAGVMQEYTQSGGVRPFGVSLLVAGYDDDGPQLYQ-VDPSGAYFGWKASAIGKNFLNAKSFLEKRYNDEMELDDAIHTALLTMREGFEGEMTEHNIE 209
BLAST of mRNA_H-canaliculatus_F_contig10830.786.1 vs. uniprot
Match: W7TKE3_9STRA (Proteasome subunit alpha type 2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKE3_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.070e-57 Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 1 Query: 7 QPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQQVDPSGAYFGWKATAIGKNFVNAKNFLEKRFSEEAELDDAVHTALLTMREGFEGEMTEKNIE 324 QPVGQLVRDTAGVMQE+TQ GGVRPFG+SLLVAGYDD+GPQL+Q VDPSGAYFGW+ATAIGKN VNAKNFLEKR++EE ELDDAVHTALLT+REGFEGEM E NIE Sbjct: 106 QPVGQLVRDTAGVMQEFTQSGGVRPFGLSLLVAGYDDNGPQLFQ-VDPSGAYFGWQATAIGKNHVNAKNFLEKRYNEEMELDDAVHTALLTLREGFEGEMNESNIE 210
BLAST of mRNA_H-canaliculatus_F_contig10830.786.1 vs. uniprot
Match: A0A7S1BSA3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BSA3_9STRA) HSP 1 Score: 184 bits (467), Expect = 8.410e-57 Identity = 89/108 (82.41%), Postives = 99/108 (91.67%), Query Frame = 1 Query: 1 QVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQQVDPSGAYFGWKATAIGKNFVNAKNFLEKRFSEEAELDDAVHTALLTMREGFEGEMTEKNIE 324 +VQPVG LV+ TAGVMQEYTQ GGVRPFGVSLLVAGYDDDGP LYQ VDPSGAYFGW+ATAIGKN++NAKNFLEKR+ EE EL+DA+HTALLT+REGFEGEM +NIE Sbjct: 103 EVQPVGALVKQTAGVMQEYTQSGGVRPFGVSLLVAGYDDDGPHLYQ-VDPSGAYFGWRATAIGKNYINAKNFLEKRYQEEMELEDAIHTALLTLREGFEGEMNGRNIE 209
BLAST of mRNA_H-canaliculatus_F_contig10830.786.1 vs. uniprot
Match: A0A6U1Q5Y5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q5Y5_9STRA) HSP 1 Score: 182 bits (462), Expect = 1.330e-56 Identity = 90/108 (83.33%), Postives = 99/108 (91.67%), Query Frame = 1 Query: 1 QVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQQVDPSGAYFGWKATAIGKNFVNAKNFLEKRFSEEAELDDAVHTALLTMREGFEGEMTEKNIE 324 +VQPV QLV++ AGVMQE+TQ GGVRPFGVSLLVAGYDDDGPQL+Q VDPSGAYFGWKA+AIGK +VNAKNFLEKR+SE+ ELDDAVHTALLTMRE FEGEM E NIE Sbjct: 61 EVQPVAQLVKEMAGVMQEFTQSGGVRPFGVSLLVAGYDDDGPQLFQ-VDPSGAYFGWKASAIGKGYVNAKNFLEKRYSEDMELDDAVHTALLTMRESFEGEMNENNIE 167
BLAST of mRNA_H-canaliculatus_F_contig10830.786.1 vs. uniprot
Match: A0A7S0C5Z3_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C5Z3_9STRA) HSP 1 Score: 174 bits (442), Expect = 5.670e-53 Identity = 88/107 (82.24%), Postives = 96/107 (89.72%), Query Frame = 1 Query: 7 QPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDG-PQLYQQVDPSGAYFGWKATAIGKNFVNAKNFLEKRFSEEAELDDAVHTALLTMREGFEGEMTEKNIE 324 QPV QLV+ TAGVMQEYTQ GGVRPFGVSLLVAG D DG P+LYQ VDPSGAYFGWKATAIGKN VNAKNFLEKR+ E+ EL+DA+HTALLT+REGFEGEMT +NIE Sbjct: 105 QPVSQLVKQTAGVMQEYTQSGGVRPFGVSLLVAGMDSDGEPRLYQ-VDPSGAYFGWKATAIGKNHVNAKNFLEKRYQEDVELEDAIHTALLTLREGFEGEMTSRNIE 210
BLAST of mRNA_H-canaliculatus_F_contig10830.786.1 vs. uniprot
Match: A0A7S1ZX62_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZX62_TRICV) HSP 1 Score: 174 bits (440), Expect = 1.110e-52 Identity = 88/107 (82.24%), Postives = 97/107 (90.65%), Query Frame = 1 Query: 7 QPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDG-PQLYQQVDPSGAYFGWKATAIGKNFVNAKNFLEKRFSEEAELDDAVHTALLTMREGFEGEMTEKNIE 324 QPV QLV+ TA VMQEYTQ GGVRPFGVSLLVAG D DG P+LYQ VDPSGAYFGWKATAIGKN+VNAKNFLEKR++++ EL+DAVHTALLT+REGFEGEMT KNIE Sbjct: 105 QPVSQLVKSTASVMQEYTQSGGVRPFGVSLLVAGVDGDGTPRLYQ-VDPSGAYFGWKATAIGKNYVNAKNFLEKRYTDDMELEDAVHTALLTLREGFEGEMTSKNIE 210
BLAST of mRNA_H-canaliculatus_F_contig10830.786.1 vs. uniprot
Match: A0A7S2BD82_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BD82_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.100e-52 Identity = 84/106 (79.25%), Postives = 94/106 (88.68%), Query Frame = 1 Query: 7 QPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQQVDPSGAYFGWKATAIGKNFVNAKNFLEKRFSEEAELDDAVHTALLTMREGFEGEMTEKNIE 324 QP+ LV+DTA V QEYTQ GGVRPFGVSLLVAGYDDDGP L+Q VDPSGAYFGWKATAIGKNF NA++FLE+RF+EE EL+DA+H ALLTMREG+EGEM E NIE Sbjct: 105 QPIPMLVKDTASVCQEYTQAGGVRPFGVSLLVAGYDDDGPHLFQ-VDPSGAYFGWKATAIGKNFKNARSFLERRFNEEMELEDAIHNALLTMREGYEGEMNENNIE 209
BLAST of mRNA_H-canaliculatus_F_contig10830.786.1 vs. uniprot
Match: A0A8J2SQ24_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQ24_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.160e-52 Identity = 83/107 (77.57%), Postives = 98/107 (91.59%), Query Frame = 1 Query: 4 VQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQQVDPSGAYFGWKATAIGKNFVNAKNFLEKRFSEEAELDDAVHTALLTMREGFEGEMTEKNIE 324 ++PV LV+DTA VMQEYTQ GGVRPFG+SLLVAGYDD+GPQL+Q VDPSGAY+GWKA+AIGKNF NA++FLEKR++++ ELDDA+HTALLTMREGFEGEMTE IE Sbjct: 105 LKPVKALVQDTASVMQEYTQSGGVRPFGISLLVAGYDDEGPQLFQ-VDPSGAYYGWKASAIGKNFKNARSFLEKRYNDDVELDDAIHTALLTMREGFEGEMTEHTIE 210
BLAST of mRNA_H-canaliculatus_F_contig10830.786.1 vs. uniprot
Match: A0A7S4JHN8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JHN8_9STRA) HSP 1 Score: 171 bits (434), Expect = 2.240e-52 Identity = 87/106 (82.08%), Postives = 97/106 (91.51%), Query Frame = 1 Query: 10 PVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDG-PQLYQQVDPSGAYFGWKATAIGKNFVNAKNFLEKRFSEEAELDDAVHTALLTMREGFEGEMTEKNIE 324 PV QLV+ TAGVMQEYTQ GGVRPFGVSLLVAG D DG P+LYQ VDPSGAYFGWKATAIGKN+VNAKNFLEKR++++ EL+DAVHTALLT+REGFEGEMT +NIE Sbjct: 59 PVTQLVKSTAGVMQEYTQSGGVRPFGVSLLVAGTDADGTPRLYQ-VDPSGAYFGWKATAIGKNYVNAKNFLEKRYTDDMELEDAVHTALLTLREGFEGEMTSENIE 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10830.786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10830.786.1 >prot_H-canaliculatus_F_contig10830.786.1 ID=prot_H-canaliculatus_F_contig10830.786.1|Name=mRNA_H-canaliculatus_F_contig10830.786.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=108bp QVQPVGQLVRDTAGVMQEYTQRGGVRPFGVSLLVAGYDDDGPQLYQQVDPback to top mRNA from alignment at H-canaliculatus_F_contig10830:3087..4495- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10830.786.1 ID=mRNA_H-canaliculatus_F_contig10830.786.1|Name=mRNA_H-canaliculatus_F_contig10830.786.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1409bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10830:3087..4495- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10830:3087..4495- >mRNA_H-canaliculatus_F_contig10830.786.1 ID=mRNA_H-canaliculatus_F_contig10830.786.1|Name=mRNA_H-canaliculatus_F_contig10830.786.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=648bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10830:3087..4495- (Hapterophycus canaliculatus Oshoro5f female)back to top |